Homology
BLAST of Lsi06G013810 vs. ExPASy Swiss-Prot
Match:
Q0WN60 (Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H8 PE=2 SV=2)
HSP 1 Score: 1037.7 bits (2682), Expect = 8.4e-302
Identity = 506/956 (52.93%), Postives = 698/956 (73.01%), Query Frame = 0
Query: 51 STPKSSFSVSAQTQTHQSQSINPVSHLSLLEEICKLCEADDLNGAL----DFLQKAWKNN 110
S +SSF + S + +H L I CE DL+ + +F+ ++
Sbjct: 20 SRKESSFPRAVYNSNSISSNSTNANH--FLRRISNFCETGDLDKSFRTVQEFVGDDESSS 79
Query: 111 AAYDLVQRKEAMGVLLQKCGQHKDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGY 170
A+ LV +EA+G+LLQ G+ KD+E+GRK+ +++ S++ D VL TR+ITMY++CG
Sbjct: 80 DAFLLV--REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGS 139
Query: 171 PSDARLVFDRLQNKNLFQWNALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIK 230
P D+R VFD L++KNLFQWNA++S+Y RNELYDE + TFIE+IS T+ PD+FT PC+IK
Sbjct: 140 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIK 199
Query: 231 ACTGKCDVHLGQSVHGMAVKMGLIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLIS 290
AC G DV +G +VHG+ VK GL+ D+FVGNA++S YG +GFV +A+++FD MPERNL+S
Sbjct: 200 ACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVS 259
Query: 291 WNSLICGFSENGFWLEAYSAFRSLL-EGGDG-LIPDVATMVTLLPVCSGEGDVDMGMVIH 350
WNS+I FS+NGF E++ ++ E GDG +PDVAT+VT+LPVC+ E ++ +G +H
Sbjct: 260 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 319
Query: 351 GMAVKLGLVHELMVCNALVDMYSKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIY 410
G AVKL L EL++ NAL+DMYSKCGC++ A ++F+ NKNVVSWN+M+G +S EG +
Sbjct: 320 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 379
Query: 411 ETFELLRKMWMEEEMMEVNEVTILNLLPACLEETELLSLRALHGYSLRYSFQYDELINNA 470
TF++LR+M E ++ +EVTILN +P C E+ L SL+ LH YSL+ F Y+EL+ NA
Sbjct: 380 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 439
Query: 471 FIAAYAKCGSLIFAEHVFSEMKTKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPD 530
F+A+YAKCGSL +A+ VF +++K+V+SWNA+IGG+AQ+ DPR +LD + QM SG+LPD
Sbjct: 440 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 499
Query: 531 YFSIISILLACARLGHLQYGKEIHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFE 590
F++ S+L AC++L L+ GKE+HGF++RN LE D F+ +S+LSLY HC + + + F+
Sbjct: 500 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 559
Query: 591 RMGDKNLVCWNAMLSGYSQNELPNEALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGL 650
M DK+LV WN +++GY QN P+ AL +F QM+ G++ I+M+ + GACS L +L L
Sbjct: 560 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 619
Query: 651 GKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGV 710
G+E H + LK+ L +D F+ACSL+DMYAK+G + QS ++FNGL EK ASWN MI G+G+
Sbjct: 620 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 679
Query: 711 HGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELE 770
HG +A++LFEEM R+G PD TFLGVL AC H+GL+ EGL YL QM+S + L+P L+
Sbjct: 680 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 739
Query: 771 HYACVIDMLGRTGRLNEAFNLI-NEMPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLA 830
HYACVIDMLGR G+L++A ++ EM EE D IW SLLSS RI+ +LEMGEK A KL
Sbjct: 740 HYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 799
Query: 831 LEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGE 890
LE K ++YVLLSNLYA GKW+ VR VRQ+M ++SL+K AGCSWIE K++SF+ GE
Sbjct: 800 LE-PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 859
Query: 891 NSNSSSDEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLK 950
+EI+ +W+ LE +I ++GY PD+ V H+L E EKI+ L+GHSEKLA+++G +K
Sbjct: 860 RFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIK 919
Query: 951 TKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
T EGTT+R+ KNLRIC DCHNAAK ISK +REI++RDNKRFHHFKNG+CSCGD W
Sbjct: 920 TSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
BLAST of Lsi06G013810 vs. ExPASy Swiss-Prot
Match:
Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 623.6 bits (1607), Expect = 3.8e-177
Identity = 334/845 (39.53%), Postives = 511/845 (60.47%), Query Frame = 0
Query: 178 QNKNLFQWNALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLG 237
Q+++ W L+ + VR+ L EA+ T++++I V +PDN+ P L+KA D+ LG
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELG 117
Query: 238 QSVHGMAVKMGLIMD-LFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSE 297
+ +H K G +D + V N +++LY K G KVFD++ ERN +SWNSLI
Sbjct: 118 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 177
Query: 298 NGFWLEAYSAFRSLLEGGDGLIPDVATMVTLLPVCSG----EGDVDMGMVIHGMAVKLGL 357
W A AFR +L+ + + P T+V+++ CS EG + MG +H ++ G
Sbjct: 178 FEKWEMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRKGE 237
Query: 358 VHELMVCNALVDMYSKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRK 417
++ ++ N LV MY K G L+ + +L +++V+WN+++ + + + E E LR+
Sbjct: 238 LNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 297
Query: 418 MWMEEEMMEVNEVTILNLLPACLEETELLSLRALHGYSLRY-SFQYDELINNAFIAAYAK 477
M +E +E +E TI ++LPAC L + + LH Y+L+ S + + +A + Y
Sbjct: 298 MVLEG--VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 357
Query: 478 CGSLIFAEHVFSEMKTKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRS-GILPDYFSIIS 537
C ++ VF M + + WNA+I GY+QN ++AL + M S G+L + ++
Sbjct: 358 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 417
Query: 538 ILLACARLGHLQYGKEIHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKN 597
++ AC R G + IHGFV++ GL+ D F+ +L+ +Y K A F +M D++
Sbjct: 418 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 477
Query: 598 LVCWNAMLSGYSQNELPNEALSLFCQM------LSEG-----LEPDEIAMVSILGACSQL 657
LV WN M++GY +E +AL L +M +S+G L+P+ I +++IL +C+ L
Sbjct: 478 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 537
Query: 658 SALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMI 717
SAL GKE+H + +KN L D V +L+DMYAK GCL SR++F+ + +K V +WNV+I
Sbjct: 538 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 597
Query: 718 TGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKL 777
+G+HG G +A++L M+ G +P+ TF+ V AC H+G+V EGL M+ Y +
Sbjct: 598 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 657
Query: 778 EPELEHYACVIDMLGRTGRLNEAFNLINEMPEE-PDAKIWCSLLSSSRIYGDLEMGEKFA 837
EP +HYACV+D+LGR GR+ EA+ L+N MP + A W SLL +SRI+ +LE+GE A
Sbjct: 658 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 717
Query: 838 KKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYS 897
+ L+ LE N A YVLL+N+Y++AG WD VR+ MK+ ++K GCSWIE +++
Sbjct: 718 QNLIQLE-PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 777
Query: 898 FIAGENSNSSSDE----IRKMWNRLEKQIVEIGYTPDSSCVLHELEEVEKIKILKGHSEK 957
F+AG++S+ S++ + +W R+ K+ GY PD+SCVLH +EE EK +L GHSEK
Sbjct: 778 FVAGDSSHPQSEKLSGYLETLWERMRKE----GYVPDTSCVLHNVEEDEKEILLCGHSEK 837
Query: 958 LAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGLCS 1000
LAI+FG L T GT +R++KNLR+C DCH A KFISK REII+RD +RFH FKNG CS
Sbjct: 838 LAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCS 890
BLAST of Lsi06G013810 vs. ExPASy Swiss-Prot
Match:
Q9M1V3 (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 596.3 bits (1536), Expect = 6.5e-169
Identity = 323/888 (36.37%), Postives = 505/888 (56.87%), Query Frame = 0
Query: 116 EAMGVLLQKCGQHKDVEIGRKLDEMLCVS-SQFSGDFVLNTRLITMYSICGYPSDARLVF 175
EA +L+ CG+ + V GR+L + + F DF L +L+ MY CG DA VF
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDF-LAGKLVFMYGKCGSLDDAEKVF 140
Query: 176 DRLQNKNLFQWNALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDV 235
D + ++ F WN ++ AYV N A+ + + V + P L+KAC D+
Sbjct: 141 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNM-RVEGVPLGLSSFPALLKACAKLRDI 200
Query: 236 HLGQSVHGMAVKMGLIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPER-NLISWNSLICG 295
G +H + VK+G F+ NA++S+Y K + A ++FD E+ + + WNS++
Sbjct: 201 RSGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSS 260
Query: 296 FSENGFWLEAYSAFRSLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGL- 355
+S +G LE FR + G P+ T+V+ L C G +G IH +K
Sbjct: 261 YSTSGKSLETLELFREMHMTGPA--PNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTH 320
Query: 356 VHELMVCNALVDMYSKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRK 415
EL VCNAL+ MY++CG + QA + R++ N +VV+WNS+I Y + E E
Sbjct: 321 SSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSD 380
Query: 416 MWMEEEMMEVNEVTILNLLPACLEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKC 475
M + +EV++ +++ A + LL+ LH Y +++ + + + N I Y+KC
Sbjct: 381 MIAAGH--KSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKC 440
Query: 476 GSLIFAEHVFSEMKTKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISIL 535
+ F M K + SW +I GYAQN +AL+ + + + + D + SIL
Sbjct: 441 NLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSIL 500
Query: 536 LACARLGHLQYGKEIHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLV 595
A + L + KEIH +LR GL +D+ I L+ +Y C A FE + K++V
Sbjct: 501 RASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVV 560
Query: 596 CWNAMLSGYSQNELPNEALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFV 655
W +M+S + N +EA+ LF +M+ GL D +A++ IL A + LSAL G+E+HC++
Sbjct: 561 SWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYL 620
Query: 656 LKNCLIEDNFVACSLMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAV 715
L+ + +A +++DMYA G L ++ +F+ + K + + MI +G+HG G AV
Sbjct: 621 LRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAV 680
Query: 716 ELFEEMLRSGKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDM 775
ELF++M PD +FL +L AC HAGL+ EG +L M+ Y+LEP EHY C++DM
Sbjct: 681 ELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDM 740
Query: 776 LGRTGRLNEAFNLINEMPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADS 835
LGR + EAF + M EP A++WC+LL++ R + + E+GE A++LL LE N +
Sbjct: 741 LGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPG-N 800
Query: 836 YVLLSNLYATAGKWDHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEI 895
VL+SN++A G+W+ V VR KMK ++K GCSWIE GK++ F A + S+ S EI
Sbjct: 801 LVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEI 860
Query: 896 RKMWNRLEKQIV-EIGYTPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLR 955
+ + + +++ E+GY D+ VLH ++E EK+++L GHSE++AI++G L+T + LR
Sbjct: 861 YEKLSEVTRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLR 920
Query: 956 ISKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
I+KNLR+CRDCH K +SK +R+I++RD RFHHF++GLCSCGD W
Sbjct: 921 ITKNLRVCRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
BLAST of Lsi06G013810 vs. ExPASy Swiss-Prot
Match:
Q9SS60 (Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H23 PE=2 SV=1)
HSP 1 Score: 576.2 bits (1484), Expect = 7.0e-163
Identity = 307/855 (35.91%), Postives = 494/855 (57.78%), Query Frame = 0
Query: 148 SGDFVLNTRLITMYSICGYPSDARLVFDRLQ-NKNLFQWNALVSAYVRNELYDEAIHTFI 207
S DF + +LI YS P+ + VF R+ KN++ WN+++ A+ +N L+ EA+ F
Sbjct: 37 SSDF-FSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE-FY 96
Query: 208 ELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMGLIMDLFVGNAMISLYGKY 267
+ ++ PD +T P +IKAC G D +G V+ + MG DLFVGNA++ +Y +
Sbjct: 97 GKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRM 156
Query: 268 GFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGGDGLIPDVATMVT 327
G + A +VFD+MP R+L+SWNSLI G+S +G++ EA + L ++PD T+ +
Sbjct: 157 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL--KNSWIVPDSFTVSS 216
Query: 328 LLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQAVILFRKIENKN 387
+LP V G +HG A+K G+ ++V N LV MY K + A +F +++ ++
Sbjct: 217 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 276
Query: 388 VVSWNSMIGAYSREGFIYETFELLRKMWMEE-EMMEVNEVTILNLLPACLEETELLSLRA 447
VS+N+MI Y + + E+ +M++E + + + +T+ ++L AC +L +
Sbjct: 277 SVSYNTMICGYLKLEMVEESV----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKY 336
Query: 448 LHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTKSVSSWNAIIGGYAQNGD 507
++ Y L+ F + + N I YAKCG +I A VF+ M+ K SWN+II GY Q+GD
Sbjct: 337 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 396
Query: 508 PRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIHGFVLRNGLEIDSFIAVS 567
+A+ + M D+ + + ++ RL L++GK +H +++G+ ID ++ +
Sbjct: 397 LMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNA 456
Query: 568 LLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPNEALSLFCQMLSEGLEPD 627
L+ +Y C + + F MG + V WN ++S + L + QM + PD
Sbjct: 457 LIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPD 516
Query: 628 EIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQSRRIFN 687
+ L C+ L+A LGKE+HC +L+ + + +L++MY+K GCL S R+F
Sbjct: 517 MATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFE 576
Query: 688 GLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHAGLVSE 747
++ ++V +W MI +G++G+G KA+E F +M +SG PD F+ ++ AC H+GLV E
Sbjct: 577 RMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDE 636
Query: 748 GLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINEMPEEPDAKIWCSLLSSS 807
GL +M++ YK++P +EHYACV+D+L R+ ++++A I MP +PDA IW S+L +
Sbjct: 637 GLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC 696
Query: 808 RIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLSLQKAA 867
R GD+E E+ +++++ L + S +L SN YA KWD V ++R+ +KD + K
Sbjct: 697 RTSGDMETAERVSRRIIELNPDDPGYS-ILASNAYAALRKWDKVSLIRKSLKDKHITKNP 756
Query: 868 GCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEIGYTPDSSCVLHEL-EEVEK 927
G SWIE ++ F +G++S S+ I K L + + GY PD V L EE EK
Sbjct: 757 GYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEK 816
Query: 928 IKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIRDNKR 987
+++ GHSE+LAI+FG L T+ GT L++ KNLR+C DCH K ISK REI++RD R
Sbjct: 817 RRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANR 876
Query: 988 FHHFKNGLCSCGDCW 1000
FH FK+G CSC D W
Sbjct: 877 FHLFKDGTCSCKDRW 882
BLAST of Lsi06G013810 vs. ExPASy Swiss-Prot
Match:
Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)
HSP 1 Score: 564.3 bits (1453), Expect = 2.7e-159
Identity = 313/919 (34.06%), Postives = 494/919 (53.75%), Query Frame = 0
Query: 82 EICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCGQHKDVEIGRKLDEML 141
++ + CE+ +L A+ L + K +D+ R + +LQ C K ++ G+++D +
Sbjct: 67 QLRRFCESGNLENAVKLLCVSGK----WDIDPR--TLCSVLQLCADSKSLKDGKEVDNFI 126
Query: 142 CVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWNALVSAYVRNELYDEA 201
+ F D L ++L MY+ CG +A VFD ++ + WN L++ ++ + +
Sbjct: 127 -RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGS 186
Query: 202 IHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMGLIMDLFVGNAMIS 261
I F +++S + + D++T C+ K+ + VH G+ +HG +K G VGN++++
Sbjct: 187 IGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVA 246
Query: 262 LYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGGDGLIPDV 321
Y K VD A KVFD+M ER++ISWNS+I G+ NG + S F +L G + D+
Sbjct: 247 FYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DL 306
Query: 322 ATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQAVILFRK 381
AT+V++ C+ + +G +H + VK E CN L+DMYSKCG L A +FR+
Sbjct: 307 ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 366
Query: 382 IENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVTILNLLPACLEETELL 441
+ +++VVS+ SMI Y+REG E +L + MEEE
Sbjct: 367 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEE--MEEE----------------------- 426
Query: 442 SLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTKSVSSWNAIIGGYA 501
Sbjct: 427 ------------------------------------------------------------ 486
Query: 502 QNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIHGFVLRNGLEIDSF 561
GI PD +++ ++L CAR L GK +H ++ N L D F
Sbjct: 487 ------------------GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 546
Query: 562 IAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPNEALSLFCQMLSE- 621
++ +L+ +Y C A F M K+++ WN ++ GYS+N NEALSLF +L E
Sbjct: 547 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 606
Query: 622 GLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQS 681
PDE + +L AC+ LSA G+E+H ++++N D VA SL+DMYAK G L +
Sbjct: 607 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 666
Query: 682 RRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHA 741
+F+ + K++ SW VMI G+G+HG G +A+ LF +M ++G + D +F+ +L AC H+
Sbjct: 667 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 726
Query: 742 GLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINEMPEEPDAKIWCS 801
GLV EG + M+ K+EP +EHYAC++DML RTG L +A+ I MP PDA IW +
Sbjct: 727 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 786
Query: 802 LLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLS 861
LL RI+ D+++ EK A+K+ LE N YVL++N+YA A KW+ V+ +R+++
Sbjct: 787 LLCGCRIHHDVKLAEKVAEKVFELEPEN-TGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 846
Query: 862 LQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEIGYTPDSSCVLHELE 921
L+K GCSWIE +G++ F+AG++SN ++ I ++ +++E GY+P + L + E
Sbjct: 847 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAE 871
Query: 922 EVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIR 981
E+EK + L GHSEKLA++ G + + G +R++KNLR+C DCH AKF+SK +REI++R
Sbjct: 907 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 871
Query: 982 DNKRFHHFKNGLCSCGDCW 1000
D+ RFH FK+G CSC W
Sbjct: 967 DSNRFHQFKDGHCSCRGFW 871
BLAST of Lsi06G013810 vs. ExPASy TrEMBL
Match:
A0A0A0LPM0 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G015040 PE=3 SV=1)
HSP 1 Score: 1735.7 bits (4494), Expect = 0.0e+00
Identity = 863/991 (87.08%), Postives = 916/991 (92.43%), Query Frame = 0
Query: 16 MAAVAPPFSCRHRPLTIYKPTPTTT------SILKNSLPSTSTPKSS-FSVSAQTQTHQS 75
MA VAP FS HR +YKPTPT T SILKNSL STSTPKSS F VSA+TQ+HQS
Sbjct: 1 MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60
Query: 76 QSINPVSHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCGQH 135
+S+NPVS LSLLEEI KLCEA DLNGALDFLQ+AWKNNA YDL QRKEAMG+LLQKCGQ+
Sbjct: 61 RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
Query: 136 KDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWNAL 195
K+VEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYP ++RLVFDRL NKNLFQWNAL
Sbjct: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
Query: 196 VSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMG 255
VS YVRNELYDEAIHTF+ELISVTEFQPDNFT PCLIKACTGKCD+HLG+SVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
Query: 256 LIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFR 315
LIMDLFVGNAMI+LYGK GF+DEA+++FDKMPE+NLISWNSLI GFSENGFWLEAY AFR
Sbjct: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
Query: 316 SLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSK 375
SLLE GDGLIPDVATMVTLLPVCSGEG+VD+GMVIHGMAVKLGLVHELMVCNAL+DMYSK
Sbjct: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
Query: 376 CGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVTIL 435
CGCLS+A ILFRKIENK+VVSWNSMIGAYSREGF++ETF+LLRKMWMEEE+MEVNEVTIL
Sbjct: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
Query: 436 NLLPACLEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTK 495
NLLPACLEE+ELLSLRALHGYSLR+SFQY ELINNAFIAAYAKCGSL+FAEHVF M TK
Sbjct: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
Query: 496 SVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIH 555
SVSSWNA+IGG+AQNGDP KALDFYF+MTR GILPD FSI+S+LLAC RLG LQYGKEIH
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
Query: 556 GFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPN 615
GFVLRNGLE++SF+AVSLLSLYFHCSKP RTYFE MGDKN VCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
Query: 616 EALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLM 675
EALSLF QMLS+GLEPDEIA+ SILGACSQLSALGLGKEVHCF LKN L+EDNFVACSLM
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
Query: 676 DMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRF 735
DMYAKSG LG S+RIFN LN KEVASWNVMITGFGVHGQGNKAVELFE+M RS KQPDRF
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
Query: 736 TFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINE 795
TFLGVLQACCHAGLVSEGL YLAQMQ+LYKLEPELEHYACVIDMLGR GRLNEA N INE
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
Query: 796 MPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDH 855
MPEEPDAKIW SLLSSS Y DLEMGEKFA+KLLALE ANKADSY+LLSNLYATAGKWD
Sbjct: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALE-ANKADSYILLSNLYATAGKWDV 840
Query: 856 VRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEIGY 915
VRMVRQKMKDLSLQK GCSWIE RGK+YSFIAGENSN SSDEIRKMWNRLEKQIVEIGY
Sbjct: 841 VRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGY 900
Query: 916 TPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKF 975
TPD SCVLHELEEVEK KILKGHSEK+AI FGFL TKEGTTLRISKNLRICRDCHNAAK+
Sbjct: 901 TPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKY 960
Query: 976 ISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
ISKAAKREI+IRDNKRFHHFK G+CSCGD W
Sbjct: 961 ISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
BLAST of Lsi06G013810 vs. ExPASy TrEMBL
Match:
A0A5A7US76 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003290 PE=3 SV=1)
HSP 1 Score: 1733.4 bits (4488), Expect = 0.0e+00
Identity = 861/993 (86.71%), Postives = 913/993 (91.94%), Query Frame = 0
Query: 16 MAAVAPPFSCRHRPLTIYKPTPTTT--------SILKNSLPSTSTPKSS-FSVSAQTQTH 75
MA VAP FS RHR +YKPTPT T SI KNSL STSTPKSS F VS +TQTH
Sbjct: 1 MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60
Query: 76 QSQSINPVSHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCG 135
QS+SINPVS LSLLEEI KLCEA DLNGALDFLQ+AWKNNA YDL QRKEAMG LLQKCG
Sbjct: 61 QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120
Query: 136 QHKDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWN 195
Q+K+VEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYP ++RLVFDRLQNKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180
Query: 196 ALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVK 255
ALVS YVRN+LYDEAIHTFIELISVTEFQPDNFT PCLIKACTGKCDVHLG+SVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240
Query: 256 MGLIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSA 315
MGLIMDLFVGNAMISLYGK GF+DEA++VFDKMPE+NLISWNSLICGFSENGFWLEAY A
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300
Query: 316 FRSLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMY 375
FRSLLE GDGL PDVATMVTLLPVCSGEG+VDMGM+IHGMAVKLGLVHELMVCNAL+DMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360
Query: 376 SKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVT 435
SKCGCLS+A ILF KIENKNVVSWNSMIGAYSREGF++ETF+LLRKMW EE+M EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420
Query: 436 ILNLLPACLEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMK 495
ILN LPACLEETELLSL+ALHGYSLR+SFQY+ELINN FIAAYAKCGSL+ AEHVF M
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480
Query: 496 TKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKE 555
TKSVSSWNAIIG YAQNGDPRKALDFYF+MTR GILPD FSI+S+LLAC RLGHLQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540
Query: 556 IHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNEL 615
IHGFVLRNGLE++SF+AVSLLSLYFHCSKP RT FERM +KN VCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600
Query: 616 PNEALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACS 675
PNE LS F QMLSEGLEPDEI +VS+LGACSQLSALGLGKEVHCFVLKN L+EDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660
Query: 676 LMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPD 735
LMDMYAKSG LG S++IFNGLN+KEVASWNVMITGFGVHGQGNKAVELFE+M RS KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720
Query: 736 RFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLI 795
RFTFLGVLQACCHAGLVSEG+YYLAQMQ+LYKLEPEL+HYACVIDMLGR GRLNEA N I
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780
Query: 796 NEMPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKW 855
NEMPEEPDAKIW SLLSSS + DLEMGEKF +KLLALE ANKADSY+LLSNLYATAGKW
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALE-ANKADSYILLSNLYATAGKW 840
Query: 856 DHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEI 915
D VRMVRQKMKDLSLQK AGCSWIE +GK+YSFIAGENSNSSSDEIRKMWNRLEKQIVEI
Sbjct: 841 DVVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNSSSDEIRKMWNRLEKQIVEI 900
Query: 916 GYTPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAA 975
GYTPD SCVLHELEEVEKIKILKGHSEKLAISFGFL TKEGTTLRISKNLRICRDCHNAA
Sbjct: 901 GYTPDCSCVLHELEEVEKIKILKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAA 960
Query: 976 KFISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
K+ISKAAKREI+IRDNKRFHHFKNG+CSCG+ W
Sbjct: 961 KYISKAAKREIVIRDNKRFHHFKNGICSCGNYW 992
BLAST of Lsi06G013810 vs. ExPASy TrEMBL
Match:
A0A1S3BX48 (pentatricopeptide repeat-containing protein At1g18485 OS=Cucumis melo OX=3656 GN=LOC103494078 PE=3 SV=1)
HSP 1 Score: 1733.4 bits (4488), Expect = 0.0e+00
Identity = 861/993 (86.71%), Postives = 913/993 (91.94%), Query Frame = 0
Query: 16 MAAVAPPFSCRHRPLTIYKPTPTTT--------SILKNSLPSTSTPKSS-FSVSAQTQTH 75
MA VAP FS RHR +YKPTPT T SI KNSL STSTPKSS F VS +TQTH
Sbjct: 1 MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60
Query: 76 QSQSINPVSHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCG 135
QS+SINPVS LSLLEEI KLCEA DLNGALDFLQ+AWKNNA YDL QRKEAMG LLQKCG
Sbjct: 61 QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120
Query: 136 QHKDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWN 195
Q+K+VEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYP ++RLVFDRLQNKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180
Query: 196 ALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVK 255
ALVS YVRN+LYDEAIHTFIELISVTEFQPDNFT PCLIKACTGKCDVHLG+SVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240
Query: 256 MGLIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSA 315
MGLIMDLFVGNAMISLYGK GF+DEA++VFDKMPE+NLISWNSLICGFSENGFWLEAY A
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300
Query: 316 FRSLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMY 375
FRSLLE GDGL PDVATMVTLLPVCSGEG+VDMGM+IHGMAVKLGLVHELMVCNAL+DMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360
Query: 376 SKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVT 435
SKCGCLS+A ILF KIENKNVVSWNSMIGAYSREGF++ETF+LLRKMW EE+M EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420
Query: 436 ILNLLPACLEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMK 495
ILN LPACLEETELLSL+ALHGYSLR+SFQY+ELINN FIAAYAKCGSL+ AEHVF M
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480
Query: 496 TKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKE 555
TKSVSSWNAIIG YAQNGDPRKALDFYF+MTR GILPD FSI+S+LLAC RLGHLQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540
Query: 556 IHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNEL 615
IHGFVLRNGLE++SF+AVSLLSLYFHCSKP RT FERM +KN VCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600
Query: 616 PNEALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACS 675
PNE LS F QMLSEGLEPDEI +VS+LGACSQLSALGLGKEVHCFVLKN L+EDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660
Query: 676 LMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPD 735
LMDMYAKSG LG S++IFNGLN+KEVASWNVMITGFGVHGQGNKAVELFE+M RS KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720
Query: 736 RFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLI 795
RFTFLGVLQACCHAGLVSEG+YYLAQMQ+LYKLEPEL+HYACVIDMLGR GRLNEA N I
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780
Query: 796 NEMPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKW 855
NEMPEEPDAKIW SLLSSS + DLEMGEKF +KLLALE ANKADSY+LLSNLYATAGKW
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALE-ANKADSYILLSNLYATAGKW 840
Query: 856 DHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEI 915
D VRMVRQKMKDLSLQK AGCSWIE +GK+YSFIAGENSNSSSDEIRKMWNRLEKQIVEI
Sbjct: 841 DVVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNSSSDEIRKMWNRLEKQIVEI 900
Query: 916 GYTPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAA 975
GYTPD SCVLHELEEVEKIKILKGHSEKLAISFGFL TKEGTTLRISKNLRICRDCHNAA
Sbjct: 901 GYTPDCSCVLHELEEVEKIKILKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAA 960
Query: 976 KFISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
K+ISKAAKREI+IRDNKRFHHFKNG+CSCG+ W
Sbjct: 961 KYISKAAKREIVIRDNKRFHHFKNGICSCGNYW 992
BLAST of Lsi06G013810 vs. ExPASy TrEMBL
Match:
A0A5D3BGK5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold346G00190 PE=3 SV=1)
HSP 1 Score: 1727.6 bits (4473), Expect = 0.0e+00
Identity = 859/993 (86.51%), Postives = 911/993 (91.74%), Query Frame = 0
Query: 16 MAAVAPPFSCRHRPLTIYKPTPTTT--------SILKNSLPSTSTPKSS-FSVSAQTQTH 75
MA VAP FS RHR +YKPTPT T SI KNSL STSTPKSS F VS +TQTH
Sbjct: 1 MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60
Query: 76 QSQSINPVSHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCG 135
QS+SINPVS LSLLEEI KLCEA DLNGALDFLQ+AWKNNA YDL QRKEAMG LLQKCG
Sbjct: 61 QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120
Query: 136 QHKDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWN 195
Q+K+VEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYP ++RLVFDRLQNKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180
Query: 196 ALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVK 255
ALVS YVRN+LYDEAIHTFIELISVTEFQPDNFT PCLIKACTGKCDVHLG+SVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240
Query: 256 MGLIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSA 315
MGLIMDLFVGNAMISLYGK GF+DEA++VFDKMPE+NLISWNSLICGFSENGFWLEAY A
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300
Query: 316 FRSLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMY 375
FRSLLE GDGL PDVATMVTLLPVCSGEG+VDMGM+IHGMAVKLGLVHELMVCNAL+DMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360
Query: 376 SKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVT 435
SKCGCLS+A ILF KIENKNVVSWNSMIGAYSREGF++ETF+LLRKMW EE+M EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420
Query: 436 ILNLLPACLEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMK 495
ILN LPACLEETELLSL+ALHGYSLR+SFQY+ELINN FIAAYAKCGSL+ AEHVF M
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480
Query: 496 TKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKE 555
TKSVSSWNAIIG YAQNGDPRKALDFYF+MTR GILPD FSI+S+LLAC RLGHLQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540
Query: 556 IHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNEL 615
IHGFVLRNGLE++SF+AVSLLSLYFHCSKP RT FERM +KN VCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600
Query: 616 PNEALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACS 675
PNE LS F QMLSEGLEPDEI +VS+LGACSQLSALGLGKEVHCFVLKN L+EDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660
Query: 676 LMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPD 735
LMDMYAKSG LG S++IFNGLN+KEVASWNVMITGFGVHGQGNKAVELFE+M RS KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720
Query: 736 RFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLI 795
RFTFLGVLQACCHAGLVSEG+YYLAQMQ+LYKLEPEL+HYACVIDMLGR GRLNEA N I
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780
Query: 796 NEMPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKW 855
NEMPEEPDAKIW SLLSSS + DLEMGEKF +KLLALE ANKADSY+LLSNLYATAGK
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALE-ANKADSYILLSNLYATAGKR 840
Query: 856 DHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEI 915
D VRMVRQKMKDLSLQK AGCSWIE +GK+YSFIAGENSN SSDEIRKMWNRLEKQIVEI
Sbjct: 841 DVVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEI 900
Query: 916 GYTPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAA 975
GYTPD SCVLHELEEVEKIK+LKGHSEKLAISFGFL TKEGTTLRISKNLRICRDCHNAA
Sbjct: 901 GYTPDCSCVLHELEEVEKIKVLKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAA 960
Query: 976 KFISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
K+ISKAAKREI+IRDNKRFHHFKNG+CSCGD W
Sbjct: 961 KYISKAAKREIVIRDNKRFHHFKNGICSCGDYW 992
BLAST of Lsi06G013810 vs. ExPASy TrEMBL
Match:
A0A6J1E1F4 (pentatricopeptide repeat-containing protein At1g18485 OS=Cucurbita moschata OX=3662 GN=LOC111429727 PE=3 SV=1)
HSP 1 Score: 1694.5 bits (4387), Expect = 0.0e+00
Identity = 854/986 (86.61%), Postives = 898/986 (91.08%), Query Frame = 0
Query: 16 MAAVAPPFSCRHR-PLTIYKPTPTTTSILKNSLPSTSTPKSSFSVSAQTQTHQSQSINPV 75
MA VAPPFSCR+R P TI K T++SILK SL S+PKSSFSVSA QTHQ+QSI V
Sbjct: 1 MAVVAPPFSCRYRAPTTIRK--LTSSSILKCSLLLISSPKSSFSVSA--QTHQAQSIKLV 60
Query: 76 SHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCGQHKDVEIG 135
S LSLLEEIC+LCEA DLNGA DFLQ+ WKNN YDLVQRKEAMGVLLQKCGQ KDVEIG
Sbjct: 61 SELSLLEEICELCEASDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIG 120
Query: 136 RKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWNALVSAYVR 195
R+LDEML VSSQFSGDFVLNTRLITMYS+CGYPSDARLVFDRLQN+NLFQWNALVS YVR
Sbjct: 121 RELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVR 180
Query: 196 NELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMGLIMDLF 255
NELYDEAIHTFIELISVT FQPDNFTLPCLIKACTGKCDV LGQSVHGMAVKMG IMDLF
Sbjct: 181 NELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLF 240
Query: 256 VGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGG 315
VGNAMISLYGK G VDEAIKVFDKMPERNLISWNSLICGFSEN WLEA+ AFR LLE
Sbjct: 241 VGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESS 300
Query: 316 DGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQ 375
DGLIPDVAT+VTLLPVCSGEGDVDMGMVIHGMA+KLGLV ELMVCNALVDMYSKCG LSQ
Sbjct: 301 DGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQ 360
Query: 376 AVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVTILNLLPAC 435
A +LF KIENKNVVSWNSM+GAYSREGF+YETFELLRKMWMEEEM++VNEVTILNLLPAC
Sbjct: 361 AALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPAC 420
Query: 436 LEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTKSVSSWN 495
+EETELLSLR LHGYSLR+ FQYDE INNAFIAAYAKCGSL AEH+FS M TKSVSSWN
Sbjct: 421 VEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWN 480
Query: 496 AIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIHGFVLRN 555
AIIGGYA NGDPRKA DFYF+M RSG D FSI ++LLACARL HLQYGKEIHGFVLRN
Sbjct: 481 AIIGGYAHNGDPRKAFDFYFRMRRSGYFLDDFSISTLLLACARLRHLQYGKEIHGFVLRN 540
Query: 556 GLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPNEALSLF 615
GLE+DSF+AVSLLSLY HCSKP ART+FER+ KN VCWNAMLSGYSQNELPNEA+SLF
Sbjct: 541 GLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLF 600
Query: 616 CQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKS 675
QMLSEGL+P+EIAM S+LGACS+LSAL LG+EVHCFVLK+ LIEDNFVACSLMDMYAKS
Sbjct: 601 RQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKSRLIEDNFVACSLMDMYAKS 660
Query: 676 GCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVL 735
GCLG+S+RIFNGLN+KE ASWNVMITGFGVHGQGNKAVELFEEM R KQPDRFTFLGVL
Sbjct: 661 GCLGRSQRIFNGLNKKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVL 720
Query: 736 QACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINEMPEEPD 795
QACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGR GRLNEA NLINEMPEEPD
Sbjct: 721 QACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPD 780
Query: 796 AKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQ 855
AKIW SLLSSSR YGDL MGEK A+KLLALE ANKADSY+LLSNLYATAGKWD VRMVRQ
Sbjct: 781 AKIWSSLLSSSRTYGDLAMGEKAAEKLLALE-ANKADSYILLSNLYATAGKWDLVRMVRQ 840
Query: 856 KMKDLSLQKAAGCSWIEFRGKIYSFIAGEN-SNSSSDEIRKMWNRLEKQIVEIGYTPDSS 915
KMKDL+LQKAAGCSWIE GKIYSFIAG + S S+EIRKMWNRLEKQIVEIGYTPDSS
Sbjct: 841 KMKDLNLQKAAGCSWIELGGKIYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSS 900
Query: 916 CVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAA 975
CVLHELEE EKIKILKGHSEKLAISFGFL TKEGTTLRI KNLRICRDCHNAAKFISKAA
Sbjct: 901 CVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAA 960
Query: 976 KREIIIRDNKRFHHFKNGLCSCGDCW 1000
KREIIIRDNKRFHHFKNG+CSCGD W
Sbjct: 961 KREIIIRDNKRFHHFKNGICSCGDYW 981
BLAST of Lsi06G013810 vs. NCBI nr
Match:
XP_038880056.1 (pentatricopeptide repeat-containing protein At1g18485 [Benincasa hispida])
HSP 1 Score: 1807.7 bits (4681), Expect = 0.0e+00
Identity = 899/984 (91.36%), Postives = 930/984 (94.51%), Query Frame = 0
Query: 16 MAAVAPPFSCRHRPLTIYKPTPTTTSILKNSLPSTSTPKSSFSVSAQTQTHQSQSINPVS 75
MA VAPPFS RHRP IYKPTPT TSI KNSL STSTPKS FSVSAQTQTHQS+S NPVS
Sbjct: 1 MAVVAPPFSGRHRPPIIYKPTPTPTSIFKNSLLSTSTPKSYFSVSAQTQTHQSRSTNPVS 60
Query: 76 HLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCGQHKDVEIGR 135
LSLLEEI KLCEA +LNGAL+FLQ+ WKNN +DL QRKEAMG+LLQKCGQHKDVEIGR
Sbjct: 61 QLSLLEEIFKLCEASNLNGALNFLQRVWKNNPGFDLAQRKEAMGMLLQKCGQHKDVEIGR 120
Query: 136 KLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWNALVSAYVRN 195
KLDEML VSSQF GDFVLNTRLITMYSICGYPSD+RLVFDRLQNKNLFQWNALVS YVRN
Sbjct: 121 KLDEMLSVSSQFCGDFVLNTRLITMYSICGYPSDSRLVFDRLQNKNLFQWNALVSGYVRN 180
Query: 196 ELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMGLIMDLFV 255
ELYDEAIHTFIELISVTEF+PDNFTLPCLIKACTGK DVHLGQSVHGMAVKMGLIMDLFV
Sbjct: 181 ELYDEAIHTFIELISVTEFEPDNFTLPCLIKACTGKYDVHLGQSVHGMAVKMGLIMDLFV 240
Query: 256 GNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGGD 315
GNAMISLYGK GFVDEA+KVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGGD
Sbjct: 241 GNAMISLYGKCGFVDEAVKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGGD 300
Query: 316 GLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQA 375
GLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQA
Sbjct: 301 GLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQA 360
Query: 376 VILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVTILNLLPACL 435
VILFRKIENKN+VSWNSMIGAYSREGF+YETFELLRKMWMEEEMMEVNEVTILNLLPACL
Sbjct: 361 VILFRKIENKNIVSWNSMIGAYSREGFVYETFELLRKMWMEEEMMEVNEVTILNLLPACL 420
Query: 436 EETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTKSVSSWNA 495
EETELLSLRALHGYSLRYSFQ DELINNAFIAAYAKCGSLI AEHVF M TKSVSSWNA
Sbjct: 421 EETELLSLRALHGYSLRYSFQCDELINNAFIAAYAKCGSLISAEHVFFGMNTKSVSSWNA 480
Query: 496 IIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIHGFVLRNG 555
I+GGYAQNGDPRKALDFYFQMTR G LPD FSI S+LLACARLGHLQYGKEIHGFVLRNG
Sbjct: 481 IVGGYAQNGDPRKALDFYFQMTRLGFLPDDFSIASLLLACARLGHLQYGKEIHGFVLRNG 540
Query: 556 LEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPNEALSLFC 615
LE+DSF+AVSLLSLY H SKP ARTYFERMG+KNLVCWNAMLSGYSQNELPNEALSLF
Sbjct: 541 LEMDSFVAVSLLSLYIHSSKPLYARTYFERMGNKNLVCWNAMLSGYSQNELPNEALSLFR 600
Query: 616 QMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSG 675
+MLSE LE ++I++VSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSG
Sbjct: 601 EMLSEQLETNKISIVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSG 660
Query: 676 CLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVLQ 735
CLGQS+RIFN LN KEVASWNVMITGFGVHGQGNKA+ELFEEM RSGKQPDRFTFLGVLQ
Sbjct: 661 CLGQSQRIFNRLNAKEVASWNVMITGFGVHGQGNKAMELFEEMQRSGKQPDRFTFLGVLQ 720
Query: 736 ACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINEMPEEPDA 795
A CHAGLVSEGLYYLAQM+SLYKLEPELEHYACVIDMLGR GRLNEA NLIN+MPEEPDA
Sbjct: 721 AYCHAGLVSEGLYYLAQMKSLYKLEPELEHYACVIDMLGRAGRLNEALNLINDMPEEPDA 780
Query: 796 KIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQK 855
KIW SLLSSSR YGDLEMGEKFA KLLALE ANK DSYV +SNLYATAGKWDHVRMVRQK
Sbjct: 781 KIWSSLLSSSRTYGDLEMGEKFAGKLLALE-ANKTDSYVSISNLYATAGKWDHVRMVRQK 840
Query: 856 MKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEIGYTPDSSCV 915
MKDLSLQK AGCSWIE RGKIYSFIAGEN N+SSDEIRKMWNRLEKQIVEIGYTPDSSCV
Sbjct: 841 MKDLSLQKDAGCSWIELRGKIYSFIAGENINTSSDEIRKMWNRLEKQIVEIGYTPDSSCV 900
Query: 916 LHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAAKR 975
LHELEEVEKIK+LKGHSEKLAISFGFLKTKEGTTLRISK+LRICRDCHNAAKFISKAA+R
Sbjct: 901 LHELEEVEKIKMLKGHSEKLAISFGFLKTKEGTTLRISKSLRICRDCHNAAKFISKAAER 960
Query: 976 EIIIRDNKRFHHFKNGLCSCGDCW 1000
+IIIRDNKRFHHFKNG CSCGD W
Sbjct: 961 QIIIRDNKRFHHFKNGFCSCGDYW 983
BLAST of Lsi06G013810 vs. NCBI nr
Match:
XP_004138210.2 (pentatricopeptide repeat-containing protein At1g18485 [Cucumis sativus] >XP_031735992.1 pentatricopeptide repeat-containing protein At1g18485 [Cucumis sativus] >KGN63758.1 hypothetical protein Csa_013257 [Cucumis sativus])
HSP 1 Score: 1735.7 bits (4494), Expect = 0.0e+00
Identity = 863/991 (87.08%), Postives = 916/991 (92.43%), Query Frame = 0
Query: 16 MAAVAPPFSCRHRPLTIYKPTPTTT------SILKNSLPSTSTPKSS-FSVSAQTQTHQS 75
MA VAP FS HR +YKPTPT T SILKNSL STSTPKSS F VSA+TQ+HQS
Sbjct: 1 MAVVAPLFSGCHRSPIMYKPTPTPTPPPTPISILKNSLLSTSTPKSSYFFVSARTQSHQS 60
Query: 76 QSINPVSHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCGQH 135
+S+NPVS LSLLEEI KLCEA DLNGALDFLQ+AWKNNA YDL QRKEAMG+LLQKCGQ+
Sbjct: 61 RSVNPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGMLLQKCGQY 120
Query: 136 KDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWNAL 195
K+VEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYP ++RLVFDRL NKNLFQWNAL
Sbjct: 121 KNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFDRLLNKNLFQWNAL 180
Query: 196 VSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMG 255
VS YVRNELYDEAIHTF+ELISVTEFQPDNFT PCLIKACTGKCD+HLG+SVHGMAVKMG
Sbjct: 181 VSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDIHLGKSVHGMAVKMG 240
Query: 256 LIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFR 315
LIMDLFVGNAMI+LYGK GF+DEA+++FDKMPE+NLISWNSLI GFSENGFWLEAY AFR
Sbjct: 241 LIMDLFVGNAMIALYGKCGFLDEAVELFDKMPEQNLISWNSLIRGFSENGFWLEAYRAFR 300
Query: 316 SLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSK 375
SLLE GDGLIPDVATMVTLLPVCSGEG+VD+GMVIHGMAVKLGLVHELMVCNAL+DMYSK
Sbjct: 301 SLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGLVHELMVCNALIDMYSK 360
Query: 376 CGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVTIL 435
CGCLS+A ILFRKIENK+VVSWNSMIGAYSREGF++ETF+LLRKMWMEEE+MEVNEVTIL
Sbjct: 361 CGCLSEAAILFRKIENKSVVSWNSMIGAYSREGFVFETFDLLRKMWMEEELMEVNEVTIL 420
Query: 436 NLLPACLEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTK 495
NLLPACLEE+ELLSLRALHGYSLR+SFQY ELINNAFIAAYAKCGSL+FAEHVF M TK
Sbjct: 421 NLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAAYAKCGSLVFAEHVFFGMNTK 480
Query: 496 SVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIH 555
SVSSWNA+IGG+AQNGDP KALDFYF+MTR GILPD FSI+S+LLAC RLG LQYGKEIH
Sbjct: 481 SVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSIVSLLLACGRLGLLQYGKEIH 540
Query: 556 GFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPN 615
GFVLRNGLE++SF+AVSLLSLYFHCSKP RTYFE MGDKN VCWNAMLSGYSQNELPN
Sbjct: 541 GFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGDKNSVCWNAMLSGYSQNELPN 600
Query: 616 EALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLM 675
EALSLF QMLS+GLEPDEIA+ SILGACSQLSALGLGKEVHCF LKN L+EDNFVACSLM
Sbjct: 601 EALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLGKEVHCFALKNSLMEDNFVACSLM 660
Query: 676 DMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRF 735
DMYAKSG LG S+RIFN LN KEVASWNVMITGFGVHGQGNKAVELFE+M RS KQPDRF
Sbjct: 661 DMYAKSGFLGHSQRIFNRLNGKEVASWNVMITGFGVHGQGNKAVELFEDMKRSDKQPDRF 720
Query: 736 TFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINE 795
TFLGVLQACCHAGLVSEGL YLAQMQ+LYKLEPELEHYACVIDMLGR GRLNEA N INE
Sbjct: 721 TFLGVLQACCHAGLVSEGLNYLAQMQTLYKLEPELEHYACVIDMLGRAGRLNEALNFINE 780
Query: 796 MPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDH 855
MPEEPDAKIW SLLSSS Y DLEMGEKFA+KLLALE ANKADSY+LLSNLYATAGKWD
Sbjct: 781 MPEEPDAKIWSSLLSSSITYVDLEMGEKFAEKLLALE-ANKADSYILLSNLYATAGKWDV 840
Query: 856 VRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEIGY 915
VRMVRQKMKDLSLQK GCSWIE RGK+YSFIAGENSN SSDEIRKMWNRLEKQIVEIGY
Sbjct: 841 VRMVRQKMKDLSLQKDVGCSWIELRGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEIGY 900
Query: 916 TPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKF 975
TPD SCVLHELEEVEK KILKGHSEK+AI FGFL TKEGTTLRISKNLRICRDCHNAAK+
Sbjct: 901 TPDCSCVLHELEEVEKRKILKGHSEKVAICFGFLNTKEGTTLRISKNLRICRDCHNAAKY 960
Query: 976 ISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
ISKAAKREI+IRDNKRFHHFK G+CSCGD W
Sbjct: 961 ISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990
BLAST of Lsi06G013810 vs. NCBI nr
Match:
XP_008453326.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Cucumis melo] >KAA0058024.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1733.4 bits (4488), Expect = 0.0e+00
Identity = 861/993 (86.71%), Postives = 913/993 (91.94%), Query Frame = 0
Query: 16 MAAVAPPFSCRHRPLTIYKPTPTTT--------SILKNSLPSTSTPKSS-FSVSAQTQTH 75
MA VAP FS RHR +YKPTPT T SI KNSL STSTPKSS F VS +TQTH
Sbjct: 1 MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60
Query: 76 QSQSINPVSHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCG 135
QS+SINPVS LSLLEEI KLCEA DLNGALDFLQ+AWKNNA YDL QRKEAMG LLQKCG
Sbjct: 61 QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120
Query: 136 QHKDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWN 195
Q+K+VEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYP ++RLVFDRLQNKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180
Query: 196 ALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVK 255
ALVS YVRN+LYDEAIHTFIELISVTEFQPDNFT PCLIKACTGKCDVHLG+SVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240
Query: 256 MGLIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSA 315
MGLIMDLFVGNAMISLYGK GF+DEA++VFDKMPE+NLISWNSLICGFSENGFWLEAY A
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300
Query: 316 FRSLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMY 375
FRSLLE GDGL PDVATMVTLLPVCSGEG+VDMGM+IHGMAVKLGLVHELMVCNAL+DMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360
Query: 376 SKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVT 435
SKCGCLS+A ILF KIENKNVVSWNSMIGAYSREGF++ETF+LLRKMW EE+M EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420
Query: 436 ILNLLPACLEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMK 495
ILN LPACLEETELLSL+ALHGYSLR+SFQY+ELINN FIAAYAKCGSL+ AEHVF M
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480
Query: 496 TKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKE 555
TKSVSSWNAIIG YAQNGDPRKALDFYF+MTR GILPD FSI+S+LLAC RLGHLQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540
Query: 556 IHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNEL 615
IHGFVLRNGLE++SF+AVSLLSLYFHCSKP RT FERM +KN VCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600
Query: 616 PNEALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACS 675
PNE LS F QMLSEGLEPDEI +VS+LGACSQLSALGLGKEVHCFVLKN L+EDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660
Query: 676 LMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPD 735
LMDMYAKSG LG S++IFNGLN+KEVASWNVMITGFGVHGQGNKAVELFE+M RS KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720
Query: 736 RFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLI 795
RFTFLGVLQACCHAGLVSEG+YYLAQMQ+LYKLEPEL+HYACVIDMLGR GRLNEA N I
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780
Query: 796 NEMPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKW 855
NEMPEEPDAKIW SLLSSS + DLEMGEKF +KLLALE ANKADSY+LLSNLYATAGKW
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALE-ANKADSYILLSNLYATAGKW 840
Query: 856 DHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEI 915
D VRMVRQKMKDLSLQK AGCSWIE +GK+YSFIAGENSNSSSDEIRKMWNRLEKQIVEI
Sbjct: 841 DVVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNSSSDEIRKMWNRLEKQIVEI 900
Query: 916 GYTPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAA 975
GYTPD SCVLHELEEVEKIKILKGHSEKLAISFGFL TKEGTTLRISKNLRICRDCHNAA
Sbjct: 901 GYTPDCSCVLHELEEVEKIKILKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAA 960
Query: 976 KFISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
K+ISKAAKREI+IRDNKRFHHFKNG+CSCG+ W
Sbjct: 961 KYISKAAKREIVIRDNKRFHHFKNGICSCGNYW 992
BLAST of Lsi06G013810 vs. NCBI nr
Match:
TYJ98247.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1727.6 bits (4473), Expect = 0.0e+00
Identity = 859/993 (86.51%), Postives = 911/993 (91.74%), Query Frame = 0
Query: 16 MAAVAPPFSCRHRPLTIYKPTPTTT--------SILKNSLPSTSTPKSS-FSVSAQTQTH 75
MA VAP FS RHR +YKPTPT T SI KNSL STSTPKSS F VS +TQTH
Sbjct: 1 MAVVAPLFSGRHRSPIMYKPTPTPTPTPTPTPISIFKNSLLSTSTPKSSYFFVSPRTQTH 60
Query: 76 QSQSINPVSHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCG 135
QS+SINPVS LSLLEEI KLCEA DLNGALDFLQ+AWKNNA YDL QRKEAMG LLQKCG
Sbjct: 61 QSRSINPVSQLSLLEEISKLCEAGDLNGALDFLQRAWKNNAGYDLAQRKEAMGKLLQKCG 120
Query: 136 QHKDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWN 195
Q+K+VEIGRKLDEMLCVSSQFS DFVLNTRLITMYSICGYP ++RLVFDRLQNKNLFQWN
Sbjct: 121 QYKNVEIGRKLDEMLCVSSQFSSDFVLNTRLITMYSICGYPLESRLVFDRLQNKNLFQWN 180
Query: 196 ALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVK 255
ALVS YVRN+LYDEAIHTFIELISVTEFQPDNFT PCLIKACTGKCDVHLG+SVHGM VK
Sbjct: 181 ALVSGYVRNQLYDEAIHTFIELISVTEFQPDNFTFPCLIKACTGKCDVHLGKSVHGMVVK 240
Query: 256 MGLIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSA 315
MGLIMDLFVGNAMISLYGK GF+DEA++VFDKMPE+NLISWNSLICGFSENGFWLEAY A
Sbjct: 241 MGLIMDLFVGNAMISLYGKRGFLDEAVEVFDKMPEQNLISWNSLICGFSENGFWLEAYRA 300
Query: 316 FRSLLEGGDGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMY 375
FRSLLE GDGL PDVATMVTLLPVCSGEG+VDMGM+IHGMAVKLGLVHELMVCNAL+DMY
Sbjct: 301 FRSLLESGDGLTPDVATMVTLLPVCSGEGNVDMGMMIHGMAVKLGLVHELMVCNALIDMY 360
Query: 376 SKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVT 435
SKCGCLS+A ILF KIENKNVVSWNSMIGAYSREGF++ETF+LLRKMW EE+M EVNEVT
Sbjct: 361 SKCGCLSEAAILFCKIENKNVVSWNSMIGAYSREGFVFETFDLLRKMWKEEKMTEVNEVT 420
Query: 436 ILNLLPACLEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMK 495
ILN LPACLEETELLSL+ALHGYSLR+SFQY+ELINN FIAAYAKCGSL+ AEHVF M
Sbjct: 421 ILNSLPACLEETELLSLKALHGYSLRFSFQYEELINNGFIAAYAKCGSLVSAEHVFFGMN 480
Query: 496 TKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKE 555
TKSVSSWNAIIG YAQNGDPRKALDFYF+MTR GILPD FSI+S+LLAC RLGHLQYGKE
Sbjct: 481 TKSVSSWNAIIGEYAQNGDPRKALDFYFEMTRLGILPDDFSIVSLLLACGRLGHLQYGKE 540
Query: 556 IHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNEL 615
IHGFVLRNGLE++SF+AVSLLSLYFHCSKP RT FERM +KN VCWNAMLSG SQNEL
Sbjct: 541 IHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTCFERMENKNSVCWNAMLSGLSQNEL 600
Query: 616 PNEALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACS 675
PNE LS F QMLSEGLEPDEI +VS+LGACSQLSALGLGKEVHCFVLKN L+EDNFVACS
Sbjct: 601 PNETLSSFRQMLSEGLEPDEITIVSVLGACSQLSALGLGKEVHCFVLKNSLMEDNFVACS 660
Query: 676 LMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPD 735
LMDMYAKSG LG S++IFNGLN+KEVASWNVMITGFGVHGQGNKAVELFE+M RS KQPD
Sbjct: 661 LMDMYAKSGFLGHSQQIFNGLNDKEVASWNVMITGFGVHGQGNKAVELFEDMQRSNKQPD 720
Query: 736 RFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLI 795
RFTFLGVLQACCHAGLVSEG+YYLAQMQ+LYKLEPEL+HYACVIDMLGR GRLNEA N I
Sbjct: 721 RFTFLGVLQACCHAGLVSEGMYYLAQMQTLYKLEPELKHYACVIDMLGRAGRLNEALNFI 780
Query: 796 NEMPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKW 855
NEMPEEPDAKIW SLLSSS + DLEMGEKF +KLLALE ANKADSY+LLSNLYATAGK
Sbjct: 781 NEMPEEPDAKIWSSLLSSSITHVDLEMGEKFGEKLLALE-ANKADSYILLSNLYATAGKR 840
Query: 856 DHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEI 915
D VRMVRQKMKDLSLQK AGCSWIE +GK+YSFIAGENSN SSDEIRKMWNRLEKQIVEI
Sbjct: 841 DVVRMVRQKMKDLSLQKDAGCSWIELQGKVYSFIAGENSNPSSDEIRKMWNRLEKQIVEI 900
Query: 916 GYTPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAA 975
GYTPD SCVLHELEEVEKIK+LKGHSEKLAISFGFL TKEGTTLRISKNLRICRDCHNAA
Sbjct: 901 GYTPDCSCVLHELEEVEKIKVLKGHSEKLAISFGFLNTKEGTTLRISKNLRICRDCHNAA 960
Query: 976 KFISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
K+ISKAAKREI+IRDNKRFHHFKNG+CSCGD W
Sbjct: 961 KYISKAAKREIVIRDNKRFHHFKNGICSCGDYW 992
BLAST of Lsi06G013810 vs. NCBI nr
Match:
XP_022921451.1 (pentatricopeptide repeat-containing protein At1g18485 [Cucurbita moschata])
HSP 1 Score: 1694.5 bits (4387), Expect = 0.0e+00
Identity = 854/986 (86.61%), Postives = 898/986 (91.08%), Query Frame = 0
Query: 16 MAAVAPPFSCRHR-PLTIYKPTPTTTSILKNSLPSTSTPKSSFSVSAQTQTHQSQSINPV 75
MA VAPPFSCR+R P TI K T++SILK SL S+PKSSFSVSA QTHQ+QSI V
Sbjct: 1 MAVVAPPFSCRYRAPTTIRK--LTSSSILKCSLLLISSPKSSFSVSA--QTHQAQSIKLV 60
Query: 76 SHLSLLEEICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCGQHKDVEIG 135
S LSLLEEIC+LCEA DLNGA DFLQ+ WKNN YDLVQRKEAMGVLLQKCGQ KDVEIG
Sbjct: 61 SELSLLEEICELCEASDLNGAFDFLQRGWKNNGGYDLVQRKEAMGVLLQKCGQFKDVEIG 120
Query: 136 RKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWNALVSAYVR 195
R+LDEML VSSQFSGDFVLNTRLITMYS+CGYPSDARLVFDRLQN+NLFQWNALVS YVR
Sbjct: 121 RELDEMLRVSSQFSGDFVLNTRLITMYSMCGYPSDARLVFDRLQNRNLFQWNALVSGYVR 180
Query: 196 NELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMGLIMDLF 255
NELYDEAIHTFIELISVT FQPDNFTLPCLIKACTGKCDV LGQSVHGMAVKMG IMDLF
Sbjct: 181 NELYDEAIHTFIELISVTGFQPDNFTLPCLIKACTGKCDVRLGQSVHGMAVKMGFIMDLF 240
Query: 256 VGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGG 315
VGNAMISLYGK G VDEAIKVFDKMPERNLISWNSLICGFSEN WLEA+ AFR LLE
Sbjct: 241 VGNAMISLYGKCGLVDEAIKVFDKMPERNLISWNSLICGFSENELWLEAFGAFRRLLESS 300
Query: 316 DGLIPDVATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQ 375
DGLIPDVAT+VTLLPVCSGEGDVDMGMVIHGMA+KLGLV ELMVCNALVDMYSKCG LSQ
Sbjct: 301 DGLIPDVATIVTLLPVCSGEGDVDMGMVIHGMALKLGLVRELMVCNALVDMYSKCGYLSQ 360
Query: 376 AVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVTILNLLPAC 435
A +LF KIENKNVVSWNSM+GAYSREGF+YETFELLRKMWMEEEM++VNEVTILNLLPAC
Sbjct: 361 AALLFHKIENKNVVSWNSMVGAYSREGFVYETFELLRKMWMEEEMIKVNEVTILNLLPAC 420
Query: 436 LEETELLSLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTKSVSSWN 495
+EETELLSLR LHGYSLR+ FQYDE INNAFIAAYAKCGSL AEH+FS M TKSVSSWN
Sbjct: 421 VEETELLSLRELHGYSLRHWFQYDESINNAFIAAYAKCGSLSSAEHIFSGMNTKSVSSWN 480
Query: 496 AIIGGYAQNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIHGFVLRN 555
AIIGGYA NGDPRKA DFYF+M RSG D FSI ++LLACARL HLQYGKEIHGFVLRN
Sbjct: 481 AIIGGYAHNGDPRKAFDFYFRMRRSGYFLDDFSISTLLLACARLRHLQYGKEIHGFVLRN 540
Query: 556 GLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPNEALSLF 615
GLE+DSF+AVSLLSLY HCSKP ART+FER+ KN VCWNAMLSGYSQNELPNEA+SLF
Sbjct: 541 GLEMDSFVAVSLLSLYIHCSKPFYARTFFERIKVKNSVCWNAMLSGYSQNELPNEAISLF 600
Query: 616 CQMLSEGLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKS 675
QMLSEGL+P+EIAM S+LGACS+LSAL LG+EVHCFVLK+ LIEDNFVACSLMDMYAKS
Sbjct: 601 RQMLSEGLKPNEIAMASVLGACSELSALSLGREVHCFVLKSRLIEDNFVACSLMDMYAKS 660
Query: 676 GCLGQSRRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVL 735
GCLG+S+RIFNGLN+KE ASWNVMITGFGVHGQGNKAVELFEEM R KQPDRFTFLGVL
Sbjct: 661 GCLGRSQRIFNGLNKKEAASWNVMITGFGVHGQGNKAVELFEEMQRLNKQPDRFTFLGVL 720
Query: 736 QACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINEMPEEPD 795
QACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGR GRLNEA NLINEMPEEPD
Sbjct: 721 QACCHAGLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRAGRLNEALNLINEMPEEPD 780
Query: 796 AKIWCSLLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQ 855
AKIW SLLSSSR YGDL MGEK A+KLLALE ANKADSY+LLSNLYATAGKWD VRMVRQ
Sbjct: 781 AKIWSSLLSSSRTYGDLAMGEKAAEKLLALE-ANKADSYILLSNLYATAGKWDLVRMVRQ 840
Query: 856 KMKDLSLQKAAGCSWIEFRGKIYSFIAGEN-SNSSSDEIRKMWNRLEKQIVEIGYTPDSS 915
KMKDL+LQKAAGCSWIE GKIYSFIAG + S S+EIRKMWNRLEKQIVEIGYTPDSS
Sbjct: 841 KMKDLNLQKAAGCSWIELGGKIYSFIAGNDLSILDSNEIRKMWNRLEKQIVEIGYTPDSS 900
Query: 916 CVLHELEEVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAA 975
CVLHELEE EKIKILKGHSEKLAISFGFL TKEGTTLRI KNLRICRDCHNAAKFISKAA
Sbjct: 901 CVLHELEEEEKIKILKGHSEKLAISFGFLNTKEGTTLRICKNLRICRDCHNAAKFISKAA 960
Query: 976 KREIIIRDNKRFHHFKNGLCSCGDCW 1000
KREIIIRDNKRFHHFKNG+CSCGD W
Sbjct: 961 KREIIIRDNKRFHHFKNGICSCGDYW 981
BLAST of Lsi06G013810 vs. TAIR 10
Match:
AT1G18485.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 1037.7 bits (2682), Expect = 6.0e-303
Identity = 506/956 (52.93%), Postives = 698/956 (73.01%), Query Frame = 0
Query: 51 STPKSSFSVSAQTQTHQSQSINPVSHLSLLEEICKLCEADDLNGAL----DFLQKAWKNN 110
S +SSF + S + +H L I CE DL+ + +F+ ++
Sbjct: 20 SRKESSFPRAVYNSNSISSNSTNANH--FLRRISNFCETGDLDKSFRTVQEFVGDDESSS 79
Query: 111 AAYDLVQRKEAMGVLLQKCGQHKDVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGY 170
A+ LV +EA+G+LLQ G+ KD+E+GRK+ +++ S++ D VL TR+ITMY++CG
Sbjct: 80 DAFLLV--REALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGS 139
Query: 171 PSDARLVFDRLQNKNLFQWNALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIK 230
P D+R VFD L++KNLFQWNA++S+Y RNELYDE + TFIE+IS T+ PD+FT PC+IK
Sbjct: 140 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIK 199
Query: 231 ACTGKCDVHLGQSVHGMAVKMGLIMDLFVGNAMISLYGKYGFVDEAIKVFDKMPERNLIS 290
AC G DV +G +VHG+ VK GL+ D+FVGNA++S YG +GFV +A+++FD MPERNL+S
Sbjct: 200 ACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVS 259
Query: 291 WNSLICGFSENGFWLEAYSAFRSLL-EGGDG-LIPDVATMVTLLPVCSGEGDVDMGMVIH 350
WNS+I FS+NGF E++ ++ E GDG +PDVAT+VT+LPVC+ E ++ +G +H
Sbjct: 260 WNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVH 319
Query: 351 GMAVKLGLVHELMVCNALVDMYSKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIY 410
G AVKL L EL++ NAL+DMYSKCGC++ A ++F+ NKNVVSWN+M+G +S EG +
Sbjct: 320 GWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTH 379
Query: 411 ETFELLRKMWMEEEMMEVNEVTILNLLPACLEETELLSLRALHGYSLRYSFQYDELINNA 470
TF++LR+M E ++ +EVTILN +P C E+ L SL+ LH YSL+ F Y+EL+ NA
Sbjct: 380 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANA 439
Query: 471 FIAAYAKCGSLIFAEHVFSEMKTKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRSGILPD 530
F+A+YAKCGSL +A+ VF +++K+V+SWNA+IGG+AQ+ DPR +LD + QM SG+LPD
Sbjct: 440 FVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPD 499
Query: 531 YFSIISILLACARLGHLQYGKEIHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFE 590
F++ S+L AC++L L+ GKE+HGF++RN LE D F+ +S+LSLY HC + + + F+
Sbjct: 500 SFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFD 559
Query: 591 RMGDKNLVCWNAMLSGYSQNELPNEALSLFCQMLSEGLEPDEIAMVSILGACSQLSALGL 650
M DK+LV WN +++GY QN P+ AL +F QM+ G++ I+M+ + GACS L +L L
Sbjct: 560 AMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRL 619
Query: 651 GKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMITGFGV 710
G+E H + LK+ L +D F+ACSL+DMYAK+G + QS ++FNGL EK ASWN MI G+G+
Sbjct: 620 GREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYGI 679
Query: 711 HGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKLEPELE 770
HG +A++LFEEM R+G PD TFLGVL AC H+GL+ EGL YL QM+S + L+P L+
Sbjct: 680 HGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLK 739
Query: 771 HYACVIDMLGRTGRLNEAFNLI-NEMPEEPDAKIWCSLLSSSRIYGDLEMGEKFAKKLLA 830
HYACVIDMLGR G+L++A ++ EM EE D IW SLLSS RI+ +LEMGEK A KL
Sbjct: 740 HYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLFE 799
Query: 831 LEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYSFIAGE 890
LE K ++YVLLSNLYA GKW+ VR VRQ+M ++SL+K AGCSWIE K++SF+ GE
Sbjct: 800 LE-PEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 859
Query: 891 NSNSSSDEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEVEKIKILKGHSEKLAISFGFLK 950
+EI+ +W+ LE +I ++GY PD+ V H+L E EKI+ L+GHSEKLA+++G +K
Sbjct: 860 RFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYGLIK 919
Query: 951 TKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGLCSCGDCW 1000
T EGTT+R+ KNLRIC DCHNAAK ISK +REI++RDNKRFHHFKNG+CSCGD W
Sbjct: 920 TSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
BLAST of Lsi06G013810 vs. TAIR 10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 623.6 bits (1607), Expect = 2.7e-178
Identity = 334/845 (39.53%), Postives = 511/845 (60.47%), Query Frame = 0
Query: 178 QNKNLFQWNALVSAYVRNELYDEAIHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLG 237
Q+++ W L+ + VR+ L EA+ T++++I V +PDN+ P L+KA D+ LG
Sbjct: 58 QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMI-VLGIKPDNYAFPALLKAVADLQDMELG 117
Query: 238 QSVHGMAVKMGLIMD-LFVGNAMISLYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSE 297
+ +H K G +D + V N +++LY K G KVFD++ ERN +SWNSLI
Sbjct: 118 KQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCS 177
Query: 298 NGFWLEAYSAFRSLLEGGDGLIPDVATMVTLLPVCSG----EGDVDMGMVIHGMAVKLGL 357
W A AFR +L+ + + P T+V+++ CS EG + MG +H ++ G
Sbjct: 178 FEKWEMALEAFRCMLD--ENVEPSSFTLVSVVTACSNLPMPEG-LMMGKQVHAYGLRKGE 237
Query: 358 VHELMVCNALVDMYSKCGCLSQAVILFRKIENKNVVSWNSMIGAYSREGFIYETFELLRK 417
++ ++ N LV MY K G L+ + +L +++V+WN+++ + + + E E LR+
Sbjct: 238 LNSFII-NTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLRE 297
Query: 418 MWMEEEMMEVNEVTILNLLPACLEETELLSLRALHGYSLRY-SFQYDELINNAFIAAYAK 477
M +E +E +E TI ++LPAC L + + LH Y+L+ S + + +A + Y
Sbjct: 298 MVLEG--VEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCN 357
Query: 478 CGSLIFAEHVFSEMKTKSVSSWNAIIGGYAQNGDPRKALDFYFQMTRS-GILPDYFSIIS 537
C ++ VF M + + WNA+I GY+QN ++AL + M S G+L + ++
Sbjct: 358 CKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAG 417
Query: 538 ILLACARLGHLQYGKEIHGFVLRNGLEIDSFIAVSLLSLYFHCSKPSSARTYFERMGDKN 597
++ AC R G + IHGFV++ GL+ D F+ +L+ +Y K A F +M D++
Sbjct: 418 VVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRD 477
Query: 598 LVCWNAMLSGYSQNELPNEALSLFCQM------LSEG-----LEPDEIAMVSILGACSQL 657
LV WN M++GY +E +AL L +M +S+G L+P+ I +++IL +C+ L
Sbjct: 478 LVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAAL 537
Query: 658 SALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQSRRIFNGLNEKEVASWNVMI 717
SAL GKE+H + +KN L D V +L+DMYAK GCL SR++F+ + +K V +WNV+I
Sbjct: 538 SALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVII 597
Query: 718 TGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHAGLVSEGLYYLAQMQSLYKL 777
+G+HG G +A++L M+ G +P+ TF+ V AC H+G+V EGL M+ Y +
Sbjct: 598 MAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGV 657
Query: 778 EPELEHYACVIDMLGRTGRLNEAFNLINEMPEE-PDAKIWCSLLSSSRIYGDLEMGEKFA 837
EP +HYACV+D+LGR GR+ EA+ L+N MP + A W SLL +SRI+ +LE+GE A
Sbjct: 658 EPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAA 717
Query: 838 KKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLSLQKAAGCSWIEFRGKIYS 897
+ L+ LE N A YVLL+N+Y++AG WD VR+ MK+ ++K GCSWIE +++
Sbjct: 718 QNLIQLE-PNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHK 777
Query: 898 FIAGENSNSSSDE----IRKMWNRLEKQIVEIGYTPDSSCVLHELEEVEKIKILKGHSEK 957
F+AG++S+ S++ + +W R+ K+ GY PD+SCVLH +EE EK +L GHSEK
Sbjct: 778 FVAGDSSHPQSEKLSGYLETLWERMRKE----GYVPDTSCVLHNVEEDEKEILLCGHSEK 837
Query: 958 LAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHFKNGLCS 1000
LAI+FG L T GT +R++KNLR+C DCH A KFISK REII+RD +RFH FKNG CS
Sbjct: 838 LAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCS 890
BLAST of Lsi06G013810 vs. TAIR 10
Match:
AT3G03580.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 576.2 bits (1484), Expect = 4.9e-164
Identity = 307/855 (35.91%), Postives = 494/855 (57.78%), Query Frame = 0
Query: 148 SGDFVLNTRLITMYSICGYPSDARLVFDRLQ-NKNLFQWNALVSAYVRNELYDEAIHTFI 207
S DF + +LI YS P+ + VF R+ KN++ WN+++ A+ +N L+ EA+ F
Sbjct: 37 SSDF-FSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNGLFPEALE-FY 96
Query: 208 ELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMGLIMDLFVGNAMISLYGKY 267
+ ++ PD +T P +IKAC G D +G V+ + MG DLFVGNA++ +Y +
Sbjct: 97 GKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRM 156
Query: 268 GFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGGDGLIPDVATMVT 327
G + A +VFD+MP R+L+SWNSLI G+S +G++ EA + L ++PD T+ +
Sbjct: 157 GLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHEL--KNSWIVPDSFTVSS 216
Query: 328 LLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQAVILFRKIENKN 387
+LP V G +HG A+K G+ ++V N LV MY K + A +F +++ ++
Sbjct: 217 VLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRD 276
Query: 388 VVSWNSMIGAYSREGFIYETFELLRKMWMEE-EMMEVNEVTILNLLPACLEETELLSLRA 447
VS+N+MI Y + + E+ +M++E + + + +T+ ++L AC +L +
Sbjct: 277 SVSYNTMICGYLKLEMVEESV----RMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKY 336
Query: 448 LHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTKSVSSWNAIIGGYAQNGD 507
++ Y L+ F + + N I YAKCG +I A VF+ M+ K SWN+II GY Q+GD
Sbjct: 337 IYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGD 396
Query: 508 PRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIHGFVLRNGLEIDSFIAVS 567
+A+ + M D+ + + ++ RL L++GK +H +++G+ ID ++ +
Sbjct: 397 LMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNA 456
Query: 568 LLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPNEALSLFCQMLSEGLEPD 627
L+ +Y C + + F MG + V WN ++S + L + QM + PD
Sbjct: 457 LIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPD 516
Query: 628 EIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQSRRIFN 687
+ L C+ L+A LGKE+HC +L+ + + +L++MY+K GCL S R+F
Sbjct: 517 MATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFE 576
Query: 688 GLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHAGLVSE 747
++ ++V +W MI +G++G+G KA+E F +M +SG PD F+ ++ AC H+GLV E
Sbjct: 577 RMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDE 636
Query: 748 GLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINEMPEEPDAKIWCSLLSSS 807
GL +M++ YK++P +EHYACV+D+L R+ ++++A I MP +PDA IW S+L +
Sbjct: 637 GLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRAC 696
Query: 808 RIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLSLQKAA 867
R GD+E E+ +++++ L + S +L SN YA KWD V ++R+ +KD + K
Sbjct: 697 RTSGDMETAERVSRRIIELNPDDPGYS-ILASNAYAALRKWDKVSLIRKSLKDKHITKNP 756
Query: 868 GCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEIGYTPDSSCVLHEL-EEVEK 927
G SWIE ++ F +G++S S+ I K L + + GY PD V L EE EK
Sbjct: 757 GYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEK 816
Query: 928 IKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIRDNKR 987
+++ GHSE+LAI+FG L T+ GT L++ KNLR+C DCH K ISK REI++RD R
Sbjct: 817 RRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANR 876
Query: 988 FHHFKNGLCSCGDCW 1000
FH FK+G CSC D W
Sbjct: 877 FHLFKDGTCSCKDRW 882
BLAST of Lsi06G013810 vs. TAIR 10
Match:
AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 564.3 bits (1453), Expect = 1.9e-160
Identity = 313/919 (34.06%), Postives = 494/919 (53.75%), Query Frame = 0
Query: 82 EICKLCEADDLNGALDFLQKAWKNNAAYDLVQRKEAMGVLLQKCGQHKDVEIGRKLDEML 141
++ + CE+ +L A+ L + K +D+ R + +LQ C K ++ G+++D +
Sbjct: 67 QLRRFCESGNLENAVKLLCVSGK----WDIDPR--TLCSVLQLCADSKSLKDGKEVDNFI 126
Query: 142 CVSSQFSGDFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWNALVSAYVRNELYDEA 201
+ F D L ++L MY+ CG +A VFD ++ + WN L++ ++ + +
Sbjct: 127 -RGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFWNILMNELAKSGDFSGS 186
Query: 202 IHTFIELISVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMGLIMDLFVGNAMIS 261
I F +++S + + D++T C+ K+ + VH G+ +HG +K G VGN++++
Sbjct: 187 IGLFKKMMS-SGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNSLVA 246
Query: 262 LYGKYGFVDEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGGDGLIPDV 321
Y K VD A KVFD+M ER++ISWNS+I G+ NG + S F +L G + D+
Sbjct: 247 FYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGIEI--DL 306
Query: 322 ATMVTLLPVCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQAVILFRK 381
AT+V++ C+ + +G +H + VK E CN L+DMYSKCG L A +FR+
Sbjct: 307 ATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFRE 366
Query: 382 IENKNVVSWNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVTILNLLPACLEETELL 441
+ +++VVS+ SMI Y+REG E +L + MEEE
Sbjct: 367 MSDRSVVSYTSMIAGYAREGLAGEAVKLFEE--MEEE----------------------- 426
Query: 442 SLRALHGYSLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTKSVSSWNAIIGGYA 501
Sbjct: 427 ------------------------------------------------------------ 486
Query: 502 QNGDPRKALDFYFQMTRSGILPDYFSIISILLACARLGHLQYGKEIHGFVLRNGLEIDSF 561
GI PD +++ ++L CAR L GK +H ++ N L D F
Sbjct: 487 ------------------GISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIF 546
Query: 562 IAVSLLSLYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPNEALSLFCQMLSE- 621
++ +L+ +Y C A F M K+++ WN ++ GYS+N NEALSLF +L E
Sbjct: 547 VSNALMDMYAKCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK 606
Query: 622 GLEPDEIAMVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQS 681
PDE + +L AC+ LSA G+E+H ++++N D VA SL+DMYAK G L +
Sbjct: 607 RFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLA 666
Query: 682 RRIFNGLNEKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHA 741
+F+ + K++ SW VMI G+G+HG G +A+ LF +M ++G + D +F+ +L AC H+
Sbjct: 667 HMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHS 726
Query: 742 GLVSEGLYYLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINEMPEEPDAKIWCS 801
GLV EG + M+ K+EP +EHYAC++DML RTG L +A+ I MP PDA IW +
Sbjct: 727 GLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGA 786
Query: 802 LLSSSRIYGDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLS 861
LL RI+ D+++ EK A+K+ LE N YVL++N+YA A KW+ V+ +R+++
Sbjct: 787 LLCGCRIHHDVKLAEKVAEKVFELEPEN-TGYYVLMANIYAEAEKWEQVKRLRKRIGQRG 846
Query: 862 LQKAAGCSWIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEIGYTPDSSCVLHELE 921
L+K GCSWIE +G++ F+AG++SN ++ I ++ +++E GY+P + L + E
Sbjct: 847 LRKNPGCSWIEIKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAE 871
Query: 922 EVEKIKILKGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIR 981
E+EK + L GHSEKLA++ G + + G +R++KNLR+C DCH AKF+SK +REI++R
Sbjct: 907 EMEKEEALCGHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLR 871
Query: 982 DNKRFHHFKNGLCSCGDCW 1000
D+ RFH FK+G CSC W
Sbjct: 967 DSNRFHQFKDGHCSCRGFW 871
BLAST of Lsi06G013810 vs. TAIR 10
Match:
AT1G16480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 550.4 bits (1417), Expect = 2.9e-156
Identity = 297/851 (34.90%), Postives = 482/851 (56.64%), Query Frame = 0
Query: 150 DFVLNTRLITMYSICGYPSDARLVFDRLQNKNLFQWNALVSAYVRNELYDEAIHTFIELI 209
D ++T ++ +Y + G S +R VF+ + ++N+ W +L+ Y +E I + +
Sbjct: 93 DVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMR 152
Query: 210 SVTEFQPDNFTLPCLIKACTGKCDVHLGQSVHGMAVKMGLIMDLFVGNAMISLYGKYGFV 269
+N ++ +I +C D LG+ + G VK GL L V N++IS+ G G V
Sbjct: 153 GEGVGCNEN-SMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNV 212
Query: 270 DEAIKVFDKMPERNLISWNSLICGFSENGFWLEAYSAFRSLLEGGDGLIPDVATMVTLLP 329
D A +FD+M ER+ ISWNS+ +++NG E++ F + D + + T+ TLL
Sbjct: 213 DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEV--NSTTVSTLLS 272
Query: 330 VCSGEGDVDMGMVIHGMAVKLGLVHELMVCNALVDMYSKCGCLSQAVILFRKIENKNVVS 389
V G IHG+ VK+G + VCN L+ MY+ G +A ++F+++ K+++S
Sbjct: 273 VLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLIS 332
Query: 390 WNSMIGAYSREGFIYETFELLRKMWMEEEMMEVNEVTILNLLPACLEETELLSLRALHGY 449
WNS++ ++ +G + LL M + VN VT + L AC R LHG
Sbjct: 333 WNSLMASFVNDGRSLDALGLLCSMISSGK--SVNYVTFTSALAACFTPDFFEKGRILHGL 392
Query: 450 SLRYSFQYDELINNAFIAAYAKCGSLIFAEHVFSEMKTKSVSSWNAIIGGYAQNGDPRKA 509
+ Y+++I NA ++ Y K G + + V +M + V +WNA+IGGYA++ DP KA
Sbjct: 393 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 452
Query: 510 LDFYFQMTRSGILPDYFSIISILLACARLGH-LQYGKEIHGFVLRNGLEIDSFIAVSLLS 569
L + M G+ +Y +++S+L AC G L+ GK +H +++ G E D + SL++
Sbjct: 453 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 512
Query: 570 LYFHCSKPSSARTYFERMGDKNLVCWNAMLSGYSQNELPNEALSLFCQMLSEGLEPDEIA 629
+Y C SS++ F + ++N++ WNAML+ + + E L L +M S G+ D+ +
Sbjct: 513 MYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFS 572
Query: 630 MVSILGACSQLSALGLGKEVHCFVLKNCLIEDNFVACSLMDMYAKSGCLGQSRRIFNGLN 689
L A ++L+ L G+++H +K D+F+ + DMY+K G +G+ ++
Sbjct: 573 FSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSV 632
Query: 690 EKEVASWNVMITGFGVHGQGNKAVELFEEMLRSGKQPDRFTFLGVLQACCHAGLVSEGLY 749
+ + SWN++I+ G HG + F EML G +P TF+ +L AC H GLV +GL
Sbjct: 633 NRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA 692
Query: 750 YLAQMQSLYKLEPELEHYACVIDMLGRTGRLNEAFNLINEMPEEPDAKIWCSLLSSSRIY 809
Y + + LEP +EH CVID+LGR+GRL EA I++MP +P+ +W SLL+S +I+
Sbjct: 693 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIH 752
Query: 810 GDLEMGEKFAKKLLALEAANKADSYVLLSNLYATAGKWDHVRMVRQKMKDLSLQKAAGCS 869
G+L+ G K A+ L LE + + YVL SN++AT G+W+ V VR++M +++K CS
Sbjct: 753 GNLDRGRKAAENLSKLEPEDDS-VYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACS 812
Query: 870 WIEFRGKIYSFIAGENSNSSSDEIRKMWNRLEKQIVEIGYTPDSSCVLHELEEVEKIKIL 929
W++ + K+ SF G+ ++ + EI ++K I E GY D+S L + +E +K L
Sbjct: 813 WVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNL 872
Query: 930 KGHSEKLAISFGFLKTKEGTTLRISKNLRICRDCHNAAKFISKAAKREIIIRDNKRFHHF 989
HSE+LA+++ + T EG+T+RI KNLRIC DCH+ KF+S+ R I++RD RFHHF
Sbjct: 873 WNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHF 932
Query: 990 KNGLCSCGDCW 1000
+ GLCSC D W
Sbjct: 933 ERGLCSCKDYW 937
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q0WN60 | 8.4e-302 | 52.93 | Pentatricopeptide repeat-containing protein At1g18485 OS=Arabidopsis thaliana OX... | [more] |
Q7Y211 | 3.8e-177 | 39.53 | Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop... | [more] |
Q9M1V3 | 6.5e-169 | 36.37 | Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidop... | [more] |
Q9SS60 | 7.0e-163 | 35.91 | Pentatricopeptide repeat-containing protein At3g03580 OS=Arabidopsis thaliana OX... | [more] |
Q9SN39 | 2.7e-159 | 34.06 | Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LPM0 | 0.0e+00 | 87.08 | DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G0150... | [more] |
A0A5A7US76 | 0.0e+00 | 86.71 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BX48 | 0.0e+00 | 86.71 | pentatricopeptide repeat-containing protein At1g18485 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5D3BGK5 | 0.0e+00 | 86.51 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A6J1E1F4 | 0.0e+00 | 86.61 | pentatricopeptide repeat-containing protein At1g18485 OS=Cucurbita moschata OX=3... | [more] |
Match Name | E-value | Identity | Description | |
XP_038880056.1 | 0.0e+00 | 91.36 | pentatricopeptide repeat-containing protein At1g18485 [Benincasa hispida] | [more] |
XP_004138210.2 | 0.0e+00 | 87.08 | pentatricopeptide repeat-containing protein At1g18485 [Cucumis sativus] >XP_0317... | [more] |
XP_008453326.1 | 0.0e+00 | 86.71 | PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Cucumis melo] ... | [more] |
TYJ98247.1 | 0.0e+00 | 86.51 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_022921451.1 | 0.0e+00 | 86.61 | pentatricopeptide repeat-containing protein At1g18485 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT1G18485.1 | 6.0e-303 | 52.93 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G57430.1 | 2.7e-178 | 39.53 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G03580.1 | 4.9e-164 | 35.91 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18750.1 | 1.9e-160 | 34.06 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G16480.1 | 2.9e-156 | 34.90 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |