Lsi06G013320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G013320
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDUF1666 domain-containing protein
Locationchr06: 23902789 .. 23905361 (+)
RNA-Seq ExpressionLsi06G013320
SyntenyLsi06G013320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTTATTAATTATTATTATAAAATTAAATGTGTGTGTGTGTTGGTGCTTTTCCTTTTCCTTTTGAAGAAGGGAGAGCACTTAGGAAGTGATTTTAGTCCAAAATAATCAAACAACATCAAAAATGCAATATTATTATTGCTCTAAAGATGAAGATGATGAAGCTCTTCTTAGGCTATTCTACAATCTCTCCTCCTCCTTCTTCCTTGTCTTCTTCTTCCTCTTCTTCTCTTCCATTTTACTTTTCAAATCCTTCTACTTCCTTGGCTCCCCTTTATTCCCAAGGTCATATTCATAACCAAAAATCCATATTTCCACTTTTTTTTTTTAATTTTATAATTTCTCTTCATCTTATTAATAATATACTTTTTGTATTGTTTTTGTAGAAATGAATACGAATATGAATATGAATACAACGCAGTGTCATCCGAGGAGGAGGAAAAAGAAGAGGAAGAAGGATATGGTAATGGAAACTATGGTAAAGTCGAACCGATGTCGTTTCTCGATAAAGAAGCTGAAACTCGGATGAGTCGATGGCAAAGCCAACTTCCAGATAATGAAGAAATATTATTAACAGACTTGGAGGAGCCTTGGATTACTATGGAATCCACAGACCTAGATGACCAAATTACAACTAATAGCTCAGTTTATGAGTCTCCACAAGCATCACAACTAGATGAATATTATCTACAAGAAGATGACGATCACGACGATCAGATGCCAGAAGAATTTACAGTGAGTTTGAAATGACTTTTGATTAAATTGTGAACTTTCTTCTTAGAAAAAAGGCATTATGGCTACACCCATCTTTGTGCAGCTCACTCAAGTACCCAACTTTTCTTTTTTAGAAATAAATATTTTCTTCCATGTGTGCAGCCTAACTGCACTCAAGTATATTACTCTTCTTAAAAGTAATTTCAAACTTGTTCGTTATCTGTGCAGGACTCGGAGCGGGTTGTGAGACAAGTATTGAAGGTGAATTCTCGTAGAATGTCATTGGACATGAAGAAGAAGAGATTGGTGGAGGATAATGATAATAGAAGAAATGAAAGTTATGGAAATTACATTAAGGAAGAAGGTGGTGGAAAGATTGTTGTTAAAGAGAATAATAATAATGGGAAATATTTGGTATTTGGAGCAAATGAATTATTGGTTAAAAAGAAAAAAGAAGAAGAAGAAGAAGAGATATTTGGGGATTCATGCACAGTTGGGTCAACTTCAAAGAGTTCATCAGAATGGAGAAGCTCAATAAATTGTAGAGATTCAGGAACTGAAGATCCATTTTCATCTTCTTCAAGAAGAAGCTGCCCCAAATGGGAATCCTACACTGTTTTCCAGAAATATGATGAAGAAATGATGTTTCTTGATAGAATCACTGCCCAAAAGCTTCATGAAACAGGTCACACTTTTCTTTTTCTTTCATTTAATTACTCTCTCCAAATTAATTTTATCAACTTTTTGACCCATTTTCTTAGTTTATTTTCCTTCCACCTTAAGTTAACAAAAAGATTCTATCTCTAATCCCATAGAATAAATCTAATACATAAAAAGTTTATATTCAAATATCGGATATTTTGGTGGTTGAACGTATTTTAGAGTTTTGTTCGATTTTAGTCTATATACTTTTTTAATAAATCTTAAATTTAATCTAGATAGCTAGTTTATTTTTTAATTTTTAGAAACTTTTTTTTTAGCTACCTAGTAGCATTTTCAATATAAATTTTTAAAACTTATTCACATATTGTATTTCCTTGCCTGAAAATTATTATTATTATTATTATTATTATGGTTTAAAAATTACTTTGGTCATTGTACTTTTGATTTTGGTTCATTTTGGTCCTTGTACTTTAAAAAAAATGACCATTTTGGTCCATTCATTTTCATTTTTACTTCATTTTTAAGGTATCAAAATGGTCACTTTTTAAAATTTCAAGGATCAAAAGGAACCAAAGTTGAAGGTTCAATGACAAAAATGAACATTTTGAAAGTACCGGACCAAAGTAGTATTCAAACATATTATTATTTAGCCAATTTCATTAAAAAAATAACAATAATAATTTTGAGAGACTAAATTTAATAGTTATAGAAAGTGTAGGGACCAAAATGATATTTTAACAAAAAAAAATTGTCTAGTCTATCATTATAATTCTTTTATTTTCTTTTTTCTACAATATATAGGGTGTGGAAATCGAAGCTCTATCCTCGAGATTGATAGTATAATTAACTCTTCTTAAATAATAGATACTCTATATATACACATATATATCATATAAATATATTAACAAAATAATCACAACTTTACATGAATAGCACATAATTAATTTAATTTTTTTAAAAAAAGTTCAACATATACTTTTCTGAATCTTTTTTCTTTAATAATTTATATCACAACAATGAGAATTAAAGTAGTAAATGAATCAACTTTTATATTCAAACCTCCTTAGTGCGATTTACTCTTTTTTTTTTTCAACTTTTTTAATGAATAATAACATAATAAATTGAACCTTTTTTTTTGTGTGTGTGTAAATTACAGAGTCATTGAGGTCAATTAAGATGTGCCCAAGATCAATATCA

mRNA sequence

TTTTTATTAATTATTATTATAAAATTAAATGTGTGTGTGTGTTGGTGCTTTTCCTTTTCCTTTTGAAGAAGGGAGAGCACTTAGGAAGTGATTTTAGTCCAAAATAATCAAACAACATCAAAAATGCAATATTATTATTGCTCTAAAGATGAAGATGATGAAGCTCTTCTTAGGCTATTCTACAATCTCTCCTCCTCCTTCTTCCTTGTCTTCTTCTTCCTCTTCTTCTCTTCCATTTTACTTTTCAAATCCTTCTACTTCCTTGGCTCCCCTTTATTCCCAAGAAATGAATACGAATATGAATATGAATACAACGCAGTGTCATCCGAGGAGGAGGAAAAAGAAGAGGAAGAAGGATATGGTAATGGAAACTATGGTAAAGTCGAACCGATGTCGTTTCTCGATAAAGAAGCTGAAACTCGGATGAGTCGATGGCAAAGCCAACTTCCAGATAATGAAGAAATATTATTAACAGACTTGGAGGAGCCTTGGATTACTATGGAATCCACAGACCTAGATGACCAAATTACAACTAATAGCTCAGTTTATGAGTCTCCACAAGCATCACAACTAGATGAATATTATCTACAAGAAGATGACGATCACGACGATCAGATGCCAGAAGAATTTACAGACTCGGAGCGGGTTGTGAGACAAGTATTGAAGGTGAATTCTCGTAGAATGTCATTGGACATGAAGAAGAAGAGATTGGTGGAGGATAATGATAATAGAAGAAATGAAAGTTATGGAAATTACATTAAGGAAGAAGGTGGTGGAAAGATTGTTGTTAAAGAGAATAATAATAATGGGAAATATTTGGTATTTGGAGCAAATGAATTATTGGTTAAAAAGAAAAAAGAAGAAGAAGAAGAAGAGATATTTGGGGATTCATGCACAGTTGGGTCAACTTCAAAGAGTTCATCAGAATGGAGAAGCTCAATAAATTGTAGAGATTCAGGAACTGAAGATCCATTTTCATCTTCTTCAAGAAGAAGCTGCCCCAAATGGGAATCCTACACTGTTTTCCAGAAATATGATGAAGAAATGATGTTTCTTGATAGAATCACTGCCCAAAAGCTTCATGAAACAGAGTCATTGAGGTCAATTAAGATGTGCCCAAGATCAATATCA

Coding sequence (CDS)

ATGCAATATTATTATTGCTCTAAAGATGAAGATGATGAAGCTCTTCTTAGGCTATTCTACAATCTCTCCTCCTCCTTCTTCCTTGTCTTCTTCTTCCTCTTCTTCTCTTCCATTTTACTTTTCAAATCCTTCTACTTCCTTGGCTCCCCTTTATTCCCAAGAAATGAATACGAATATGAATATGAATACAACGCAGTGTCATCCGAGGAGGAGGAAAAAGAAGAGGAAGAAGGATATGGTAATGGAAACTATGGTAAAGTCGAACCGATGTCGTTTCTCGATAAAGAAGCTGAAACTCGGATGAGTCGATGGCAAAGCCAACTTCCAGATAATGAAGAAATATTATTAACAGACTTGGAGGAGCCTTGGATTACTATGGAATCCACAGACCTAGATGACCAAATTACAACTAATAGCTCAGTTTATGAGTCTCCACAAGCATCACAACTAGATGAATATTATCTACAAGAAGATGACGATCACGACGATCAGATGCCAGAAGAATTTACAGACTCGGAGCGGGTTGTGAGACAAGTATTGAAGGTGAATTCTCGTAGAATGTCATTGGACATGAAGAAGAAGAGATTGGTGGAGGATAATGATAATAGAAGAAATGAAAGTTATGGAAATTACATTAAGGAAGAAGGTGGTGGAAAGATTGTTGTTAAAGAGAATAATAATAATGGGAAATATTTGGTATTTGGAGCAAATGAATTATTGGTTAAAAAGAAAAAAGAAGAAGAAGAAGAAGAGATATTTGGGGATTCATGCACAGTTGGGTCAACTTCAAAGAGTTCATCAGAATGGAGAAGCTCAATAAATTGTAGAGATTCAGGAACTGAAGATCCATTTTCATCTTCTTCAAGAAGAAGCTGCCCCAAATGGGAATCCTACACTGTTTTCCAGAAATATGATGAAGAAATGATGTTTCTTGATAGAATCACTGCCCAAAAGCTTCATGAAACAGAGTCATTGAGGTCAATTAAGATGTGCCCAAGATCAATATCA

Protein sequence

MQYYYCSKDEDDEALLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEYEYEYEYNAVSSEEEEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPDNEEILLTDLEEPWITMESTDLDDQITTNSSVYESPQASQLDEYYLQEDDDHDDQMPEEFTDSERVVRQVLKVNSRRMSLDMKKKRLVEDNDNRRNESYGNYIKEEGGGKIVVKENNNNGKYLVFGANELLVKKKKEEEEEEIFGDSCTVGSTSKSSSEWRSSINCRDSGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS
Homology
BLAST of Lsi06G013320 vs. ExPASy TrEMBL
Match: A0A1S3BW60 (uncharacterized protein LOC103494125 OS=Cucumis melo OX=3656 GN=LOC103494125 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 8.7e-137
Identity = 294/359 (81.89%), Postives = 310/359 (86.35%), Query Frame = 0

Query: 3   YYYCSKDEDDEA--LLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEYEYE 62
           YYYCSKDEDDEA  LL LFYNLSSSFFLVFFFL F+SILLFKSFYFLG+PLFPRN  EYE
Sbjct: 4   YYYCSKDEDDEALLLLTLFYNLSSSFFLVFFFLSFTSILLFKSFYFLGAPLFPRN--EYE 63

Query: 63  YEYNAVSS--EEEEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPDNEEILLTD 122
           YEYNAVSS  EEEE+EEEE YG+G YG     SFLDKEAETRMSRWQSQLPDNEEILLTD
Sbjct: 64  YEYNAVSSNEEEEEEEEEERYGSGIYG----TSFLDKEAETRMSRWQSQLPDNEEILLTD 123

Query: 123 LEEPWITMESTDLDDQITTNSSVYESPQ-ASQLDEYYLQEDDDHDDQMPEEFTDSERVVR 182
           LEEPWITMES DLDDQITTNSSVYESPQ A QLDE Y Q DDDHDDQMPEE TDSE+VVR
Sbjct: 124 LEEPWITMESIDLDDQITTNSSVYESPQSALQLDEQYPQGDDDHDDQMPEELTDSEQVVR 183

Query: 183 QVLKVNSRRMSLDMKKKRLVEDND----NRRNE-----SYG-NYIKEE---GGGKIVVKE 242
           QV+KVNS R+S+DMKKKRLVEDN+    NRRN+     SYG NY+K+    GGGKIV+KE
Sbjct: 184 QVMKVNSCRISMDMKKKRLVEDNNYNDHNRRNDDHDQISYGINYMKKNEALGGGKIVMKE 243

Query: 243 NNNNG--KYLVFGANELLVKKKK---EEEEEEIFGDSCTVGSTSKSSSEWRSSINCRD-- 302
           NNNN   KYLVF  NE+LV KKK   EEEEEEI+GDS T+GSTSKSSSEWRSSINCRD  
Sbjct: 244 NNNNNNEKYLVFRPNEILVNKKKKEEEEEEEEIYGDSYTIGSTSKSSSEWRSSINCRDSS 303

Query: 303 SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 337
           SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS
Sbjct: 304 SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 356

BLAST of Lsi06G013320 vs. ExPASy TrEMBL
Match: A0A0A0LPK2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023080 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 3.1e-134
Identity = 292/359 (81.34%), Postives = 312/359 (86.91%), Query Frame = 0

Query: 1   MQYYY-CSKDEDDE--ALLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEY 60
           MQYYY CSKDEDD+   LL LFYNLSSSFFLVFFFL F+SILLFKSFYFLG+PLFPRN  
Sbjct: 1   MQYYYCCSKDEDDDQALLLSLFYNLSSSFFLVFFFLSFTSILLFKSFYFLGAPLFPRN-- 60

Query: 61  EYEYEYNAVSS--EEEEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPDNEEIL 120
           EYEYEYNAVSS  EEEE+EEEE YG+G YG     SFLDKEAETRMSRWQSQLPDNEEIL
Sbjct: 61  EYEYEYNAVSSNQEEEEEEEEERYGSGIYG----TSFLDKEAETRMSRWQSQLPDNEEIL 120

Query: 121 LTDLEEPWITMESTDLDDQITTNSSVYESPQAS-QLDEYYLQEDDDHDDQMPEEFTDSER 180
           LTDLEEPWITMES DLDDQITTNSSVYESPQA+ QLDE YLQE +DHDDQMPEE TDSE+
Sbjct: 121 LTDLEEPWITMESIDLDDQITTNSSVYESPQAALQLDEQYLQE-NDHDDQMPEELTDSEQ 180

Query: 181 VVRQVLKVNSRRMSLDMKKKRLVEDND---NRRNE----SYG-NYIKEEG---GGKIVVK 240
           VVRQV+KVNS R+S+DMKKKRLVEDN+    RRN+    SYG NY+K+E    GGKIV+K
Sbjct: 181 VVRQVMKVNSCRISMDMKKKRLVEDNNKDHKRRNDDDQISYGINYMKKEEELCGGKIVIK 240

Query: 241 ENNNNG--KYLVFGANELLVKKKKEEEEE--EIFGDSCTVGSTSKSSSEWRSSINCRD-- 300
           ENNNN   KYLVF  NE+LV KKK+EEEE  EI+GDS T+GSTSKSSSEWRSSINCRD  
Sbjct: 241 ENNNNNNEKYLVFRPNEILVNKKKKEEEEDQEIYGDSYTIGSTSKSSSEWRSSINCRDSS 300

Query: 301 SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 337
           SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS
Sbjct: 301 SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 352

BLAST of Lsi06G013320 vs. ExPASy TrEMBL
Match: A0A5A7UWT2 (DUF1666 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003820 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.0e-97
Identity = 211/257 (82.10%), Postives = 223/257 (86.77%), Query Frame = 0

Query: 101 MSRWQSQLPDNEEILLTDLEEPWITMESTDLDDQITTNSSVYESPQ-ASQLDEYYLQEDD 160
           MSRWQSQLPDNEEILLTDLEEPWITMES DLDDQITTNSSVYESPQ A QLDE Y Q DD
Sbjct: 1   MSRWQSQLPDNEEILLTDLEEPWITMESIDLDDQITTNSSVYESPQSALQLDEQYPQGDD 60

Query: 161 DHDDQMPEEFTDSERVVRQVLKVNSRRMSLDMKKKRLVEDND----NRRNE-----SYG- 220
           DHDDQMPEE TDSE+VVRQV+KVNS R+S+DMKKKRLVEDN+    NRRN+     SYG 
Sbjct: 61  DHDDQMPEELTDSEQVVRQVMKVNSCRISMDMKKKRLVEDNNYNDHNRRNDDHDQISYGI 120

Query: 221 NYIKEE---GGGKIVVKENNNNG--KYLVFGANELLVKKKK---EEEEEEIFGDSCTVGS 280
           NY+K+    GGGKIV+KENNNN   KYLVF  NE+LV KKK   EEEEEEI+GDS T+GS
Sbjct: 121 NYMKKNEALGGGKIVMKENNNNNNEKYLVFRPNEILVNKKKKEEEEEEEEIYGDSYTIGS 180

Query: 281 TSKSSSEWRSSINCRD--SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKL 337
           TSKSSSEWRSSINCRD  SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKL
Sbjct: 181 TSKSSSEWRSSINCRDSSSGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKL 240

BLAST of Lsi06G013320 vs. ExPASy TrEMBL
Match: A0A6J1BYH0 (uncharacterized protein LOC111006887 OS=Momordica charantia OX=3673 GN=LOC111006887 PE=4 SV=1)

HSP 1 Score: 356.7 bits (914), Expect = 1.1e-94
Identity = 225/337 (66.77%), Postives = 256/337 (75.96%), Query Frame = 0

Query: 3   YYYCSKDEDDEALLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEYEYEYE 62
           YYYCSK +D EALLRLFYNLSSSFFLVFFF+ FSSILLFK F FLG+PLFPRN  EYEYE
Sbjct: 33  YYYCSK-QDQEALLRLFYNLSSSFFLVFFFISFSSILLFKFFNFLGTPLFPRN--EYEYE 92

Query: 63  YNAVSSEEEEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPDNEEILLTDLEEP 122
           YN  S EEEE+EEEEGY  G     E +SFL++EAETRMSRWQSQLPD E +L TDLEEP
Sbjct: 93  YNMSSEEEEEEEEEEGYDEG-----ETVSFLNEEAETRMSRWQSQLPDEESLLFTDLEEP 152

Query: 123 WITMESTDLDDQITT-NSSVYESPQASQLDEYYLQEDDDHDDQMPEEFTDSERVVRQVLK 182
           W  M  ++ D QITT NSSVYESP+ S       + DDD D       TD ++ + + LK
Sbjct: 153 W-AMGPSEPDGQITTNNSSVYESPRTS-------KSDDDEDQHQQVIITDDDQHIIKQLK 212

Query: 183 VNSRRMSLDMKK-KRL-VEDNDNRRNESYGNYIKEEGGGKIVVKENNNNGKYLVFGANEL 242
           +NS R+SL++KK KRL VE+ + ++N    N  + E G        N+N KYLVF A ++
Sbjct: 213 LNS-RISLELKKSKRLXVEEEEKKKN----NICENENG--------NSNNKYLVFAATKM 272

Query: 243 LVKKKKEEEEEEIFGDSCTVGSTSKSSSEWRSSINCRDSGTEDPFSSSSRRSCPKWESYT 302
           +      E+EEEIFGDSCTVGSTSKSSSEWRSSI  RDSGTEDPFSSSSRRSCPKWESYT
Sbjct: 273 V------EKEEEIFGDSCTVGSTSKSSSEWRSSI--RDSGTEDPFSSSSRRSCPKWESYT 332

Query: 303 VFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 337
           VFQKYDEEMMFLDRITAQKLHETESLRSI+MCPRSIS
Sbjct: 333 VFQKYDEEMMFLDRITAQKLHETESLRSIQMCPRSIS 332

BLAST of Lsi06G013320 vs. ExPASy TrEMBL
Match: A0A6J1KKR9 (uncharacterized protein LOC111496143 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111496143 PE=4 SV=1)

HSP 1 Score: 354.4 bits (908), Expect = 5.3e-94
Identity = 213/329 (64.74%), Postives = 251/329 (76.29%), Query Frame = 0

Query: 11  DDEALLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEYEYEYEYNAVSSEE 70
           ++EA+LRLFYNLS+SFFL+FFF+ FSSILLFK  +FLG+PLFPRNEYEYEY ++  S EE
Sbjct: 16  EEEAVLRLFYNLSTSFFLLFFFISFSSILLFKFLHFLGTPLFPRNEYEYEYNFS--SEEE 75

Query: 71  EEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPD-NEEILLTDLEEPWITMEST 130
           EE+EEEEGYGNG +G+   +S+LD+EAETRMSRWQ QLPD  EE+LLTDLEEPWI M+ST
Sbjct: 76  EEEEEEEGYGNGIHGETGTVSYLDEEAETRMSRWQRQLPDEEEEVLLTDLEEPWI-MDST 135

Query: 131 DLDDQITTNSSVYESPQASQLDEYYLQED--DDHDDQMPEEFTDSERVVRQVLKVNSRRM 190
           D D Q TTNSSVYESPQA +  +Y+  +D  ++ D QMPE+                 + 
Sbjct: 136 DPDGQTTTNSSVYESPQALEQHQYHQHQDEEEEEDHQMPEQL----------------KG 195

Query: 191 SLDMKKKRLVEDNDNRRNESYGNYIKEEGGGKIVVKENNNNGKYLVFGANELLVKKKKEE 250
           SL+  K+R    ++NR+ E       EE      VK+ N N KYLVF A +++ K     
Sbjct: 196 SLEEDKRR---GDENRKKE-------EE------VKKVNENEKYLVFAATKMVKK----- 255

Query: 251 EEEEIFGDSCTVGSTSKSSSEWRSSINCRDSGTEDPFSSSSRRSCPKWESYTVFQKYDEE 310
           EEEEIFGDSCTVGSTSKSSSEWRSSINCRDSGT+DPFSSSSRRSCPKWESYTVFQKYDEE
Sbjct: 256 EEEEIFGDSCTVGSTSKSSSEWRSSINCRDSGTDDPFSSSSRRSCPKWESYTVFQKYDEE 304

Query: 311 MMFLDRITAQKLHETESLRSIKMCPRSIS 337
           MMFL RITAQKLHETESLR I+MCPRS+S
Sbjct: 316 MMFLHRITAQKLHETESLRLIQMCPRSVS 304

BLAST of Lsi06G013320 vs. NCBI nr
Match: XP_038901240.1 (uncharacterized protein LOC120088168 [Benincasa hispida])

HSP 1 Score: 540.8 bits (1392), Expect = 8.3e-150
Identity = 306/340 (90.00%), Postives = 314/340 (92.35%), Query Frame = 0

Query: 3   YYYCSKDEDDEALLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEYEYEYE 62
           YYYCSKDEDDEAL+RLFYNLSSSFFLVFFFL FSSILLFKSFYFLGSPLFPRN  EYEYE
Sbjct: 4   YYYCSKDEDDEALVRLFYNLSSSFFLVFFFLSFSSILLFKSFYFLGSPLFPRN--EYEYE 63

Query: 63  YNAVSSEE--EEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPDNEEILLTDLE 122
           YNAVSSEE  EE+EEEEGYGNG YGKVE MSFLDKEAETRMSRWQ QLPDNEEILLTD+E
Sbjct: 64  YNAVSSEEGKEEEEEEEGYGNGIYGKVEAMSFLDKEAETRMSRWQRQLPDNEEILLTDME 123

Query: 123 EPWITMESTDLDDQITTNSSVYESPQASQLDEYYLQEDDDHDDQMPEEFTDSERVVRQVL 182
           EPWITMESTDLDDQITTNSSVYESPQ SQLDEY+ QEDDD DDQM EE TDSERVVRQVL
Sbjct: 124 EPWITMESTDLDDQITTNSSVYESPQTSQLDEYHHQEDDDDDDQMLEELTDSERVVRQVL 183

Query: 183 KVNSRRMSLDMKKKRLVEDNDNRRNES-YGNYI--KEEGGGKIVVKENNNNGKYLVFGAN 242
           KVNS RMSLD+KKKRLVEDNDNRRNES YGNY+  KEE   +IVVKE NNNGKYLVFGAN
Sbjct: 184 KVNSCRMSLDLKKKRLVEDNDNRRNESYYGNYLMKKEE---EIVVKE-NNNGKYLVFGAN 243

Query: 243 ELLVKKKKEEEEEEIFGDSCTVGSTSKSSSEWRSSINCRD-SGTEDPFSSSSRRSCPKWE 302
           ELL +K K  EEEEIFGDSCTVGSTSKSSSEWRSSINCRD SGTEDPFSSSSRRSCPKWE
Sbjct: 244 ELLDRKSK--EEEEIFGDSCTVGSTSKSSSEWRSSINCRDSSGTEDPFSSSSRRSCPKWE 303

Query: 303 SYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 337
           SYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS
Sbjct: 304 SYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 335

BLAST of Lsi06G013320 vs. NCBI nr
Match: XP_008453394.1 (PREDICTED: uncharacterized protein LOC103494125 [Cucumis melo])

HSP 1 Score: 496.5 bits (1277), Expect = 1.8e-136
Identity = 294/359 (81.89%), Postives = 310/359 (86.35%), Query Frame = 0

Query: 3   YYYCSKDEDDEA--LLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEYEYE 62
           YYYCSKDEDDEA  LL LFYNLSSSFFLVFFFL F+SILLFKSFYFLG+PLFPRN  EYE
Sbjct: 4   YYYCSKDEDDEALLLLTLFYNLSSSFFLVFFFLSFTSILLFKSFYFLGAPLFPRN--EYE 63

Query: 63  YEYNAVSS--EEEEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPDNEEILLTD 122
           YEYNAVSS  EEEE+EEEE YG+G YG     SFLDKEAETRMSRWQSQLPDNEEILLTD
Sbjct: 64  YEYNAVSSNEEEEEEEEEERYGSGIYG----TSFLDKEAETRMSRWQSQLPDNEEILLTD 123

Query: 123 LEEPWITMESTDLDDQITTNSSVYESPQ-ASQLDEYYLQEDDDHDDQMPEEFTDSERVVR 182
           LEEPWITMES DLDDQITTNSSVYESPQ A QLDE Y Q DDDHDDQMPEE TDSE+VVR
Sbjct: 124 LEEPWITMESIDLDDQITTNSSVYESPQSALQLDEQYPQGDDDHDDQMPEELTDSEQVVR 183

Query: 183 QVLKVNSRRMSLDMKKKRLVEDND----NRRNE-----SYG-NYIKEE---GGGKIVVKE 242
           QV+KVNS R+S+DMKKKRLVEDN+    NRRN+     SYG NY+K+    GGGKIV+KE
Sbjct: 184 QVMKVNSCRISMDMKKKRLVEDNNYNDHNRRNDDHDQISYGINYMKKNEALGGGKIVMKE 243

Query: 243 NNNNG--KYLVFGANELLVKKKK---EEEEEEIFGDSCTVGSTSKSSSEWRSSINCRD-- 302
           NNNN   KYLVF  NE+LV KKK   EEEEEEI+GDS T+GSTSKSSSEWRSSINCRD  
Sbjct: 244 NNNNNNEKYLVFRPNEILVNKKKKEEEEEEEEIYGDSYTIGSTSKSSSEWRSSINCRDSS 303

Query: 303 SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 337
           SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS
Sbjct: 304 SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 356

BLAST of Lsi06G013320 vs. NCBI nr
Match: XP_004138345.1 (uncharacterized protein LOC101203868 [Cucumis sativus] >KGN63820.1 hypothetical protein Csa_013131 [Cucumis sativus])

HSP 1 Score: 488.0 bits (1255), Expect = 6.4e-134
Identity = 292/359 (81.34%), Postives = 312/359 (86.91%), Query Frame = 0

Query: 1   MQYYY-CSKDEDDE--ALLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEY 60
           MQYYY CSKDEDD+   LL LFYNLSSSFFLVFFFL F+SILLFKSFYFLG+PLFPRN  
Sbjct: 1   MQYYYCCSKDEDDDQALLLSLFYNLSSSFFLVFFFLSFTSILLFKSFYFLGAPLFPRN-- 60

Query: 61  EYEYEYNAVSS--EEEEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPDNEEIL 120
           EYEYEYNAVSS  EEEE+EEEE YG+G YG     SFLDKEAETRMSRWQSQLPDNEEIL
Sbjct: 61  EYEYEYNAVSSNQEEEEEEEEERYGSGIYG----TSFLDKEAETRMSRWQSQLPDNEEIL 120

Query: 121 LTDLEEPWITMESTDLDDQITTNSSVYESPQAS-QLDEYYLQEDDDHDDQMPEEFTDSER 180
           LTDLEEPWITMES DLDDQITTNSSVYESPQA+ QLDE YLQE +DHDDQMPEE TDSE+
Sbjct: 121 LTDLEEPWITMESIDLDDQITTNSSVYESPQAALQLDEQYLQE-NDHDDQMPEELTDSEQ 180

Query: 181 VVRQVLKVNSRRMSLDMKKKRLVEDND---NRRNE----SYG-NYIKEEG---GGKIVVK 240
           VVRQV+KVNS R+S+DMKKKRLVEDN+    RRN+    SYG NY+K+E    GGKIV+K
Sbjct: 181 VVRQVMKVNSCRISMDMKKKRLVEDNNKDHKRRNDDDQISYGINYMKKEEELCGGKIVIK 240

Query: 241 ENNNNG--KYLVFGANELLVKKKKEEEEE--EIFGDSCTVGSTSKSSSEWRSSINCRD-- 300
           ENNNN   KYLVF  NE+LV KKK+EEEE  EI+GDS T+GSTSKSSSEWRSSINCRD  
Sbjct: 241 ENNNNNNEKYLVFRPNEILVNKKKKEEEEDQEIYGDSYTIGSTSKSSSEWRSSINCRDSS 300

Query: 301 SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 337
           SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS
Sbjct: 301 SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 352

BLAST of Lsi06G013320 vs. NCBI nr
Match: KAA0058075.1 (DUF1666 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 2.1e-97
Identity = 211/257 (82.10%), Postives = 223/257 (86.77%), Query Frame = 0

Query: 101 MSRWQSQLPDNEEILLTDLEEPWITMESTDLDDQITTNSSVYESPQ-ASQLDEYYLQEDD 160
           MSRWQSQLPDNEEILLTDLEEPWITMES DLDDQITTNSSVYESPQ A QLDE Y Q DD
Sbjct: 1   MSRWQSQLPDNEEILLTDLEEPWITMESIDLDDQITTNSSVYESPQSALQLDEQYPQGDD 60

Query: 161 DHDDQMPEEFTDSERVVRQVLKVNSRRMSLDMKKKRLVEDND----NRRNE-----SYG- 220
           DHDDQMPEE TDSE+VVRQV+KVNS R+S+DMKKKRLVEDN+    NRRN+     SYG 
Sbjct: 61  DHDDQMPEELTDSEQVVRQVMKVNSCRISMDMKKKRLVEDNNYNDHNRRNDDHDQISYGI 120

Query: 221 NYIKEE---GGGKIVVKENNNNG--KYLVFGANELLVKKKK---EEEEEEIFGDSCTVGS 280
           NY+K+    GGGKIV+KENNNN   KYLVF  NE+LV KKK   EEEEEEI+GDS T+GS
Sbjct: 121 NYMKKNEALGGGKIVMKENNNNNNEKYLVFRPNEILVNKKKKEEEEEEEEIYGDSYTIGS 180

Query: 281 TSKSSSEWRSSINCRD--SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKL 337
           TSKSSSEWRSSINCRD  SGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKL
Sbjct: 181 TSKSSSEWRSSINCRDSSSGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKL 240

BLAST of Lsi06G013320 vs. NCBI nr
Match: XP_022134676.1 (uncharacterized protein LOC111006887 [Momordica charantia])

HSP 1 Score: 356.7 bits (914), Expect = 2.2e-94
Identity = 225/337 (66.77%), Postives = 256/337 (75.96%), Query Frame = 0

Query: 3   YYYCSKDEDDEALLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGSPLFPRNEYEYEYE 62
           YYYCSK +D EALLRLFYNLSSSFFLVFFF+ FSSILLFK F FLG+PLFPRN  EYEYE
Sbjct: 33  YYYCSK-QDQEALLRLFYNLSSSFFLVFFFISFSSILLFKFFNFLGTPLFPRN--EYEYE 92

Query: 63  YNAVSSEEEEKEEEEGYGNGNYGKVEPMSFLDKEAETRMSRWQSQLPDNEEILLTDLEEP 122
           YN  S EEEE+EEEEGY  G     E +SFL++EAETRMSRWQSQLPD E +L TDLEEP
Sbjct: 93  YNMSSEEEEEEEEEEGYDEG-----ETVSFLNEEAETRMSRWQSQLPDEESLLFTDLEEP 152

Query: 123 WITMESTDLDDQITT-NSSVYESPQASQLDEYYLQEDDDHDDQMPEEFTDSERVVRQVLK 182
           W  M  ++ D QITT NSSVYESP+ S       + DDD D       TD ++ + + LK
Sbjct: 153 W-AMGPSEPDGQITTNNSSVYESPRTS-------KSDDDEDQHQQVIITDDDQHIIKQLK 212

Query: 183 VNSRRMSLDMKK-KRL-VEDNDNRRNESYGNYIKEEGGGKIVVKENNNNGKYLVFGANEL 242
           +NS R+SL++KK KRL VE+ + ++N    N  + E G        N+N KYLVF A ++
Sbjct: 213 LNS-RISLELKKSKRLXVEEEEKKKN----NICENENG--------NSNNKYLVFAATKM 272

Query: 243 LVKKKKEEEEEEIFGDSCTVGSTSKSSSEWRSSINCRDSGTEDPFSSSSRRSCPKWESYT 302
           +      E+EEEIFGDSCTVGSTSKSSSEWRSSI  RDSGTEDPFSSSSRRSCPKWESYT
Sbjct: 273 V------EKEEEIFGDSCTVGSTSKSSSEWRSSI--RDSGTEDPFSSSSRRSCPKWESYT 332

Query: 303 VFQKYDEEMMFLDRITAQKLHETESLRSIKMCPRSIS 337
           VFQKYDEEMMFLDRITAQKLHETESLRSI+MCPRSIS
Sbjct: 333 VFQKYDEEMMFLDRITAQKLHETESLRSIQMCPRSIS 332

BLAST of Lsi06G013320 vs. TAIR 10
Match: AT1G73850.1 (Protein of unknown function (DUF1666) )

HSP 1 Score: 144.4 bits (363), Expect = 1.6e-34
Identity = 141/363 (38.84%), Postives = 189/363 (52.07%), Query Frame = 0

Query: 11  DDEALLRLFYNLSSSFFLVFFFLFFSSILLFKSFYFLGS-PLFPRNEYEYEYEYNAVSSE 70
           ++EAL  LF N+S+SFFL+   L+ +  LL K  +F+G  PL  RNE EY+    A  SE
Sbjct: 6   NEEALASLFINVSTSFFLLLILLYSAVSLLIKLLHFIGGYPLLQRNEDEYDSA--AWYSE 65

Query: 71  EEEKEEEEGYG-----NGNYGKV--EPMSFL------DKEAETRMSRWQSQLPDNEEILL 130
           EEE+EEEEG       N +Y  +  +P   L      D E+    +       +N+    
Sbjct: 66  EEEEEEEEGEELKMSCNSSYHVISRDPNPDLIADIADDGESLVFYNNISQGGVNNQHTKE 125

Query: 131 TDLEEPWITMESTDLDDQITTNSSVYESPQASQLDEY----YLQEDDDHDDQMPEEFTDS 190
            +        E  + DDQ +  SS  E   ++ +  Y     ++E+DD  + +P++  D 
Sbjct: 126 FNNVYQTHEHEEEEEDDQDSNTSSTEEHFSSANVSPYRSESSIEEEDDGVEDLPDDRYDD 185

Query: 191 ----------------ERVVRQVLKVNSRRMSLDMKKKRLVEDNDNRRNESYGNYIKEEG 250
                           E +VR+     S R     +   +  D      E   N     G
Sbjct: 186 DDEDEEVGGVSRYDVVEDLVRKQPNTTSTRGPSRFQSGLVFNDKSYNAREFVSN-----G 245

Query: 251 GGKIVVKENNNNGKYLVFGANELLVKKKKEEEEEE---IFGDSCTVGSTSKSSSEWRSSI 310
           G K  V E   +     F   E+  ++ +EEEEEE   IFG+SCT GSTSKSSSEWR+S+
Sbjct: 246 GIKNDVDEIQPSSG---FDMREIKAEELEEEEEEERGQIFGESCTNGSTSKSSSEWRNSV 305

Query: 311 NCRDSGTEDPFSSSSRRSCPKWESYTVFQKYDEEMMFLDRITAQKLHETESLRSIKMCPR 337
                 T+DPFS+SSRRSCPKWESYTVFQKYDEEM FL RI+AQKLHE ESL+SI + PR
Sbjct: 306 K-----TDDPFSTSSRRSCPKWESYTVFQKYDEEMTFLTRISAQKLHEAESLKSIMVEPR 353

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1S3BW608.7e-13781.89uncharacterized protein LOC103494125 OS=Cucumis melo OX=3656 GN=LOC103494125 PE=... [more]
A0A0A0LPK23.1e-13481.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G023080 PE=4 SV=1[more]
A0A5A7UWT21.0e-9782.10DUF1666 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A6J1BYH01.1e-9466.77uncharacterized protein LOC111006887 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A6J1KKR95.3e-9464.74uncharacterized protein LOC111496143 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
Match NameE-valueIdentityDescription
XP_038901240.18.3e-15090.00uncharacterized protein LOC120088168 [Benincasa hispida][more]
XP_008453394.11.8e-13681.89PREDICTED: uncharacterized protein LOC103494125 [Cucumis melo][more]
XP_004138345.16.4e-13481.34uncharacterized protein LOC101203868 [Cucumis sativus] >KGN63820.1 hypothetical ... [more]
KAA0058075.12.1e-9782.10DUF1666 domain-containing protein [Cucumis melo var. makuwa][more]
XP_022134676.12.2e-9466.77uncharacterized protein LOC111006887 [Momordica charantia][more]
Match NameE-valueIdentityDescription
AT1G73850.11.6e-3438.84Protein of unknown function (DUF1666) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..293
NoneNo IPR availablePANTHERPTHR46702DNA LIGASE (DUF1666)-RELATEDcoord: 12..336
NoneNo IPR availablePANTHERPTHR46702:SF2DNA LIGASE (DUF1666)coord: 12..336

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G013320.1Lsi06G013320.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane