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Lsi06G013160 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTATAAATTTTGCTTTTCTCACCATTATATCATCTTCTTCTTTTATAACACACTCTCTGGTTCAAGCTTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCACTTTCCTTCTCGTCTGGTTTCTTAATTCACACAAAACGCATTTGGGTCATTCATTGCGTGCATTCTTCAAATCTTTTCTACGAAGTTTTTGAATCGAGTTTCACTTCTCTTCTTCGTTCAATCGATTTGAAATCCTCTGTTATTTTGGGTTCTTTCTGATCTGATATTGTATTGTCAACATCCTCCATTCAATTCATTGTTCTTGAGACAAGATTTCGAGTCTTGTTTTACAAGAAGAAAGCTGGGTTTAAAGAATTTGCAACCCTTTTCTTGTAAACGCCATTTTCATCGGCTTTGTTCTACTTGGGGGAGTTTAAAGAAACCGATATAATCTTCTTTTGTTCTGGTGGGTTGAGTTCTTTTTTCCCATTTTAGAGAAATTTGGGGTTTCCCATAATAATCTGTGTAATTTCCTCCGTTTTCCATTGATACCGAACGGAGGATTCTTCTTTTGGGTTAGAAATGTTGGGAACTGCGTTGCAGTTTGGGGGAATCAAAGGTGAGGATCGGTTTTATATTCCGGTAAGGGCACGAAAGAATTATAATCAGCAAAAGCAATCGAGGAGACCTACCAAGACCGATGAAACTGAGAGCCCATCGAGTAAAGTTGTGGCTTCTACTATAAAGCCTTCTAAGCAATTAACTCCTCAGTCTAAGAGCAACTTAGAGAGATTCTTGGAGGCCACAAGGCCTTCAGTTCCAGCGCAGTATTTCTCTAAGGTAAATGTTTAGAATCAAAGAAAGTTGGTTACATATAATCTTGATTGGTTTCTTCTTAAATTATAGTTAATAACCAAATTAGGATCATAATCTTGATTCGAGTTCGGTTTCTTGTGGCCCTTTAATGGTTTTCTTGGCTATTTTCTGCATTTACCAGTTTTAGAACTCTAAGTAAATGATCCCTTCCGAGAGTTCTTTGTTTTTGTTTTTCTTTTTTCCTGGGAGATTTGAATTTGTGATATTGTCTTCTTTCCAGACAACTATGAGGGATTGGAGGACTTGTGACATTGAGTTTCAACCTTATTTCATTCTGAATGATCTGTGGGAGTCTTTCAAGGAGTGGAGTGCATATGGCGCTGGAGTTCCTTTAGTTCTTAATGGAGGTGATTCTGTTGTTCAATATTACGTTCCATATTTGTCTGGTATCCAAATATATGGTGAAGCTTCTGCACTGAGACCAGATTCTAACTCCAGGTACTTGATCTCCGTTTGGAATATGTTCATCCATATCAGTACTTGAATTCTTCTGGTTGAAATAAACTATATCTGTTTTTAATGTTCTGTGAGTGTGAGGTTTATTTTACTAAGATGTATATTCTACTCTAATGTGAGTTTTCTTTTAGATGTGATCATGAATTTTTTCCACCATTCTTAACGTATGAGAACATTGGTTTTACTCTGATGGTGATTTTTTCGATGTTTCTTTATATTAGTAGGCTGGCTAGTGAGGACAGTGATCTTGACTCTTTTAGAGATACAAGCAGCGATGGAAGCATTGACTATGAGTTTGGAAAAATCTGTAACTTTTCTAGTGAACAGTGGGTTCATCACCATCTAGCTTGTGAAAACACACTGAAAATGAGAAATACGTCTTTAACTGATGAACATAGAACGATACAAGAAGGTTTTTCGAGTGATGATGCGGATGCAGGATATCATCGAAGTGGTTTGCTCTTTCAGTTTCTTGAGCATGATCTTCCTTATCAACGTGTACCATTGGCTGATAAAGTTAGTTGGTTTCTTATTGGTTCATTTAGTAGTTATATTGTTGCATGTTTTGCTATTTCAAGAACCGTATTAGTTTACTAATATTTTTTATGTAATGACAGATATTTGAACTTGCTTTCCAATTTCCTGGTTTGAAAACGTTAAGAAGTTGTGATATCCTGTCAGCCAGCTGGGTCTCTGTAGCATGGTAAGTATTTGCGGATTGAATGTTATTACTAGTTTTGCATACCATGCTATTCATTTCCTCCACTGGAATTGTAGGTACCCTATTTACCGTATACCCACCGGTCCGACATTAAAAGATTTGGATGCTTGCTTCTTAACATATCATTCCCTTTCCACACCAGGTAATATGGCATTCTTAGTTCTCTACTGTAACTTTTTAGGTAATCTTCAAGATATGTGTTCTCTAGGCTCCATTCACTCATTTGTCGACTAAATAAACCCATTAACTTCTGCTGAGGTTACTGCCATAAGATGAATTAGAACAAGCAATCATCGCCTAAGAAGCACGGACACTTTAGTTTGGCTAGCGTGTCTGTGTCCGATACCGACACTTGTTGGACACGTACTGGACACTTGTTAGTGCAACAAATGTGTTAAGACATGCATAGAACACTTGTTGAGTAGACTAAAAAGACACATATATGACAATAATAACAACTTTTGAGAGTGAAATACATCAAGCTAAGTTTTTTAAGCATATAAATGCATCCAACCTATTTACTTAGAATTTTCTTTCGGTATAAAAATAATATATATTTTTAAAAATGTACATTTTAATAAGTGTGTCTTTGCCGTGTCGTGTTGTAGATTTTTAAAATATGGCGTGTCCCCGTGTCCGGTCGTGTCGTATTCGTGTCTCGTATTTGTATATGTATCTGTGCTTCTTAGATCATCGCCATAGTTCTTCTGACATCTCACTCTCATAAAAATGTTGTTTCTTCTTTTCCGTAACTTTTATCCTTCTTATTGATAAAGCTTGTTGTTATTAGCCAAGTATAAGTCAACCCCATATTAACTGATTGTTGAAAGAATGACCCTTTCCCTGTGACTGGCCATGTCAGAGGTAAGTTAATTCTTTTCAGGTTCGAACTGACCAATAAATTCATTGATGTTTACATATTTGGAGCTATATTGTGTTAAATCATGGATTGTGTAAGAATTAAGATGCATTATTCTCATGTGCATACAATATCTCCATATTTTGTCTAATAAACTAAATTTAGGCTTGTGTTCATTCTTCATCGTGTCCTCACCACGCTCGCTGAAAGTTTATTCAAGATTTTGAGTGACTTTTCAAATTTTGTAAAATCTGAATAACACATTAAATATTATTTTTCCACCAACTCCTTGTACATTTCATTTTGGAGCTTATTCATTGCTTCTGTGCTCATCTTTTAAGCCTCGTTTCTGCTCGAGAAATTTTTTATTACATCAGCTTATTTCTAGAATGACTCAATATTTCGTTGTTCTGACGTTTAGCTTGTTTGTTTCAAAATATAAAATATATTATCCATTTTCTGCTTCATCCAGGGCTGTTACTTACTTGAGCCTGTCCTAGTCACTAGCCACCATTGTCTACAAAAATCCAATTTTCCTACTGTTGTCAATCATCATCTATTTGGCTTGTTCTCCACAAGTGTTGATCGTTTTCGTTGCTTCACAGGTAATGGACATGGTCTGCCACCAGTAATGATATATCCAAAGGACATTGATGGTATCGCAAAGGTCTCCTTGCCTGTTTTTGGATTGGCTTCTTATAAGCTGAAAGGATCGATATGGGGGCAAAATGGCGTCAACGAGCATCAAACGGCAAATTCTCTCATGCAGGCAGCAGATAAGTGGCTGAGGAGCCTTCAGGTCGTTCAACCTGATTTTCAGTTCTTTGCATCACATGGGACATACTGGAGATGACAGGAGATGACTCAAGATATAATCTACTTCTCTGCTGCCCATTCGAACTATCAAAATAACAAATTTGTGCCCTTATCAACTATTTGACCTGCCTTCAATACTGGTAAGGATATATTTTGATTTTTGGTGGTTTCTTCTTTCTGGAAATACATTTCGTGGAGGCAGTTAAGAAAAATGTTCGCAGCAGCTGGTTAGAACCGTGTGTAAAATGGGGGAGGAGAGTAATAAAACTGTGAAATGGGAGTAGTAGCAGAACAGGGCTGATGTGAAGTGGAATTTTGAAGGGCAAAAGCAATATGGAGATTGGAAACTGATGGCAATCAAGCTGAAGGTTGTCTATCATTCTACACTGACCTTGGAAACTTGTGAGAACTCATTCTCTATTTCTACACTCCCATAAAATTTAGAGTCATTGTTTGTCTTGTTTTGTGAACTTCAAGAAGTACAAATTTCCATGTATATTACATATGTTTTGATGTTGGGCATCTTTTTTAGATTCACACAAGTATAGATGAGAAATATTAGATGGAATTCTATATTGTAAGAAGAAATATTATATTTGTAGCATTTTGTAGTTTCGAATATGCATCATTCTGGATTGAACAGGAATCATATTCCCTCCCCATCCAACATTGGTAGAATTTGTACCATTTAAAATATTCAGAAGGGAATGTGGGAATGGAGAATCAGTGTTCTTTTCCCCCTTGATTGATGTGAAACCGTCTAGGAATAGTATTCTGTTTGTG TTTCTATAAATTTTGCTTTTCTCACCATTATATCATCTTCTTCTTTTATAACACACTCTCTGGTTCAAGCTTCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGCACTTTCCTTCTCGTCTGGTTTCTTAATTCACACAAAACGCATTTGGGTCATTCATTGCGTGCATTCTTCAAATCTTTTCTACGAAGTTTTTGAATCGAGTTTCACTTCTCTTCTTCGTTCAATCGATTTGAAATCCTCTGTTATTTTGGGTTCTTTCTGATCTGATATTGTATTGTCAACATCCTCCATTCAATTCATTGTTCTTGAGACAAGATTTCGAGTCTTGTTTTACAAGAAGAAAGCTGGGTTTAAAGAATTTGCAACCCTTTTCTTGTAAACGCCATTTTCATCGGCTTTGTTCTACTTGGGGGAGTTTAAAGAAACCGATATAATCTTCTTTTGTTCTGGTGGGTTGAGTTCTTTTTTCCCATTTTAGAGAAATTTGGGGTTTCCCATAATAATCTGTGTAATTTCCTCCGTTTTCCATTGATACCGAACGGAGGATTCTTCTTTTGGGTTAGAAATGTTGGGAACTGCGTTGCAGTTTGGGGGAATCAAAGGTGAGGATCGGTTTTATATTCCGGTAAGGGCACGAAAGAATTATAATCAGCAAAAGCAATCGAGGAGACCTACCAAGACCGATGAAACTGAGAGCCCATCGAGTAAAGTTGTGGCTTCTACTATAAAGCCTTCTAAGCAATTAACTCCTCAGTCTAAGAGCAACTTAGAGAGATTCTTGGAGGCCACAAGGCCTTCAGTTCCAGCGCAGTATTTCTCTAAGACAACTATGAGGGATTGGAGGACTTGTGACATTGAGTTTCAACCTTATTTCATTCTGAATGATCTGTGGGAGTCTTTCAAGGAGTGGAGTGCATATGGCGCTGGAGTTCCTTTAGTTCTTAATGGAGGTGATTCTGTTGTTCAATATTACGTTCCATATTTGTCTGGTATCCAAATATATGGTGAAGCTTCTGCACTGAGACCAGATTCTAACTCCAGGCTGGCTAGTGAGGACAGTGATCTTGACTCTTTTAGAGATACAAGCAGCGATGGAAGCATTGACTATGAGTTTGGAAAAATCTGTAACTTTTCTAGTGAACAGTGGGTTCATCACCATCTAGCTTGTGAAAACACACTGAAAATGAGAAATACGTCTTTAACTGATGAACATAGAACGATACAAGAAGGTTTTTCGAGTGATGATGCGGATGCAGGATATCATCGAAGTGGTTTGCTCTTTCAGTTTCTTGAGCATGATCTTCCTTATCAACGTGTACCATTGGCTGATAAAATATTTGAACTTGCTTTCCAATTTCCTGGTTTGAAAACGTTAAGAAGTTGTGATATCCTGTCAGCCAGCTGGGTCTCTGTAGCATGGTACCCTATTTACCGTATACCCACCGGTCCGACATTAAAAGATTTGGATGCTTGCTTCTTAACATATCATTCCCTTTCCACACCAGGTAATGGACATGGTCTGCCACCAGTAATGATATATCCAAAGGACATTGATGGTATCGCAAAGGTCTCCTTGCCTGTTTTTGGATTGGCTTCTTATAAGCTGAAAGGATCGATATGGGGGCAAAATGGCGTCAACGAGCATCAAACGGCAAATTCTCTCATGCAGGCAGCAGATAAGTGGCTGAGGAGCCTTCAGGTCGTTCAACCTGATTTTCAGTTCTTTGCATCACATGGGACATACTGGAGATGACAGGAGATGACTCAAGATATAATCTACTTCTCTGCTGCCCATTCGAACTATCAAAATAACAAATTTGTGCCCTTATCAACTATTTGACCTGCCTTCAATACTGGTAAGGATATATTTTGATTTTTGGTGGTTTCTTCTTTCTGGAAATACATTTCGTGGAGGCAGTTAAGAAAAATGTTCGCAGCAGCTGGTTAGAACCGTGTGTAAAATGGGGGAGGAGAGTAATAAAACTGTGAAATGGGAGTAGTAGCAGAACAGGGCTGATGTGAAGTGGAATTTTGAAGGGCAAAAGCAATATGGAGATTGGAAACTGATGGCAATCAAGCTGAAGGTTGTCTATCATTCTACACTGACCTTGGAAACTTGTGAGAACTCATTCTCTATTTCTACACTCCCATAAAATTTAGAGTCATTGTTTGTCTTGTTTTGTGAACTTCAAGAAGTACAAATTTCCATGTATATTACATATGTTTTGATGTTGGGCATCTTTTTTAGATTCACACAAGTATAGATGAGAAATATTAGATGGAATTCTATATTGTAAGAAGAAATATTATATTTGTAGCATTTTGTAGTTTCGAATATGCATCATTCTGGATTGAACAGGAATCATATTCCCTCCCCATCCAACATTGGTAGAATTTGTACCATTTAAAATATTCAGAAGGGAATGTGGGAATGGAGAATCAGTGTTCTTTTCCCCCTTGATTGATGTGAAACCGTCTAGGAATAGTATTCTGTTTGTG ATGTTGGGAACTGCGTTGCAGTTTGGGGGAATCAAAGGTGAGGATCGGTTTTATATTCCGGTAAGGGCACGAAAGAATTATAATCAGCAAAAGCAATCGAGGAGACCTACCAAGACCGATGAAACTGAGAGCCCATCGAGTAAAGTTGTGGCTTCTACTATAAAGCCTTCTAAGCAATTAACTCCTCAGTCTAAGAGCAACTTAGAGAGATTCTTGGAGGCCACAAGGCCTTCAGTTCCAGCGCAGTATTTCTCTAAGACAACTATGAGGGATTGGAGGACTTGTGACATTGAGTTTCAACCTTATTTCATTCTGAATGATCTGTGGGAGTCTTTCAAGGAGTGGAGTGCATATGGCGCTGGAGTTCCTTTAGTTCTTAATGGAGGTGATTCTGTTGTTCAATATTACGTTCCATATTTGTCTGGTATCCAAATATATGGTGAAGCTTCTGCACTGAGACCAGATTCTAACTCCAGGCTGGCTAGTGAGGACAGTGATCTTGACTCTTTTAGAGATACAAGCAGCGATGGAAGCATTGACTATGAGTTTGGAAAAATCTGTAACTTTTCTAGTGAACAGTGGGTTCATCACCATCTAGCTTGTGAAAACACACTGAAAATGAGAAATACGTCTTTAACTGATGAACATAGAACGATACAAGAAGGTTTTTCGAGTGATGATGCGGATGCAGGATATCATCGAAGTGGTTTGCTCTTTCAGTTTCTTGAGCATGATCTTCCTTATCAACGTGTACCATTGGCTGATAAAATATTTGAACTTGCTTTCCAATTTCCTGGTTTGAAAACGTTAAGAAGTTGTGATATCCTGTCAGCCAGCTGGGTCTCTGTAGCATGGTACCCTATTTACCGTATACCCACCGGTCCGACATTAAAAGATTTGGATGCTTGCTTCTTAACATATCATTCCCTTTCCACACCAGGTAATGGACATGGTCTGCCACCAGTAATGATATATCCAAAGGACATTGATGGTATCGCAAAGGTCTCCTTGCCTGTTTTTGGATTGGCTTCTTATAAGCTGAAAGGATCGATATGGGGGCAAAATGGCGTCAACGAGCATCAAACGGCAAATTCTCTCATGCAGGCAGCAGATAAGTGGCTGAGGAGCCTTCAGGTCGTTCAACCTGATTTTCAGTTCTTTGCATCACATGGGACATACTGGAGATGA MLGTALQFGGIKGEDRFYIPVRARKNYNQQKQSRRPTKTDETESPSSKVVASTIKPSKQLTPQSKSNLERFLEATRPSVPAQYFSKTTMRDWRTCDIEFQPYFILNDLWESFKEWSAYGAGVPLVLNGGDSVVQYYVPYLSGIQIYGEASALRPDSNSRLASEDSDLDSFRDTSSDGSIDYEFGKICNFSSEQWVHHHLACENTLKMRNTSLTDEHRTIQEGFSSDDADAGYHRSGLLFQFLEHDLPYQRVPLADKIFELAFQFPGLKTLRSCDILSASWVSVAWYPIYRIPTGPTLKDLDACFLTYHSLSTPGNGHGLPPVMIYPKDIDGIAKVSLPVFGLASYKLKGSIWGQNGVNEHQTANSLMQAADKWLRSLQVVQPDFQFFASHGTYWR Homology
BLAST of Lsi06G013160 vs. ExPASy TrEMBL
Match: A0A5A7USF1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00790 PE=4 SV=1) HSP 1 Score: 711.4 bits (1835), Expect = 2.0e-201 Identity = 348/397 (87.66%), Postives = 362/397 (91.18%), Query Frame = 0
BLAST of Lsi06G013160 vs. ExPASy TrEMBL
Match: A0A1S3BX10 (uncharacterized protein LOC103494138 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103494138 PE=4 SV=1) HSP 1 Score: 711.4 bits (1835), Expect = 2.0e-201 Identity = 348/397 (87.66%), Postives = 362/397 (91.18%), Query Frame = 0
BLAST of Lsi06G013160 vs. ExPASy TrEMBL
Match: A0A0A0LS49 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024240 PE=4 SV=1) HSP 1 Score: 703.7 bits (1815), Expect = 4.2e-199 Identity = 341/397 (85.89%), Postives = 361/397 (90.93%), Query Frame = 0
BLAST of Lsi06G013160 vs. ExPASy TrEMBL
Match: A0A6J1E577 (uncharacterized protein LOC111430050 OS=Cucurbita moschata OX=3662 GN=LOC111430050 PE=4 SV=1) HSP 1 Score: 702.2 bits (1811), Expect = 1.2e-198 Identity = 343/397 (86.40%), Postives = 360/397 (90.68%), Query Frame = 0
BLAST of Lsi06G013160 vs. ExPASy TrEMBL
Match: A0A6J1JE68 (uncharacterized protein LOC111484983 OS=Cucurbita maxima OX=3661 GN=LOC111484983 PE=4 SV=1) HSP 1 Score: 696.8 bits (1797), Expect = 5.2e-197 Identity = 342/397 (86.15%), Postives = 358/397 (90.18%), Query Frame = 0
BLAST of Lsi06G013160 vs. NCBI nr
Match: XP_038897708.1 (uncharacterized protein LOC120085653 [Benincasa hispida]) HSP 1 Score: 771.2 bits (1990), Expect = 4.4e-219 Identity = 372/395 (94.18%), Postives = 381/395 (96.46%), Query Frame = 0
BLAST of Lsi06G013160 vs. NCBI nr
Match: XP_008453426.1 (PREDICTED: uncharacterized protein LOC103494138 isoform X1 [Cucumis melo] >KAA0058094.1 uncharacterized protein E6C27_scaffold274G004020 [Cucumis melo var. makuwa] >TYK28447.1 uncharacterized protein E5676_scaffold629G00790 [Cucumis melo var. makuwa]) HSP 1 Score: 711.4 bits (1835), Expect = 4.2e-201 Identity = 348/397 (87.66%), Postives = 362/397 (91.18%), Query Frame = 0
BLAST of Lsi06G013160 vs. NCBI nr
Match: XP_031736215.1 (uncharacterized protein LOC101215266 [Cucumis sativus] >KGN63839.1 hypothetical protein Csa_014275 [Cucumis sativus]) HSP 1 Score: 703.7 bits (1815), Expect = 8.7e-199 Identity = 341/397 (85.89%), Postives = 361/397 (90.93%), Query Frame = 0
BLAST of Lsi06G013160 vs. NCBI nr
Match: XP_023516127.1 (uncharacterized protein LOC111780081 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 702.2 bits (1811), Expect = 2.5e-198 Identity = 344/397 (86.65%), Postives = 360/397 (90.68%), Query Frame = 0
BLAST of Lsi06G013160 vs. NCBI nr
Match: XP_022921943.1 (uncharacterized protein LOC111430050 [Cucurbita moschata] >KAG7023306.1 hypothetical protein SDJN02_14331 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 702.2 bits (1811), Expect = 2.5e-198 Identity = 343/397 (86.40%), Postives = 360/397 (90.68%), Query Frame = 0
BLAST of Lsi06G013160 vs. TAIR 10
Match: AT2G01260.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 332.0 bits (850), Expect = 6.4e-91 Identity = 198/391 (50.64%), Postives = 238/391 (60.87%), Query Frame = 0
BLAST of Lsi06G013160 vs. TAIR 10
Match: AT1G15030.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 327.4 bits (838), Expect = 1.6e-89 Identity = 179/327 (54.74%), Postives = 217/327 (66.36%), Query Frame = 0
BLAST of Lsi06G013160 vs. TAIR 10
Match: AT4G16100.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 304.3 bits (778), Expect = 1.4e-82 Identity = 183/413 (44.31%), Postives = 243/413 (58.84%), Query Frame = 0
BLAST of Lsi06G013160 vs. TAIR 10
Match: AT5G49220.1 (Protein of unknown function (DUF789) ) HSP 1 Score: 268.1 bits (684), Expect = 1.1e-71 Identity = 171/436 (39.22%), Postives = 232/436 (53.21%), Query Frame = 0
BLAST of Lsi06G013160 vs. TAIR 10
Match: AT2G01260.2 (Protein of unknown function (DUF789) ) HSP 1 Score: 263.1 bits (671), Expect = 3.7e-70 Identity = 160/320 (50.00%), Postives = 194/320 (60.62%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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