Lsi06G012890 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G012890
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr06: 23441032 .. 23445542 (-)
RNA-Seq ExpressionLsi06G012890
SyntenyLsi06G012890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAAGTACGAATTAAAACAATAAAAAAAATGGTAGTAAATGAGAAATATAAGGTAATAGACCTTCTAAACCTATTTTTCAAAACTTGAGAACTAAAATGACTAATTTAAAACTTTGAAGACCAATTGCACCTGTTCTTGAAAACTCAAAGACTAAAAAGATATTTTTCCCTTAATTTTAATAAGAAATGAAGAAGAATTAAGAGGAAAGAAGCAAGTACACCCCACTTAACACTACTCTTTATACATATATTTTGTCCCGATAATCTCTAGTACACCCCCCAAAGTCACCCTCTTATGATGTAGCTCTATATATTTGGTCTCCATAATCTTTAGTACACACACCTCTTTAGACATATAAGATTAGGGGTTCTCTACCAGAAGTTAGAATTTAAGAGATTTTACAAAGCTTAGAAGGTATTCTTACCACGTCAATGTACAAATTACTAATCTTATTAGGGTTCTCTCTTAAGACATATACCAACTATTCTCATAGTTACCAAAGAGTTCTCATTAACACGATTAATATAGGAAAAAAAAAAAAAAAGAAAGAAAGGAAGGAAGATTGACGGGTGGAGGGTGATAGCATGGAGAGAAATGATTACCAATAAAAACAAATTAATTTAGTTGGCCAAATTAGCTAACTAATGAGTGCTACATAAGATTTTCGTTAGTCAACTAATGGCCATATTATTTTAAGGGCCATTTTGAACATTTTACTAAACTTCGTCGAAAAAAGTGTCTTTTAAAACTTCAATGACTAAATAGACACTAATGCTAAACTTCTTAGAGCAAAAGTATATTTTGTGCTACTTCTACAAAGTAAGTTAGAAAACTTAGTCAAAATTCAAAAACGGAAAAGTTTTTTTCCCCAAAAACTAATTCTGTTTATTCTTCAAATTTTGGCTATGAATATGATATCATATCACATCAAGACCACATCTGAAATAAAATTAAACAAAGAAAACATTATTAAACAAATGAGTAGTTTTTAAACTTTTTTCTTGTTTTTGTCATACTACTTTCTAAAAGTGGAAATAAAACAACCTTATTTTAAGGGAGAAAAGGACAATAATGAAAGGAAATGGTTGTCAAGGATAAAGTTTCCATTTTCCCCTCTTGAATAAATTATAAATAAAATAGTTAATTTTACCTTCTAAGTATCATACTGTAACTCCAATATGAGTATAGCTCAACTAACATTAAGTTTATACTATCGATCTCGAGGCCAGAAGTTCAATCCCCCCACCCAACATATTGCTAAAAAGAAAGTATCATACCATAACATTATACGTCTCTAAATGGTAAAATGTATATAATTCGTCCATAAACTTTCAATTATGTCTAGTCTAATATGTCTAAAATGTCTGATAAGTTTCTAAATTTTCAAATTTGTGTCTTAACAAGTTCCTCAACTTATTAAACACTTTTACAAACTTATTAAATACAAAATTGAAAGGTCATTGTCCTACTATTAGACACAGTTGACTTTCGTGTCAAATAGATCTTTTCTTTCTTTCTAATTGTTGTGATAAGAAATTTGTTAGATATAAAATTGAAAATTTTTTAAAATTTAGGAACATACTAAATACTACCTTCAAATTTAGGAACTTACTAAACACTAGCTTAAAAAAATTTATTAGATAACAAAATTGAATTTTTTTTTAAAAAAAATTCTAGAATTTAATCTTTATTCTACTATTGAACTTAGACTCCGTAAAGAAGTTAAGTAACATCCTCTAAACATTAATATCAATTCATATACGAAAATGAGGAGGAAAAAAAAAGGATATTTCTTCTAGTTTTAGCATCAACAAAGAAAATGCTAGGCATAATTATCAAATGCATGCATAAAATTCAGGCCAAAGAACAAAAAAGCTAAGGAATTGATGAAAAATAGTCACTACCTCGTCAGATTATATGGAAAAAGAGGTCGATGTGACTGTGATTGCAACCTTTATAATCTTTTTCCTTTTAGCAATAACGTTGTGACTTTGTGTATATTTTGACAAACCCAAGATATGGTGTCGATCCTCAGTGTGGAAGTGATAGAAAGCTTTACCTGATCACTTGTAACCACTAGGCCAAAGTAAGCTGTCTCTGAACTTTCATTGCGTTTCACCACCATTATGACAAATGGTTACCTACAAATCAGAAAAGCAAAAAGAAAAAATGAACAAATGTCATGAATGAATTTGCAGATTAACGTTCCCCAGTAGACAAATATTCTCCACAAGATTTCATACACACTAGCTTTTAACAGATCCTGTGTCCTCTCTTTCTCCTAAAACCACAGTGAACAATGTTCCTCAGAATTCCTTCCGGATATTGTATAAGTCTAATCTGACAGTTGATTAAGGCTTACAGTTACAACTGAAACGTGAATGTTACAGCATGAATTAGATAAGTCTATGTAGAATGCAAACAAACCTCAACAGGGAAGCTGTAAATGCATTCAGCCATGTTTTGGAGTCTAATCCTGTCAGATTTCATGGTTTTAAAACCACATGATTCTTTTACCAAGAGGGCAAGCATGATGGTCTAGGATAGAGTCACAGGATTTGATGTTTTGGATGAAGTCTGATCTCTGTGCAGAAAGACCAAGTTTTTACACCTATCTAAACATCAATTTAATTTACATTTGCGAATCTCTCTCCAAGTCTGTCTGGTCCAAGCGATCTCTAGGTTGGTTAGTTAAATCCTTGGGAAGAGATTGTGTCATCTCATTTTGATGTAATTTGTGAAGAATCCTCCAGGTAACGGCATCGGGTGCTAACCCATTCTTTCTCATCTCTGTGACCAGTTGATATGCTTCTCCTTTTAATCCCAACTTACAGGCAGTATTGATCACAATATTGTAGCAAAAGATACTTGGATAAACCCCTGAATCTGCTAGTTCATATAGGAAATGGCAAGCTTCGTTAAATTTGCTGGAGTGGCAAAGCCCTTTTAGAATAGCAGAATAAACAAAACTATCGTGAATCTTTGATGGCCAGACTATATCTTTCCAGAATCTCTTAACTTCTTCAATTTTATTGGAACCACACAACCCATCAATTATCACAGCGTAAGTAGTACTGTCAGCTTGGATGCCATTTCTAACCATTCTGTCAAAGGTATCCATTGCTTGGTTTGCCTGTTGAAGTTTAAACAAGCCTCGAATAGTGGCATTATATGTAATAACGCCTGGCACCATGCCTTTTTCTGGCATTACTTTATACAATATATCAAGAGATTCCCGGATCCTCCCAACATTCAGTAAGCCACATATAATAGTTGTGAAGGTCACACAATCAGGGGTACAGAATTTACCAATCATCATATCGTTTAATACCTTTAGAGCTTCTTCAATGCTTCCAACCTTGCAAAATCCCTTGATGACTGTATTGAGGGTAATGACATCAGGGTGACAATTAGTTTGAAGCATTACAACAAGCGTATTTAAGAGCTCAGTTGAGTTATTTGTTAGGCAGACAGCTCTCAAGTATATGTTGTAAATTCTAGTTCTATCCACGCCTTCCTTCTCTATCATTATTTGAAGAACTTCCTTAGCCTTTTGGATGTCTAGCTCTTTGCAAAGACATTCTAAAAGAACCTTATATGTATGTTCAGATGGTGAGTACCCAAATTCAACTCCTTCTACTAACAACTGATAAGCCCGCATACAACTTCCCTCCTTGCTAAGCCCATGGATAATAGAATTATATGATAACAAACCAGGATTAATCCCTTTCTTCCTCATTATATACACAATTCTTGAGGCCCCATGATGTCTTTTCGCTTTACAAAGTGAATCTATCATCTGCCCATAGGCAAATTCCTCGGGGACACTCTGCCCCTGCGGCATATCTTCTGCAATTAAAAACACCTCGTGGAAAGAACCAGCCAGACACAAAGAATCAACAAGATGGGCAAAAGCTGCACTCTTCACAGAGGAGTCAATTTCACCCTTCATCCTCTCCCAAAGCTTGCACATCAACGCCTTCCCAGTTTCAAAATCCCGCTTGTAAAGAAACCCATGAATTAACACACTGTATGTAAGTGAATTAGGCTCCACATCATTCTCAGGCATTTCGTCAAACAGTTTCTCGGCAGCAGATACATTACCAACACGGCTGTATCCATCAATCAAGGCAGTATAGGAAACAACATTTGGACAATGCCCTCTACTCTTCATATCAAATAAAACCCTATGAGCTACATTCGGTAGTGAAAACGAACAAAACTGATCAATCAAGCGATTATAATTCACTATAGAAGGAACAAACTCAGGCTTAGCGTCAAACAAACAAACAAGCAAGCGCAAGGTGCAATACGGAGATCGATAATCAAGCAAACGAGCAAGAAGAACATTACAAGTCCGTTCATCAGGCACACACCGAGAAGCAACAGAGAGCATAAAACGGCAGTGCGCTTCATGGAACCGGCGGGCATCAGAGAGACCATGGATTATGCTACCGAGATTGAGAGGGTGCAATTGGTAGCCGTGAAGGCGGAGAGCGTCGAGTAG

mRNA sequence

ATGTCAAATCCTGTGTCCTCTCTTTCTCCTAAAACCACAGTGAACAATGTTCCTCAGAATTCCTTCCGGATATTGTATAAGTCTAATCTGACAAGCTTCTTCAATGCTTCCAACCTTGCAAAATCCCTTGATGACTGTATTGAGGGTAATGACATCAGGGCAAATTCCTCGGGGACACTCTGCCCCTGCGGCATATCTTCTGCAATTAAAAACACCTCGTGGAAAGAACCAGCCAGACACAAAGAATCAACAAGATGGGCAAAAGCTGCACTCTTCACAGAGGAGTCAATTTCACCCTTCATCCTCTCCCAAAGCTTGCACATCAACGCCTTCCCAGTTTCAAAATCCCGCTTAAGGAACAAACTCAGGCTTAGCGTCAAACAAACAAACAAGCAAGCGCAAGGTGCAATACGGAGATCGATAATCAAGCAAACGAGCAAGAAGAACATTACAAGTCCGTTCATCAGGCACACACCGAGAAGCAACAGAGAGCATAAAACGGCAGTGCGCTTCATGGAACCGGCGGGCATCAGAGAGACCATGGATTATGCTACCGAGATTGAGAGGGTGCAATTGGTAGCCGTGAAGGCGGAGAGCGTCGAGTAG

Coding sequence (CDS)

ATGTCAAATCCTGTGTCCTCTCTTTCTCCTAAAACCACAGTGAACAATGTTCCTCAGAATTCCTTCCGGATATTGTATAAGTCTAATCTGACAAGCTTCTTCAATGCTTCCAACCTTGCAAAATCCCTTGATGACTGTATTGAGGGTAATGACATCAGGGCAAATTCCTCGGGGACACTCTGCCCCTGCGGCATATCTTCTGCAATTAAAAACACCTCGTGGAAAGAACCAGCCAGACACAAAGAATCAACAAGATGGGCAAAAGCTGCACTCTTCACAGAGGAGTCAATTTCACCCTTCATCCTCTCCCAAAGCTTGCACATCAACGCCTTCCCAGTTTCAAAATCCCGCTTAAGGAACAAACTCAGGCTTAGCGTCAAACAAACAAACAAGCAAGCGCAAGGTGCAATACGGAGATCGATAATCAAGCAAACGAGCAAGAAGAACATTACAAGTCCGTTCATCAGGCACACACCGAGAAGCAACAGAGAGCATAAAACGGCAGTGCGCTTCATGGAACCGGCGGGCATCAGAGAGACCATGGATTATGCTACCGAGATTGAGAGGGTGCAATTGGTAGCCGTGAAGGCGGAGAGCGTCGAGTAG

Protein sequence

MSNPVSSLSPKTTVNNVPQNSFRILYKSNLTSFFNASNLAKSLDDCIEGNDIRANSSGTLCPCGISSAIKNTSWKEPARHKESTRWAKAALFTEESISPFILSQSLHINAFPVSKSRLRNKLRLSVKQTNKQAQGAIRRSIIKQTSKKNITSPFIRHTPRSNREHKTAVRFMEPAGIRETMDYATEIERVQLVAVKAESVE
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G012890.1Lsi06G012890.1mRNA