Lsi06G011140 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G011140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	pathogenesis-related protein PR-1-like
Location	chr06: 21423123 .. 21423629 (-)
RNA-Seq Expression	Lsi06G011140
Synteny	Lsi06G011140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGCATATCTTCTCATCCCCATCGCCATTTTCATCCTCCTAAGCTCCGCCGGCCACGCCGCCGCAGCTCCCTTGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCCCTCCGATTGGCCCCTTTAGTTTGGGACAACAAATTGGCTCGCTACGCACAGTCCTACGCCAACAAGCGGCGGGGAGATTGCGCCCTCCGCCACTCCGGCGGACCTTACGGCGAAAACATCTTCTGGGGTAGCGGCAATGCGTGGACTCCAGCTCAAGCCGTCGGAGATTGGGTGTCGGAACGGAAATGGTACAGCTATTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCACTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGATGCGCCAGAGTCATATGCAACGACGGTAAAGGCGTGTTTATCACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTACTAA

mRNA sequence

ATGCATGCATATCTTCTCATCCCCATCGCCATTTTCATCCTCCTAAGCTCCGCCGGCCACGCCGCCGCAGCTCCCTTGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCCCTCCGATTGGCCCCTTTAGTTTGGGACAACAAATTGGCTCGCTACGCACAGTCCTACGCCAACAAGCGGCGGGGAGATTGCGCCCTCCGCCACTCCGGCGGACCTTACGGCGAAAACATCTTCTGGGGTAGCGGCAATGCGTGGACTCCAGCTCAAGCCGTCGGAGATTGGGTGTCGGAACGGAAATGGTACAGCTATTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCACTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGATGCGCCAGAGTCATATGCAACGACGGTAAAGGCGTGTTTATCACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTACTAA

Coding sequence (CDS)

ATGCATGCATATCTTCTCATCCCCATCGCCATTTTCATCCTCCTAAGCTCCGCCGGCCACGCCGCCGCAGCTCCCTTGAGGTCCGACATAGTTTTGCAAAAGCAATTCCTCGGCCCTCACAATGCCGCCAGATACGCCCTCCGATTGGCCCCTTTAGTTTGGGACAACAAATTGGCTCGCTACGCACAGTCCTACGCCAACAAGCGGCGGGGAGATTGCGCCCTCCGCCACTCCGGCGGACCTTACGGCGAAAACATCTTCTGGGGTAGCGGCAATGCGTGGACTCCAGCTCAAGCCGTCGGAGATTGGGTGTCGGAACGGAAATGGTACAGCTATTGGGCAAATTCTTGCGTGGAAGGTGAACTATGTGGTCACTATACTCAGATTGTGTGGCGGTCGACACGGCGGATTGGATGCGCCAGAGTCATATGCAACGACGGTAAAGGCGTGTTTATCACTTGCAACTATGACCCTCCTGGTAATTACATTGGGATGAGACCTTACTAA

Protein sequence

MHAYLLIPIAIFILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY

Homology

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BLAST of Lsi06G011140 vs. ExPASy Swiss-Prot
Match: Q40374 (Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-57
Identity = 93/136 (68.38%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 33  QKQFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGN 92
           + QFL P N AR A+ L PLVWD+KL  YAQ YAN+RR DCAL HS GPYGENIFWGSG 
Sbjct: 38  KNQFLIPQNIARAAVGLRPLVWDDKLTHYAQWYANQRRNDCALEHSNGPYGENIFWGSGV 97

Query: 93  AWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFI 152
            W PAQAV  WV E+++Y+YW NSCV+GE+CGHYTQ+VW ST ++GCA V+C+D KG F+
Sbjct: 98  GWNPAQAVSAWVDEKQFYNYWHNSCVDGEMCGHYTQVVWGSTTKVGCASVVCSDDKGTFM 157

Query: 153 TCNYDPPGNYIGMRPY 169
           TCNYDPPGNY G RPY
Sbjct: 158 TCNYDPPGNYYGERPY 173

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BLAST of Lsi06G011140 vs. ExPASy Swiss-Prot
Match: P35792 (Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-48
Identity = 85/157 (54.14%), Postives = 112/157 (71.34%), Query Frame = 0


Query: 13  ILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRRGD 72
           ILL+ A  AA   L       + ++ PHNAAR A+ +  + W  KL  +AQ+YAN+R  D
Sbjct: 8   ILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRIND 67

Query: 73  CALRHSGGPYGENIFWGSGNA-WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVW 132
           C L+HSGGPYGENIFWGS  A W  A AV  WV+E+K Y+Y +N+C  G++CGHYTQ+VW
Sbjct: 68  CKLQHSGGPYGENIFWGSAGADWKAADAVNSWVNEKKDYNYGSNTCAAGKVCGHYTQVVW 127

Query: 133 RSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           R++  IGCARV+CN+ +GVFITCNY+P GN +G +PY
Sbjct: 128 RASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

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BLAST of Lsi06G011140 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-48
Identity = 85/159 (53.46%), Postives = 112/159 (70.44%), Query Frame = 0


Query: 11  IFILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRR 70
           + ILL+ A  AA   L       + ++ PHNAAR A+ +  + W  KL  +AQ+YAN+R 
Sbjct: 6   LVILLALAMSAAMVNLSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRI 65

Query: 71  GDCALRHSGGPYGENIFWGSGNA-WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQI 130
            DC L+HSGGPYGENIFWGS  A W  + AV  WVSE+K Y Y +N+C  G++CGHYTQ+
Sbjct: 66  NDCKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQV 125

Query: 131 VWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           VWR++  IGCARV+CN+ +GVFITCNY+P GN +G +PY
Sbjct: 126 VWRASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Lsi06G011140 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.6e-48
Identity = 86/157 (54.78%), Postives = 111/157 (70.70%), Query Frame = 0


Query: 13  ILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRRGD 72
           ILL+ A  AA   L       + ++ PHNAAR A+ +  + W  KL  +AQ+YAN+R  D
Sbjct: 8   ILLALAMAAAMVNLSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRIND 67

Query: 73  CALRHSGGPYGENIFWGSGNA-WTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVW 132
           C L+HSGGPYGENIFWGS  A W  + AV  WVSE+K Y Y +N+C  G++CGHYTQ+VW
Sbjct: 68  CKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVW 127

Query: 133 RSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           R++  IGCARV+CN+ +GVFITCNY+P GN IG +PY
Sbjct: 128 RASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

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BLAST of Lsi06G011140 vs. ExPASy Swiss-Prot
Match: Q00008 (Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 6.9e-47
Identity = 86/162 (53.09%), Postives = 111/162 (68.52%), Query Frame = 0


Query: 9   IAIFIL-LSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQSYAN 68
           +A+ +L L  A   A  P  S+   Q  +L P N+AR A+ + P+ W  KL ++A+ YA 
Sbjct: 7   LAVLLLWLVMAAATAVHPSYSENSPQ-DYLTPQNSARAAVGVGPVTWSTKLQQFAEKYAA 66

Query: 69  KRRGDCALRHSGGPYGENIFWGS-GNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHY 128
           +R GDC L+HSGGPYGENIFWGS G  W    AV  WV E++WY+Y  NSC  G++CGHY
Sbjct: 67  QRAGDCRLQHSGGPYGENIFWGSAGFDWKAVDAVRSWVDEKQWYNYATNSCAAGKVCGHY 126

Query: 129 TQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           TQ+VWR+T  IGCARV+C D +GVFI CNY+P GN  GM+PY
Sbjct: 127 TQVVWRATTSIGCARVVCRDNRGVFIICNYEPRGNIAGMKPY 167

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BLAST of Lsi06G011140 vs. ExPASy TrEMBL
Match: A0A6J1JD89 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111485737 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 7.5e-89
Identity = 157/169 (92.90%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MHAYLLIPIAIFI-LLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAI + LLSS+G AAAAP+RSD VLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGNAW PAQAV DWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           GELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Lsi06G011140 vs. ExPASy TrEMBL
Match: A0A6J1E2D3 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111429942 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 1.9e-87
Identity = 156/169 (92.31%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MHAYLLIPIAIFI-LLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAI + LLSS+G AAAAP+RSD VLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGNAW PAQAV DWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           GEL GHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Lsi06G011140 vs. ExPASy TrEMBL
Match: A0A6J1ES44 (pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC111436010 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 1.2e-86
Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MHAYLLIPIAIFILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLAR 60
           M AYLLIPIAIFILLSS GHA AA ++SD  LQKQFLGPHNAARYALRLAPLVWD KLAR
Sbjct: 1   MQAYLLIPIAIFILLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLAR 60

Query: 61  YAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEG 120
           YAQSYANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAV DWVSERKWYSYW+NSCVEG
Sbjct: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVEG 120

Query: 121 ELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           ELCGHYTQIVWRSTRRIGCARV C  GKGVFITCNYDPPGNYIG RPY
Sbjct: 121 ELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Lsi06G011140 vs. ExPASy TrEMBL
Match: A0A6J1KI73 (pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC111496008 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MHAYLLIPIAIFILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLAR 60
           M AYLLIPIAIFILLSS GHA AA ++SD  LQKQFLGPHNAARYALRLAPLVWD KLAR
Sbjct: 1   MQAYLLIPIAIFILLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLAR 60

Query: 61  YAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEG 120
           YAQSYANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAV DWVSERKWYSYW+NSCVEG
Sbjct: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVEG 120

Query: 121 ELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           ELCGHYTQIVWRSTRRIGCARV C  GKGVFITCNYDPPGNYIG RPY
Sbjct: 121 ELCGHYTQIVWRSTRRIGCARVSCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Lsi06G011140 vs. ExPASy TrEMBL
Match: A0A0A0LWR4 (SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G420610 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.5e-84
Identity = 150/170 (88.24%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 1   MHAY-LLIPIAIFILLSSAGHAAAAP-LRSDIVLQKQFLGPHNAARYALRLAPLVWDNKL 60
           MHAY L+IPI I +LL+S  +AAAAP +RSD +LQKQFL PHNAARYALRL+PLVWD KL
Sbjct: 1   MHAYFLIIPIPILLLLTSTPYAAAAPSIRSDRILQKQFLAPHNAARYALRLSPLVWDPKL 60

Query: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCV 120
           ARYAQSYANKRRGDCALRHSGGPYGENIFWGSG  WTPAQAV DWVSERKWYSYWANSCV
Sbjct: 61  ARYAQSYANKRRGDCALRHSGGPYGENIFWGSGKDWTPAQAVADWVSERKWYSYWANSCV 120

Query: 121 EGELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           EGELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIGMRPY
Sbjct: 121 EGELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGMRPY 170

[Close]

BLAST of Lsi06G011140 vs. NCBI nr
Match: XP_022988522.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima])

HSP 1 Score: 336.3 bits (861), Expect = 1.6e-88
Identity = 157/169 (92.90%), Postives = 160/169 (94.67%), Query Frame = 0


Query: 1   MHAYLLIPIAIFI-LLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAI + LLSS+G AAAAP+RSD VLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGNAW PAQAV DWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           GELCGHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 GELCGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Lsi06G011140 vs. NCBI nr
Match: XP_022921796.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata])

HSP 1 Score: 331.6 bits (849), Expect = 3.8e-87
Identity = 156/169 (92.31%), Postives = 159/169 (94.08%), Query Frame = 0


Query: 1   MHAYLLIPIAIFI-LLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAI + LLSS+G AAAAP+RSD VLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSSGPAAAAPVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGNAW PAQAV DWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNAWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           GEL GHYTQIVWRSTRRIGCARV CNDGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 GELRGHYTQIVWRSTRRIGCARVTCNDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Lsi06G011140 vs. NCBI nr
Match: XP_022929438.1 (pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 2.5e-86
Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MHAYLLIPIAIFILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLAR 60
           M AYLLIPIAIFILLSS GHA AA ++SD  LQKQFLGPHNAARYALRLAPLVWD KLAR
Sbjct: 1   MQAYLLIPIAIFILLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLAR 60

Query: 61  YAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEG 120
           YAQSYANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAV DWVSERKWYSYW+NSCVEG
Sbjct: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVEG 120

Query: 121 ELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           ELCGHYTQIVWRSTRRIGCARV C  GKGVFITCNYDPPGNYIG RPY
Sbjct: 121 ELCGHYTQIVWRSTRRIGCARVTCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Lsi06G011140 vs. NCBI nr
Match: XP_023001992.1 (pathogenesis-related protein PR-1-like [Cucurbita maxima])

HSP 1 Score: 328.6 bits (841), Expect = 3.2e-86
Identity = 151/168 (89.88%), Postives = 155/168 (92.26%), Query Frame = 0


Query: 1   MHAYLLIPIAIFILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLAR 60
           M AYLLIPIAIFILLSS GHA AA ++SD  LQKQFLGPHNAARYALRLAPLVWD KLAR
Sbjct: 1   MQAYLLIPIAIFILLSSTGHATAALVKSDKALQKQFLGPHNAARYALRLAPLVWDTKLAR 60

Query: 61  YAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEG 120
           YAQSYANKRRGDCALRHS GPYGENIFWGSGNAW+PAQAV DWVSERKWYSYW+NSCVEG
Sbjct: 61  YAQSYANKRRGDCALRHSNGPYGENIFWGSGNAWSPAQAVADWVSERKWYSYWSNSCVEG 120

Query: 121 ELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           ELCGHYTQIVWRSTRRIGCARV C  GKGVFITCNYDPPGNYIG RPY
Sbjct: 121 ELCGHYTQIVWRSTRRIGCARVSCKQGKGVFITCNYDPPGNYIGERPY 168

[Close]

BLAST of Lsi06G011140 vs. NCBI nr
Match: XP_023516778.1 (pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.2 bits (835), Expect = 1.6e-85
Identity = 153/169 (90.53%), Postives = 156/169 (92.31%), Query Frame = 0


Query: 1   MHAYLLIPIAIFI-LLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLA 60
           MHAYLLIPIAI + LLSS G AAAA +RSD VLQKQFLGPHNAARYALRLAPLVWDNKLA
Sbjct: 1   MHAYLLIPIAIILTLLSSIGLAAAASVRSDRVLQKQFLGPHNAARYALRLAPLVWDNKLA 60

Query: 61  RYAQSYANKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVE 120
           RYAQ YANKRRGDCALRHSGGPYGENIFWGSGN W PAQAV DWVSERKWYSYWANSCVE
Sbjct: 61  RYAQWYANKRRGDCALRHSGGPYGENIFWGSGNTWNPAQAVSDWVSERKWYSYWANSCVE 120

Query: 121 GELCGHYTQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           GELCGHYTQIVWR+TRRIGCARV C DGKGVFITCNYDPPGNYIG RPY
Sbjct: 121 GELCGHYTQIVWRTTRRIGCARVTCYDGKGVFITCNYDPPGNYIGERPY 169

[Close]

BLAST of Lsi06G011140 vs. TAIR 10
Match: AT4G30320.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 216.1 bits (549), Expect = 2.2e-56
Identity = 98/162 (60.49%), Postives = 120/162 (74.07%), Query Frame = 0


Query: 7   IPIAIFILLSSAGHAAAAPLRSDIVLQKQFLGPHNAARYALRLAPLVWDNKLARYAQSYA 66
           + I   +LL +  H A          Q+QF+GP NAAR  LRL PL WD KLARYAQ +A
Sbjct: 9   VAITAMMLLVTCCHCA--------TYQEQFMGPQNAARAHLRLKPLKWDAKLARYAQWWA 68

Query: 67  NKRRGDCALRHSGGPYGENIFWGSGNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHY 126
           N+RRGDCAL HS GPYGEN+FWGSGN W P+QA   W+SE + Y+Y +NSC   E+CGHY
Sbjct: 69  NQRRGDCALTHSNGPYGENLFWGSGNRWGPSQAAYGWLSEARSYNYRSNSC-NSEMCGHY 128

Query: 127 TQIVWRSTRRIGCARVICNDGKGVFITCNYDPPGNYIGMRPY 169
           TQIVW++T++IGCA VICN G GVF+TCNYDPPGN++G +PY
Sbjct: 129 TQIVWKNTQKIGCAHVICNGGGGVFLTCNYDPPGNFLGRKPY 161

[Close]

BLAST of Lsi06G011140 vs. TAIR 10
Match: AT5G57625.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 200.3 bits (508), Expect = 1.2e-51
Identity = 83/137 (60.58%), Postives = 104/137 (75.91%), Query Frame = 0


Query: 32  LQKQFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSG 91
           + + FL PHNA R  L L PL+WD KLA YA  +AN+RR DC+L HS GPYGEN+FWGSG
Sbjct: 71  IARLFLDPHNALRSGLGLPPLIWDGKLASYATWWANQRRYDCSLTHSTGPYGENLFWGSG 130

Query: 92  NAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVF 151
           ++W P  AV  W+ E + Y++  NSC    +CGHYTQ+VWR T+R+GCARV+C +G GVF
Sbjct: 131 SSWAPGFAVQSWIVEGRSYNHNTNSCDGSGMCGHYTQMVWRDTKRLGCARVVCENGAGVF 190

Query: 152 ITCNYDPPGNYIGMRPY 169
           ITCNYDPPGNY+G +PY
Sbjct: 191 ITCNYDPPGNYVGEKPY 207

[Close]

BLAST of Lsi06G011140 vs. TAIR 10
Match: AT4G25790.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 196.8 bits (499), Expect = 1.4e-50
Identity = 84/136 (61.76%), Postives = 102/136 (75.00%), Query Frame = 0


Query: 33  QKQFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSGN 92
           ++QFL PHN  R  L L PLVWD K+A YA  +AN+RR DC+L HS GPYGEN+FWGSG+
Sbjct: 75  EQQFLDPHNTVRGGLGLPPLVWDVKIASYATWWANQRRYDCSLTHSTGPYGENLFWGSGS 134

Query: 93  AWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVFI 152
            +T   AV  W  E K Y++  N+C    +CGHYTQIVWR TRR+GCARV+C +G GVFI
Sbjct: 135 DFTSTFAVESWTVEAKSYNHMTNTCEGDGMCGHYTQIVWRETRRLGCARVVCENGAGVFI 194

Query: 153 TCNYDPPGNYIGMRPY 169
           TCNYDPPGNY+G +PY
Sbjct: 195 TCNYDPPGNYVGEKPY 210

[Close]

BLAST of Lsi06G011140 vs. TAIR 10
Match: AT4G25780.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 191.0 bits (484), Expect = 7.5e-49
Identity = 84/138 (60.87%), Postives = 106/138 (76.81%), Query Frame = 0


Query: 35  QFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRRGDCALRH--SGGPY--GENIFWGS 94
           QFL  HN  R A    PL+WD +L  YAQ +AN+RRGDCALRH  S G +  GENI+WG 
Sbjct: 54  QFLFRHNLVRAARFEPPLIWDRRLQNYAQGWANQRRGDCALRHSVSNGEFNLGENIYWGY 113

Query: 95  GNAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGV 154
           G  W+PA AV  W SE+++Y Y +N+C  G++CGHYTQIVW+STRR+GCARV+C++G G+
Sbjct: 114 GANWSPADAVVAWASEKRFYHYGSNTCDAGQMCGHYTQIVWKSTRRVGCARVVCDNG-GI 173

Query: 155 FITCNYDPPGNYIGMRPY 169
           F+TCNYDPPGNYIG +PY
Sbjct: 174 FMTCNYDPPGNYIGQKPY 190

[Close]

BLAST of Lsi06G011140 vs. TAIR 10
Match: AT4G31470.1 (CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein )

HSP 1 Score: 173.3 bits (438), Expect = 1.6e-43
Identity = 77/137 (56.20%), Postives = 88/137 (64.23%), Query Frame = 0


Query: 32  LQKQFLGPHNAARYALRLAPLVWDNKLARYAQSYANKRRGDCALRHSGGPYGENIFWGSG 91
           +Q+QFL PHN  R  LRL PL W N LA YA  +A  RRGDC L HSGGPYGEN+FWGSG
Sbjct: 50  IQQQFLRPHNILRAKLRLPPLKWSNSLALYASRWARTRRGDCKLIHSGGPYGENLFWGSG 109

Query: 92  NAWTPAQAVGDWVSERKWYSYWANSCVEGELCGHYTQIVWRSTRRIGCARVICNDGKGVF 151
             WTP  AV  W SE K+Y    + C     C HYTQ+VW+ + RIGCA   C  G   F
Sbjct: 110 KGWTPRDAVAAWASEMKYYDRRTSHCKANGDCLHYTQLVWKKSSRIGCAISFCKTG-DTF 169

Query: 152 ITCNYDPPGNYIGMRPY 169
           I CNYDPPGN +G  P+
Sbjct: 170 IICNYDPPGNIVGQPPF 185

The following BLAST results are available for this feature:

BLAST of Lsi06G011140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40374	1.5e-57	68.38	Pathogenesis-related protein PR-1 OS=Medicago truncatula OX=3880 GN=PR-1 PE=2 SV...	[more]
P35792	3.6e-48	54.14	Pathogenesis-related protein PRB1-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
P35793	3.6e-48	53.46	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q05968	3.6e-48	54.78	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q00008	6.9e-47	53.09	Pathogenesis-related protein PRMS OS=Zea mays OX=4577 GN=PRMS PE=2 SV=1	[more]

BLAST of Lsi06G011140 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JD89	7.5e-89	92.90	pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114857...	[more]
A0A6J1E2D3	1.9e-87	92.31	pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11142...	[more]
A0A6J1ES44	1.2e-86	89.88	pathogenesis-related protein PR-1-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1KI73	1.6e-86	89.88	pathogenesis-related protein PR-1-like OS=Cucurbita maxima OX=3661 GN=LOC1114960...	[more]
A0A0A0LWR4	1.5e-84	88.24	SCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G420610 PE=4 SV...	[more]

BLAST of Lsi06G011140 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988522.1	1.6e-88	92.90	pathogenesis-related protein PR-1-like [Cucurbita maxima]	[more]
XP_022921796.1	3.8e-87	92.31	pathogenesis-related protein PR-1-like [Cucurbita moschata]	[more]
XP_022929438.1	2.5e-86	89.88	pathogenesis-related protein PR-1-like [Cucurbita moschata] >XP_023529539.1 path...	[more]
XP_023001992.1	3.2e-86	89.88	pathogenesis-related protein PR-1-like [Cucurbita maxima]	[more]
XP_023516778.1	1.6e-85	90.53	pathogenesis-related protein PR-1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi06G011140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30320.1	2.2e-56	60.49	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT5G57625.1	1.2e-51	60.58	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G25790.1	1.4e-50	61.76	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G25780.1	7.5e-49	60.87	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]
AT4G31470.1	1.6e-43	56.20	CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 pro...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 123..139 score: 61.98 coord: 151..164 score: 55.56 coord: 99..112 score: 37.14 coord: 52..70 score: 42.49
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 16..168
IPR002413	Venom allergen 5-like	PRINTS	PR00838	V5ALLERGEN	coord: 122..141 score: 55.31 coord: 52..70 score: 46.38
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 31..164 e-value: 9.4E-58 score: 207.9
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 39..156 e-value: 1.2E-23 score: 84.3
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 31..168 e-value: 4.1E-43 score: 149.0
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 32..168
None	No IPR available	PANTHER	PTHR10334:SF466	OS02G0786500 PROTEIN	coord: 16..168
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 33..168 e-value: 4.94541E-88 score: 251.784
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01010	CRISP_2	coord: 151..162
IPR018244	Allergen V5/Tpx-1-related, conserved site	PROSITE	PS01009	CRISP_1	coord: 124..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G011140.1	Lsi06G011140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005615	extracellular space
cellular_component	GO:0005576	extracellular region