Lsi06G010700 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAATATTCATTGGTCCAGCATGCGTGGAAGTGCATCACTCTCTATCGTCAACACAGGCCGTAAAACCGAAGACCCACTTCCTTCTTCCTCTCGCCGTCGTCGTCGCCGTCGTCGCCCTTCCGCCCCCAGCTGAAAATACCTAACCCTTCCACTTTGCTCCCTTCCTTTTCACCATTGTACGTTTGTTTCAGGACGCAGAAATGACGAAATTGATGTGGTTGATCCTTTTAGCTGGTAATCTTTGCCACTTTGCGTTAGCTGATCAGATCTTCCCAGCTCAATTAGGTGAAATTCTTCTCCCTCATTTTCTTTTTCTTGAACTTTTCACATGAAAACTTGAGAAATAGACGTGATTGATGAATTTATATTGTGGGTAGTTCCTTGCGTAATATATTTCATCGCATATTGGAATTAGCGAACTCCAGAGGGTGGTATTTCATAGGTTGTTTAACACGACTTGAAACTTGAAACATTTATTACTTTTGCTTATTATGACAGTAACTTGTTAGTATGAAATTTTATTCTCTCTTCTTTCTGATTGTTGATTAGCAGGTGGTACATTTAGTCGCAACTCTCGTGGGCCAAAATACAATATAGAATTCCATCCACAAGACTCGCCTTACAATCCTGTAAGCTTTTTAATATACTTAGTTGTTAATTCTTGATATTAATAGGACCTTGTTTGCTTATATGATGTAATAATATGGGTAGATTTTGGGTCTTAGGCATCCCTCCCGCTTTCTTGTTAACTCGGAGTGTACTGTAACTTTGTTCCAAATATCCTCAATTAAGTAACCCAGTATATAGTACTGTACATCTTTACGAAGTCAAAGATTTTAGATTCTGGTATCTTCATATATCAGCATCTCGATAAGTAGTACTGCATCTTCAGAATTGTAACCTTCCCATGACATATAAGCTACTAATACGTTTTTTCTCAAAGCAAGTTTGCCACCAACTATAGCAGCACCTAAAATTTGCCATTTTTTAATGTATTTACCCTGGTTCACTTGGGACTTTTGCTGCATACAAGGTTTTTTTTTGTTAGAAAGTTGATACATAACTAATGAAACTCTTCAAGTATACCCATTACCCAAAAAAATGATCTTGTCAATATTGGTATAAATGATCTTTCCCCCGTGTTTGGGTATTCGGGTATAGCGGCAACCCCTGAATCCTGAGCCACTTGGCGTTCCAACCTAGTTCCAACAATGCACTTTTTGGACCAAGAAAGCGAGACTGCTTGACGTTGCATATTAGAATTCATTAAAACATGATTTGCATCCTTATGTTCGATAAAAGGAATGAGGGAAGCTCCAATAGAAAAATATTGGAAGGGAAAAAGATTTCGAAGATGAACTTGTTCCCATTCAATAGTCCAGAATTATTGACGGTATCGAGTTGGAACAATCCGTTCTGCATTTCTGCACACGTTCATTAATTAATCTCTAGTTATCTTATTTTGCTGTTTCTTTGTTTGAGTTTATCATCGTATGTTTTCTCTGTTGGCCTAATTTTTTAGTTTTATACAATAGATTGTTTCCCACTCTGTGAAATATATTCATTAGTTGCTTTCTTTCTCTGAGACAGAGGATTTGAGGAAGGGCATTGGAGATTTTGGCATTGGAGATTGATAGTTGATTGTTTTGTTTGGCACGACTAAATACAATAAATGAATGACGAGAAATTTTCTGTGTTACATTGATCCATGGCACCAAATTTTGAAGCAAATTAAAATTGTAGTTTCATCCTTTTGGTATTAAGCAGTAGGAATATTTGGTATGCAAATGATTTCTTGAACTCTAGGACCCTCTTAGATGGCCTCTACATGAGACTGGTCGTTAAGATGCACTATGGAAGAGGAGTTGGGAAGATGGCTTCTATATGCACTGTATCGCTTAGGCTTGATAATTAAGTCATTGTATGTACTAAATTCTGATGCAAATGTAAGTGCAAATTTAAAACACCTTCTCCGTGCATGAAGTTTTATCGGTAATGTTTTCCATCAACTTGAAGAGTTGAGATATTGAGCCTGTAATCTGTACCCGTACCCAGGTGTGTGGGAAAGTCACATTTCCATTTACAATCCCATTTGCCTTACAAGTTACCGTATTCTTTTCCTTATTGTAGACTTCCTACAGAATGTTTGTTCCCTAAGCTGTATGATATCTGTCTTCAGAATTCAAGAATATGTAGGTATGTCGTATGCCATCTGAACTTACTATGTTTTTGTGATTTTGCAGGACGATGATCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGCGGAAAGCCAACTGTTCAAGTGAACATGAGTAGCATGATTGTGGAATCTGAGAAGCGAGTCAAATTGAAGACTCCAGATGAGCTGCTTGAGGCATTAAAAGAGCAATGCTTTGTCCGGGTTAGGATCTATCGCTGAATATTGTCTGATGACTATATTATCTACATTTTAGAATCATATCTCAAAAGAAAAGTAAAGCTGTAAGCTGTGTTTTTTAATGTGTGCATTGAGAAATTGGCATCCCAATAAAAAGTTGAGGCCCATTCGATAACCATTTTATTTTTAATTTTTGGTTTTTGAAAATTAAGCTTCTAAAAACTACTTCCACCCATTACTATTAGTAGTTTTGAAAATTAAAAAATGTAGTTTTTAAACCCCTCTTTTTTTTTTTTTGGAATTCGAATTTGACTAAGAATCCAAATTCTTCCTTAAGAAAGATGACAACCATGCTATAGAAATTGTGAGCAAACAAGCTTAATTTTCTCTATGGTGGCCACCTACCTAGGATTTAATATCCTTCTGGTCTCTTTGACACCCAAATATTGTAGGGTCAAGCGGGTTGTCTCGAGAGATTAGTTGAGGTGCACATAATTTCAAAAACAAAAAACTAGATGGTTATCAAATAAGGCTTAAAGAAAGGTTAATTTTATTTCAAACGATGCCTAAAGAAATTAAGACATTTTCTTCTGTAATTTTTAAATAATACATATGTATTAAAAGTAAACAATGTGTTTAAAAAATGCAAGTGAAGTGTGTGCTTTGGGGTTGCCTTGCCTCATGTGAGACAAGGTGCCTTTCTTGCGCTCAACACCAATAAAGCTATTAAATACTAAGGTCTTTTGTTGTAAAATATATGCGTTTTTAAGTAAAACATGTGATGATTATGTCCTGAACAATTGACATGTTGACCTTGCATCATCTACTTCATTTTGCAGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTAAAACAATTTCATTTGGAGGATGAAAAGGTAGTCTCGTATAGTGCTTTATAATCCATTCTATATCTGATTCTCTAATCTTAGCTTATGAATAAGGAAGGCAACTGTCATTGTTTATTGGTTAATTAAAAACGTAAAATCATGCTGTGTTAAGTAGCAAAGACTTTTTTGACGTTTCTGTGTTTTGTCTTACAGGTAGTTCAGGAATTTGTATTGGGCGTCTATGATGCAGAGGCAACTGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCAAAAGATGCATCCCAAAGGTGTGCTTTAATTTTCATTAGTTACGAGAAAAGATATTATGAACAGGCTTTAAGTAATAGGAAAAGGCAATCTTCAAGCAGTAAAGCTTGTAATTTTCCTAGTTCTATCACTTCTCAGAAGTAGTAAGTTGGAGGCATACATGAAAAAGCAAAAACTTGTATGAGTTTTCATCCGGCGTTCTACTATTAATTTGTCTGTGTTTCTTCCAGTAGTCAATTCTTACATGTGCCAAATATGACACTCAAGACATGAAACAGAAAGCTAGTATGAATTTAGTGTTTGAAAGGTTTGATTGATCATATTAGTAGAACTCAAGGATACAGTTGTACAACTTATAGAAGAGATCCTGTTTAAATAAGATCGTAATGATTGATCATACAAGTGTGTTGAACAGTGCAAGAGTAAGATTAGTGCTTTGTTGAGTTATGTCATACACAAGAATTGTACGATAGATATAATAAGATCTATTATTTGTTAATAGACAACTAATCCCAATTTCTCAAAATAATGACCGATCTACATGACTCTCTCAGGTATCATGCTCATCATTACACAAATGGAACCATGTGTGATCTCACAAATCAACCGCGAGAAACTGAGGTACAAATAATTAATGATTTACTTTGTCACCCTTTTTTCTTTGAAAAATACTTAGGTGCATCCCGTGCAGCATCTATCTTTGTGCATTATCAACAAATTGTCCAATTATAATTTGTTGTGACAAATTCTTCTTATTTCTTTTTAAAATTATATAGATTGAGTGCATCCATCCAAGTATTACTATTTTTTTTTCCATTACTGATGTTGATTCTTAATTACATTTCAGGTTAGATTTGTTTGCTCGGAGCCCAGGGCCATGATTAATTCTATCACAGAACTATCAACATGCAAGTATGCACTTACAGTGCGATGCCCGACGCTTTGCAAGCATCCGTAAATCTCTCGCTCTCTTTTCTCTATTACCTACACAAACACATCCAGTTTTTCTGACTGTTAGAGGAAATATAACGACGAAATTAAGTGTTACTGGCAAGCATAAGTTTGTGACGGGGAGTTGAGAAAAGGAGAACTCTGCCCGTATCAACCGAATCACTTTAAAGAGCAACCTGCTGTCAGCTAAATTATGTAGCTCTATAATCGTGTAGCTCTACAATTGTGTACAAGCCAAACCAATAGGAGATAGGAAACTAGTATAGGAATTTAAAAGAATCGAAAGTTGACCCAACTTAAAAGAGTTCACATCAAGATGTCAATTTTATTGATAGATACAGTTTTTCGTTTTCGTTTCTCTTATTTATTATGACTGTGCAGGTTATTCCAGGAAGAGAGACCAGTGTGGTACATCATTAACTGCAACGTGCTCCCCGATGATTACAAGGAAACAAAGCGAGTCGACGAATTAGCAGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCTGAAGATTAATGTGAATATTTATATCATATAAGTTTTATCAACCAAACTAACCTTACAAAAGAAGCTCTTCCTCTGTAGATTTTTTCTCAAATTCAAATTATACAATTGCCGTGAAGTATCCATCGATTTTCAAGCCCCACGACGTGGAATTTCGTATGTTTTGATCATATTTGAATATATAGGTCAACCTGAAAGCTAGTCATTTTATGGGATTTATTGTTTTTGACAATGATTCAACTTATTGTAGAGGAAAAGTAATGAGAGTTTGAATGGGTAAACTCATAGCTTGCTTTTATTGAGACATTTACATCACTACCACAATAATAAACAATTGAAAGACCA CAAATATTCATTGGTCCAGCATGCGTGGAAGTGCATCACTCTCTATCGTCAACACAGGCCGTAAAACCGAAGACCCACTTCCTTCTTCCTCTCGCCGTCGTCGTCGCCGTCGTCGCCCTTCCGCCCCCAGCTGAAAATACCTAACCCTTCCACTTTGCTCCCTTCCTTTTCACCATTGTACGTTTGTTTCAGGACGCAGAAATGACGAAATTGATGTGGTTGATCCTTTTAGCTGGTAATCTTTGCCACTTTGCGTTAGCTGATCAGATCTTCCCAGCTCAATTAGGTGGTACATTTAGTCGCAACTCTCGTGGGCCAAAATACAATATAGAATTCCATCCACAAGACTCGCCTTACAATCCTGACGATGATCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGCGGAAAGCCAACTGTTCAAGTGAACATGAGTAGCATGATTGTGGAATCTGAGAAGCGAGTCAAATTGAAGACTCCAGATGAGCTGCTTGAGGCATTAAAAGAGCAATGCTTTGTCCGGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTAAAACAATTTCATTTGGAGGATGAAAAGGTAGTAGTTCAGGAATTTGTATTGGGCGTCTATGATGCAGAGGCAACTGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCAAAAGATGCATCCCAAAGAAGTAGTAAGTTGGAGGCATACATGAAAAAGCAAAAACTTGTTAGATTTGTTTGCTCGGAGCCCAGGGCCATGATTAATTCTATCACAGAACTATCAACATGCAAGTATGCACTTACAGTGCGATGCCCGACGCTTTGCAAGCATCCGTTATTCCAGGAAGAGAGACCAGTGTGGTACATCATTAACTGCAACGTGCTCCCCGATGATTACAAGGAAACAAAGCGAGTCGACGAATTAGCAGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCTGAAGATTAATGTGAATATTTATATCATATAAGTTTTATCAACCAAACTAACCTTACAAAAGAAGCTCTTCCTCTGTAGATTTTTTCTCAAATTCAAATTATACAATTGCCGTGAAGTATCCATCGATTTTCAAGCCCCACGACGTGGAATTTCGTATGTTTTGATCATATTTGAATATATAGGTCAACCTGAAAGCTAGTCATTTTATGGGATTTATTGTTTTTGACAATGATTCAACTTATTGTAGAGGAAAAGTAATGAGAGTTTGAATGGGTAAACTCATAGCTTGCTTTTATTGAGACATTTACATCACTACCACAATAATAAACAATTGAAAGACCA ATGACGAAATTGATGTGGTTGATCCTTTTAGCTGGTAATCTTTGCCACTTTGCGTTAGCTGATCAGATCTTCCCAGCTCAATTAGGTGGTACATTTAGTCGCAACTCTCGTGGGCCAAAATACAATATAGAATTCCATCCACAAGACTCGCCTTACAATCCTGACGATGATCAGGAATCTGTGTTTATGCCCAATAAAAATGGAAAGAATTACTTATGTTACTTGCCTAAGGTGGAGAAGTCCAAGAGCGGAAAGCCAACTGTTCAAGTGAACATGAGTAGCATGATTGTGGAATCTGAGAAGCGAGTCAAATTGAAGACTCCAGATGAGCTGCTTGAGGCATTAAAAGAGCAATGCTTTGTCCGGCAAGAGGGTTGGTGGACATATGAATTTTGTTACCAGAAAACACTAAAACAATTTCATTTGGAGGATGAAAAGGTAGTAGTTCAGGAATTTGTATTGGGCGTCTATGATGCAGAGGCAACTGCTAATCTCAATGAGAATCTCTCTGATATATCTACTTTGAAGGATCCTCGCTCAAAAGATGCATCCCAAAGAAGTAGTAAGTTGGAGGCATACATGAAAAAGCAAAAACTTGTTAGATTTGTTTGCTCGGAGCCCAGGGCCATGATTAATTCTATCACAGAACTATCAACATGCAAGTATGCACTTACAGTGCGATGCCCGACGCTTTGCAAGCATCCGTTATTCCAGGAAGAGAGACCAGTGTGGTACATCATTAACTGCAACGTGCTCCCCGATGATTACAAGGAAACAAAGCGAGTCGACGAATTAGCAGATGAGATTGTCATGGTTACAGACGTCAAATATCCAAAAAATGAATCTGAAGATTAA MTKLMWLILLAGNLCHFALADQIFPAQLGGTFSRNSRGPKYNIEFHPQDSPYNPDDDQESVFMPNKNGKNYLCYLPKVEKSKSGKPTVQVNMSSMIVESEKRVKLKTPDELLEALKEQCFVRQEGWWTYEFCYQKTLKQFHLEDEKVVVQEFVLGVYDAEATANLNENLSDISTLKDPRSKDASQRSSKLEAYMKKQKLVRFVCSEPRAMINSITELSTCKYALTVRCPTLCKHPLFQEERPVWYIINCNVLPDDYKETKRVDELADEIVMVTDVKYPKNESED Homology
BLAST of Lsi06G010700 vs. ExPASy Swiss-Prot
Match: Q8GWH3 (Protein OS-9 homolog OS=Arabidopsis thaliana OX=3702 GN=OS9 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 1.1e-73 Identity = 144/273 (52.75%), Postives = 192/273 (70.33%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy Swiss-Prot
Match: Q67WM9 (Protein OS-9 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=OS9 PE=2 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 2.3e-58 Identity = 129/279 (46.24%), Postives = 181/279 (64.87%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy Swiss-Prot
Match: Q13438 (Protein OS-9 OS=Homo sapiens OX=9606 GN=OS9 PE=1 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 5.4e-12 Identity = 68/271 (25.09%), Postives = 115/271 (42.44%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy Swiss-Prot
Match: Q3MHX6 (Protein OS-9 OS=Bos taurus OX=9913 GN=OS9 PE=2 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11 Identity = 66/250 (26.40%), Postives = 106/250 (42.40%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy Swiss-Prot
Match: Q5RKH6 (Protein OS-9 OS=Rattus norvegicus OX=10116 GN=Os9 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.6e-11 Identity = 54/185 (29.19%), Postives = 92/185 (49.73%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy TrEMBL
Match: A0A1S3B9X7 (protein OS-9 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487399 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 9.6e-137 Identity = 250/294 (85.03%), Postives = 264/294 (89.80%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy TrEMBL
Match: A0A6J1EY24 (protein OS-9 homolog OS=Cucurbita moschata OX=3662 GN=LOC111439427 PE=4 SV=1) HSP 1 Score: 493.0 bits (1268), Expect = 8.1e-136 Identity = 243/293 (82.94%), Postives = 263/293 (89.76%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy TrEMBL
Match: A0A1S3B986 (protein OS-9 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487399 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 2.4e-135 Identity = 250/295 (84.75%), Postives = 264/295 (89.49%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy TrEMBL
Match: A0A0A0LWI4 (PRKCSH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G264000 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.5e-134 Identity = 249/295 (84.41%), Postives = 262/295 (88.81%), Query Frame = 0
BLAST of Lsi06G010700 vs. ExPASy TrEMBL
Match: A0A6J1HVT6 (protein OS-9 homolog OS=Cucurbita maxima OX=3661 GN=LOC111467906 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 2.4e-132 Identity = 237/293 (80.89%), Postives = 260/293 (88.74%), Query Frame = 0
BLAST of Lsi06G010700 vs. NCBI nr
Match: XP_038878474.1 (protein OS-9 homolog isoform X2 [Benincasa hispida]) HSP 1 Score: 520.0 bits (1338), Expect = 1.3e-143 Identity = 263/293 (89.76%), Postives = 269/293 (91.81%), Query Frame = 0
BLAST of Lsi06G010700 vs. NCBI nr
Match: XP_038878473.1 (protein OS-9 homolog isoform X1 [Benincasa hispida]) HSP 1 Score: 515.4 bits (1326), Expect = 3.2e-142 Identity = 263/294 (89.46%), Postives = 269/294 (91.50%), Query Frame = 0
BLAST of Lsi06G010700 vs. NCBI nr
Match: XP_023530346.1 (protein OS-9 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 496.5 bits (1277), Expect = 1.5e-136 Identity = 244/293 (83.28%), Postives = 264/293 (90.10%), Query Frame = 0
BLAST of Lsi06G010700 vs. NCBI nr
Match: XP_008443924.1 (PREDICTED: protein OS-9 homolog isoform X2 [Cucumis melo]) HSP 1 Score: 496.1 bits (1276), Expect = 2.0e-136 Identity = 250/294 (85.03%), Postives = 264/294 (89.80%), Query Frame = 0
BLAST of Lsi06G010700 vs. NCBI nr
Match: XP_022932897.1 (protein OS-9 homolog [Cucurbita moschata]) HSP 1 Score: 493.0 bits (1268), Expect = 1.7e-135 Identity = 243/293 (82.94%), Postives = 263/293 (89.76%), Query Frame = 0
BLAST of Lsi06G010700 vs. TAIR 10
Match: AT5G35080.1 (INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 278.1 bits (710), Expect = 7.9e-75 Identity = 144/273 (52.75%), Postives = 192/273 (70.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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