Lsi06G010680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G010680
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSterile alpha motif (SAM) domain-containing protein
Locationchr06: 20917442 .. 20918236 (-)
RNA-Seq ExpressionLsi06G010680
SyntenyLsi06G010680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

mRNA sequence

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

Coding sequence (CDS)

ATGGACTGGTTCTCTTGGCTCTCAAGAACCGGCCTCGACCCACTTCACACCTACGAATACGGCCTTCTTTTTGCCCGAAATGCCCTCAATCCCGACGACATTCCTCGTTTCAACCACCATTTTCTTCAAAATATCGGAATCTCCATCGCCAAACACCGCCTCGAGATTCTCAAACTCGCCAAATCCCACTCCCACCAACAAACCCATAACAAATCCCTTCTTTCCGCCTTCACCAAGACCAAAAATTGCCTCAGAAACTGCCTCCGAAAGCTAATTTTACCCACCGCCAGGCCCGAGAAGGGCCTTTTCCGGGAAGACGCGGCGGTGATTTCCCCTGAGCCGCCGACCGTGGAAGAGGAGGAGCAGGAGGTCAAGGTTAAGGAAGTCCTCAAGCCGCCGAGACGACGGAGTAAACACGTGTCGTTGTCGGGGCCTTTGGACGGGAGAACGCACGAGAAGTTCGTGATGAGCAGTAAGAGCTTGAAGTTATCTGGGCCGTTGGATAGGAAAGAGAGGCCCCCGCTTATGTTTCCGAGAAGCCCAAGAACATCTGGGCCTCTAGATGGGAGAATGTCGGATTGGGCCTTGAGTAAAAGCCCAAAATTGAATGGGCCGCCGCAAGGGAGAATGATGAGGCTGATTCCGCCAAGCCGGAGCCCAAGAGTATCTGGGCCGTTAGATGGACGAGATGGAAGCCCAAATATTTGCTGCCGGTGTAATAGGGAAAGAATAGAAACCGATGATGATTATCATTCCTTGTGGGTTTCATTGTTTTATGACATGAAGCCAACTTAA

Protein sequence

MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLAKSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEEEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPRSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT
Homology
BLAST of Lsi06G010680 vs. ExPASy TrEMBL
Match: A0A6J1HAF4 (uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC111461567 PE=4 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 3.1e-121
Identity = 218/265 (82.26%), Postives = 237/265 (89.43%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAV+SPEP T  E+
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 199

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP ICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 259

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

BLAST of Lsi06G010680 vs. ExPASy TrEMBL
Match: A0A6J1JJY8 (uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262 PE=4 SV=1)

HSP 1 Score: 434.1 bits (1115), Expect = 4.2e-118
Identity = 215/265 (81.13%), Postives = 232/265 (87.55%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLKPEDIPRFNHDFLQRIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K    + T  K LLSA  KTKNCLRNCLRKLI   A+ EKG+FREDAAVISPEP T  E+
Sbjct: 61  KCDREEATQKKLLLSALAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 120

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++ +VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  M PR
Sbjct: 121 LSRKQEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MVPR 180

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR SGPLDGR+SDWA S+SPK+NGPPQGRMMRLIPPSRSPRVS PLDGRDGSP ICCRC
Sbjct: 181 SPRLSGPLDGRVSDWASSRSPKMNGPPQGRMMRLIPPSRSPRVSEPLDGRDGSPRICCRC 240

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

BLAST of Lsi06G010680 vs. ExPASy TrEMBL
Match: A0A5A7U992 (Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00390 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.3e-116
Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH +HQ   N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 EEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERP------ 180
           +E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKERP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PLMFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGR 240
              P MFPRSPRTSGPLDGR+SDW LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGR
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           DGSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

BLAST of Lsi06G010680 vs. ExPASy TrEMBL
Match: A0A1S3B951 (uncharacterized protein LOC103487398 OS=Cucumis melo OX=3656 GN=LOC103487398 PE=4 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.3e-116
Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH +HQ   N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSPAPDK-------PIISPEPPPSSL 120

Query: 121 EEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERP------ 180
           +E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKERP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PLMFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGR 240
              P MFPRSPRTSGPLDGR+SDW LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGR
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           DGSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

BLAST of Lsi06G010680 vs. ExPASy TrEMBL
Match: A0A5D3CF00 (Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00280 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 3.0e-116
Identity = 221/275 (80.36%), Postives = 235/275 (85.45%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL P+DIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPEDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSH-SHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH +HQ   N  L+SAF KTK CLRNCLR+LI P+  P+K        +ISPEPP    
Sbjct: 61  KSHTTHQPNLNNPLISAFFKTKICLRNCLRRLISPSHAPDK-------PIISPEPPPSSL 120

Query: 121 EEQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERP------ 180
           +E +VKVKEVLKPPRRRSKHVSLSGPLD RTHEKFVMSSKSLKLSGPLDRKERP      
Sbjct: 121 DEPKVKVKEVLKPPRRRSKHVSLSGPLD-RTHEKFVMSSKSLKLSGPLDRKERPPPSPSP 180

Query: 181 ---PLMFPRSPRTSGPLDGRMSDWALS-KSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGR 240
              P MFPRSPRTSGPLDGR+SDW LS KSPK+NGPPQGRMMRLIPPSRSPRVSGPLDGR
Sbjct: 181 SPLPPMFPRSPRTSGPLDGRISDWGLSNKSPKVNGPPQGRMMRLIPPSRSPRVSGPLDGR 240

Query: 241 DGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
           DGSP ICCRCNRER+E++DDYHSLWVSLFYDMKPT
Sbjct: 241 DGSPRICCRCNRERMESEDDYHSLWVSLFYDMKPT 267

BLAST of Lsi06G010680 vs. NCBI nr
Match: XP_038879652.1 (uncharacterized protein LOC120071438 [Benincasa hispida])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 240/266 (90.23%), Postives = 251/266 (94.36%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGLLFARNAL PDDIPRFNHHFLQ IGISIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALKPDDIPRFNHHFLQKIGISIAKHRLEILKLA 60

Query: 61  KSHSHQQ-THNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEE 120
           KSH+HQQ T N  LLSAFTKTK CLRNCLRKLILPTARP+KG+FRED AVISPEPPT++ 
Sbjct: 61  KSHTHQQPTLNNPLLSAFTKTKICLRNCLRKLILPTARPDKGVFREDTAVISPEPPTLD- 120

Query: 121 EEQEVKVKEVLK-PPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFP 180
              EVKVKEV+K PP+RRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPP MFP
Sbjct: 121 ---EVKVKEVVKPPPKRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPP-MFP 180

Query: 181 RSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCR 240
           RSPRTSGPLDGR+SDWALSKSPK+NGPPQGRMM+LIPPSRSPRVSGPLDGRDGSP ICCR
Sbjct: 181 RSPRTSGPLDGRVSDWALSKSPKVNGPPQGRMMKLIPPSRSPRVSGPLDGRDGSPRICCR 240

Query: 241 CNRERIETDDDYHSLWVSLFYDMKPT 265
           CNRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 241 CNRERMETDDDYHSLWVSLFYDMKPT 261

BLAST of Lsi06G010680 vs. NCBI nr
Match: KAG6589808.1 (hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 445.3 bits (1144), Expect = 3.7e-121
Identity = 218/265 (82.26%), Postives = 238/265 (89.81%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K +  + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAV+SPEP T  E+
Sbjct: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 180

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP ICCRC
Sbjct: 181 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 240

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

BLAST of Lsi06G010680 vs. NCBI nr
Match: KAG7023481.1 (hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 444.9 bits (1143), Expect = 4.9e-121
Identity = 217/265 (81.89%), Postives = 238/265 (89.81%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 1   MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 60

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K +  + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAV+SPEP T  E+
Sbjct: 61  KCNREEATQKKLLLSAFVKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 120

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 121 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 180

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP +CCRC
Sbjct: 181 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRVCCRC 240

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 241 NRERMETDDDYHSLWVSLFYDMKPT 263

BLAST of Lsi06G010680 vs. NCBI nr
Match: XP_023516525.1 (uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 444.9 bits (1143), Expect = 4.9e-121
Identity = 219/265 (82.64%), Postives = 237/265 (89.43%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAVISPEP T  E+
Sbjct: 80  KCDREEATQKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVISPEPITYSED 139

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 199

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP ICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPKICCRC 259

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

BLAST of Lsi06G010680 vs. NCBI nr
Match: XP_022960905.1 (uncharacterized protein LOC111461567 [Cucurbita moschata])

HSP 1 Score: 444.5 bits (1142), Expect = 6.4e-121
Identity = 218/265 (82.26%), Postives = 237/265 (89.43%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLSRTGLDPLHTYEYGL+FARN L P+DIPRFNH FLQ IG+SIAKHRLEILKLA
Sbjct: 20  MDWFSWLSRTGLDPLHTYEYGLVFARNGLRPEDIPRFNHDFLQKIGVSIAKHRLEILKLA 79

Query: 61  KSHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISPEPPTVEEE 120
           K    + T  K LLSAF KTKNCLRNCLRKLI   A+ EKG+FREDAAV+SPEP T  E+
Sbjct: 80  KCDREEATRKKLLLSAFAKTKNCLRNCLRKLIFTNAKSEKGIFREDAAVVSPEPITYSED 139

Query: 121 -EQEVKVKEVLKPPRRRSKHVSLSGPLDGRTHEKFVMSSKSLKLSGPLDRKERPPLMFPR 180
             ++++VKEVLKPP+RRSKHVSLSGPLDGRTHEK + +SKSLKLSGPLDRKERP  MFPR
Sbjct: 140 LSRKLEVKEVLKPPKRRSKHVSLSGPLDGRTHEKLMTNSKSLKLSGPLDRKERP--MFPR 199

Query: 181 SPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPNICCRC 240
           SPR+SGPLDGR+SDWA S+SPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSP ICCRC
Sbjct: 200 SPRSSGPLDGRVSDWASSRSPKLNGPPQGRMMRLIPPSRSPRVSGPLDGRDGSPRICCRC 259

Query: 241 NRERIETDDDYHSLWVSLFYDMKPT 265
           NRER+ETDDDYHSLWVSLFYDMKPT
Sbjct: 260 NRERMETDDDYHSLWVSLFYDMKPT 282

BLAST of Lsi06G010680 vs. TAIR 10
Match: AT2G12462.1 (BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-containing protein (TAIR:AT1G15760.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 128.6 bits (322), Expect = 7.2e-30
Identity = 101/291 (34.71%), Postives = 146/291 (50.17%), Query Frame = 0

Query: 1   MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
           MDWFSWLS+T LDP  +YEYGL+FA+  L  +DI  FNH+FL+ +G+++ KHR+EILKL+
Sbjct: 1   MDWFSWLSKTDLDPTLSYEYGLIFAQKKLQGEDIALFNHNFLRRLGVTVTKHRVEILKLS 60

Query: 61  K-------SHSHQQTHNKSLLSAFTKTKNCLRNCLRKLILPTARPEKGLFREDAAVISP- 120
           K       S++H+    K L+S   K    + N          R  K L     AV+ P 
Sbjct: 61  KRETQALSSYNHRPVSAK-LISVVIKATKSVGN----------RLNKWLSLGGTAVVEPL 120

Query: 121 ----EPPTV-----------EEEEQEVKVKEVLKPPRRRSKHVSLSGPLD---GRTHEKF 180
                PP              +   E  V +V + P  + K +  SGPLD   G   +  
Sbjct: 121 KEKQSPPPAYRTGAFLTGNNNKVNAEKAVVQVERLPVIKRKRIVKSGPLDRNHGIQEKMT 180

Query: 181 VMSSKSLKLSGPLDRKERPPLMFP-RSPRTSGPLDGRMSDWALSKSPKLNGPPQGRMMRL 240
           ++S++S+ LSGPLDR  +  L+   RSP  SG LDG +++                  RL
Sbjct: 181 LVSNRSMNLSGPLDRSVQERLILAYRSPIVSGQLDGNLNE------------------RL 240

Query: 241 IPPSRSPRVSGPLDGRDGSPNICCRCNRERIETDDDYHSLWVSLFYDMKPT 265
                  R+SGPL GR  SP++    N+     DDD  + W ++F+++KPT
Sbjct: 241 -------RLSGPLKGRPPSPSVYVEYNKR----DDD--TRWDAMFHNLKPT 249

BLAST of Lsi06G010680 vs. TAIR 10
Match: AT1G80520.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 89.4 bits (220), Expect = 4.8e-18
Identity = 42/61 (68.85%), Postives = 48/61 (78.69%), Query Frame = 0

Query: 1  MDWFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLA 60
          MDWFSWLSRT L+    YEYGL F+ N L  +DI  FNH FLQ++GISIAKHRLEILKLA
Sbjct: 1  MDWFSWLSRTNLEASLIYEYGLSFSNNELEYEDIAYFNHEFLQSMGISIAKHRLEILKLA 60

Query: 61 K 62
          +
Sbjct: 61 R 61

BLAST of Lsi06G010680 vs. TAIR 10
Match: AT1G15760.1 (Sterile alpha motif (SAM) domain-containing protein )

HSP 1 Score: 87.0 bits (214), Expect = 2.4e-17
Identity = 47/95 (49.47%), Postives = 62/95 (65.26%), Query Frame = 0

Query: 3  WFSWLSRTGLDPLHTYEYGLLFARNALNPDDIPRFNHHFLQNIGISIAKHRLEILKLAKS 62
          WFSWLSRT L+P   +EYGL F++N L  +DI  F+H FLQ++GISIAKHRLEILKLA+ 
Sbjct: 5  WFSWLSRTNLEPSLIHEYGLSFSQNELEHEDISYFDHEFLQSMGISIAKHRLEILKLARR 64

Query: 63 HSHQQTHNKS-----LLSAFTKTKNCLRNCLRKLI 93
                   S     +++A  KT+ CL + +R  I
Sbjct: 65 DRKNSPPLTSRSISRVVTAIKKTRKCLSDHVRAWI 99

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1HAF43.1e-12182.26uncharacterized protein LOC111461567 OS=Cucurbita moschata OX=3662 GN=LOC1114615... [more]
A0A6J1JJY84.2e-11881.13uncharacterized protein LOC111485262 OS=Cucurbita maxima OX=3661 GN=LOC111485262... [more]
A0A5A7U9922.3e-11680.36Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A1S3B9512.3e-11680.36uncharacterized protein LOC103487398 OS=Cucumis melo OX=3656 GN=LOC103487398 PE=... [more]
A0A5D3CF003.0e-11680.36Sterile alpha motif, type 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf... [more]
Match NameE-valueIdentityDescription
XP_038879652.11.4e-13190.23uncharacterized protein LOC120071438 [Benincasa hispida][more]
KAG6589808.13.7e-12182.26hypothetical protein SDJN03_15231, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7023481.14.9e-12181.89hypothetical protein SDJN02_14506, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023516525.14.9e-12182.64uncharacterized protein LOC111780375 [Cucurbita pepo subsp. pepo][more]
XP_022960905.16.4e-12182.26uncharacterized protein LOC111461567 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
AT2G12462.17.2e-3034.71BEST Arabidopsis thaliana protein match is: Sterile alpha motif (SAM) domain-con... [more]
AT1G80520.14.8e-1868.85Sterile alpha motif (SAM) domain-containing protein [more]
AT1G15760.12.4e-1749.47Sterile alpha motif (SAM) domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 1..70
e-value: 5.0E-10
score: 40.8
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 12..67
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 159..209
NoneNo IPR availablePANTHERPTHR33915OSJNBA0033G05.11 PROTEINcoord: 1..264
NoneNo IPR availablePANTHERPTHR33915:SF3STERILE ALPHA MOTIF (SAM) DOMAIN PROTEINcoord: 1..264
NoneNo IPR availableCDDcd09487SAM_superfamilycoord: 2..61
e-value: 7.5556E-9
score: 48.7749

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G010680.1Lsi06G010680.1mRNA