Lsi06G010630 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G010630
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic
Location	chr06: 20842185 .. 20844036 (-)
RNA-Seq Expression	Lsi06G010630
Synteny	Lsi06G010630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTATAGAATTATCTCTAATTTTGAAGAAACAAAGGAAGTGAAACTTGAACCTAAATTGGATAAGTAAAACAAGATGGAGCAAGAAGATAAACCAGACAACGCCTCCGCCTCCCACCATTTGGGATCGTTTCCATGTCCACTTCCGCCATTAAACCTTCACTTCCACTTTCTCCTTCTTTCAATTACCCATCTCTCTCACCCATTTCATGGAGTTTTTGCAGACCCATTTCAGATTCTTCCCCTTCTTGCCCTATTTCCATCTCCTCTCGGCATCGACGACAAGTATCTGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTCGACCTCTCTTTGCAAGATGATGATGATGGTAACTCCTCAATCTATTCCTGCTTTAGTTTCTGAATTTGTTCTGTACCCATTTCGATTTGTTCATTCCAGAATTAGTTGAAATCAGAATTGTGATGATTGAGGAAAGGGGAAGGGGGGAATTTTCTTTTCAATCCATGAGCATTGGATGAATTGCGTAGGTCGATTATTTGGTTGTTTGAATGCTTTGAATTTATTTTCTGTGGCTTCCCTGTTGATATTTATGTTATTTACGTTTTTTTGCCTAAGAGTTTAGACGGGTGCGCGTTAACACATGAACCACGTAAATCTCTATATCAATTTCTCTACTCTTTACCTTTTCTGTGTTGCTTTGATTGTCGATTTCTTAACATTTGGATTGGTAAATGATCAGTCATTTAAAGAGAATTGCCCTGTTCTTTGATGATATTCAAATTCATTGCTGTCTTTCGGAGAAAAGAAAAGTATAAACTGTTAGGGAAGATTTGACTAACTTTCCCTTGAAATGCTATGGAAACAAAAGAAAAGAAAGAACTATTGTGGTGGTTATGTATATATCTAGAGAGTTCTTGAAATTTTGATGAGTTTTAACTGATTGTTAAGAACAGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGACAACGATGCAATTCGTCGTCTAGACTTATCATCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTAGTAAGTTTTGGGTTGGTTGATAGGTTTATATCATTGTTTTGAAATTAGTTCTGTGATCCCTGTCCCTGATGAGTTCTCTTTCCTAGTATTGTTACAGCTGAGCCAAAACAATTCCTTGAAAGTACAATTGGTTTTACCATTAATTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCTGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCTATCTATCCATGGTTACCTGTTCTGTTGGACTGGAGAGCCGGAGAGCTTGCTCGATATGCAGCGATGCTCGTCCCTCACCAGGTGATGCTATTGCTAGTGATGAAATGCTATGAAAATGTTGATATTAAGGAGTGTGAGAGACTTATTTTTGGGATCATTTTGGTTGCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAAGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGGAACATGAGATTCCAAAGCCAAGATTGAAGACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCTCCACCATGAAACGCAAGACCGTGCTCGAAACTCCTGTTCGATACGATCAATTTGAGTACTGGTATTATTTTCTCAAAATTAGAGTTGTAATTCAGTAATAGTATGTTCTTAACTCTTCAAACTATTTACATAGCTTATTATTGTTGATGAATGAGTAATTTAGTTATGGAGCCATGAAAAAATATTTGTT

mRNA sequence

TTTCTATAGAATTATCTCTAATTTTGAAGAAACAAAGGAAGTGAAACTTGAACCTAAATTGGATAAGTAAAACAAGATGGAGCAAGAAGATAAACCAGACAACGCCTCCGCCTCCCACCATTTGGGATCGTTTCCATGTCCACTTCCGCCATTAAACCTTCACTTCCACTTTCTCCTTCTTTCAATTACCCATCTCTCTCACCCATTTCATGGAGTTTTTGCAGACCCATTTCAGATTCTTCCCCTTCTTGCCCTATTTCCATCTCCTCTCGGCATCGACGACAAGTATCTGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTCGACCTCTCTTTGCAAGATGATGATGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGACAACGATGCAATTCGTCGTCTAGACTTATCATCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTACTGAGCCAAAACAATTCCTTGAAAGTACAATTGGTTTTACCATTAATTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCTGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCTATCTATCCATGGTTACCTGTTCTGTTGGACTGGAGAGCCGGAGAGCTTGCTCGATATGCAGCGATGCTCGTCCCTCACCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAAGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGGAACATGAGATTCCAAAGCCAAGATTGAAGACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCTCCACCATGAAACGCAAGACCGTGCTCGAAACTCCTGTTCGATACGATCAATTTGAGTACTGGTATTATTTTCTCAAAATTAGAGTTGTAATTCAGTAATAGTATGTTCTTAACTCTTCAAACTATTTACATAGCTTATTATTGTTGATGAATGAGTAATTTAGTTATGGAGCCATGAAAAAATATTTGTT

Coding sequence (CDS)

ATGTCCACTTCCGCCATTAAACCTTCACTTCCACTTTCTCCTTCTTTCAATTACCCATCTCTCTCACCCATTTCATGGAGTTTTTGCAGACCCATTTCAGATTCTTCCCCTTCTTGCCCTATTTCCATCTCCTCTCGGCATCGACGACAAGTATCTGCCTCGGTTGCCTTCAATCCTTCCGGAAATTTCGACCTCTCTTTGCAAGATGATGATGATGATTCTCCTAAAGTTGCACCTCCAATGCCACCCACTGAAGGTCGATTCGACGTGGTTATAGACAACGATGCAATTCGTCGTCTAGACTTATCATCATTTCAGAAAACAACTGGAATAATTTCACCTTTAGCTACTGAGCCAAAACAATTCCTTGAAAGTACAATTGGTTTTACCATTAATTATACCCGAGAAGATCCTTACGATCGACGTGAATTATCTGAATACCCTGACATAAGGCTGTGGTTTGTGAGGCTTGATTCTATCTATCCATGGTTACCTGTTCTGTTGGACTGGAGAGCCGGAGAGCTTGCTCGATATGCAGCGATGCTCGTCCCTCACCAGATAAGTATGAGAATGGGAATTGTGTTCAATCCTGAAGCTTTGGAGTTGTTTGTGATGAAGAAAGTTTTTATTGTGTATTCATGGTTGAAGGAACATGAGATTCCAAAGCCAAGATTGAAGACAGCTAATATGGCTAGGATGCTTGGGTTTGGGATTGGAGATGAACTTTTTGACTTGATAGATCAACATCCAGTTGCTCCACCATGA

Protein sequence

MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPSGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPKQFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGDELFDLIDQHPVAPP

Homology

[Close]

BLAST of Lsi06G010630 vs. ExPASy Swiss-Prot
Match: O82258 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR6 PE=2 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 6.0e-87
Identity = 166/253 (65.61%), Postives = 197/253 (77.87%), Query Frame = 0


Query: 1   MSTSAIKPSLP-LSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNP 60
           M+T A+   LP L PS  + SL P+      P  +++  C   +  R    V+ SVAFNP
Sbjct: 1   MATKAV--LLPWLIPSPRHVSLFPV---VQLPALETAGWC---VRKRRAEDVAVSVAFNP 60

Query: 61  SGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISP---LA 120
           SGNFD+S  ++D DS KV PPMPPT GR++VVIDND+I RLDLS FQ+  GI SP     
Sbjct: 61  SGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGV 120

Query: 121 TEPKQFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELA 180
            EPK++L+ TIGFTINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELA
Sbjct: 121 AEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELA 180

Query: 181 RYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGF 240
           RYAAMLVPHQ+S+RMG+VFNPEALELFVM KVF+VY WLK H +PKPRLKT++MARMLGF
Sbjct: 181 RYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGF 240

Query: 241 GIGDELFDLIDQH 250
           GIGDELFDLID +
Sbjct: 241 GIGDELFDLIDHN 245

[Close]

BLAST of Lsi06G010630 vs. ExPASy TrEMBL
Match: A0A6J1JFH1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485264 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.1e-131
Identity = 235/254 (92.52%), Postives = 241/254 (94.88%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MST AIKP LPLSPSFN+PS SPISWSFCRPISDSSPSC I  SSR RRQVSASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDSPKV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]

BLAST of Lsi06G010630 vs. ExPASy TrEMBL
Match: A0A6J1E1R8 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430041 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 9.2e-131
Identity = 234/254 (92.13%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MST AIKP LPLSPSFN+PS SPISWSFCRPISDSSP C I  SSR RRQVSASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of Lsi06G010630 vs. ExPASy TrEMBL
Match: A0A0A0LTF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.2e-130
Identity = 233/254 (91.73%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MST  IKPS PLSPSFN+PS SPISWSF RPISDSSPS  IS SSRHRRQ+SASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDS KVAPPMPPTEGRFDVVIDNDAIR LDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSSKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDS+YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of Lsi06G010630 vs. ExPASy TrEMBL
Match: A0A1S3B982 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103487393 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.8e-130
Identity = 234/254 (92.13%), Postives = 239/254 (94.09%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MST  IKP LPLSPSFN+PS SPISWSF RPI   SPS PIS SSRHR Q+SASVAFNPS
Sbjct: 1   MSTPTIKPPLPLSPSFNHPSRSPISWSFSRPI---SPSSPISTSSRHRPQLSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDSPKVAPPMPPTEGRFDVVIDNDAIR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDS+YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 251

[Close]

BLAST of Lsi06G010630 vs. ExPASy TrEMBL
Match: A0A6J1C097 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111007292 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 2.3e-121
Identity = 218/254 (85.83%), Postives = 228/254 (89.76%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           M+T AIKP LPLSPS N PS SP SWSFCRP              RHRRQV+ASVAFNPS
Sbjct: 1   MTTPAIKPLLPLSPSINQPSRSPASWSFCRP-----------TFPRHRRQVAASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNF+LSLQDD+DDSPKVAPPMPPT+GRFDVVIDND IRRLDLS FQKTTGIISPL+TEPK
Sbjct: 61  GNFELSLQDDEDDSPKVAPPMPPTDGRFDVVIDNDTIRRLDLSPFQKTTGIISPLSTEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDS+YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVM KVF VYSWLK+H+IPKPRLKT NMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMNKVFTVYSWLKQHDIPKPRLKTGNMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQ+PVAPP
Sbjct: 241 ELFDLIDQNPVAPP 243

[Close]

BLAST of Lsi06G010630 vs. NCBI nr
Match: XP_038876902.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida])

HSP 1 Score: 504.6 bits (1298), Expect = 5.0e-139
Identity = 247/254 (97.24%), Postives = 250/254 (98.43%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MSTSAIKPSLPL PSFN+PS SPISWSFCRPISDSSPS PIS SSRHRRQVSASVAFNPS
Sbjct: 1   MSTSAIKPSLPLPPSFNHPSRSPISWSFCRPISDSSPSFPISTSSRHRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK
Sbjct: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDS+YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           ML+PHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLIPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of Lsi06G010630 vs. NCBI nr
Match: XP_022987841.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 479.2 bits (1232), Expect = 2.2e-131
Identity = 235/254 (92.52%), Postives = 241/254 (94.88%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MST AIKP LPLSPSFN+PS SPISWSFCRPISDSSPSC I  SSR RRQVSASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPSCSIFSSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDSPKV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSPKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKKHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPV PP
Sbjct: 241 ELFDLIDQHPVVPP 254

[Close]

BLAST of Lsi06G010630 vs. NCBI nr
Match: XP_022921932.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita moschata])

HSP 1 Score: 476.1 bits (1224), Expect = 1.9e-130
Identity = 234/254 (92.13%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MST AIKP LPLSPSFN+PS SPISWSFCRPISDSSP C I  SSR RRQVSASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHPSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of Lsi06G010630 vs. NCBI nr
Match: XP_011655753.1 (protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis sativus] >KGN65205.1 hypothetical protein Csa_020038 [Cucumis sativus])

HSP 1 Score: 475.7 bits (1223), Expect = 2.5e-130
Identity = 233/254 (91.73%), Postives = 240/254 (94.49%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MST  IKPS PLSPSFN+PS SPISWSF RPISDSSPS  IS SSRHRRQ+SASV+FNPS
Sbjct: 1   MSTPTIKPSFPLSPSFNHPSRSPISWSFSRPISDSSPSSLISTSSRHRRQLSASVSFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           GNFDLS QDDDDDS KVAPPMPPTEGRFDVVIDNDAIR LDLSSFQ TTGI+SPLATEPK
Sbjct: 61  GNFDLSFQDDDDDSSKVAPPMPPTEGRFDVVIDNDAIRCLDLSSFQTTTGIVSPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDPYDRRELSEYPDIRLWFVRLDS+YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSVYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLK ANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKAANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of Lsi06G010630 vs. NCBI nr
Match: KAG6589804.1 (Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129
Identity = 233/254 (91.73%), Postives = 239/254 (94.09%), Query Frame = 0


Query: 1   MSTSAIKPSLPLSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNPS 60
           MST AIKP LPLSPSFN+ S SPISWSFCRPISDSSP C I  SSR RRQVSASVAFNPS
Sbjct: 1   MSTPAIKPLLPLSPSFNHSSRSPISWSFCRPISDSSPFCSIFTSSRQRRQVSASVAFNPS 60

Query: 61  GNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISPLATEPK 120
           G FDLSLQDD+DDS KV+PPMPPTEGRFDVVIDND IR LDLSSFQKTTGIISPLATEPK
Sbjct: 61  GKFDLSLQDDEDDSSKVSPPMPPTEGRFDVVIDNDVIRHLDLSSFQKTTGIISPLATEPK 120

Query: 121 QFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAA 180
           QFLE TIGFTINYTREDP+DRRELSEYPDIRLWFVRLDS YPWLPVLLDWRAGELARYAA
Sbjct: 121 QFLERTIGFTINYTREDPHDRRELSEYPDIRLWFVRLDSEYPWLPVLLDWRAGELARYAA 180

Query: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGD 240
           MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLK+H+IPKPRLKTANMARMLGFGIGD
Sbjct: 181 MLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKQHDIPKPRLKTANMARMLGFGIGD 240

Query: 241 ELFDLIDQHPVAPP 255
           ELFDLIDQHPVAPP
Sbjct: 241 ELFDLIDQHPVAPP 254

[Close]

BLAST of Lsi06G010630 vs. TAIR 10
Match: AT2G47910.1 (chlororespiratory reduction 6 )

HSP 1 Score: 322.0 bits (824), Expect = 4.3e-88
Identity = 166/253 (65.61%), Postives = 197/253 (77.87%), Query Frame = 0


Query: 1   MSTSAIKPSLP-LSPSFNYPSLSPISWSFCRPISDSSPSCPISISSRHRRQVSASVAFNP 60
           M+T A+   LP L PS  + SL P+      P  +++  C   +  R    V+ SVAFNP
Sbjct: 1   MATKAV--LLPWLIPSPRHVSLFPV---VQLPALETAGWC---VRKRRAEDVAVSVAFNP 60

Query: 61  SGNFDLSLQDDDDDSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISP---LA 120
           SGNFD+S  ++D DS KV PPMPPT GR++VVIDND+I RLDLS FQ+  GI SP     
Sbjct: 61  SGNFDISAFENDQDSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGV 120

Query: 121 TEPKQFLESTIGFTINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELA 180
            EPK++L+ TIGFTINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELA
Sbjct: 121 AEPKRYLDRTIGFTINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELA 180

Query: 181 RYAAMLVPHQISMRMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGF 240
           RYAAMLVPHQ+S+RMG+VFNPEALELFVM KVF+VY WLK H +PKPRLKT++MARMLGF
Sbjct: 181 RYAAMLVPHQMSLRMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGF 240

Query: 241 GIGDELFDLIDQH 250
           GIGDELFDLID +
Sbjct: 241 GIGDELFDLIDHN 245

[Close]

BLAST of Lsi06G010630 vs. TAIR 10
Match: AT2G47910.2 (chlororespiratory reduction 6 )

HSP 1 Score: 294.3 bits (752), Expect = 9.5e-80
Identity = 138/180 (76.67%), Postives = 157/180 (87.22%), Query Frame = 0


Query: 73  DSPKVAPPMPPTEGRFDVVIDNDAIRRLDLSSFQKTTGIISP---LATEPKQFLESTIGF 132
           DS KV PPMPPT GR++VVIDND+I RLDLS FQ+  GI SP      EPK++L+ TIGF
Sbjct: 18  DSDKVEPPMPPTTGRYEVVIDNDSIGRLDLSPFQRAIGITSPDDFGVAEPKRYLDRTIGF 77

Query: 133 TINYTREDPYDRRELSEYPDIRLWFVRLDSIYPWLPVLLDWRAGELARYAAMLVPHQISM 192
           TINY REDP D RELSEYPD+RLWFVRLD++YPWLP+LLDWRAGELARYAAMLVPHQ+S+
Sbjct: 78  TINYKREDPGDPRELSEYPDVRLWFVRLDAMYPWLPLLLDWRAGELARYAAMLVPHQMSL 137

Query: 193 RMGIVFNPEALELFVMKKVFIVYSWLKEHEIPKPRLKTANMARMLGFGIGDELFDLIDQH 250
           RMG+VFNPEALELFVM KVF+VY WLK H +PKPRLKT++MARMLGFGIGDELFDLID +
Sbjct: 138 RMGVVFNPEALELFVMNKVFVVYPWLKRHGVPKPRLKTSDMARMLGFGIGDELFDLIDHN 197

The following BLAST results are available for this feature:

BLAST of Lsi06G010630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82258	6.0e-87	65.61	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Arabidopsis thaliana OX=...	[more]

BLAST of Lsi06G010630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JFH1	1.1e-131	92.52	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita max...	[more]
A0A6J1E1R8	9.2e-131	92.13	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 OS=Cucurbita mos...	[more]
A0A0A0LTF0	1.2e-130	91.73	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G264560 PE=4 SV=1	[more]
A0A1S3B982	7.8e-130	92.13	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Cucumis melo OX=3656 GN=...	[more]
A0A6J1C097	2.3e-121	85.83	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic OS=Momordica charantia OX=3...	[more]

BLAST of Lsi06G010630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876902.1	5.0e-139	97.24	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Benincasa hispida]	[more]
XP_022987841.1	2.2e-131	92.52	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita maxim...	[more]
XP_022921932.1	1.9e-130	92.13	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic isoform X1 [Cucurbita mosch...	[more]
XP_011655753.1	2.5e-130	91.73	protein CHLORORESPIRATORY REDUCTION 6, chloroplastic [Cucumis sativus] >KGN65205...	[more]
KAG6589804.1	1.6e-129	91.73	Protein CHLORORESPIRATORY REDUCTION 6, chloroplastic, partial [Cucurbita argyros...	[more]

BLAST of Lsi06G010630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47910.1	4.3e-88	65.61	chlororespiratory reduction 6	[more]
AT2G47910.2	9.5e-80	76.67	chlororespiratory reduction 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014946	Protein chlororespiratory reduction 6	PFAM	PF08847	Crr6	coord: 92..245 e-value: 1.8E-59 score: 199.7
IPR014946	Protein chlororespiratory reduction 6	PANTHER	PTHR35724	PROTEIN CHLORORESPIRATORY REDUCTION 6, CHLOROPLASTIC	coord: 4..252
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G010630.1	Lsi06G010630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010275	NAD(P)H dehydrogenase complex assembly
cellular_component	GO:0009507	chloroplast