Lsi06G010060 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAAATAGGGACTTTGGCGGAGTTGGGAAAGAGAGAAATCAAAACAGAAGTAGAATAGAACTGTAGAACTTTGAAAGTGACTTTTGGCAGAGAGAAACGGAGCCGAAAAGAGGAGAACCAAGGAACGAGACGAGTTTCTTCGCCATTTACGAAGCTCTCCGTAATGCTCTCTCTCTGTTTCTCTTTCAATTTCCTTCAGTAACAATTCTGACGATTACAATTTCTGAATAACCATGTCTTGGTTGTTCAAGTCTCTCCAAGCGACCGATGATGATATCTCAGCCGAATCGCAGTTTAACGGTTCATCTTCGTCGTCGGAATGCGTTCGTTTCACCACCGTTGATCCTTCTGTTAAAGACGATTTCTCCGCACTCGGTGAGACGCTGAGCCGCCAGCTACGCGGCTTCGCCAACTTTCTCGCTCCACAACCGTCGTCGGCGGTCGTTTCTGTCGCCGATTCTTCCAATTCGAGTTCGAATTCTTCGTCGCCGTCTCAAACGCTTCAAGGAATTCGTAATGATCTCGCAGAGATTGGCTGTGGCTTGAGAAACGGCTTCTCGATGCTCTCTGTTAATAGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTTCTAACTTGCTGCCGTTTCGGAGACGTTCTGCCGATGATGATGAAGAAGAAGACGAATTCGAAGACGAGGTTATTGATGATACGCCGGGAATTACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTCGCGGCCAGAGTACTGGATGGATTTTCCTTTGGCGCTCGATGAAACAGGTAAATCCAAAATCTCTTGTCAGTGTTTAATCACTGACCAGTGAATTTGGCATAAATAGAGATTAGGATAAGAACATTGCGCCTGCAAATTGTGTACTATTATATTAAACTAGAGGTGGTCATTAAGAGCAAATAGTATGCTCCTTTCTTTCTTTTTTTTCCTCCTCGTTCATCTGTTTTTTTTCCTCTTTTGTTTTTCCCTGGCTGAGAATTAATTCATATTATTATGAAGCCTAATTTACCAACATAATTTTGTCAGATGCTGAAATCGATATAGTGTATGAGAGAGTGGGCATAATGAAAAATCTATATATCTCGCAAGTAGAGACTAGACATACATACTGCCTTGATCTATAAATCTAGATCAAGAAGTAAACCTAAGGAGGGAAAACAAAGCTATATTCTCCTTTCTCCATGTCTTTATCTGGTTATTCTCTTTTTAGAAAGAAGTAGCGAGGGGCATTGGTTACTTGTATTTGAGGAATATCTGTCGTCCAAGAACTCTTCCATCCTATTAATATTGTGTTTATTCAATTATATTTCTGACTATAACAATGATAACTTAGAAACTAACACTTTCGCCATATTTTTTTCTCTTGTTCAATATGGTGTCAACTGTCAAGTATGAGTACGACTTATGTAGTTCACTCATATGATAGACAATAAGCACTCATCTGAATTTGGATGTTTACATTTCAAGAATAGGTTGCTGAATGTATAAAACAATTACCAATGAAACTGATTTCGTCTACCATCTTCAATTGCTGGATGTATAGTAATTTCTAAGAGCTAGATGGGGCATCTTCCTACTCTGCTTACTCTATATTCTGTCATCTACTCCCCTCCATAACAAGGAGACGAGAATATTTGGAGAGCCTTTTGTAGAAAATACTAAAGAAAACTTTTAGATGGTATATAACCCCTTGATCTTTGAAGCTTTTACAGGAAGCACATGTACTTGTTTCCTTCAACTTGGTCATTTCACGGCCCTCGTTGTGGGACACAAGCTTTGTGTGCCATCCTCTTTGTTGCTTTTCCATTCTCATTTAATGTTTTCATATAGCCTGAGGACGTAGATATCTAATACCTCCCATATGGTTGAGCTTTCAATTAATTATAAATACATCGACTTTACTGAAGATACAACGCAGCCTTTATGTTAATTGGAATTGCTAATTGAGTTAGCAACAAAATCCATTGAATATTTCCAACTTTATGTCAATCACTGCAAGTTTTCTTTTGGTAGTGGTAATTATTGAGAAGTTATTTTTCGCATTTGGGCACTTTGTATGTGCGTCTATTATATTGATCAGTTTTCGATTATCATTCACTATTAGCATAATACTTTCATTAGCTTTATTGCAGATTTTGAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGTATTTCAACTCTTAAAATGAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTGTTGCTACCAAGATTCAATCAACCTGACTTTGAGCTTCTAGCAACCTCTGAAGTAAGACTTATTTCCCTTTTTAAATTACCATACTCTGCTTTTTTAGGTTGTTTGGAGTTTATTCTGAGTAGTGCTTGCTGTTGCATTAAATCCTAACTGAAATTGTTGAGAATTTTTTTAATCATAAATTGATTTTTGGAATTAGTCATGTTTGTAAGTATTTTGTTTTTTGTTTTTAAAAAAGTAAGCTTATTTCCCCTCAATTTCTTATAATGGTTTGCATTTTTTTTAAGTATAAAAGTTGAATTCTTAACCAAATTTGAAAAATAGAAACAAGTTTTTTTAGTTTTCAAAACTCGGCTTGGTTTTTTAAAACATTGATAAAAGTAGATAATGAGTCAAAAAATTTAGAGGTAGAAGAGGTGTATATAGGCTTAGTTTTTAAAAACTAAAAACAAAAAACGAAATAGTTACCCAACGGGTTTACATGATTACATTGGGGTTTTTCATAATTTTGGATCTTCTGCTGCTGAGACAGGAATCATCCTGTGTCTCTAAGTGTCTACCTTTCTATACCATATCTTGCAAGTTGGACGCCTTTACACATTTCTTGCTTTTATTTGCGTTCTGTATGTTTAATTTACTGTATTTCAAGTTCCTCGTCTGCTGTGCTGCTTACTATTAAAATAATAAAAACTTTTGTTTTCCTTTTCTTTCCTTCAATATCATGCTAGAATGGTACAATATTTTTTCCCATGCTAGATAAATGCTAAATATTTAATATAACTTTGATTCATTGCACTTGCATGTTATCTTCAGAATTGAATATTAGTATGTATGTCAACATCTATGTGATGGTGAGATCACCAGAACTAAAATCCACCCACATTTGAGAGAGAGAGAGATCATAATGATTAGCAAAATGGAATGATCCAAAAGAACTAACGGTTACATTCAGCTTTCAGTATGGTCGTTAAGAAAAATGAAACCCGACCATTTATTTAGGTTTATATTTAAATCTATCTTTAAAAACCAAAAAACTGAATAACGAATACAAAATTTAAAGATTAAAATCATTAAAATTTCAGTTTACTTAATGAACGACGTAGTTAAACTGAAAAAAATTATCCAGTTGGTTTCAAATCAAATTATACTTTTTGATGATTAAATTCAGTTGTAGTACATAAAATTGCCTAGAATGTAGGCTTAATCGATTTGGACAAAAACAATCCAAATTTAAGAGATGAACACCAGTCTACAGCACATGCTCCTGTAGTTGTTTCTGCAATCTGTGACGTGACTAATTGATTACATAGAATGATTAGGTTGGCTTTAGAAATCTATAGAGACCTCTTACATTACATCCATGGCCTTTAACTTAATTAGAGAAACAATCTTTAATTACATTAGTTCTGATTCTCTCCTGTTAGGAGCTTATGCCATATATTTTTTGAGCATGTATGAGAGATTTTGAAATTATCTTGAATCATTCAAATGTTAGGTTTTGCACTTTTAAATACAAGATCAAAATTAAAATTTATAGGATTAAAGGCATTATTTGGATTGATTTTAAACATGATGACAGCGATTTCACCCATTTCAAAATCACTTCTCAGACATGCCCTTTAATCCCTCTGTCGCATATTTATTTGAGGCTTTCAGGCAAACTCAAATTCCCACGATGCACATCTTTATTCAGATGCATTTGACTTAAAGTTTCAGATTATTAATGTAACTGTCTTGATTCTTTTTGGGTAGATTGTCGAAGCAAGAAATATACTTCTGGATAAAGTCCAAAGAAAAGAGAAACCACAGTTGAATTCTGAGGATACTTGTGAAAACAATTTGGCGTCTGAGGAAAAGCCAAATTGCACTCAAATCAGTGAAGGAGGTGAAGGATTGGAAACTGGGAATGAAGATGGAGAGAATACCAATCAACGGTCGGAAAAGGCATATTCAGAAACTTGTATAGATGCCAAAAAAGGGGTAAGGCTTGAAGGTGTCGCATTCAGTGATATAGAGGATGATGGGAGCGATTTGTCTGGAAAATTTTCAGTAATCGAGTCTAGTGATTGGGTTCAGCTGAATGAGGATCAGCAGAAAACATGGGAGCAGGACAGAGATTCAGAAGGTGAGGATTCAAGTGATTGGTTTGATGTGGATGAATTTGATTAAGAAAGGTTAAATTTTAATCTTTTTTCTTTTTCCCTAAAATGTTTTCGAGTAAAAGAAAACCTTGATTTTCTTTTTGGTAGAGAGGCCACAAGGCTTTTAGGTTTTAATTTATCTTCCCTTTGGTTATTTTTATAGCATAAATTTGGTGCATATGTTTTCCTCGTAAGGTATTGGGGTTCTAGTAGAATTTAACACATTGTTATTCCCCCAATTGAACGTCCAATAATCTTAATCAGGTTTCTCTGAGTGGGATCGACCAATTA AAGAAATAGGGACTTTGGCGGAGTTGGGAAAGAGAGAAATCAAAACAGAAGTAGAATAGAACTGTAGAACTTTGAAAGTGACTTTTGGCAGAGAGAAACGGAGCCGAAAAGAGGAGAACCAAGGAACGAGACGAGTTTCTTCGCCATTTACGAAGCTCTCCGTAATGCTCTCTCTCTGTTTCTCTTTCAATTTCCTTCAGTAACAATTCTGACGATTACAATTTCTGAATAACCATGTCTTGGTTGTTCAAGTCTCTCCAAGCGACCGATGATGATATCTCAGCCGAATCGCAGTTTAACGGTTCATCTTCGTCGTCGGAATGCGTTCGTTTCACCACCGTTGATCCTTCTGTTAAAGACGATTTCTCCGCACTCGGTGAGACGCTGAGCCGCCAGCTACGCGGCTTCGCCAACTTTCTCGCTCCACAACCGTCGTCGGCGGTCGTTTCTGTCGCCGATTCTTCCAATTCGAGTTCGAATTCTTCGTCGCCGTCTCAAACGCTTCAAGGAATTCGTAATGATCTCGCAGAGATTGGCTGTGGCTTGAGAAACGGCTTCTCGATGCTCTCTGTTAATAGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTTCTAACTTGCTGCCGTTTCGGAGACGTTCTGCCGATGATGATGAAGAAGAAGACGAATTCGAAGACGAGGTTATTGATGATACGCCGGGAATTACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTCGCGGCCAGAGTACTGGATGGATTTTCCTTTGGCGCTCGATGAAACAGATTTTGAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGTATTTCAACTCTTAAAATGAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTGTTGCTACCAAGATTCAATCAACCTGACTTTGAGCTTCTAGCAACCTCTGAAATTGTCGAAGCAAGAAATATACTTCTGGATAAAGTCCAAAGAAAAGAGAAACCACAGTTGAATTCTGAGGATACTTGTGAAAACAATTTGGCGTCTGAGGAAAAGCCAAATTGCACTCAAATCAGTGAAGGAGGTGAAGGATTGGAAACTGGGAATGAAGATGGAGAGAATACCAATCAACGGTCGGAAAAGGCATATTCAGAAACTTGTATAGATGCCAAAAAAGGGGTAAGGCTTGAAGGTGTCGCATTCAGTGATATAGAGGATGATGGGAGCGATTTGTCTGGAAAATTTTCAGTAATCGAGTCTAGTGATTGGGTTCAGCTGAATGAGGATCAGCAGAAAACATGGGAGCAGGACAGAGATTCAGAAGGTGAGGATTCAAGTGATTGGTTTGATGTGGATGAATTTGATTAAGAAAGGTTAAATTTTAATCTTTTTTCTTTTTCCCTAAAATGTTTTCGAGTAAAAGAAAACCTTGATTTTCTTTTTGGTAGAGAGGCCACAAGGCTTTTAGGTTTTAATTTATCTTCCCTTTGGTTATTTTTATAGCATAAATTTGGTGCATATGTTTTCCTCGTAAGGTATTGGGGTTCTAGTAGAATTTAACACATTGTTATTCCCCCAATTGAACGTCCAATAATCTTAATCAGGTTTCTCTGAGTGGGATCGACCAATTA ATGTCTTGGTTGTTCAAGTCTCTCCAAGCGACCGATGATGATATCTCAGCCGAATCGCAGTTTAACGGTTCATCTTCGTCGTCGGAATGCGTTCGTTTCACCACCGTTGATCCTTCTGTTAAAGACGATTTCTCCGCACTCGGTGAGACGCTGAGCCGCCAGCTACGCGGCTTCGCCAACTTTCTCGCTCCACAACCGTCGTCGGCGGTCGTTTCTGTCGCCGATTCTTCCAATTCGAGTTCGAATTCTTCGTCGCCGTCTCAAACGCTTCAAGGAATTCGTAATGATCTCGCAGAGATTGGCTGTGGCTTGAGAAACGGCTTCTCGATGCTCTCTGTTAATAGCAACAAGGCTGTTGGAGAGATTTCCAGGTTTGCTTCTAACTTGCTGCCGTTTCGGAGACGTTCTGCCGATGATGATGAAGAAGAAGACGAATTCGAAGACGAGGTTATTGATGATACGCCGGGAATTACGAATGAGGTTCTAAATTTTGTGAACGATATTTCTTCGCGGCCAGAGTACTGGATGGATTTTCCTTTGGCGCTCGATGAAACAGATTTTGAAATGTCTGACGTTCAAAGAATGCACATTTCAACTGTTGAGCAATTGGTTCCAAGTATTTCAACTCTTAAAATGAAGCTTCAGAGTTTCATGAGCAATGAAATATTCTGGATGATTTATTTTATACTGTTGCTACCAAGATTCAATCAACCTGACTTTGAGCTTCTAGCAACCTCTGAAATTGTCGAAGCAAGAAATATACTTCTGGATAAAGTCCAAAGAAAAGAGAAACCACAGTTGAATTCTGAGGATACTTGTGAAAACAATTTGGCGTCTGAGGAAAAGCCAAATTGCACTCAAATCAGTGAAGGAGGTGAAGGATTGGAAACTGGGAATGAAGATGGAGAGAATACCAATCAACGGTCGGAAAAGGCATATTCAGAAACTTGTATAGATGCCAAAAAAGGGGTAAGGCTTGAAGGTGTCGCATTCAGTGATATAGAGGATGATGGGAGCGATTTGTCTGGAAAATTTTCAGTAATCGAGTCTAGTGATTGGGTTCAGCTGAATGAGGATCAGCAGAAAACATGGGAGCAGGACAGAGATTCAGAAGGTGAGGATTCAAGTGATTGGTTTGATGTGGATGAATTTGATTAA MSWLFKSLQATDDDISAESQFNGSSSSSECVRFTTVDPSVKDDFSALGETLSRQLRGFANFLAPQPSSAVVSVADSSNSSSNSSSPSQTLQGIRNDLAEIGCGLRNGFSMLSVNSNKAVGEISRFASNLLPFRRRSADDDEEEDEFEDEVIDDTPGITNEVLNFVNDISSRPEYWMDFPLALDETDFEMSDVQRMHISTVEQLVPSISTLKMKLQSFMSNEIFWMIYFILLLPRFNQPDFELLATSEIVEARNILLDKVQRKEKPQLNSEDTCENNLASEEKPNCTQISEGGEGLETGNEDGENTNQRSEKAYSETCIDAKKGVRLEGVAFSDIEDDGSDLSGKFSVIESSDWVQLNEDQQKTWEQDRDSEGEDSSDWFDVDEFD Homology
BLAST of Lsi06G010060 vs. ExPASy TrEMBL
Match: A0A6J1JB79 (uncharacterized protein LOC111485208 OS=Cucurbita maxima OX=3661 GN=LOC111485208 PE=4 SV=1) HSP 1 Score: 539.7 bits (1389), Expect = 1.0e-149 Identity = 305/404 (75.50%), Postives = 342/404 (84.65%), Query Frame = 0
BLAST of Lsi06G010060 vs. ExPASy TrEMBL
Match: A0A6J1H9V9 (uncharacterized protein LOC111461455 OS=Cucurbita moschata OX=3662 GN=LOC111461455 PE=4 SV=1) HSP 1 Score: 530.8 bits (1366), Expect = 4.8e-147 Identity = 301/402 (74.88%), Postives = 335/402 (83.33%), Query Frame = 0
BLAST of Lsi06G010060 vs. ExPASy TrEMBL
Match: A0A5A7U937 (Putative BSD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G001300 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 2.5e-140 Identity = 301/407 (73.96%), Postives = 322/407 (79.12%), Query Frame = 0
BLAST of Lsi06G010060 vs. ExPASy TrEMBL
Match: A0A5D3C7N5 (Putative BSD domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00610 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 3.3e-140 Identity = 301/405 (74.32%), Postives = 321/405 (79.26%), Query Frame = 0
BLAST of Lsi06G010060 vs. ExPASy TrEMBL
Match: A0A1S3B971 (uncharacterized protein LOC103487415 OS=Cucumis melo OX=3656 GN=LOC103487415 PE=4 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 9.6e-140 Identity = 300/407 (73.71%), Postives = 321/407 (78.87%), Query Frame = 0
BLAST of Lsi06G010060 vs. NCBI nr
Match: XP_023516908.1 (uncharacterized protein LOC111780673 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 548.1 bits (1411), Expect = 6.0e-152 Identity = 306/402 (76.12%), Postives = 342/402 (85.07%), Query Frame = 0
BLAST of Lsi06G010060 vs. NCBI nr
Match: XP_022987752.1 (uncharacterized protein LOC111485208 [Cucurbita maxima]) HSP 1 Score: 539.7 bits (1389), Expect = 2.1e-149 Identity = 305/404 (75.50%), Postives = 342/404 (84.65%), Query Frame = 0
BLAST of Lsi06G010060 vs. NCBI nr
Match: XP_038880537.1 (uncharacterized protein LOC120072199 [Benincasa hispida] >XP_038880538.1 uncharacterized protein LOC120072199 [Benincasa hispida]) HSP 1 Score: 532.7 bits (1371), Expect = 2.6e-147 Identity = 307/400 (76.75%), Postives = 331/400 (82.75%), Query Frame = 0
BLAST of Lsi06G010060 vs. NCBI nr
Match: XP_022960748.1 (uncharacterized protein LOC111461455 [Cucurbita moschata]) HSP 1 Score: 530.8 bits (1366), Expect = 9.8e-147 Identity = 301/402 (74.88%), Postives = 335/402 (83.33%), Query Frame = 0
BLAST of Lsi06G010060 vs. NCBI nr
Match: KAG6589824.1 (hypothetical protein SDJN03_15247, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023494.1 hypothetical protein SDJN02_14520 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 530.4 bits (1365), Expect = 1.3e-146 Identity = 301/404 (74.50%), Postives = 336/404 (83.17%), Query Frame = 0
BLAST of Lsi06G010060 vs. TAIR 10
Match: AT2G10950.1 (BSD domain-containing protein ) HSP 1 Score: 158.3 bits (399), Expect = 1.2e-38 Identity = 144/396 (36.36%), Postives = 195/396 (49.24%), Query Frame = 0
BLAST of Lsi06G010060 vs. TAIR 10
Match: AT5G65910.1 (BSD domain-containing protein ) HSP 1 Score: 126.3 bits (316), Expect = 5.2e-29 Identity = 133/464 (28.66%), Postives = 212/464 (45.69%), Query Frame = 0
BLAST of Lsi06G010060 vs. TAIR 10
Match: AT1G10720.1 (BSD domain-containing protein ) HSP 1 Score: 119.0 bits (297), Expect = 8.3e-27 Identity = 91/247 (36.84%), Postives = 131/247 (53.04%), Query Frame = 0
BLAST of Lsi06G010060 vs. TAIR 10
Match: AT3G49800.1 (BSD domain-containing protein ) HSP 1 Score: 117.1 bits (292), Expect = 3.2e-26 Identity = 107/347 (30.84%), Postives = 167/347 (48.13%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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