Lsi06G009840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G009840
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Phytocyanin domain-containing protein
Location	chr06: 19861780 .. 19863544 (+)
RNA-Seq Expression	Lsi06G009840
Synteny	Lsi06G009840

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAGGTTAGCCACAAAGCCTTTCTCTTGTTCTCAAAGCCAACAATATTATATATAGAGAATCCATTGAGGCCCTTCATGAGCTATATTGTTTGCGTTTTCCACAGAAACGATGAGAATTGGAATAGCTTTTCTGGTGGCGGTGGTGGCGACCACCGTGCTTCATGCGGCAGAGGCGGCGGTGATTCAGGTCGGAGGTGACAGTGGCTGGCAGCGTCCTCCTAATACCGACTTCTATTCCTCTTGGGCCGCGGCTCTAAATTTCACCGTCGGAGATGTCTTAGGTTTGATTTTTTACTTCTTTGCTCTTCAAATCTTCATTAATTCATTTAGATGAAAATGAAAAGTCTTATGTTAGATGGTTGAACAAAAAAAAAAAACCAATTTTCATCTTTATTATAATTTTGCTTTGTTACATATATATATATATGGGTATATTATACTTTGTCACGTTCAAACTCCAATTTAACTAATTATTATAACTCACTTAATCCCAGTAAACCTATTTAAAAATCTTCATTGTCTATTGTATTTACTATTTTGCAACTATCACTTCTCATTTGTAAACTAAATTTAAATAGTCTATACCTCAAACACAGACTATTATAACTCACATATTATTAACCTACAAACTATAATAACGCTACAAACATTTCCTTAATCTCTCAATCGATAACTATAGAACTAAAGAAATATAGATGACAAAATAATAATAATAATAAGGACACAAACTATTGTGTTTTTTTTTTCTTGTTCCTATTTACTTAAAATTTCAAATACTAAATTTATAATAAATATCCTAAAAGTTTCTTTTTCCTTTTCAGTAAAACAAAACATATAGAATTGACCATTAAAATTTTTGACATCTTAAGAATATAATATATGCTAATTAAGATATTCATAATGATAAACTTAATTTTTAGTTCTAAGTTTCCATTTTTATGTCTAAATTTTTTAGAATTTTAAAATGTTTACTTTTATTTTGGTTGCAGTATTCAACTTTCCGACGGGAGGTCACGACGTGGCCGGAGTGACAAAAGTCGGTTACGACAACTGTAACACCACCAATCCTAAATTCTTAAATGCCACATCTCCTTTTTCTTTCACTCTCGATACACTCGACGATTTCTTTTTCATCTGCACCGTCCCCGACCACTGCTCCGCCGGCCAGAAATTGGCCATCACAAACCTCCAACAATCGCCGCCACCTGGCTCCCCCAATTCTCCCCCCGTTTCCGGTAACGAGCCGCCACCACCTGGCTCCCCTGATTCTCCACCCGTTTCGGGTGCAATGCCACCGCCCGTCATTACTGCTCCGCCGCCGCCAAACTCCGTCACTAGTATCATGGCCTCCATATTCACTGTTGCCTTCGTCTCCATCGCTGTCACTTTAATAATATATTAATCACTCATCGGGTTCCACTTTTTTTTTTTAAATTATTATTATTAATAATGTTTGGTAATTACATGATTGGATTATTGAAAAAAGTTGACGGGGTTTTGTCAACGGCGCTATTTACAGTATTGTATTGAGATTTTTTTTAATATTTAATTATGGTTTTGTTTTTGCTTATGTCATTTGAATATAGTTATTCAACTCTCTTCATAAAAAAATAAAAACTCTAATTGTTCAACCTATTTTAGAAAAAGAATATGAGACTGCTGCAATGTTAGATAATTAATTATTAGATATATGGATAAAAAATTGTAAAAGTATTCAATGATTATTAAAAGGCATCTTGGTGAATAAAATGTAAGTTTCTAG

mRNA sequence

CAAAAGGTTAGCCACAAAGCCTTTCTCTTGTTCTCAAAGCCAACAATATTATATATAGAGAATCCATTGAGGCCCTTCATGAGCTATATTGTTTGCGTTTTCCACAGAAACGATGAGAATTGGAATAGCTTTTCTGGTGGCGGTGGTGGCGACCACCGTGCTTCATGCGGCAGAGGCGGCGGTGATTCAGGTCGGAGGTGACAGTGGCTGGCAGCGTCCTCCTAATACCGACTTCTATTCCTCTTGGGCCGCGGCTCTAAATTTCACCGTCGGAGATGTCTTAGTATTCAACTTTCCGACGGGAGGTCACGACGTGGCCGGAGTGACAAAAGTCGGTTACGACAACTGTAACACCACCAATCCTAAATTCTTAAATGCCACATCTCCTTTTTCTTTCACTCTCGATACACTCGACGATTTCTTTTTCATCTGCACCGTCCCCGACCACTGCTCCGCCGGCCAGAAATTGGCCATCACAAACCTCCAACAATCGCCGCCACCTGGCTCCCCCAATTCTCCCCCCGTTTCCGGTAACGAGCCGCCACCACCTGGCTCCCCTGATTCTCCACCCGTTTCGGGTGCAATGCCACCGCCCGTCATTACTGCTCCGCCGCCGCCAAACTCCGTCACTAGTATCATGGCCTCCATATTCACTGTTGCCTTCGTCTCCATCGCTGTCACTTTAATAATATATTAATCACTCATCGGGTTCCACTTTTTTTTTTTAAATTATTATTATTAATAATGTTTGGTAATTACATGATTGGATTATTGAAAAAAGTTGACGGGGTTTTGTCAACGGCGCTATTTACAGTATTGTATTGAGATTTTTTTTAATATTTAATTATGGTTTTGTTTTTGCTTATGTCATTTGAATATAGTTATTCAACTCTCTTCATAAAAAAATAAAAACTCTAATTGTTCAACCTATTTTAGAAAAAGAATATGAGACTGCTGCAATGTTAGATAATTAATTATTAGATATATGGATAAAAAATTGTAAAAGTATTCAATGATTATTAAAAGGCATCTTGGTGAATAAAATGTAAGTTTCTAG

Coding sequence (CDS)

ATGAGAATTGGAATAGCTTTTCTGGTGGCGGTGGTGGCGACCACCGTGCTTCATGCGGCAGAGGCGGCGGTGATTCAGGTCGGAGGTGACAGTGGCTGGCAGCGTCCTCCTAATACCGACTTCTATTCCTCTTGGGCCGCGGCTCTAAATTTCACCGTCGGAGATGTCTTAGTATTCAACTTTCCGACGGGAGGTCACGACGTGGCCGGAGTGACAAAAGTCGGTTACGACAACTGTAACACCACCAATCCTAAATTCTTAAATGCCACATCTCCTTTTTCTTTCACTCTCGATACACTCGACGATTTCTTTTTCATCTGCACCGTCCCCGACCACTGCTCCGCCGGCCAGAAATTGGCCATCACAAACCTCCAACAATCGCCGCCACCTGGCTCCCCCAATTCTCCCCCCGTTTCCGGTAACGAGCCGCCACCACCTGGCTCCCCTGATTCTCCACCCGTTTCGGGTGCAATGCCACCGCCCGTCATTACTGCTCCGCCGCCGCCAAACTCCGTCACTAGTATCATGGCCTCCATATTCACTGTTGCCTTCGTCTCCATCGCTGTCACTTTAATAATATATTAA

Protein sequence

MRIGIAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAITNLQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASIFTVAFVSIAVTLIIY

Homology

[Close]

BLAST of Lsi06G009840 vs. ExPASy Swiss-Prot
Match: P42849 (Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-19
Identity = 47/95 (49.47%), Postives = 56/95 (58.95%), Query Frame = 0


Query: 27  VGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTGGHDVAGVTKVGYDNCNTTNPKF 86
           VGGD  W+RP +  FY +WA    F VGD L F+F  G HDVA VTK  +DNC   NP  
Sbjct: 5   VGGDMEWKRPSDPKFYITWATGKTFRVGDELEFDFAAGMHDVAVVTKDAFDNCKKENPIS 64

Query: 87  LNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAI 122
              T P    L+T    ++ICTV DHC  GQKL+I
Sbjct: 65  HMTTPPVKIMLNTTGPQYYICTVGDHCRVGQKLSI 99

[Close]

BLAST of Lsi06G009840 vs. ExPASy Swiss-Prot
Match: Q07488 (Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2)

HSP 1 Score: 96.7 bits (239), Expect = 3.1e-19
Identity = 73/199 (36.68%), Postives = 96/199 (48.24%), Query Frame = 0


Query: 5   IAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTG 64
           + FLV V A  V+ A +     VG D+ W RP + +FY++WA    F VGD L F+F  G
Sbjct: 8   VTFLVLVFAAVVVFAED---YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAG 67

Query: 65  GHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAIT-- 124
            HDVA V++  ++NC    P       P    L+T    +FICTV DHC  GQKL+IT  
Sbjct: 68  RHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 127

Query: 125 ----------NLQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSV 184
                         +P PGS  +P   G  PP  G   +P  S        T  P  N+ 
Sbjct: 128 AAGATGGATPGAGATPAPGS--TPSTGGTTPPTAGGTTTPSGSSG------TTTPAGNAA 187

Query: 185 TSIMASIFTVAFVSIAVTL 192
           +S+  + F VAFVS  V L
Sbjct: 188 SSLGGATFLVAFVSAVVAL 195

[Close]

BLAST of Lsi06G009840 vs. ExPASy Swiss-Prot
Match: P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)

HSP 1 Score: 89.4 bits (220), Expect = 5.0e-17
Identity = 61/138 (44.20%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 21  EAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTGGHDVAGV-TKVGYDNC 80
           ++ V  VG ++GW  P + +FYS WAA   F VGD L FNFP   H+V  + TK  +D C
Sbjct: 1   QSTVHIVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC 60

Query: 81  NTTN-PKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAI----TNLQQSPPPGSPN 140
           N  N    +  TSP    LD L   +F+CTV  HCS GQKL+I     N   S PP  P+
Sbjct: 61  NFVNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMPP--PS 120

Query: 141 SPPVSGNEPPPPGSPDSP 153
           S P S   PPP   P SP
Sbjct: 121 SSPPSSVMPPPVMPPPSP 136

[Close]

BLAST of Lsi06G009840 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 9.1e-11
Identity = 60/168 (35.71%), Postives = 79/168 (47.02%), Query Frame = 0


Query: 5   IAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTG 64
           + FL AV A        AA  +VG  SGW    N D Y+ W     F VGD L F +   
Sbjct: 10  LLFLAAVPAVF------AATFKVGDISGW--TSNLD-YTVWLTGKTFRVGDTLEFVYGL- 69

Query: 65  GHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAITNL 124
            H V+ V K GYDNC+++      A       L T+    F+C    HC  G KLA+  L
Sbjct: 70  SHSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVL 129

Query: 125 QQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSV 173
             +P P +P+SPP + + P  P S  S P S   PP   +   PP+S+
Sbjct: 130 AAAPSPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPSSL 167

[Close]

BLAST of Lsi06G009840 vs. ExPASy Swiss-Prot
Match: O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-10
Identity = 59/174 (33.91%), Postives = 83/174 (47.70%), Query Frame = 0


Query: 8   LVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTGGHD 67
           +++V+ATT++    A    +GG SGW    +     +WAA   F VGD LVF++P   HD
Sbjct: 9   IISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFSYPAAFHD 68

Query: 68  VAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKL---AITNL 127
           V  VTK  +D+C    P    A       L T    +FIC +P HCS G KL    +   
Sbjct: 69  VVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVPTA 128

Query: 128 QQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMAS 179
             +P    PN+ P S N P P       P+    P PV++    P+S T + +S
Sbjct: 129 TVAPTAPLPNTVP-SLNAPSPSSVLPIQPLLPLNPVPVLS----PSSSTPLPSS 174

[Close]

BLAST of Lsi06G009840 vs. ExPASy TrEMBL
Match: A0A0A0LU53 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348430 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.9e-73
Identity = 153/196 (78.06%), Postives = 166/196 (84.69%), Query Frame = 0


Query: 3   IGIAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFP 62
           +GI F+VA+VATTVL AAEA VI VGGDSGW RPPN+DFYSSWAA L FTVGD+LVFNF 
Sbjct: 4   VGIVFVVALVATTVLQAAEAVVIPVGGDSGWIRPPNSDFYSSWAAGLKFTVGDILVFNFM 63

Query: 63  TGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAIT 122
            G HDVAGVTK GYDNC TT+P FLN TSPFSFTLD LDD+FFICT+P HCSAGQKLAIT
Sbjct: 64  AGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDYFFICTIPGHCSAGQKLAIT 123

Query: 123 NLQQSPPPGSPNSPPVSGNE--PPPPGSPDSPPVSGAMPP--PVITAPPPPNSVTSIMAS 182
           NLQQSPPP SP++PPV GNE  P PP SPDSPP+S  MPP  PVI APPPPNS TSI+ S
Sbjct: 124 NLQQSPPPTSPSTPPVPGNEPTPTPPASPDSPPISNEMPPPVPVIAAPPPPNSATSIVGS 183

Query: 183 IFTVAFVSIAVTLIIY 195
           IFTVAFVSIAV+ IIY
Sbjct: 184 IFTVAFVSIAVSFIIY 199

[Close]

BLAST of Lsi06G009840 vs. ExPASy TrEMBL
Match: A0A5D3C3K6 (Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001070 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.7e-73
Identity = 153/194 (78.87%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 3   IGIAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFP 62
           +GI ++VA+VA TVL AAEA VI VGGDSGW RPPN +FYSSWAA LNF VGD+LVFNF 
Sbjct: 4   VGIVYVVALVAITVLQAAEAVVIPVGGDSGWIRPPNPNFYSSWAAGLNFIVGDILVFNFA 63

Query: 63  TGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAIT 122
           TGGHDVAGVTK GYDNCNT NP FLN TSPFSFTLD L+DFFFICT+P HCSAGQKLAIT
Sbjct: 64  TGGHDVAGVTKDGYDNCNTNNPIFLNTTSPFSFTLDKLEDFFFICTIPGHCSAGQKLAIT 123

Query: 123 NLQQSPPPGSPNSPPVSGNEPP--PPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASIF 182
           NLQQSPPP SPNSPPVSGNEPP  PP SP+SPPVS  M       PPPPNS TSIMASIF
Sbjct: 124 NLQQSPPPTSPNSPPVSGNEPPPTPPASPNSPPVSSEM-------PPPPNSATSIMASIF 183

Query: 183 TVAFVSIAVTLIIY 195
           TVAFVSIAV+ IIY
Sbjct: 184 TVAFVSIAVSFIIY 190

[Close]

BLAST of Lsi06G009840 vs. ExPASy TrEMBL
Match: A0A1S3BA42 (umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487434 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 6.7e-73
Identity = 153/194 (78.87%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 3   IGIAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFP 62
           +GI ++VA+VA TVL AAEA VI VGGDSGW RPPN +FYSSWAA LNF VGD+LVFNF 
Sbjct: 4   VGIVYVVALVAITVLQAAEAVVIPVGGDSGWIRPPNPNFYSSWAAGLNFIVGDILVFNFA 63

Query: 63  TGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAIT 122
           TGGHDVAGVTK GYDNCNT NP FLN TSPFSFTLD L+DFFFICT+P HCSAGQKLAIT
Sbjct: 64  TGGHDVAGVTKDGYDNCNTNNPIFLNTTSPFSFTLDKLEDFFFICTIPGHCSAGQKLAIT 123

Query: 123 NLQQSPPPGSPNSPPVSGNEPP--PPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASIF 182
           NLQQSPPP SPNSPPVSGNEPP  PP SP+SPPVS  M       PPPPNS TSIMASIF
Sbjct: 124 NLQQSPPPTSPNSPPVSGNEPPPTPPASPNSPPVSSEM-------PPPPNSATSIMASIF 183

Query: 183 TVAFVSIAVTLIIY 195
           TVAFVSIAV+ IIY
Sbjct: 184 TVAFVSIAVSFIIY 190

[Close]

BLAST of Lsi06G009840 vs. ExPASy TrEMBL
Match: A0A1S3BA83 (umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487498 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 2.6e-48
Identity = 124/195 (63.59%), Postives = 137/195 (70.26%), Query Frame = 0


Query: 1   MRIGIAFLV-AVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVF 60
           MRIGI FLV AV ATTVLH  EA  I +GG SGW RP + ++YS+W   L FTVGDVLVF
Sbjct: 10  MRIGIVFLVAAVAATTVLHTGEALEIFIGGTSGWLRPNDPNWYSNW-EDLKFTVGDVLVF 69

Query: 61  NFPTGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKL 120
           NF    H+VAGVTK GYDNC+T N KF+N TSPF FT+ TLDD FFICTVP HCSAGQK+
Sbjct: 70  NF-LMDHNVAGVTKEGYDNCDTNNLKFINTTSPFLFTIKTLDDLFFICTVPGHCSAGQKI 129

Query: 121 AITNLQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASI 180
           AITN+QQS                  P SPDS        P V+TAPPPPNSV SIMASI
Sbjct: 130 AITNIQQS---------------SSTPSSPDS--------PTVVTAPPPPNSVASIMASI 179

Query: 181 FTVAFVSIAVTLIIY 195
           FTVAFVS+AV LIIY
Sbjct: 190 FTVAFVSMAVMLIIY 179

[Close]

BLAST of Lsi06G009840 vs. ExPASy TrEMBL
Match: A0A5D3C5I5 (Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001090 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.1e-46
Identity = 121/193 (62.69%), Postives = 134/193 (69.43%), Query Frame = 0


Query: 1   MRIGIAFLV-AVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVF 60
           MRIGI FLV AV ATTVLH  EA  I +GG SGW RP + ++YS+W   L FTVGDVLVF
Sbjct: 1   MRIGIVFLVAAVAATTVLHTGEALEIFIGGTSGWLRPNDPNWYSNW-EDLKFTVGDVLVF 60

Query: 61  NFPTGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKL 120
           NF    H+VAGVTK GYDNC+T N KF+N TSPF FT+ TLDD FFICTVP HCSAGQK+
Sbjct: 61  NF-LMDHNVAGVTKEGYDNCDTNNLKFINTTSPFLFTIKTLDDLFFICTVPGHCSAGQKI 120

Query: 121 AITNLQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASI 180
           AITN+QQS                  P SPDS        P V+TAPPPPNSV SIMASI
Sbjct: 121 AITNIQQS---------------SSTPSSPDS--------PTVVTAPPPPNSVASIMASI 168

Query: 181 FTVAFVSIAVTLI 193
           FTVAFVS+AV  I
Sbjct: 181 FTVAFVSMAVMCI 168

[Close]

BLAST of Lsi06G009840 vs. NCBI nr
Match: XP_004150037.1 (cucumber peeling cupredoxin-like [Cucumis sativus] >KGN65338.1 hypothetical protein Csa_020086 [Cucumis sativus])

HSP 1 Score: 284.3 bits (726), Expect = 8.1e-73
Identity = 153/196 (78.06%), Postives = 166/196 (84.69%), Query Frame = 0


Query: 3   IGIAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFP 62
           +GI F+VA+VATTVL AAEA VI VGGDSGW RPPN+DFYSSWAA L FTVGD+LVFNF 
Sbjct: 4   VGIVFVVALVATTVLQAAEAVVIPVGGDSGWIRPPNSDFYSSWAAGLKFTVGDILVFNFM 63

Query: 63  TGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAIT 122
            G HDVAGVTK GYDNC TT+P FLN TSPFSFTLD LDD+FFICT+P HCSAGQKLAIT
Sbjct: 64  AGAHDVAGVTKEGYDNCITTDPIFLNTTSPFSFTLDKLDDYFFICTIPGHCSAGQKLAIT 123

Query: 123 NLQQSPPPGSPNSPPVSGNE--PPPPGSPDSPPVSGAMPP--PVITAPPPPNSVTSIMAS 182
           NLQQSPPP SP++PPV GNE  P PP SPDSPP+S  MPP  PVI APPPPNS TSI+ S
Sbjct: 124 NLQQSPPPTSPSTPPVPGNEPTPTPPASPDSPPISNEMPPPVPVIAAPPPPNSATSIVGS 183

Query: 183 IFTVAFVSIAVTLIIY 195
           IFTVAFVSIAV+ IIY
Sbjct: 184 IFTVAFVSIAVSFIIY 199

[Close]

BLAST of Lsi06G009840 vs. NCBI nr
Match: XP_008443977.1 (PREDICTED: umecyanin-like [Cucumis melo] >KAA0050151.1 umecyanin-like [Cucumis melo var. makuwa] >TYK06407.1 umecyanin-like [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 1.4e-72
Identity = 153/194 (78.87%), Postives = 163/194 (84.02%), Query Frame = 0


Query: 3   IGIAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFP 62
           +GI ++VA+VA TVL AAEA VI VGGDSGW RPPN +FYSSWAA LNF VGD+LVFNF 
Sbjct: 4   VGIVYVVALVAITVLQAAEAVVIPVGGDSGWIRPPNPNFYSSWAAGLNFIVGDILVFNFA 63

Query: 63  TGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAIT 122
           TGGHDVAGVTK GYDNCNT NP FLN TSPFSFTLD L+DFFFICT+P HCSAGQKLAIT
Sbjct: 64  TGGHDVAGVTKDGYDNCNTNNPIFLNTTSPFSFTLDKLEDFFFICTIPGHCSAGQKLAIT 123

Query: 123 NLQQSPPPGSPNSPPVSGNEPP--PPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASIF 182
           NLQQSPPP SPNSPPVSGNEPP  PP SP+SPPVS  M       PPPPNS TSIMASIF
Sbjct: 124 NLQQSPPPTSPNSPPVSGNEPPPTPPASPNSPPVSSEM-------PPPPNSATSIMASIF 183

Query: 183 TVAFVSIAVTLIIY 195
           TVAFVSIAV+ IIY
Sbjct: 184 TVAFVSIAVSFIIY 190

[Close]

BLAST of Lsi06G009840 vs. NCBI nr
Match: XP_038878561.1 (umecyanin-like [Benincasa hispida])

HSP 1 Score: 275.4 bits (703), Expect = 3.8e-70
Identity = 150/194 (77.32%), Postives = 158/194 (81.44%), Query Frame = 0


Query: 1   MRIGIAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFN 60
           MRIGI FLV VVATTV H AEA  I VGGD GW RP + DFYS WAA LNFTVGDVLVF+
Sbjct: 1   MRIGIVFLVTVVATTVRHVAEAIEIHVGGDGGWLRPSSPDFYSLWAAGLNFTVGDVLVFS 60

Query: 61  FPTGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLA 120
           F TG H+VAGVTK GYDNCNT+NPKFLN TSPFSFTL+TLDDF+FICTVP HCSAGQKLA
Sbjct: 61  FQTGAHNVAGVTKDGYDNCNTSNPKFLNTTSPFSFTLETLDDFYFICTVPGHCSAGQKLA 120

Query: 121 ITNLQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASIF 180
           ITN+QQSPPPGS  SP            PDSPPVSG MPPPV+TAPPPPNSVT  MASIF
Sbjct: 121 ITNVQQSPPPGS--SP------------PDSPPVSGEMPPPVVTAPPPPNSVTRTMASIF 180

Query: 181 TVAFVSIAVTLIIY 195
           TVA VSIAVTLIIY
Sbjct: 181 TVALVSIAVTLIIY 180

[Close]

BLAST of Lsi06G009840 vs. NCBI nr
Match: XP_008444048.1 (PREDICTED: umecyanin-like [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 5.3e-48
Identity = 124/195 (63.59%), Postives = 137/195 (70.26%), Query Frame = 0


Query: 1   MRIGIAFLV-AVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVF 60
           MRIGI FLV AV ATTVLH  EA  I +GG SGW RP + ++YS+W   L FTVGDVLVF
Sbjct: 10  MRIGIVFLVAAVAATTVLHTGEALEIFIGGTSGWLRPNDPNWYSNW-EDLKFTVGDVLVF 69

Query: 61  NFPTGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKL 120
           NF    H+VAGVTK GYDNC+T N KF+N TSPF FT+ TLDD FFICTVP HCSAGQK+
Sbjct: 70  NF-LMDHNVAGVTKEGYDNCDTNNLKFINTTSPFLFTIKTLDDLFFICTVPGHCSAGQKI 129

Query: 121 AITNLQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASI 180
           AITN+QQS                  P SPDS        P V+TAPPPPNSV SIMASI
Sbjct: 130 AITNIQQS---------------SSTPSSPDS--------PTVVTAPPPPNSVASIMASI 179

Query: 181 FTVAFVSIAVTLIIY 195
           FTVAFVS+AV LIIY
Sbjct: 190 FTVAFVSMAVMLIIY 179

[Close]

BLAST of Lsi06G009840 vs. NCBI nr
Match: KAA0050152.1 (uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK06408.1 uncharacterized protein E5676_scaffold163G001090 [Cucumis melo var. makuwa])

HSP 1 Score: 196.4 bits (498), Expect = 2.2e-46
Identity = 121/193 (62.69%), Postives = 134/193 (69.43%), Query Frame = 0


Query: 1   MRIGIAFLV-AVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVF 60
           MRIGI FLV AV ATTVLH  EA  I +GG SGW RP + ++YS+W   L FTVGDVLVF
Sbjct: 1   MRIGIVFLVAAVAATTVLHTGEALEIFIGGTSGWLRPNDPNWYSNW-EDLKFTVGDVLVF 60

Query: 61  NFPTGGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKL 120
           NF    H+VAGVTK GYDNC+T N KF+N TSPF FT+ TLDD FFICTVP HCSAGQK+
Sbjct: 61  NF-LMDHNVAGVTKEGYDNCDTNNLKFINTTSPFLFTIKTLDDLFFICTVPGHCSAGQKI 120

Query: 121 AITNLQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASI 180
           AITN+QQS                  P SPDS        P V+TAPPPPNSV SIMASI
Sbjct: 121 AITNIQQS---------------SSTPSSPDS--------PTVVTAPPPPNSVASIMASI 168

Query: 181 FTVAFVSIAVTLI 193
           FTVAFVS+AV  I
Sbjct: 181 FTVAFVSMAVMCI 168

[Close]

BLAST of Lsi06G009840 vs. TAIR 10
Match: AT5G20230.1 (blue-copper-binding protein )

HSP 1 Score: 96.7 bits (239), Expect = 2.2e-20
Identity = 73/199 (36.68%), Postives = 96/199 (48.24%), Query Frame = 0


Query: 5   IAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTG 64
           + FLV V A  V+ A +     VG D+ W RP + +FY++WA    F VGD L F+F  G
Sbjct: 8   VTFLVLVFAAVVVFAED---YDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAG 67

Query: 65  GHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAIT-- 124
            HDVA V++  ++NC    P       P    L+T    +FICTV DHC  GQKL+IT  
Sbjct: 68  RHDVAVVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVV 127

Query: 125 ----------NLQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSV 184
                         +P PGS  +P   G  PP  G   +P  S        T  P  N+ 
Sbjct: 128 AAGATGGATPGAGATPAPGS--TPSTGGTTPPTAGGTTTPSGSSG------TTTPAGNAA 187

Query: 185 TSIMASIFTVAFVSIAVTL 192
           +S+  + F VAFVS  V L
Sbjct: 188 SSLGGATFLVAFVSAVVAL 195

[Close]

BLAST of Lsi06G009840 vs. TAIR 10
Match: AT5G26330.1 (Cupredoxin superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 2.0e-13
Identity = 67/187 (35.83%), Postives = 94/187 (50.27%), Query Frame = 0


Query: 6   AFLVAVVATTV--LHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPT 65
           A +VA +A  V  L  +EAAV +VG  +GW    N D Y  WA+   F +GD ++F +  
Sbjct: 3   AIIVAALACIVVMLRLSEAAVYKVGDSAGWTTIANVD-YKLWASTKTFHIGDTVLFEYNP 62

Query: 66  GGHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAITN 125
             H+V  VT   Y +CNT+ P     T   S TL      FF C VP HC AGQKL +  
Sbjct: 63  QFHNVMRVTHPMYRSCNTSKPISTFTTGNDSITLTNHGHHFFFCGVPGHCLAGQKLDLHV 122

Query: 126 LQQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMASIFTVA 185
           L   P   +P S P + +   PP +  + P +G   P    A   P+ VT+ + ++ T+ 
Sbjct: 123 L--LPASSTPLSDPPTSSSSSPPST--TIPAAGVPGPSPSLAASLPSMVTAQIVAVVTL- 182

Query: 186 FVSIAVT 191
            VS+A T
Sbjct: 183 LVSLAFT 183

[Close]

BLAST of Lsi06G009840 vs. TAIR 10
Match: AT3G60280.1 (uclacyanin 3 )

HSP 1 Score: 68.6 bits (166), Expect = 6.5e-12
Identity = 60/168 (35.71%), Postives = 79/168 (47.02%), Query Frame = 0


Query: 5   IAFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTG 64
           + FL AV A        AA  +VG  SGW    N D Y+ W     F VGD L F +   
Sbjct: 10  LLFLAAVPAVF------AATFKVGDISGW--TSNLD-YTVWLTGKTFRVGDTLEFVYGL- 69

Query: 65  GHDVAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAITNL 124
            H V+ V K GYDNC+++      A       L T+    F+C    HC  G KLA+  L
Sbjct: 70  SHSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVL 129

Query: 125 QQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSV 173
             +P P +P+SPP + + P  P S  S P S   PP   +   PP+S+
Sbjct: 130 AAAPSPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPSLPPSSL 167

[Close]

BLAST of Lsi06G009840 vs. TAIR 10
Match: AT2G32300.1 (uclacyanin 1 )

HSP 1 Score: 68.2 bits (165), Expect = 8.5e-12
Identity = 59/174 (33.91%), Postives = 83/174 (47.70%), Query Frame = 0


Query: 8   LVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTGGHD 67
           +++V+ATT++    A    +GG SGW    +     +WAA   F VGD LVF++P   HD
Sbjct: 9   IISVLATTLIGLTVATDHTIGGPSGWTVGAS---LRTWAAGQTFAVGDNLVFSYPAAFHD 68

Query: 68  VAGVTKVGYDNCNTTNPKFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKL---AITNL 127
           V  VTK  +D+C    P    A       L T    +FIC +P HCS G KL    +   
Sbjct: 69  VVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVVPTA 128

Query: 128 QQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMPPPVITAPPPPNSVTSIMAS 179
             +P    PN+ P S N P P       P+    P PV++    P+S T + +S
Sbjct: 129 TVAPTAPLPNTVP-SLNAPSPSSVLPIQPLLPLNPVPVLS----PSSSTPLPSS 174

[Close]

BLAST of Lsi06G009840 vs. TAIR 10
Match: AT5G53870.1 (early nodulin-like protein 1 )

HSP 1 Score: 66.6 bits (161), Expect = 2.5e-11
Identity = 66/182 (36.26%), Postives = 81/182 (44.51%), Query Frame = 0


Query: 6   AFLVAVVATTVLHAAEAAVIQVGGDSGWQRPPNTDFYSSWAAALNFTVGDVLVFNFPTGG 65
           +FL+     T    A+A    VGG+  W   P  + Y++WA    F V D L F +  G 
Sbjct: 11  SFLILASFATFFSVADAWRFNVGGNGAWVTNPQEN-YNTWAERNRFQVNDSLYFKYAKGS 70

Query: 66  HDVAGVTKVGYDNCNTTNP--KFLNATSPFSFTLDTLDDFFFICTVPDHCSAGQKLAITN 125
             V  V K  +D CN  NP   F N  S    TLD    F+FI    DHC  GQKL +  
Sbjct: 71  DSVQQVMKADFDGCNVRNPIKNFENGES--VVTLDRSGAFYFISGNQDHCQKGQKLIVVV 130

Query: 126 L----QQSPPPGSPNSPPVSGNEPPPPGSPDSPPVSGAMP----PPVITAPP--PPNSVT 176
           L    Q S P  SP  P VS  +PP   SP SP    + P    PP  +  P  PP S +
Sbjct: 131 LAVRNQPSAPAHSP-VPSVSPTQPPKSHSPVSPVAPASAPSKSQPPRSSVSPAQPPKSSS 188

The following BLAST results are available for this feature:

BLAST of Lsi06G009840 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P42849	1.1e-19	49.47	Umecyanin OS=Armoracia rusticana OX=3704 PE=1 SV=1	[more]
Q07488	3.1e-19	36.68	Blue copper protein OS=Arabidopsis thaliana OX=3702 GN=BCB PE=2 SV=2	[more]
P29602	5.0e-17	44.20	Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3	[more]
Q96316	9.1e-11	35.71	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
O82081	1.2e-10	33.91	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]

BLAST of Lsi06G009840 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU53	3.9e-73	78.06	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G348430...	[more]
A0A5D3C3K6	6.7e-73	78.87	Umecyanin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00107...	[more]
A0A1S3BA42	6.7e-73	78.87	umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487434 PE=4 SV=1	[more]
A0A1S3BA83	2.6e-48	63.59	umecyanin-like OS=Cucumis melo OX=3656 GN=LOC103487498 PE=4 SV=1	[more]
A0A5D3C5I5	1.1e-46	62.69	Phytocyanin domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]

BLAST of Lsi06G009840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150037.1	8.1e-73	78.06	cucumber peeling cupredoxin-like [Cucumis sativus] >KGN65338.1 hypothetical prot...	[more]
XP_008443977.1	1.4e-72	78.87	PREDICTED: umecyanin-like [Cucumis melo] >KAA0050151.1 umecyanin-like [Cucumis m...	[more]
XP_038878561.1	3.8e-70	77.32	umecyanin-like [Benincasa hispida]	[more]
XP_008444048.1	5.3e-48	63.59	PREDICTED: umecyanin-like [Cucumis melo]	[more]
KAA0050152.1	2.2e-46	62.69	uncharacterized protein E6C27_scaffold675G001830 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Lsi06G009840 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20230.1	2.2e-20	36.68	blue-copper-binding protein	[more]
AT5G26330.1	2.0e-13	35.83	Cupredoxin superfamily protein	[more]
AT3G60280.1	6.5e-12	35.71	uclacyanin 3	[more]
AT2G32300.1	8.5e-12	33.91	uclacyanin 1	[more]
AT5G53870.1	2.5e-11	36.26	early nodulin-like protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 33..117 e-value: 3.5E-18 score: 65.4
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 23..125 score: 36.694691
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 25..132 e-value: 3.8E-32 score: 112.7
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 22..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..165
None	No IPR available	PANTHER	PTHR33021:SF302	BLUE COPPER PROTEIN	coord: 5..128
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 5..128

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G009840.1	Lsi06G009840.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
cellular_component	GO:0046658	anchored component of plasma membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0009055	electron transfer activity