Lsi06G008550 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G008550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Major facilitator superfamily protein
Location	chr06: 17975200 .. 17976594 (-)
RNA-Seq Expression	Lsi06G008550
Synteny	Lsi06G008550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGACTTCTGGTGAGGACTTGCTGCGGTTTGGAATGTGGGATCGAAAACGTGAAGCTTTCTCAACGTACAAGCGATTGTCATTGAAAGATAACTCCAATTCAATTGACATGGAGGATAATTCAGGTAGCCCATTATTTGGCAGTCTGTAGCTTTGCGAGCAATGGATTTCATTTGGAAATATTTTCTGAATCGATGGGCTTTTTAAAATGATGGTGAAGACACGATAGTTGGTGTAACTTGGGGTTTTTTTTTAGCTCTTTTGCAGAGTGGTAAGGATTTCGAAGCCTCAAACCCTTCATGGAGTCTTTCTTTACCGCACGTGCTAGTGGCAACCTTAACTTCATTTCTATTTGGCTACCACCTGGGGTTAGTTCTCTATACTGGTTTCAGCTCTCTCTCTTTCTCTCGGTGTCAATGTTCGGTGAAGCTGATCTTGCTTGTTTGTTCACAAGTAGACACTGACTATATGTTGCTATCTTCTGCAGAGTAGTAAATGAACCACTGGAAAGCATTTCTGCGGATCTTGGTTTCAATGGGAATACATTGGCAGAAGGTGTCATGCTGAGAATTTCTTGTTTGTTCTATTTAATTCCAATTGTTTAATTGAGATTATTCAATGCTCTTAATGTGCTTTACCATTATATTTCCGATGAAGGTTTGGTTGTGAGTACATGTCTTGGTGGTGCCTTAATTGGATCTTTACTGAGTGGTTGGGTAGCTGATGGGGTTGGGCGTCGTAGGGCTTTTCAACTGAGTGCTTTGCCAATGATTCTTGGTGCTGGAATGAGGTGAAATGTTCTAACCATAAAAGGCAATTCTAGCCAAGTTCTACCATGCTGTTTATCATACCTTCATGCTTTTTGCTCGGCAATCTTGGCATTGTTCCCGTGTATTATAATAAACTGGTATGTTTGTGTATGCTTGTGTTGAATTTGACTTCACATACTACCTTTATCATAACAATCACTGCCACGGTCTTGTTATGATGTGACTCCTATATGTTCTTTAGGTCATTCGTTTGCCGCTACTGATATAATTCTCAGTAACATTAGTTCTGGCATTTTCTGTCAATTGGTCTTTTCTGTTCATACTTTTGCAATTTAATTCACGAGTACACTTTTTTTAATTCTTTGGCCATATCATGGCTAGGTGTTGGCAAAAGTAATACCAGTTGAACCCAGCAAGTGTGGGAGGGTGGTTGAATCATATGGTGGGGTAAGGGTCAGGGTCAGCCATATTTATAAGGGGAGTGTTCTTCAGTTCATCTAACAAAAACCATAATGAGAAAAGGGGGTCTTGGCCGACTTAATTATGTTTAGTTGACTAGAGGCAGTGGGCTCAATGGTAACTTTGAAAGTTTCCACTTGTCAGCATTGTACTCCTCCAGTCAATAG

mRNA sequence

AGGACTTCTGGTGAGGACTTGCTGCGGTTTGGAATGTGGGATCGAAAACGTGAAGCTTTCTCAACGTACAAGCGATTGTCATTGAAAGATAACTCCAATTCAATTGACATGGAGGATAATTCAGGTAGCCCATTATTTGGCACTCTTTTGCAGAGTGGTAAGGATTTCGAAGCCTCAAACCCTTCATGGAGTCTTTCTTTACCGCACGTGCTAGTGGCAACCTTAACTTCATTTCTATTTGGCTACCACCTGGGAGTAGTAAATGAACCACTGGAAAGCATTTCTGCGGATCTTGGTTTCAATGGGAATACATTGGCAGAAGGTTTGGTTGTGAGTACATGTCTTGGTGGTGCCTTAATTGGATCTTTACTGAGTGGTTGGGTAGCTGATGGGGTTGGGCGTCGTAGGGCTTTTCAACTGAGTGCTTTGCCAATGATTCTTGGTCATTCGTTTGCCGCTACTGATATAATTCTCAGTAACATTAGTTCTGGCATTTTCTGTCAATTGGTGTTGGCAAAAGTAATACCAGTTGAACCCAGCAAGTGTGGGAGGGTGGTTGAATCATATGGTGGGTTGACTAGAGGCAGTGGGCTCAATGGTAACTTTGAAAGTTTCCACTTGTCAGCATTGTACTCCTCCAGTCAATAG

Coding sequence (CDS)

AGGACTTCTGGTGAGGACTTGCTGCGGTTTGGAATGTGGGATCGAAAACGTGAAGCTTTCTCAACGTACAAGCGATTGTCATTGAAAGATAACTCCAATTCAATTGACATGGAGGATAATTCAGGTAGCCCATTATTTGGCACTCTTTTGCAGAGTGGTAAGGATTTCGAAGCCTCAAACCCTTCATGGAGTCTTTCTTTACCGCACGTGCTAGTGGCAACCTTAACTTCATTTCTATTTGGCTACCACCTGGGAGTAGTAAATGAACCACTGGAAAGCATTTCTGCGGATCTTGGTTTCAATGGGAATACATTGGCAGAAGGTTTGGTTGTGAGTACATGTCTTGGTGGTGCCTTAATTGGATCTTTACTGAGTGGTTGGGTAGCTGATGGGGTTGGGCGTCGTAGGGCTTTTCAACTGAGTGCTTTGCCAATGATTCTTGGTCATTCGTTTGCCGCTACTGATATAATTCTCAGTAACATTAGTTCTGGCATTTTCTGTCAATTGGTGTTGGCAAAAGTAATACCAGTTGAACCCAGCAAGTGTGGGAGGGTGGTTGAATCATATGGTGGGTTGACTAGAGGCAGTGGGCTCAATGGTAACTTTGAAAGTTTCCACTTGTCAGCATTGTACTCCTCCAGTCAATAG

Protein sequence

RTSGEDLLRFGMWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSALPMILGHSFAATDIILSNISSGIFCQLVLAKVIPVEPSKCGRVVESYGGLTRGSGLNGNFESFHLSALYSSSQ

Homology

[Close]

BLAST of Lsi06G008550 vs. ExPASy Swiss-Prot
Match: Q9FYG3 (Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67300 PE=2 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.7e-42
Identity = 93/135 (68.89%), Postives = 107/135 (79.26%), Query Frame = 0


Query: 16  KREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKD--FEASNPSWSLSLPHVLVA 75
           +RE  S YKR S +D S  ID+ED+SG      LL++  D   E +NPSW  SLPHVLVA
Sbjct: 5   QRETSSMYKRTSSRDYSPMIDVEDSSG------LLENDVDNEMETTNPSWKCSLPHVLVA 64

Query: 76  TLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVG 135
           T++SFLFGYHLGVVNEPLESIS+DLGF+G+TLAEGLVVS CLGGA +GSL SG VADG G
Sbjct: 65  TISSFLFGYHLGVVNEPLESISSDLGFSGDTLAEGLVVSVCLGGAFLGSLFSGGVADGFG 124

Query: 136 RRRAFQLSALPMILG 149
           RRRAFQ+ ALPMILG
Sbjct: 125 RRRAFQICALPMILG 133

[Close]

BLAST of Lsi06G008550 vs. ExPASy Swiss-Prot
Match: Q2V4B9 (Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana OX=3702 GN=At1g79820 PE=2 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 5.7e-38
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 24  KRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSFLFGYH 83
           KR+  K+  +++D  + +        L +G   +  NPSW  SLPHVLVA+LTS LFGYH
Sbjct: 18  KRVPSKEFLSALDKAETA------VRLPTGTGKDCGNPSWKRSLPHVLVASLTSLLFGYH 77

Query: 84  LGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSAL 143
           LGVVNE LESIS DLGF+GNT+AEGLVVSTCLGGA IGSL SG VADGVGRRRAFQLSAL
Sbjct: 78  LGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSAL 137

Query: 144 PMILGHSFAATDIILSNISSGIF 167
           PMI+G S +A+   L  +  G F
Sbjct: 138 PMIVGASVSASTESLMGMLLGRF 154

[Close]

BLAST of Lsi06G008550 vs. ExPASy Swiss-Prot
Match: Q0WVE9 (Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana OX=3702 GN=At1g05030 PE=2 SV=2)

HSP 1 Score: 100.1 bits (248), Expect = 3.1e-20
Identity = 50/104 (48.08%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 63  WSLSLPHVLVATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGS 122
           W  + PHV VA++ +FLFGYH+GV+N P+ SI+ +LGF GN++ EGLVVS  + GA IGS
Sbjct: 76  WLSAFPHVSVASMANFLFGYHIGVMNGPIVSIARELGFEGNSILEGLVVSIFIAGAFIGS 135

Query: 123 LLSGWVADGVGRRRAFQLSALPMILGHSFAATDIILSNISSGIF 167
           +++G + D  G RR FQ+  +P+ILG   +A    L  I  G F
Sbjct: 136 IVAGPLVDKFGYRRTFQIFTIPLILGALVSAQAHSLDEILCGRF 179

[Close]

BLAST of Lsi06G008550 vs. ExPASy Swiss-Prot
Match: Q56ZZ7 (Plastidic glucose transporter 4 OS=Arabidopsis thaliana OX=3702 GN=At5g16150 PE=1 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 3.6e-16
Identity = 60/172 (34.88%), Postives = 88/172 (51.16%), Query Frame = 0


Query: 19  AFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSF 78
           +FS+ K  S++  ++S D ++    PL            +   S    LP V VA L + 
Sbjct: 70  SFSSVKARSVRAQASS-DGDEEEAIPL-----------RSEGKSSGTVLPFVGVACLGAI 129

Query: 79  LFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAF 138
           LFGYHLGVVN  LE ++ DLG   NT+ +G +VS+ L GA +GS   G +AD  GR R F
Sbjct: 130 LFGYHLGVVNGALEYLAKDLGIAENTVLQGWIVSSLLAGATVGSFTGGALADKFGRTRTF 189

Query: 139 QLSALPMILGHSFAAT---------DIILSNISSGIFCQLVLAKVIPVEPSK 182
           QL A+P+ +G    AT           +L+ I  GI   +V   +  + P++
Sbjct: 190 QLDAIPLAIGAFLCATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTE 229

[Close]

BLAST of Lsi06G008550 vs. ExPASy Swiss-Prot
Match: A0A0H2VG78 (Glucose transporter GlcP OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=glcP PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.6e-06
Identity = 35/94 (37.23%), Postives = 52/94 (55.32%), Query Frame = 0


Query: 71  LVATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVAD 130
           ++  L   L+GY  GV++  L  I  D+  N  T  EG+VVS+ L GA++G+  SG +AD
Sbjct: 10  ILGALGGLLYGYDNGVISGALLFIHKDIPLNSTT--EGIVVSSMLIGAIVGAGSSGPLAD 69

Query: 131 GVGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
            +GRRR   L A+  I+G    A    L+ +  G
Sbjct: 70  KLGRRRLVMLIAIVFIIGALILAASTNLALLIIG 101

[Close]

BLAST of Lsi06G008550 vs. ExPASy TrEMBL
Match: A0A5D3E0T8 (Putative plastidic glucose transporter 2 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3607G00120 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. ExPASy TrEMBL
Match: A0A5A7V6L3 (Putative plastidic glucose transporter 2 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001060 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. ExPASy TrEMBL
Match: A0A1S3CJ84 (probable plastidic glucose transporter 2 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103501027 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. ExPASy TrEMBL
Match: A0A1S4E4M0 (probable plastidic glucose transporter 2 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103501027 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. ExPASy TrEMBL
Match: A0A1S3CI55 (probable plastidic glucose transporter 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501027 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 1.3e-61
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. NCBI nr
Match: XP_038879454.1 (probable plastidic glucose transporter 2 isoform X1 [Benincasa hispida] >XP_038879455.1 probable plastidic glucose transporter 2 isoform X1 [Benincasa hispida] >XP_038879456.1 probable plastidic glucose transporter 2 isoform X1 [Benincasa hispida])

HSP 1 Score: 249.2 bits (635), Expect = 3.2e-62
Identity = 131/157 (83.44%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLS KDN+N IDMEDNS       LLQSGKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSYKDNANPIDMEDNS------ALLQSGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILG---HSFAATDIILSNISSGI 166
           VGRRRAFQLSALPMILG     F+  + IL+N+   +
Sbjct: 121 VGRRRAFQLSALPMILGAGMRLFSNREAILANVDRAV 151

[Close]

BLAST of Lsi06G008550 vs. NCBI nr
Match: XP_038879457.1 (probable plastidic glucose transporter 2 isoform X2 [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 7.1e-62
Identity = 130/153 (84.97%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLS KDN+N IDMEDNS       LLQSGKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSYKDNANPIDMEDNS------ALLQSGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. NCBI nr
Match: KAA0062607.1 (putative plastidic glucose transporter 2 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-61
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. NCBI nr
Match: XP_016902920.1 (PREDICTED: probable plastidic glucose transporter 2 isoform X4 [Cucumis melo])

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-61
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. NCBI nr
Match: TYK29703.1 (putative plastidic glucose transporter 2 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 246.1 bits (627), Expect = 2.7e-61
Identity = 129/153 (84.31%), Postives = 134/153 (87.58%), Query Frame = 0


Query: 12  MWDRKREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVL 71
           MWDRKREAFSTYKRLSLKDNSNSIDMEDNS        LQ+GKDFEASNPSWSLSLPHVL
Sbjct: 1   MWDRKREAFSTYKRLSLKDNSNSIDMEDNSAH------LQNGKDFEASNPSWSLSLPHVL 60

Query: 72  VATLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADG 131
           VATLTSFLFGYHLGVVNEPLE ISADLGFNGNT+AEGLVVSTCLGGALIGSLLSGWVADG
Sbjct: 61  VATLTSFLFGYHLGVVNEPLEIISADLGFNGNTMAEGLVVSTCLGGALIGSLLSGWVADG 120

Query: 132 VGRRRAFQLSALPMILGHSFAATDIILSNISSG 165
           VGRRRAFQLSALPMILG   +A    L+ +  G
Sbjct: 121 VGRRRAFQLSALPMILGAGMSAMTKTLAGMLLG 147

[Close]

BLAST of Lsi06G008550 vs. TAIR 10
Match: AT1G67300.2 (Major facilitator superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 93/135 (68.89%), Postives = 107/135 (79.26%), Query Frame = 0


Query: 16  KREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKD--FEASNPSWSLSLPHVLVA 75
           +RE  S YKR S +D S  ID+ED+SG      LL++  D   E +NPSW  SLPHVLVA
Sbjct: 5   QRETSSMYKRTSSRDYSPMIDVEDSSG------LLENDVDNEMETTNPSWKCSLPHVLVA 64

Query: 76  TLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVG 135
           T++SFLFGYHLGVVNEPLESIS+DLGF+G+TLAEGLVVS CLGGA +GSL SG VADG G
Sbjct: 65  TISSFLFGYHLGVVNEPLESISSDLGFSGDTLAEGLVVSVCLGGAFLGSLFSGGVADGFG 124

Query: 136 RRRAFQLSALPMILG 149
           RRRAFQ+ ALPMILG
Sbjct: 125 RRRAFQICALPMILG 133

[Close]

BLAST of Lsi06G008550 vs. TAIR 10
Match: AT1G67300.1 (Major facilitator superfamily protein )

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-43
Identity = 93/135 (68.89%), Postives = 107/135 (79.26%), Query Frame = 0


Query: 16  KREAFSTYKRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKD--FEASNPSWSLSLPHVLVA 75
           +RE  S YKR S +D S  ID+ED+SG      LL++  D   E +NPSW  SLPHVLVA
Sbjct: 5   QRETSSMYKRTSSRDYSPMIDVEDSSG------LLENDVDNEMETTNPSWKCSLPHVLVA 64

Query: 76  TLTSFLFGYHLGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVG 135
           T++SFLFGYHLGVVNEPLESIS+DLGF+G+TLAEGLVVS CLGGA +GSL SG VADG G
Sbjct: 65  TISSFLFGYHLGVVNEPLESISSDLGFSGDTLAEGLVVSVCLGGAFLGSLFSGGVADGFG 124

Query: 136 RRRAFQLSALPMILG 149
           RRRAFQ+ ALPMILG
Sbjct: 125 RRRAFQICALPMILG 133

[Close]

BLAST of Lsi06G008550 vs. TAIR 10
Match: AT1G79820.1 (Major facilitator superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-39
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 24  KRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSFLFGYH 83
           KR+  K+  +++D  + +        L +G   +  NPSW  SLPHVLVA+LTS LFGYH
Sbjct: 18  KRVPSKEFLSALDKAETA------VRLPTGTGKDCGNPSWKRSLPHVLVASLTSLLFGYH 77

Query: 84  LGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSAL 143
           LGVVNE LESIS DLGF+GNT+AEGLVVSTCLGGA IGSL SG VADGVGRRRAFQLSAL
Sbjct: 78  LGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSAL 137

Query: 144 PMILGHSFAATDIILSNISSGIF 167
           PMI+G S +A+   L  +  G F
Sbjct: 138 PMIVGASVSASTESLMGMLLGRF 154

[Close]

BLAST of Lsi06G008550 vs. TAIR 10
Match: AT1G79820.2 (Major facilitator superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-39
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 24  KRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSFLFGYH 83
           KR+  K+  +++D  + +        L +G   +  NPSW  SLPHVLVA+LTS LFGYH
Sbjct: 18  KRVPSKEFLSALDKAETA------VRLPTGTGKDCGNPSWKRSLPHVLVASLTSLLFGYH 77

Query: 84  LGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSAL 143
           LGVVNE LESIS DLGF+GNT+AEGLVVSTCLGGA IGSL SG VADGVGRRRAFQLSAL
Sbjct: 78  LGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSAL 137

Query: 144 PMILGHSFAATDIILSNISSGIF 167
           PMI+G S +A+   L  +  G F
Sbjct: 138 PMIVGASVSASTESLMGMLLGRF 154

[Close]

BLAST of Lsi06G008550 vs. TAIR 10
Match: AT1G79820.3 (Major facilitator superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 4.1e-39
Identity = 88/143 (61.54%), Postives = 104/143 (72.73%), Query Frame = 0


Query: 24  KRLSLKDNSNSIDMEDNSGSPLFGTLLQSGKDFEASNPSWSLSLPHVLVATLTSFLFGYH 83
           KR+  K+  +++D  + +        L +G   +  NPSW  SLPHVLVA+LTS LFGYH
Sbjct: 18  KRVPSKEFLSALDKAETA------VRLPTGTGKDCGNPSWKRSLPHVLVASLTSLLFGYH 77

Query: 84  LGVVNEPLESISADLGFNGNTLAEGLVVSTCLGGALIGSLLSGWVADGVGRRRAFQLSAL 143
           LGVVNE LESIS DLGF+GNT+AEGLVVSTCLGGA IGSL SG VADGVGRRRAFQLSAL
Sbjct: 78  LGVVNETLESISIDLGFSGNTIAEGLVVSTCLGGAFIGSLFSGLVADGVGRRRAFQLSAL 137

Query: 144 PMILGHSFAATDIILSNISSGIF 167
           PMI+G S +A+   L  +  G F
Sbjct: 138 PMIVGASVSASTESLMGMLLGRF 154

The following BLAST results are available for this feature:

BLAST of Lsi06G008550 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FYG3	1.7e-42	68.89	Probable plastidic glucose transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
Q2V4B9	5.7e-38	61.54	Probable plastidic glucose transporter 3 OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
Q0WVE9	3.1e-20	48.08	Probable plastidic glucose transporter 1 OS=Arabidopsis thaliana OX=3702 GN=At1g...	[more]
Q56ZZ7	3.6e-16	34.88	Plastidic glucose transporter 4 OS=Arabidopsis thaliana OX=3702 GN=At5g16150 PE=...	[more]
A0A0H2VG78	2.6e-06	37.23	Glucose transporter GlcP OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA ...	[more]

BLAST of Lsi06G008550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0T8	1.3e-61	84.31	Putative plastidic glucose transporter 2 isoform X2 OS=Cucumis melo var. makuwa ...	[more]
A0A5A7V6L3	1.3e-61	84.31	Putative plastidic glucose transporter 2 isoform X1 OS=Cucumis melo var. makuwa ...	[more]
A0A1S3CJ84	1.3e-61	84.31	probable plastidic glucose transporter 2 isoform X3 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A1S4E4M0	1.3e-61	84.31	probable plastidic glucose transporter 2 isoform X4 OS=Cucumis melo OX=3656 GN=L...	[more]
A0A1S3CI55	1.3e-61	84.31	probable plastidic glucose transporter 2 isoform X2 OS=Cucumis melo OX=3656 GN=L...	[more]

BLAST of Lsi06G008550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879454.1	3.2e-62	83.44	probable plastidic glucose transporter 2 isoform X1 [Benincasa hispida] >XP_0388...	[more]
XP_038879457.1	7.1e-62	84.97	probable plastidic glucose transporter 2 isoform X2 [Benincasa hispida]	[more]
KAA0062607.1	2.7e-61	84.31	putative plastidic glucose transporter 2 isoform X1 [Cucumis melo var. makuwa]	[more]
XP_016902920.1	2.7e-61	84.31	PREDICTED: probable plastidic glucose transporter 2 isoform X4 [Cucumis melo]	[more]
TYK29703.1	2.7e-61	84.31	putative plastidic glucose transporter 2 isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi06G008550 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67300.2	1.2e-43	68.89	Major facilitator superfamily protein	[more]
AT1G67300.1	1.2e-43	68.89	Major facilitator superfamily protein	[more]
AT1G79820.1	4.1e-39	61.54	Major facilitator superfamily protein	[more]
AT1G79820.2	4.1e-39	61.54	Major facilitator superfamily protein	[more]
AT1G79820.3	4.1e-39	61.54	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 64..175 e-value: 3.4E-17 score: 64.7
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 57..157
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 70..153 e-value: 5.1E-10 score: 38.8
None	No IPR available	PANTHER	PTHR23503:SF114	PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED	coord: 13..161
None	No IPR available	PANTHER	PTHR23503	FAMILY NOT NAMED	coord: 13..161
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 125..142
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 69..215 score: 12.696113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G008550.1	Lsi06G008550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008643	carbohydrate transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity