Lsi06G008310 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTTAAGGTACGTTACACATACAATAATAAAATAGTTGAGAAGGATGTTTACGAAAGTGCTTCGATTATTTACGACATGAATAGCGTGAAGCAATCGAGTTTTGGCGACGAAAGTTGTAACGTTGTTAGAAAGTGTATCTGTCCACGAGTAATGCGTGGGAATTTATGCCCACGAATTTTGTTGCGCGGGCAGAAAACGATTTTGTTAGTTGCGTGGCCAGAAAGACTTTTATGCCCACGTGTTTTATTACGTGAGCATTTCTGCCGACGCAACGTCAAAATGCGTGGCAGAAGCTCTGCCCACGCAAAAAAAGTCGATAGAGGTTTTTTCCACACTTGTAGGAGGATCCGCTGACGTTTTCTTGCATGCGTAGAGACAAAAATGCTTGTAGTGAAAATAACTAATATTTACGTCTTCCACTATGTTATTTAATTGATTTATAATATTTTATAGTCTCATTTATAGATGCCCACTTTTCCATGAGGACGGGCCCGCCGTGATCCAGCCTGAATGGGGCAGAAATTTCCATTTAGGCGCGAAATGAGGGAGAGAGTGAGAAAAAAATTTCCGAAAAGCTAAATGGGGACAAGGACGGGGATGGACCCCATTTCATGTCCTCGCCTTGTTAGACTTTTTTTTTCTTATATTTATTATAATAATTTAATATTGTCTTATTTATTTTTATTATACAAATATTATATTTAATTTTAAAGTGTTATTGTTTTATAGTCAAAATAATGAATATGTTTGAATTAGCGTAAAAAGATAGGTTTAAATTCTAATAAATTTAGATTATATATATAAATAATTTAATAAATATTTATTTCCTACAACTTGAAAATTTTGAATAATTTTCTCTTTAAATTATAATTGTTTACTTGGAACTAATCATATAAAAGTTAACCATTTAATTGAAATTTTTTCATAATAATGATTTATGTTAATTGATTTTTTTTAAAAGTCAAATAGAAAAAATTCTCGAGGAATCCACGCCCCGAATTTGGCGGGATGGGGAGCGGGGAAGCAATTTACTGGCCTGTCCTGCCCTATAAACATCTCTAGTCTCAAGAAAACTTTCGTTTAGAACGCACGGAAAGAAACAAAAGGGGCAGTCTCTCTCTCATCCACTAGCCTCCGACCGCCACATGTCCGCCAATGAGTGTTTTCCGTCCCTACCCACTTCTCCGTCCGTCTCTCTCAAACTCGCTCTTTATTCAGTTTTTGCCATTGTCGCCCGTCCCCGACGCCTTCTCTACCATGAGCAGCCGTTTCGTTGAGCACATGGACACTGCCGCCAGACTGCCACCGTATTGATCCTACCGTGGGTGAAAGTTTGGTGAGTTTCTCTCATGGTTTTCTTGTTTAATCTTGAATACTCAAAACATATGGAAAGATAGATCTATCTTTATGCATCTCACTTACATCACTTATAAAAATAATTCAAATATTTAAAAAAAGAAATTAGAAGAATTTTCTACATGAATTTGATAGGATGCACAAATTTAAATACTACTCAAGATGTACTCAAATATTTTTTTTTATTTTAGTATATAAATTTTAGGTTTTTAATGAATAAAATGCAAGTGAATCTATTTTTTTTTTTTTTTTTAATATATAAGGTGGAGTATGAAACACCTAACCTTGAAGTCAAAACTTTAAGTTTGTTGAGCGGCTATTATCTTTAGAGCAGCTTCATCATTATAGTGTATAAATTTTAGGTCAAATTAAAATTGTAGTTTAAAAATTAGAATTAATCTCTAAAATTTGATAAAAATTCCAAAAACTATTTATGAAAGTTGTATTAAATAAAGCAGAACTAAAATTTAACTTCCTCCAAAATTATATTTTAAGGTAAATTTTATGTTTGTTTGTTGGTTACAAAATATTGTTAATTTTGATCTCATCACGGGTAAAACACGGTTGAATGGTAATAAGAAAGTGTCTAATGATGTGCACAAAACAACTTCAACTCTTTGTGTTATGAGAAGAAGTGAGGAAGTATTTAAGGCATTGGAGCCAACATGTCATTTCACATATCATCAGAGAAGATATAGGAAATCAATTTCCAGGTTTAACTTCAACTTCCACTTCCATAGTCAACGAACAACCTCTCAAACTCAACGACAATGAAAATGCAACCTTGGAGTTGGCGGAATTTGGTGGAGCTCCCACGATAATAATGCCACCGATGCCGGCGATCGTGAACATAATCAAAACGTGTAGCCCACTGTTTTCGAAGCAAATGACAAAAGCTGACTTGGCAGATGGACAAGGGCGATTGACACTTAAAAAAAATTTGTTATATGTCATTTGGCTCCCATGTTCAATGACAGCGAGAACCTGAGTGAGGGAATTGATGTTATAGTTTTTTATAGTGAACGAAGAGAATACGACATGACGTTCAAGGTTTGGACTTCTAAATTTTATGTGCTCATGAAAGGTTGGAAGGAGTTTTACAAGACCAATAATTTAACTCAACCTGGTGAATACATCACCGTTTGGATGTTTCGATATATCGATCTTCACAAACTTTGCTTGCTATTACTCGAGGAAGAGTTGAAGGGCATTGAGCTTCTCTCGACCTCCTCCATCTTTGCATCTTGGCCCATTGGACTACTTTCTTTTTTAATTATTATTCTTTTTTAAAATAATTCCTCATTTTTTTTAAGTCGATAAATATTGTGGGGTGAACATTATTTTTTTTTTTTTAATGTTTTACTTTAAATTTTTAGTTCATCATTACTAGTTTCAAATCTTTGAGCTAGTCAGGATATTTGTTTATTTCAATTCAGCTATTCTAATTGTTATGTTCTTTTCTTTTTTATTTTTTTTTTTTTAATGTTTTACTTTAAATTTTTAGTTCAACATTACTAGTTTCAAATCTTTGAGCTAGTCAAGGATATTTGTTTATTTCAATTCAGCTATTCTAATTGTTATTTTCTTTTCTTTTTTATTTTTTTTATTAATATATAAGTGATTTTTCGCCTATTTCTTTAATTTGTTATTAATTTAGTACCATACTTTTACTTAAGTTTATTTTAAATAGTAAATTGATTCGCTTATAAAAGTTAAGATCTTTTAATTACGAATTTAGTACTATACTTTTTACTTAAGTTTATTTTAAATAGTAAATTGATTCACTCATAAAAGTTAAGATTTTTTAATTAAAAATTTAAGATTTTAATTGATGTAGCCATTAATTTCAGTGGTTACGTATTTTCCTTTAATGATAGAGGTTTAAATTCAATCACTTAA ATGGTTAAGTTTTTGCCATTGTCGCCCGTCCCCGACGCCTTCTCTACCATGAGCAGCCGTTTCGTTGAGCACATGGACACTGCCGCCAGACTGCCACCAGAAGATATAGGAAATCAATTTCCAGGTTTAACTTCAACTTCCACTTCCATAGTCAACGAACAACCTCTCAAACTCAACGACAATGAAAATGCAACCTTGGAGTTGGCGGAATTTGGTGGAGCTCCCACGATAATAATGCCACCGATGCCGGCGATCGTGAACATAATCAAAACGTGTAGCCCACTGTTTTCGAAGCAAATGACAAAAGCTGACTTGGCAGATGGACAAGGGCGATTGACACTTAAAAAAAATTTTGAACGAAGAGAATACGACATGACGTTCAAGGTTTGGACTTCTAAATTTTATGTGCTCATGAAAGGTTGGAAGGAGTTTTACAAGACCAATAATTTAACTCAACCTGGTGAATACATCACCATTTTAATTGATGTAGCCATTAATTTCAGTGGTTACGTATTTTCCTTTAATGATAGAGGTTTAAATTCAATCACTTAA ATGGTTAAGTTTTTGCCATTGTCGCCCGTCCCCGACGCCTTCTCTACCATGAGCAGCCGTTTCGTTGAGCACATGGACACTGCCGCCAGACTGCCACCAGAAGATATAGGAAATCAATTTCCAGGTTTAACTTCAACTTCCACTTCCATAGTCAACGAACAACCTCTCAAACTCAACGACAATGAAAATGCAACCTTGGAGTTGGCGGAATTTGGTGGAGCTCCCACGATAATAATGCCACCGATGCCGGCGATCGTGAACATAATCAAAACGTGTAGCCCACTGTTTTCGAAGCAAATGACAAAAGCTGACTTGGCAGATGGACAAGGGCGATTGACACTTAAAAAAAATTTTGAACGAAGAGAATACGACATGACGTTCAAGGTTTGGACTTCTAAATTTTATGTGCTCATGAAAGGTTGGAAGGAGTTTTACAAGACCAATAATTTAACTCAACCTGGTGAATACATCACCATTTTAATTGATGTAGCCATTAATTTCAGTGGTTACGTATTTTCCTTTAATGATAGAGGTTTAAATTCAATCACTTAA MVKFLPLSPVPDAFSTMSSRFVEHMDTAARLPPEDIGNQFPGLTSTSTSIVNEQPLKLNDNENATLELAEFGGAPTIIMPPMPAIVNIIKTCSPLFSKQMTKADLADGQGRLTLKKNFERREYDMTFKVWTSKFYVLMKGWKEFYKTNNLTQPGEYITILIDVAINFSGYVFSFNDRGLNSIT Homology
BLAST of Lsi06G008310 vs. ExPASy TrEMBL
Match: A0A0A0L7L0 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G073910 PE=4 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 3.9e-22 Identity = 74/170 (43.53%), Postives = 86/170 (50.59%), Query Frame = 0
BLAST of Lsi06G008310 vs. ExPASy TrEMBL
Match: A0A5D3BAS8 (Putative B3 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00040 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 8.1e-20 Identity = 69/171 (40.35%), Postives = 81/171 (47.37%), Query Frame = 0
BLAST of Lsi06G008310 vs. ExPASy TrEMBL
Match: A0A0A0LC65 (TF-B3 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G609250 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 3.5e-15 Identity = 48/104 (46.15%), Postives = 57/104 (54.81%), Query Frame = 0
BLAST of Lsi06G008310 vs. ExPASy TrEMBL
Match: A0A6J1CTE7 (putative B3 domain-containing protein At4g03170 OS=Momordica charantia OX=3673 GN=LOC111014582 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 2.5e-13 Identity = 46/112 (41.07%), Postives = 61/112 (54.46%), Query Frame = 0
BLAST of Lsi06G008310 vs. ExPASy TrEMBL
Match: A0A067L9U6 (TF-B3 domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_15047 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 7.6e-10 Identity = 56/190 (29.47%), Postives = 80/190 (42.11%), Query Frame = 0
BLAST of Lsi06G008310 vs. NCBI nr
Match: KGN56101.1 (hypothetical protein Csa_010492 [Cucumis sativus]) HSP 1 Score: 114.8 bits (286), Expect = 8.0e-22 Identity = 74/170 (43.53%), Postives = 86/170 (50.59%), Query Frame = 0
BLAST of Lsi06G008310 vs. NCBI nr
Match: XP_031736688.1 (uncharacterized protein LOC116402065 [Cucumis sativus]) HSP 1 Score: 108.2 bits (269), Expect = 7.5e-20 Identity = 68/167 (40.72%), Postives = 86/167 (51.50%), Query Frame = 0
BLAST of Lsi06G008310 vs. NCBI nr
Match: KAA0043114.1 (putative B3 domain-containing protein [Cucumis melo var. makuwa] >TYJ96217.1 putative B3 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 107.1 bits (266), Expect = 1.7e-19 Identity = 69/171 (40.35%), Postives = 81/171 (47.37%), Query Frame = 0
BLAST of Lsi06G008310 vs. NCBI nr
Match: KAG6589940.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 105.1 bits (261), Expect = 6.3e-19 Identity = 59/155 (38.06%), Postives = 82/155 (52.90%), Query Frame = 0
BLAST of Lsi06G008310 vs. NCBI nr
Match: KAG7023605.1 (putative B3 domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 102.4 bits (254), Expect = 4.1e-18 Identity = 54/135 (40.00%), Postives = 78/135 (57.78%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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