Lsi06G008060 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G008060
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Calcium-binding EF hand family protein
Location	chr06: 16872415 .. 16872804 (-)
RNA-Seq Expression	Lsi06G008060
Synteny	Lsi06G008060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAATTTCATCAATGACACAAAGATATTTGACGATTGCATCAAGGAAAGTTTTAAGAAGCTTGACACAGACAATGATGGGGTCCTCAATGTGAATGAACTTCGAGTCGGGTTTCGAGGTCAGCCATTAGAATTCGAATTAATGGATCCTGTGGATGATCTATCTGAGGTTGTTTGTCATAAGTTTCATGTGGAGAAAAATGGTGGGATTGATGAAAAAGAGTTTAAGTCTGTAATAAGGGACATTCTTCTTGCCATGGCTCATGGGATTGGAAACTTTCCTCTCCAAGTTGCACTTCAACAAGATAGTTTTCTCATGAAGGCTGTTGAACATGAAAAGGCCAAAGAACAAAAATAG

mRNA sequence

ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAATTTCATCAATGACACAAAGATATTTGACGATTGCATCAAGGAAAGTTTTAAGAAGCTTGACACAGACAATGATGGGGTCCTCAATGTGAATGAACTTCGAGTCGGGTTTCGAGGTCAGCCATTAGAATTCGAATTAATGGATCCTGTGGATGATCTATCTGAGGTTGTTTGTCATAAGTTTCATGTGGAGAAAAATGGTGGGATTGATGAAAAAGAGTTTAAGTCTGTAATAAGGGACATTCTTCTTGCCATGGCTCATGGGATTGGAAACTTTCCTCTCCAAGTTGCACTTCAACAAGATAGTTTTCTCATGAAGGCTGTTGAACATGAAAAGGCCAAAGAACAAAAATAG

Coding sequence (CDS)

ATGAGTGTGGCTTTTCTTAATGATACAACAGTTACAAATTTCATCAATGACACAAAGATATTTGACGATTGCATCAAGGAAAGTTTTAAGAAGCTTGACACAGACAATGATGGGGTCCTCAATGTGAATGAACTTCGAGTCGGGTTTCGAGGTCAGCCATTAGAATTCGAATTAATGGATCCTGTGGATGATCTATCTGAGGTTGTTTGTCATAAGTTTCATGTGGAGAAAAATGGTGGGATTGATGAAAAAGAGTTTAAGTCTGTAATAAGGGACATTCTTCTTGCCATGGCTCATGGGATTGGAAACTTTCCTCTCCAAGTTGCACTTCAACAAGATAGTTTTCTCATGAAGGCTGTTGAACATGAAAAGGCCAAAGAACAAAAATAG

Protein sequence

MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMDPVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAVEHEKAKEQK

Homology

[Close]

BLAST of Lsi06G008060 vs. ExPASy TrEMBL
Match: A0A0A0LYD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695380 PE=4 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 2.1e-59
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTVTNFINDTKIFDDC+KESFKKLDTDNDG LN+NELRVGFR  PLEFELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDLSEVVCHKF VEK+GGIDE+EFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAV 120

Query: 121 EHEKAKEQK 130
           E EKA+EQK
Sbjct: 121 ELEKAREQK 129

[Close]

BLAST of Lsi06G008060 vs. ExPASy TrEMBL
Match: A0A5A7VAA7 (Calcium-binding EF hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G00860 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTVTNFINDTKIFDDC+KESFKKLD DNDG LN NELR GF  QPLE ELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDL EVVCHKF+VEK+GGIDEKEFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAV 120

Query: 121 EHEKAKEQK 130
           E EKAKEQK
Sbjct: 121 ELEKAKEQK 129

[Close]

BLAST of Lsi06G008060 vs. ExPASy TrEMBL
Match: A0A1S3CI80 (uncharacterized protein LOC103501058 OS=Cucumis melo OX=3656 GN=LOC103501058 PE=4 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTVTNFINDTKIFDDC+KESFKKLD DNDG LN NELR GF  QPLE ELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDL EVVCHKF+VEK+GGIDEKEFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAV 120

Query: 121 EHEKAKEQK 130
           E EKAKEQK
Sbjct: 121 ELEKAKEQK 129

[Close]

BLAST of Lsi06G008060 vs. ExPASy TrEMBL
Match: A0A5D3B8A7 (Calcium-binding EF hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1348G00080 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 6.4e-56
Identity = 114/129 (88.37%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTVTNFINDTKIFDDC+KESFKKLD DNDG LN NELR GF  QPLE ELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDL EVVCHKF+VEK+GGIDE EFKSV+RDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLCEVVCHKFNVEKSGGIDENEFKSVVRDILLAMALGIGNFPLQVALQQDSFLMKAV 120

Query: 121 EHEKAKEQK 130
           E EKAKEQK
Sbjct: 121 ELEKAKEQK 129

[Close]

BLAST of Lsi06G008060 vs. ExPASy TrEMBL
Match: A0A6J1DWE2 (uncharacterized protein LOC111025096 OS=Momordica charantia OX=3673 GN=LOC111025096 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.7e-43
Identity = 91/128 (71.09%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTV +FINDTKIFD+C+KESF+KLD D DG+LN NEL  GFR         D
Sbjct: 1   MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSS------TD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDLS+ VC KF+VEK+GGI+E EFKSV+ +ILLA+A+GIGN PLQVALQQD  LMKAV
Sbjct: 61  PVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPLQVALQQDGLLMKAV 120

Query: 121 EHEKAKEQ 129
           EHE+AKE+
Sbjct: 121 EHERAKEE 122

[Close]

BLAST of Lsi06G008060 vs. NCBI nr
Match: XP_004142569.1 (uncharacterized protein LOC101222885 [Cucumis sativus] >KGN66803.1 hypothetical protein Csa_006967 [Cucumis sativus])

HSP 1 Score: 238.0 bits (606), Expect = 4.4e-59
Identity = 118/129 (91.47%), Postives = 123/129 (95.35%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTVTNFINDTKIFDDC+KESFKKLDTDNDG LN+NELRVGFR  PLEFELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDTDNDGFLNMNELRVGFRSHPLEFELMD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDLSEVVCHKF VEK+GGIDE+EFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLSEVVCHKFQVEKSGGIDEEEFKSVIRDILLAMAQGIGNFPLQVALQQDSFLMKAV 120

Query: 121 EHEKAKEQK 130
           E EKA+EQK
Sbjct: 121 ELEKAREQK 129

[Close]

BLAST of Lsi06G008060 vs. NCBI nr
Match: XP_008462771.1 (PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo] >KAA0062591.1 calcium-binding EF hand family protein [Cucumis melo var. makuwa])

HSP 1 Score: 228.8 bits (582), Expect = 2.7e-56
Identity = 116/129 (89.92%), Postives = 119/129 (92.25%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTVTNFINDTKIFDDC+KESFKKLD DNDG LN NELR GF  QPLE ELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDL EVVCHKF+VEK+GGIDEKEFKSVIRDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLCEVVCHKFNVEKSGGIDEKEFKSVIRDILLAMALGIGNFPLQVALQQDSFLMKAV 120

Query: 121 EHEKAKEQK 130
           E EKAKEQK
Sbjct: 121 ELEKAKEQK 129

[Close]

BLAST of Lsi06G008060 vs. NCBI nr
Match: TYJ95513.1 (calcium-binding EF hand family protein [Cucumis melo var. makuwa])

HSP 1 Score: 226.5 bits (576), Expect = 1.3e-55
Identity = 114/129 (88.37%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTVTNFINDTKIFDDC+KESFKKLD DNDG LN NELR GF  QPLE ELMD
Sbjct: 1   MSVAFLNDTTVTNFINDTKIFDDCVKESFKKLDRDNDGFLNKNELRNGFGSQPLELELMD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDL EVVCHKF+VEK+GGIDE EFKSV+RDILLAMA GIGNFPLQVALQQDSFLMKAV
Sbjct: 61  PVDDLCEVVCHKFNVEKSGGIDENEFKSVVRDILLAMALGIGNFPLQVALQQDSFLMKAV 120

Query: 121 EHEKAKEQK 130
           E EKAKEQK
Sbjct: 121 ELEKAKEQK 129

[Close]

BLAST of Lsi06G008060 vs. NCBI nr
Match: XP_022158640.1 (uncharacterized protein LOC111025096 [Momordica charantia])

HSP 1 Score: 184.1 bits (466), Expect = 7.6e-43
Identity = 91/128 (71.09%), Postives = 106/128 (82.81%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMD 60
           MSVAFLNDTTV +FINDTKIFD+C+KESF+KLD D DG+LN NEL  GFR         D
Sbjct: 1   MSVAFLNDTTVIDFINDTKIFDNCVKESFQKLDIDKDGILNANELLAGFRSS------TD 60

Query: 61  PVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAV 120
           PVDDLS+ VC KF+VEK+GGI+E EFKSV+ +ILLA+A+GIGN PLQVALQQD  LMKAV
Sbjct: 61  PVDDLSQTVCRKFNVEKSGGINENEFKSVVTEILLAIAYGIGNLPLQVALQQDGLLMKAV 120

Query: 121 EHEKAKEQ 129
           EHE+AKE+
Sbjct: 121 EHERAKEE 122

[Close]

BLAST of Lsi06G008060 vs. NCBI nr
Match: XP_034925333.1 (uncharacterized protein LOC118056988 [Populus alba])

HSP 1 Score: 120.9 bits (302), Expect = 7.9e-24
Identity = 60/126 (47.62%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGF---RGQPLEFE 60
           MS+A +N+TTVT F+ D K F++C+KE F+ LD D DGVL+ +ELR GF        E  
Sbjct: 22  MSLAVVNETTVTTFVEDMKAFENCVKECFEMLDVDGDGVLSRSELREGFCKLMSLGHESS 81

Query: 61  LMDPVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLM 120
             + +D L + +  +F  ++NG ID +EFK +IR+++ AM  G+GN P+ VAL+ DS LM
Sbjct: 82  KKEKIDHLFDTIFDRFDEDQNGSIDPREFKGLIRELMAAMGRGLGNSPVLVALEIDSLLM 141

Query: 121 KAVEHE 124
           KAVEHE
Sbjct: 142 KAVEHE 147

[Close]

BLAST of Lsi06G008060 vs. TAIR 10
Match: AT2G44310.1 (Calcium-binding EF-hand family protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.4e-15
Identity = 46/139 (33.09%), Postives = 82/139 (58.99%), Query Frame = 0


Query: 1   MSVAFLNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRGQPL-----E 60
           M V  ++ +TV +F++D + F   + E F  LD + DGVL+ +ELR  F    L      
Sbjct: 1   MGVVLIDGSTVRSFVDDEEQFKKSVDERFAALDLNKDGVLSRSELRKAFESMRLLESHFG 60

Query: 61  FELMDPVDDLSEV---VCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVAL-- 120
            +++ P D+L+ +   +  KF  +++G +D +EF+S ++ I+LA+A G+G+ P+ + L  
Sbjct: 61  VDVVTPQDELTNLYDSIFEKFDTDQSGSVDLEEFRSEMKKIVLAIADGLGSCPITMVLDD 120

Query: 121 QQDSFLMKAVEHEKAKEQK 130
             D+FL KA + E +K +K
Sbjct: 121 DDDNFLKKAADLEASKLEK 139

[Close]

BLAST of Lsi06G008060 vs. TAIR 10
Match: AT1G54530.1 (Calcium-binding EF hand family protein )

HSP 1 Score: 69.3 bits (168), Expect = 2.5e-12
Identity = 41/121 (33.88%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 6   LNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFRG-QPLEFELM--DPV 65
           +   T+  F++DTK F+    + F+ LD D +G+L+ +ELR G      +E E+   D  
Sbjct: 6   ITSKTLIGFLSDTKSFESITNDYFQILDLDKNGMLSPSELRQGLNNVVAVESEVAPGDET 65

Query: 66  DDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQDSFLMKAVEH 124
           D++   +  +F  +    +  K F+ +I +IL AMA GIGN P+ + +  D  +MKAV H
Sbjct: 66  DNVYNAIFERFGED----LVPKNFRDLIAEILTAMARGIGNSPVIMVVHNDGLIMKAVLH 122

[Close]

BLAST of Lsi06G008060 vs. TAIR 10
Match: AT4G38810.2 (Calcium-binding EF-hand family protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.1e-07
Identity = 35/114 (30.70%), Postives = 58/114 (50.88%), Query Frame = 0


Query: 6   LNDTTVTNFINDTKIFDDCIKESFKKLDTDNDGVLNVNELRVGFR------GQPLEFELM 65
           L+ + +   + + K+FD  +++ F++LD D DG L+V EL+          G P +    
Sbjct: 15  LDGSDIVELVENEKVFDKFVEQKFQQLDQDEDGKLSVTELQPAVADIGAALGLPAQGTSP 74

Query: 66  DPVDDLSEVVCHKFHVEKNGGIDEKEFKSVIRDILLAMAHGIGNFPLQVALQQD 114
           D  D +   V ++F       + + EFK V+ DILL MA G+   P+ V L+ D
Sbjct: 75  DS-DHIYSEVLNEFTHGSQEKVSKTEFKEVLSDILLGMAAGLKRDPI-VILRMD 126

[Close]

BLAST of Lsi06G008060 vs. TAIR 10
Match: AT2G41860.1 (calcium-dependent protein kinase 14 )

HSP 1 Score: 42.0 bits (97), Expect = 4.3e-04
Identity = 21/66 (31.82%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 24  CIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMDPVDDLSEVVCHKFHVEKNGGIDE 83
           CIKE F+ +DT N G + + EL +G +    +  ++ P DD+ +++     V+K+G +D 
Sbjct: 359 CIKERFQVMDTSNRGKITITELGIGLQ----KLGIVVPQDDI-QILMDAGDVDKDGYLDV 418

Query: 84  KEFKSV 90
            EF ++
Sbjct: 419 NEFVAI 419

[Close]

BLAST of Lsi06G008060 vs. TAIR 10
Match: AT2G41860.2 (calcium-dependent protein kinase 14 )

HSP 1 Score: 42.0 bits (97), Expect = 4.3e-04
Identity = 21/66 (31.82%), Postives = 39/66 (59.09%), Query Frame = 0


Query: 24  CIKESFKKLDTDNDGVLNVNELRVGFRGQPLEFELMDPVDDLSEVVCHKFHVEKNGGIDE 83
           CIKE F+ +DT N G + + EL +G +    +  ++ P DD+ +++     V+K+G +D 
Sbjct: 359 CIKERFQVMDTSNRGKITITELGIGLQ----KLGIVVPQDDI-QILMDAGDVDKDGYLDV 418

Query: 84  KEFKSV 90
            EF ++
Sbjct: 419 NEFVAI 419

The following BLAST results are available for this feature:

BLAST of Lsi06G008060 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi06G008060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LYD8	2.1e-59	91.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G695380 PE=4 SV=1	[more]
A0A5A7VAA7	1.3e-56	89.92	Calcium-binding EF hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CI80	1.3e-56	89.92	uncharacterized protein LOC103501058 OS=Cucumis melo OX=3656 GN=LOC103501058 PE=...	[more]
A0A5D3B8A7	6.4e-56	88.37	Calcium-binding EF hand family protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A6J1DWE2	3.7e-43	71.09	uncharacterized protein LOC111025096 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Lsi06G008060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004142569.1	4.4e-59	91.47	uncharacterized protein LOC101222885 [Cucumis sativus] >KGN66803.1 hypothetical ...	[more]
XP_008462771.1	2.7e-56	89.92	PREDICTED: uncharacterized protein LOC103501058 [Cucumis melo] >KAA0062591.1 cal...	[more]
TYJ95513.1	1.3e-55	88.37	calcium-binding EF hand family protein [Cucumis melo var. makuwa]	[more]
XP_022158640.1	7.6e-43	71.09	uncharacterized protein LOC111025096 [Momordica charantia]	[more]
XP_034925333.1	7.9e-24	47.62	uncharacterized protein LOC118056988 [Populus alba]	[more]

BLAST of Lsi06G008060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44310.1	1.4e-15	33.09	Calcium-binding EF-hand family protein	[more]
AT1G54530.1	2.5e-12	33.88	Calcium-binding EF hand family protein	[more]
AT4G38810.2	1.1e-07	30.70	Calcium-binding EF-hand family protein	[more]
AT2G41860.1	4.3e-04	31.82	calcium-dependent protein kinase 14	[more]
AT2G41860.2	4.3e-04	31.82	calcium-dependent protein kinase 14	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002048	EF-hand domain	SMART	SM00054	efh_1	coord: 24..52 e-value: 0.0064 score: 25.7 coord: 65..93 e-value: 42.0 score: 4.7
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 20..55 score: 11.723866
None	No IPR available	GENE3D	1.10.238.10		coord: 9..95 e-value: 7.6E-9 score: 37.3
None	No IPR available	PANTHER	PTHR34574	CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED	coord: 1..126
None	No IPR available	PANTHER	PTHR34574:SF12	CALCIUM-BINDING EF HAND FAMILY PROTEIN	coord: 1..126
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 33..45
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 25..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G008060.1	Lsi06G008060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005509	calcium ion binding