Lsi06G007230 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G007230
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like
Location	chr06: 12173347 .. 12180657 (+)
RNA-Seq Expression	Lsi06G007230
Synteny	Lsi06G007230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGGGGGGGGGGGTTTCGCTCATAACCCTATTTTGGTTTCTTTAGATTTGTGAAGTTTCGATTGCATTGAAACTACTAAGTCAGTAGGAGGCTGATTTTGGACTGGTTGAATCGTGGGTCAGCTTCAAAATCTCAAAATTCATCTACCCTTTAACGGGTCAATCCCGGTAACATGGTTTCTGTATCGGGTTCGGTGTTCTTCCCATTAACTGTACCCAATTGTTCCTCTCGATCGCGTAAAGTATCTGTTCTTGATGCGCACAATTCTTTTTATTGTAAGAAAAAGGACCAGAGAAGGATTGTTTGCAATTGCATTGCGCCTCCGCCGTACTTCAAGAGTGATGGATCATCTGCCGTAAATTCCAATGTATATCATTCACATTTTGATTTGTTTCTGTGTGTTTTTTTTCCTATTTCCTGCGCCCTGTGTATTTGATTGATACTTTCGTGCTTATGATTGTTCCTTGAATTGGTCGCGTCGCTGAAATTTAATAGCTGTGTTTGTGTTCGATACGCGTCATTGAATAGGGGTGCTGTTGTTCTCTCTGATCGATGTTTTAGTATGTCTTGAAACTCTATGATTTTCCCAATTTCTTGCACTTTCTTCCTGTTTAATTGCTTCTGCTGTGGTCCCTGCTCGTCTTGGTCGCAGTTTATATTGGGTTCAGTAGTCCAGTTTATATCTGATTGTTCATAGTGTTTTTTCATTTATTGCCATCTTAGCTATCAATTTAAGCACCCATAACCAGCGATACGACATCTTTGACTCCCTTGCCTTCATTGAGTATATCTTTTTCCTAACTTTAGTTGAAATCTTTAGTTTAATATTTTTGTCCTGTCCTTATGACCATTGACAAAAATAAGTCACTCCTTTAATGAATACTATTTGATTTTTTTGATATATTTATCATTTGTATATTATGGTTCATATTTAACAAGGATTATATTATCAGGACTCGTTTGGATCAGAACATTTAATCCCAGATAATGAGGACAAGGATGAGTCTGATGTTCTCATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGACAAACATATACTGAGAGGTGTGAGCTTCAAGGTGATTCACATTTCTGCATATTTAGTTCATTTCATTTTTCAGTTTTATGCAATTTCTTTCTTTTGATATATAGATATAAGCGATTTCTTTTTGGCCAGAAAAGAAGGTATTAGATGAACATTCAGTTCTTGAGTAAAAGGGGGATATCTAAGTACAAGTGTTCTATGTCGCTTATATATGTGTCTGAATGTGCTACTTTGAATTCTAATTTAATAAAGTTTGCTTAATCTTATTAGTGTTTTTTAAGTTACACTGTTATGGAAATGAAAATATTGTACTGTTTTTTTTTTTATCAGATTATCTAATAAATTGTTGTCGTTGATATAAGTTTTAATCTCATGAAAAAACTGTAAAATAATTCTTGTCGACTCTCCCCCATGGATGTGGTAATCAAATGGAACCTTGTAGGTTCTTGGTAGTCATTGAGTGGAATGAGGTGGAAGGGTTGTGATTGTTGCAGTTCCAAATACATTTTTCTGCTATAAGTGAACTTTCTTTTGAGCCTTCATGGATGTTCCTCTTCCTCTTTTCTTTGGTTTTTTCATGTATATTCATGTCAATGACCATAGCTTTGGAAATGCTCTAGTTGTTTGGTCATCTTTTCTTCAATTTCCAACAATCAACTTAATCATGGAGTCGTGATTCTGGCTGTTGGGTATAGTCTGTTTACAGGGTTTTGACCTGAGGATACAGGTTGTATAACATTTGTTTTTAACCATGCCTTTCCTTGGTTACATAGTGTGACAGATAATGAAAAATGGAGTAACGAAGACTTATACAATGCTTCAAGTTGTTGTTGGATGTTTAATTATTAGAAAAGTTCGTTACATGACACCGAGAGTGTAGGAATGGGACAACTTTTGTAAGATTGATGATTTTAATGCTCTACTGATAGACTCAATAATATAGTAGTTGGATAGGTTGGGTTAGTTTTTTTGTTAGATCTCTATTGACTTTTTGGTGTCTGGGGATAGCCATAAATCTTGAACTTTGTAAGTTTATTTGGAAGAAAAGTTTCTTAGTAAGTTCAGAATCTTCTATTGGTAATGTAATGGGATTTAGGATAACTTGGTTTAATTCCTTGATTAATTCTTTTTTTACTATTTTAGAAATTAATTTCCTTTTAGTTATCCTTTTAGGATTTGTTCTTACATTTTATTCTATATAAATAGAGAATCCTCCCTCTTGTATTAGACGACTTTCATAATAATAAAGATTTGATTAGATTCTTAGAGAGAATTCTCCTTTTTATCTCTTTAGGCTACATCAATTTGGTATCAGAGTAGCCTTATGGGCCAACGTTGACTGCCACTGGTGGAAGACCGGGAAACTCTTGGTGATGCTGATCGCAAGAGGGAGCTTTGTGAGTTGTGCTCGTTGCCAAACAACACACATCTAACTAGGAGGAACCCTTTAAATTCAAGAAGAACGAGAAGAAATTTGAAGAATTATCCAAAAATGGAACTTTATAGTAGAACTAATACATTAAGGGGCAAAAATCATTATTTTGGTTATGGAGAACAATCAAGAAAGGTTGAAACATATTCAAGAAAACCCAAGAATCAGTCCTACAATAATTATTATCAGTCTGTCTTAACAATGTATTTACACAGTAATGACAGTTTTAACAACTAAAAGCTCCTCTCTGGATTACCTTGTATGGAGCAAGCTTGTCTTTAGCCCATGTGGGGAGTTCATGTAAGCTCATAGTAGGCTTGGACTCATCAGGTGTCATCATTTTTGTGTTAGGCTGAAGCACAATAATTGCACAAACACGTTCTCCATAGTCTTTGTCTAGTAATCCCAACGCACAACATTCTATGACAGACAGATGCTGCACAAAGTGATTTGGCTGGTGGTCATTTCATGTTCTTTATACTTCCTTTTTTGTGGTAGGTGTGGGGGTTGTCTTTCACTTTCCATGAGGGAGAGAGAGAGTACAAAGGAGAACGATGGGGTAACCTACAAAATCACTGATTCAATCTCTAATGCTGATAATTTATATCCTCCGACTTTCATGATATCAGTGCTCAGACCTGAAAACAGCCAAGAATGTGGAAAACAGAGTCGGGAATGCTCCTCCCAAAACAAAAGCAAGCAGAACTCGATCGAATAGCGATCAAATGAGAAGGGGCAAGTGAAAAATGACAAATAGGAGTAAAAAAAGAGGTGGGGTAATTAAATGCAGAAGAGTTCATGAAGAAAGGATATGTAAATGGGTATTGGCAATCTGGGATTTTGATTTTGTTTCTCAACTTTTGTGGTTTTGAAATTCAAGTAATGGGAGTTAGTGATGCCATCTTACACAATGGGGTAATGGAAGGAGTTCTCTTCTGGATTCCCCAGAATTAGGGCATACGCATAACAAAGGTCAATACAATACAGATGCGGCCATCAAACATCAAAGGAAAATCAGTGGCATCGCTGCCATTTTTGTGAACTTCTGCTTACCTTCCACCAAGAACTACCGATTCATTTAAGGAATTGATTCACTCGAAGCTATGGCGATTCGGGATAGTTTGGAGATGGCAAAGGAAGCCTACGAGGTTGAAACTTATTCAAGAACACCCAATTTGTACATCAATCCTGAAGTATTGGAGGAAATGAAAAAGAGAGTAAAAGAGATCCGAGGTTTGTTAGGAAAGATGACTCAAAACATGGATCAACTTTCAAAACAATGGCAAGAGTTCAAAAAAGAAATAATTCAAGAAAATCAAAACCAAGAGCTTGTGTTGGATGAAGAAAAATCTGATAGGACTCACACGGAGGTTGCTCAATTCAAACTAGATGATGAGGAACAATTAATCGATGAAAATAAAGATGGAGTTGTTGGAGAAGATGAAGCCACTACAGAGAATGTGTCCAAGATTAATTAACTGAGGCACACAACCAACCACAACTACCTCCACCGCAAGAGAGTAAAGCAAAAATTAACCTTGGCCACCAAGAAAGACAACAAAAGAATCAATAGCACCAATGGTATGCAAGAAATGTTTAAGATTTACCAAGAATCGTTCAAGAACAACCAAGATTAAGGATTTGATTTGATTCTTGGAGAGAATTCTCCTTTTATTTCTTTAGGCTACATCAATTGGTCCATTACCCTTGGTGGTATTATTACTATGGATGTGGCCCATTGGAGAAATTTGATTAGAATCCTCTTGTCAATTGTTGTGTTCTGTGCAGAAATTAGGAGGATTTTGATCGCTTATTCCCTTCCTGCCCCTCTTCTATGAGATTATGGTGGAATATGTTTGAGTATTATTTGTTAGGTCTTATTTTGTTAGATTGGAGACATTATTTCTAGGGTGCTCTCTTTTGTTGGCTTGGCTTTTGTATGCCTCTATATTCTTTCATTTCTTCTCAATGAAAGTTGGTCTTTATACCAAAAAAAAAATGGTGAAATATGTTTGATGTTTCTCACTTCTTAGTGGCCGTTCAGAGGAATACAGGAAAAAAAATGAAGGGTAAAGGAAAGTTGTTTAGCTTTGTTGCATCTTTTTTTTTTCCTTGGGAAACTTTGATTGACAGAAATAGAATACTATTTCATGACGGTGAGAGGCAGCTGGAGGATGTTTGAGATGTAATCATTTGCTTGGTGGTTCTGTTTCTATCCAGTTTTTTCCAGTTCTATAACTACTTTTATCATTGCAAATGAGTAAAATTTTCATGCAATCCCCGTACCTCTACTTCAAGGGTTTTCATCTTTTTTGTATTCCGACAAAATGTGGTTCCTACTTTAAAAAGCAAAAAATTCATCATTAGCTAACTTTCTGACAGTTTAGCAACTTGAAAGAAGAAACAACCTTGGAAGGGGATAAATGGTCAGCTTGTTGTCAGTACAGAAGTATGTATGTTTATATCATATATTCTTTCTTTTATGTGGATTCGCTTCAAAGACACGTGGTGCTGAGAAAGTAGGAAATTTTGGGTTTGATCAATGGTTATTTCCAGGGTTGTTTCCCTTCTCTGTTGTAATTACTAATTGCATCTCATGTAGTGTTTTCTAGCTTTTCTTCAGCTTCATTTGCCACACTACAGAAAAGAATACTAATCACCTTACACCAAGATTCTCACAGCTCTTCTATCATCTTTATCTCTGGTTTTATATTTAGTAATTTTTGTTATCTTTAAAAATATTTCATCTTCTCTCTCATTTTTATTTGTATAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGTAAATAATTGTCTTTGATTTCACATTGCATTTTGCTGATGTTTAGTTGCACCATACATATTCCAGATTTCCAGGCATTTATCGTTCTCTTAATTGGATTTCTGGTATTGCGAACAGGGAGAGGTATATATTCGAGGTAGAAAGCGAGTTGGTTTGATCGATGATGAGGAGCTATCTGGTCTTCGAATTGGATTGGTTAGAATTGTCTTTAACTTAATATAATTCTAGAAGTTATATGAAAAATGACTTTTTAATAGAAATATGTGACAATACCGTGAGGACAGAAAATATACCTGACTTAATCTAAAAATTGTGAAAAGGTTATTAGGTTCAATTTTAGAAATCGAAGAATTGTAGAAAGCTTTAATAGGTTACCTTTTTGGTGTTTCAAATTCCATTTTCTTTCTACTAATTACTTTCTTTTCTGAATTTCATTATTAAGCAGATGTGATGTTATTAACTGACTTGCTAAATAATAAATCATTTTAACTATTTAACTATAATTTTTTCTTTGAGAAACCCAACTTTCATTTAGGATAAAATGAAAGGATACAAGGCATACAAAAATGACAACCCAACCAGAGAGGCCAAGCACCTAGGTATACGAAAGGGGCCTACAATTCAACATAATCAATGCTTATCAGGGTGCTTACAAAAATCAATCATTACTATAGCTCAAATAGATGTCTTAAACCTAGTTAACAATCACGCCTCCTCCTAGGTCTCTCCTGATCCTTGAAGTGTCTATTATTCCCTTCATCCAAATACTTCAAAGGACAACAAAGAGACAGGCCCGCCACAAAAACCAACCCTGAAAAGGCTAATATGTTGAAGAATCTCTTTAACATAGAGTTACAACCTCTGCTCCTATTTAAACGTAAATATAAAATCCAATCTATGTAATAAATGTAGATTTTTTTTAATTAATTGAAAATATAGTACATGAATCAGGCGGACAAGTAAACTTTCATATTTGAATATGTAAAATTTTTTCTGAACAACTATTTTGACACTATTATGTCATTAGAATACTATCAAGATACTATGATGTAATAGGATTTAGGATAACTTGGTTTAATTCTTTTATTACTATTTTAGAAATTAGTTTCCTTTTAGTTATCCTTTTAGGATTCTTTCTTGCATTTTATTCTCTATAAATAGAGAATCCTCCCTCTTGTATTAGACACTTTTTATAATAATAAAGATTTGATTGGATTCTTGGAGAGAATTCTCCTTTTATCTCTTTAGGCTACATCAATTTGGTATCAAAGCAGCTGTTTGGGTCAATGTTGATTGCTGCCGGTGAAAGATTAAGAAACTCTTGGCGACGCCGATCACAAGAGGGAACTTCGTGAGTTGTGCTCGTTGCCAAACAACACACACCTAACTAGGGGGAACCCTTTAAATTCAAGAAGATCGAGAAGAAATTTGAAGAATCATCCAAGAATGGAATTTTATAGTAGAACTAATACATTAAGGGGCGAAAATCATTATTTTGGTTATGGAGAATGACCAAGGAAGGTTGAAACATATTCAAGAAAACCCAAGAATCAGTCCTACAACAATTATGAGGTTAAAACTTATTCAAGAACACTCAATTTGTACATCAATCCTGAAGTATTGGAGGAAATGAAGAAGGGAGTAAAAGAGATCCAAGGTTTGTTAGGAAAGATGACTCAAAACATGGATGAACTTTCAAAACAATGGCAAGAGTTCAAAAAAGAAATAATTCAAGAAAATCAAAATCAAGAACTTGTGTTGGAAGAAGAAAAAGTCGATGGGACTGGCACGAAGGTTGCTCATTTTGAACCAGTTCATGAGGAACAATTAATCGATGAAAACAAAGATGGAGGTGTTGAAGAAGATGAAGCCACTGTAGAGAATGTGTCCATTCGGTTAGATCAATTAACTGAGGCACACAACCAACCACAACCACCTCCATCGCAAGAGAATAGAGCATAA

mRNA sequence

GGGGGGGGGGGGGTTTCGCTCATAACCCTATTTTGGTTTCTTTAGATTTGTGAAGTTTCGATTGCATTGAAACTACTAAGTCAGTAGGAGGCTGATTTTGGACTGGTTGAATCGTGGGTCAGCTTCAAAATCTCAAAATTCATCTACCCTTTAACGGGTCAATCCCGGTAACATGGTTTCTGTATCGGGTTCGGTGTTCTTCCCATTAACTGTACCCAATTGTTCCTCTCGATCGCGTAAAGTATCTGTTCTTGATGCGCACAATTCTTTTTATTGTAAGAAAAAGGACCAGAGAAGGATTGTTTGCAATTGCATTGCGCCTCCGCCGTACTTCAAGAGTGATGGATCATCTGCCGTAAATTCCAATGACTCGTTTGGATCAGAACATTTAATCCCAGATAATGAGGACAAGGATGAGTCTGATGTTCTCATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGACAAACATATACTGAGAGGTGTGAGCTTCAAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGGAGAGGTATATATTCGAGGTAGAAAGCGAGTTGGTTTGATCGATGATGAGGAGCTATCTGGTCTTCGAATTGGATTGGTTGCTCATTTTGAACCAGTTCATGAGGAACAATTAATCGATGAAAACAAAGATGGAGGTGTTGAAGAAGATGAAGCCACTGTAGAGAATGTGTCCATTCGGTTAGATCAATTAACTGAGGCACACAACCAACCACAACCACCTCCATCGCAAGAGAATAGAGCATAA

Coding sequence (CDS)

ATGGTTTCTGTATCGGGTTCGGTGTTCTTCCCATTAACTGTACCCAATTGTTCCTCTCGATCGCGTAAAGTATCTGTTCTTGATGCGCACAATTCTTTTTATTGTAAGAAAAAGGACCAGAGAAGGATTGTTTGCAATTGCATTGCGCCTCCGCCGTACTTCAAGAGTGATGGATCATCTGCCGTAAATTCCAATGACTCGTTTGGATCAGAACATTTAATCCCAGATAATGAGGACAAGGATGAGTCTGATGTTCTCATTGAGTGTAGAAATGTCTACAAATCCTTTGGAGACAAACATATACTGAGAGGTGTGAGCTTCAAGATTAGACATGGAGAAGCTGTGGGAGTAATTGGGCCTTCTGGTACTGGGAAGTCTACAATACTGAAGATCATTGCAGGTCTTCTTTCTCCAGACAAGGGAGAGGTATATATTCGAGGTAGAAAGCGAGTTGGTTTGATCGATGATGAGGAGCTATCTGGTCTTCGAATTGGATTGGTTGCTCATTTTGAACCAGTTCATGAGGAACAATTAATCGATGAAAACAAAGATGGAGGTGTTGAAGAAGATGAAGCCACTGTAGAGAATGTGTCCATTCGGTTAGATCAATTAACTGAGGCACACAACCAACCACAACCACCTCCATCGCAAGAGAATAGAGCATAA

Protein sequence

MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIVCNCIAPPPYFKSDGSSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDENKDGGVEEDEATVENVSIRLDQLTEAHNQPQPPPSQENRA

Homology

[Close]

BLAST of Lsi06G007230 vs. ExPASy Swiss-Prot
Match: Q9AT00 (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TGD3 PE=1 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 8.7e-42
Identity = 88/143 (61.54%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 40  QRRIVCNCIAPPPYFKSDGSSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDK 99
           +R++ C CIAPP    +D +   +   S G   +  +   +++SDVLIECR+VYKSFG+K
Sbjct: 40  RRKVSCCCIAPPQNLDNDATKFDSLTKSGGG--MCKERGLENDSDVLIECRDVYKSFGEK 99

Query: 100 HILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEEL 159
           HIL+GVSFKIRHGEAVGVIGPSGTGKSTILKI+AGLL+PDKGEVYIRG+KR GLI DEE+
Sbjct: 100 HILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEI 159

Query: 160 SGLRIGLVAHFEPVHEEQLIDEN 183
           SGLRIGLV     + +   + EN
Sbjct: 160 SGLRIGLVFQSAALFDSLSVREN 180

[Close]

BLAST of Lsi06G007230 vs. ExPASy Swiss-Prot
Match: P55476 (Nod factor export ATP-binding protein I OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=nodI PE=3 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.0e-13
Identity = 43/112 (38.39%), Postives = 64/112 (57.14%), Query Frame = 0


Query: 72  HLIPDNE-DKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILK 131
           H   DN   + +SDV IE  NV KS+GDK ++  +SF I  GE  G++GP+G GKST+ +
Sbjct: 29  HSNADNSLSRSKSDVAIELTNVSKSYGDKVVVDQLSFTITSGECFGLLGPNGAGKSTVSR 88

Query: 132 IIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDEN 183
           ++ GL  PD+G + + G     +     L+  RIG+V  F+ +  E    EN
Sbjct: 89  LVLGLAPPDEGTITVLGEP---VPARARLARSRIGVVPQFDTLDREFTAREN 137

[Close]

BLAST of Lsi06G007230 vs. ExPASy Swiss-Prot
Match: O52618 (Nod factor export ATP-binding protein I OS=Rhizobium meliloti (strain 1021) OX=266834 GN=nodI PE=3 SV=3)

HSP 1 Score: 75.5 bits (184), Expect = 8.5e-13
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 0


Query: 85  VLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVY 144
           V I+  +V KS+GDK ++ G+SF +  GE  G++GP+G GKSTI ++I G+ +P  GE+ 
Sbjct: 35  VAIDVASVTKSYGDKPVINGLSFTVAAGECFGLLGPNGAGKSTITRMILGMTTPGTGEIT 94

Query: 145 IRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDEN 183
           + G   V +     L+ +RIG+V  F+ +  E  + EN
Sbjct: 95  VLG---VPVPSRARLARMRIGVVPQFDNLDLEFTVREN 129

[Close]

BLAST of Lsi06G007230 vs. ExPASy Swiss-Prot
Match: P72335 (Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain N33) OX=103798 GN=nodI PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.2e-12
Identity = 39/100 (39.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 83  SDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGE 142
           S V I+   V KSFGDK ++ G+SF +  GE  G++GP+G GKSTI +++ G+  PD G+
Sbjct: 2   SKVAIDLAGVKKSFGDKLVVNGLSFTVASGECFGLLGPNGAGKSTIARMLLGMTVPDAGK 61

Query: 143 VYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDEN 183
           + + G + VG      L+   IG+V  F+ + +E  + EN
Sbjct: 62  ITVLG-EPVGA--RSRLARKSIGVVPQFDNLDQEFTVREN 98

[Close]

BLAST of Lsi06G007230 vs. ExPASy Swiss-Prot
Match: P26050 (Nod factor export ATP-binding protein I OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=nodI PE=3 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 7.2e-12
Identity = 35/100 (35.00%), Postives = 61/100 (61.00%), Query Frame = 0


Query: 83  SDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGE 142
           S++ I+   V KSFGDK I+  +SF +  GE  G++GP+G GKSTI +++ G++SPD+G+
Sbjct: 4   SNMAIDLVGVRKSFGDKVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGK 63

Query: 143 VYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLIDEN 183
           + +       +      + +R+G+V  F+ +  E  + EN
Sbjct: 64  ITVLDEP---VPSRARAARVRVGVVPQFDNLEPEFTVREN 100

[Close]

BLAST of Lsi06G007230 vs. ExPASy TrEMBL
Match: A0A1S3B8N5 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487240 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 3.8e-80
Identity = 162/207 (78.26%), Postives = 175/207 (84.54%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIV-CNCIAPPPYFKSDGS 60
           MVS+SGSVFFPLTVPNCSSRSRKV+VLDAHNSF CK KDQRRIV CNCIAPPPYFKSD S
Sbjct: 1   MVSISGSVFFPLTVPNCSSRSRKVAVLDAHNSFCCKIKDQRRIVACNCIAPPPYFKSDES 60

Query: 61  SAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIG 120
           SAVNSNDSF SEHL  +NEDKDESDVLIECRNV+KSFG+KHILRGVSFKIRHGEAVGVIG
Sbjct: 61  SAVNSNDSFRSEHLSSENEDKDESDVLIECRNVHKSFGEKHILRGVSFKIRHGEAVGVIG 120

Query: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLI 180
           PSGTGKSTILKIIAGLLSPDKGEVYIRGRKR+GLIDDEELSGLRIGLV     + +   +
Sbjct: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRIGLIDDEELSGLRIGLVFQSAALFDSLTV 180

Query: 181 DENKDGGVEEDEATVENVSIRLDQLTE 207
            +N            EN S+  DQ++E
Sbjct: 181 RQN------VGFLLYENSSLSEDQISE 201

[Close]

BLAST of Lsi06G007230 vs. ExPASy TrEMBL
Match: A0A0A0LY39 (ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G659590 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.4e-79
Identity = 161/207 (77.78%), Postives = 175/207 (84.54%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIV-CNCIAPPPYFKSDGS 60
           MVSVSGSVFFPLTVP+CSSRSRKV+V+DAHNSF CK KDQRRIV CNCIAPPPYFKSD S
Sbjct: 1   MVSVSGSVFFPLTVPSCSSRSRKVAVIDAHNSFCCKIKDQRRIVACNCIAPPPYFKSDES 60

Query: 61  SAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIG 120
           SAVNSNDSF SEHL  +NEDK+ESDVLIECRNV+KSFG+KHILRGVSFKIRHGEAVGVIG
Sbjct: 61  SAVNSNDSFRSEHLSSENEDKNESDVLIECRNVHKSFGEKHILRGVSFKIRHGEAVGVIG 120

Query: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLI 180
           PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLV     + +   +
Sbjct: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVFQSAALFDSLTV 180

Query: 181 DENKDGGVEEDEATVENVSIRLDQLTE 207
            +N            EN S+  DQ++E
Sbjct: 181 RQN------VGFLLYENSSLSEDQISE 201

[Close]

BLAST of Lsi06G007230 vs. ExPASy TrEMBL
Match: A0A6J1F2M5 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111439208 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.4e-79
Identity = 153/182 (84.07%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIVCNCIAPPPYFKSDGSS 60
           MVS+SGSVFFPLTVP+CSSRSRKV+VLD HNSF  KKKDQRRIVCNCIAPPP+FKSDGSS
Sbjct: 1   MVSISGSVFFPLTVPDCSSRSRKVAVLDNHNSFCLKKKDQRRIVCNCIAPPPFFKSDGSS 60

Query: 61  AVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGP 120
            VN NDSF SEHL  DNE +DESDVLIECRNVYKSFG+KHILRGVSFKIRHGEAVGVIGP
Sbjct: 61  TVNFNDSFTSEHLSRDNEGEDESDVLIECRNVYKSFGEKHILRGVSFKIRHGEAVGVIGP 120

Query: 121 SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLID 180
           SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLV     + +   + 
Sbjct: 121 SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVFQSAALFDSLTVR 180

Query: 181 EN 183
           +N
Sbjct: 181 QN 182

[Close]

BLAST of Lsi06G007230 vs. ExPASy TrEMBL
Match: A0A6J1KHV9 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111495932 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.6e-78
Identity = 154/186 (82.80%), Postives = 164/186 (88.17%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIVCNCIAPPPYFKSDGSS 60
           MVS+SGSVFFPLTVP+CSSRSRKV+VLD HNSF  KKKDQRRIVCNCIAPPP+FKSDGSS
Sbjct: 1   MVSISGSVFFPLTVPDCSSRSRKVAVLDNHNSFCLKKKDQRRIVCNCIAPPPFFKSDGSS 60

Query: 61  AVNSNDSFGSEHLIPDN----EDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVG 120
            VN NDSF SEHL  DN    ED+DESDVLIECRNVYKSFG+KHILRGVSFKIRHGEAVG
Sbjct: 61  TVNFNDSFTSEHLSRDNEDEDEDEDESDVLIECRNVYKSFGEKHILRGVSFKIRHGEAVG 120

Query: 121 VIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEE 180
           VIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLV     + + 
Sbjct: 121 VIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVFQSAALFDS 180

Query: 181 QLIDEN 183
             + +N
Sbjct: 181 LTVRQN 186

[Close]

BLAST of Lsi06G007230 vs. ExPASy TrEMBL
Match: A0A6J1CBM2 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111010089 PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 1.7e-77
Identity = 151/182 (82.97%), Postives = 163/182 (89.56%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIVCNCIAPPPYFKSDGSS 60
           MVS+SGSV FPLT PNCSS SRKV+VLDA NSF  KKK+QRRIVCNCIAPPPYFKSD SS
Sbjct: 1   MVSISGSVLFPLTAPNCSSGSRKVAVLDASNSFCFKKKEQRRIVCNCIAPPPYFKSDESS 60

Query: 61  AVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGP 120
           AVNSNDSF SE+LIPDNE +DESDVLIECR+VYKSFG+KHILRGVSFKIRHGEAVGVIGP
Sbjct: 61  AVNSNDSFRSENLIPDNEHEDESDVLIECRDVYKSFGEKHILRGVSFKIRHGEAVGVIGP 120

Query: 121 SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLID 180
           SGTGKSTILKIIAGLL+PDKGEVYIRGRKRVGLIDDEE+SGLRIGLV     + +   + 
Sbjct: 121 SGTGKSTILKIIAGLLAPDKGEVYIRGRKRVGLIDDEEISGLRIGLVFQSAALFDSLTVR 180

Query: 181 EN 183
           EN
Sbjct: 181 EN 182

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: XP_038876767.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 317.4 bits (812), Expect = 9.8e-83
Identity = 160/183 (87.43%), Postives = 168/183 (91.80%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRI-VCNCIAPPPYFKSDGS 60
           MVS+SGSVFFPLTVPNCS+RSRKV+VLDAHNSF CKKKDQRRI VCNCIAPPPYFKSDGS
Sbjct: 1   MVSISGSVFFPLTVPNCSARSRKVAVLDAHNSFCCKKKDQRRIVVCNCIAPPPYFKSDGS 60

Query: 61  SAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIG 120
           SAVNSNDSF SEHL PDNEDKDESDVLIECRNVYKSFG+KHILRGVSFKIRHGEAVGVIG
Sbjct: 61  SAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKHILRGVSFKIRHGEAVGVIG 120

Query: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLI 180
           PSGTGKSTILKIIAGLLSPDKGEVYIRGRKR GLIDDEELSGLRIGLV     + +   +
Sbjct: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRFGLIDDEELSGLRIGLVFQSAALFDSLTV 180

Query: 181 DEN 183
            +N
Sbjct: 181 RQN 183

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: XP_038876768.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 315.8 bits (808), Expect = 2.9e-82
Identity = 158/167 (94.61%), Postives = 162/167 (97.01%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRI-VCNCIAPPPYFKSDGS 60
           MVS+SGSVFFPLTVPNCS+RSRKV+VLDAHNSF CKKKDQRRI VCNCIAPPPYFKSDGS
Sbjct: 1   MVSISGSVFFPLTVPNCSARSRKVAVLDAHNSFCCKKKDQRRIVVCNCIAPPPYFKSDGS 60

Query: 61  SAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIG 120
           SAVNSNDSF SEHL PDNEDKDESDVLIECRNVYKSFG+KHILRGVSFKIRHGEAVGVIG
Sbjct: 61  SAVNSNDSFRSEHLSPDNEDKDESDVLIECRNVYKSFGEKHILRGVSFKIRHGEAVGVIG 120

Query: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGL 167
           PSGTGKSTILKIIAGLLSPDKGEVYIRGRKR GLIDDEELSGLRIGL
Sbjct: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRFGLIDDEELSGLRIGL 167

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: XP_008443718.1 (PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 7.8e-80
Identity = 162/207 (78.26%), Postives = 175/207 (84.54%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIV-CNCIAPPPYFKSDGS 60
           MVS+SGSVFFPLTVPNCSSRSRKV+VLDAHNSF CK KDQRRIV CNCIAPPPYFKSD S
Sbjct: 1   MVSISGSVFFPLTVPNCSSRSRKVAVLDAHNSFCCKIKDQRRIVACNCIAPPPYFKSDES 60

Query: 61  SAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIG 120
           SAVNSNDSF SEHL  +NEDKDESDVLIECRNV+KSFG+KHILRGVSFKIRHGEAVGVIG
Sbjct: 61  SAVNSNDSFRSEHLSSENEDKDESDVLIECRNVHKSFGEKHILRGVSFKIRHGEAVGVIG 120

Query: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLI 180
           PSGTGKSTILKIIAGLLSPDKGEVYIRGRKR+GLIDDEELSGLRIGLV     + +   +
Sbjct: 121 PSGTGKSTILKIIAGLLSPDKGEVYIRGRKRIGLIDDEELSGLRIGLVFQSAALFDSLTV 180

Query: 181 DENKDGGVEEDEATVENVSIRLDQLTE 207
            +N            EN S+  DQ++E
Sbjct: 181 RQN------VGFLLYENSSLSEDQISE 201

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: KAG6588286.1 (Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79
Identity = 154/182 (84.62%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIVCNCIAPPPYFKSDGSS 60
           MVS+SGSVFFPLTVP+CSSRSRKV+VLD HNSF  KKKDQRRIVCNCIAPPP+FKSDGSS
Sbjct: 1   MVSISGSVFFPLTVPDCSSRSRKVAVLDNHNSFCLKKKDQRRIVCNCIAPPPFFKSDGSS 60

Query: 61  AVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGP 120
            VN NDSF SEHL  DNED+DESDVLIECRNVYKSFG+KHILRGVSFKIRHGEAVGVIGP
Sbjct: 61  TVNFNDSFTSEHLSRDNEDEDESDVLIECRNVYKSFGEKHILRGVSFKIRHGEAVGVIGP 120

Query: 121 SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLID 180
           SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLV     + +   + 
Sbjct: 121 SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVFQSAALFDSLTVR 180

Query: 181 EN 183
           +N
Sbjct: 181 QN 182

[Close]

BLAST of Lsi06G007230 vs. NCBI nr
Match: XP_023520683.1 (protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-79
Identity = 154/182 (84.62%), Postives = 164/182 (90.11%), Query Frame = 0


Query: 1   MVSVSGSVFFPLTVPNCSSRSRKVSVLDAHNSFYCKKKDQRRIVCNCIAPPPYFKSDGSS 60
           MVS+SGSVFFPLTVP+CSSRSRKV+VLD HNSF  KKKDQRRIVCNCIAPPP+FKSDGSS
Sbjct: 1   MVSISGSVFFPLTVPDCSSRSRKVAVLDNHNSFCLKKKDQRRIVCNCIAPPPFFKSDGSS 60

Query: 61  AVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGP 120
            VN NDSF SEHL  DNED+DESDVLIECRNVYKSFG+KHILRGVSFKIRHGEAVGVIGP
Sbjct: 61  TVNFNDSFTSEHLSRDNEDEDESDVLIECRNVYKSFGEKHILRGVSFKIRHGEAVGVIGP 120

Query: 121 SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVAHFEPVHEEQLID 180
           SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLV     + +   + 
Sbjct: 121 SGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEELSGLRIGLVFQSAALFDSLTVR 180

Query: 181 EN 183
           +N
Sbjct: 181 QN 182

[Close]

BLAST of Lsi06G007230 vs. TAIR 10
Match: AT1G65410.1 (non-intrinsic ABC protein 11 )

HSP 1 Score: 171.8 bits (434), Expect = 6.2e-43
Identity = 88/143 (61.54%), Postives = 109/143 (76.22%), Query Frame = 0


Query: 40  QRRIVCNCIAPPPYFKSDGSSAVNSNDSFGSEHLIPDNEDKDESDVLIECRNVYKSFGDK 99
           +R++ C CIAPP    +D +   +   S G   +  +   +++SDVLIECR+VYKSFG+K
Sbjct: 40  RRKVSCCCIAPPQNLDNDATKFDSLTKSGGG--MCKERGLENDSDVLIECRDVYKSFGEK 99

Query: 100 HILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYIRGRKRVGLIDDEEL 159
           HIL+GVSFKIRHGEAVGVIGPSGTGKSTILKI+AGLL+PDKGEVYIRG+KR GLI DEE+
Sbjct: 100 HILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAGLISDEEI 159

Query: 160 SGLRIGLVAHFEPVHEEQLIDEN 183
           SGLRIGLV     + +   + EN
Sbjct: 160 SGLRIGLVFQSAALFDSLSVREN 180

[Close]

BLAST of Lsi06G007230 vs. TAIR 10
Match: AT4G33460.1 (ABC transporter family protein )

HSP 1 Score: 58.9 bits (141), Expect = 5.9e-09
Identity = 30/75 (40.00%), Postives = 46/75 (61.33%), Query Frame = 0


Query: 80  KDESDVLIECRNVYKSFGDKH-----ILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAG 139
           K   +V +ECRN+  S   +      ILR  SF+I  G+   ++GP+G GKST+LKI+AG
Sbjct: 33  KFSDNVAVECRNLCFSVSTRQGISVPILRDCSFRIPSGQLWMILGPNGCGKSTLLKILAG 92

Query: 140 LLSPDKGEVYIRGRK 150
           +++P  G V++   K
Sbjct: 93  VVNPSSGTVFVEKPK 107

[Close]

BLAST of Lsi06G007230 vs. TAIR 10
Match: AT5G64840.1 (general control non-repressible 5 )

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 86  LIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYI 145
           ++  +N+   F DK + +  +  I  GE + ++GP+G GKST+LK+I GL  P KGEV +
Sbjct: 424 VVNVKNIDFGFEDKMLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVIL 483

[Close]

BLAST of Lsi06G007230 vs. TAIR 10
Match: AT5G09930.1 (ABC transporter family protein )

HSP 1 Score: 55.8 bits (133), Expect = 5.0e-08
Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 0


Query: 86  LIECRNVYKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEVYI 145
           ++  +N+   F DK +    +  I  GE V +IGP+G GKST+LK+I GL  P +GEV +
Sbjct: 410 VVTVKNLVFGFDDKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVIL 469

[Close]

BLAST of Lsi06G007230 vs. TAIR 10
Match: AT3G62150.1 (P-glycoprotein 21 )

HSP 1 Score: 54.3 bits (129), Expect = 1.4e-07
Identity = 43/116 (37.07%), Postives = 60/116 (51.72%), Query Frame = 0


Query: 87  IECRNV---YKSFGDKHILRGVSFKIRHGEAVGVIGPSGTGKSTILKIIAGLLSPDKGEV 146
           IE  NV   Y +  ++ I RG S  I  G  V ++G SG+GKST++ +I     P  GEV
Sbjct: 403 IELNNVNFSYPARPEEQIFRGFSLSISSGSTVALVGQSGSGKSTVVSLIERFYDPQSGEV 462

Query: 147 YIRGRKRVGLIDDEELSGLR--IGLVAHFEPVHEEQLIDENKDGGVEEDEATVENV 198
            I G      + + +L  +R  IGLV+  EPV     I EN   G  ++ ATVE +
Sbjct: 463 RIDGIN----LKEFQLKWIRSKIGLVSQ-EPVLFTSSIKENIAYG--KENATVEEI 511

The following BLAST results are available for this feature:

BLAST of Lsi06G007230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AT00	8.7e-42	61.54	Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Arabidopsis thaliana OX=...	[more]
P55476	5.0e-13	38.39	Nod factor export ATP-binding protein I OS=Sinorhizobium fredii (strain NBRC 101...	[more]
O52618	8.5e-13	38.78	Nod factor export ATP-binding protein I OS=Rhizobium meliloti (strain 1021) OX=2...	[more]
P72335	4.2e-12	39.00	Nod factor export ATP-binding protein I OS=Rhizobium sp. (strain N33) OX=103798 ...	[more]
P26050	7.2e-12	35.00	Nod factor export ATP-binding protein I OS=Bradyrhizobium diazoefficiens (strain...	[more]

BLAST of Lsi06G007230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8N5	3.8e-80	78.26	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 OS=Cucumis melo ...	[more]
A0A0A0LY39	5.4e-79	77.78	ABC transporter domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G65...	[more]
A0A6J1F2M5	5.4e-79	84.07	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like OS=Cucurbita moschata ...	[more]
A0A6J1KHV9	4.6e-78	82.80	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like OS=Cucurbita maxima OX...	[more]
A0A6J1CBM2	1.7e-77	82.97	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic OS=Momordica charantia OX=3...	[more]

BLAST of Lsi06G007230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876767.1	9.8e-83	87.43	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Benincasa hispi...	[more]
XP_038876768.1	2.9e-82	94.61	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X2 [Benincasa hispi...	[more]
XP_008443718.1	7.8e-80	78.26	PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic isoform X1 [Cucu...	[more]
KAG6588286.1	1.7e-79	84.62	Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic, partial [Cucurbita argyros...	[more]
XP_023520683.1	1.7e-79	84.62	protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic-like [Cucurbita pepo subsp....	[more]

BLAST of Lsi06G007230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65410.1	6.2e-43	61.54	non-intrinsic ABC protein 11	[more]
AT4G33460.1	5.9e-09	40.00	ABC transporter family protein	[more]
AT5G64840.1	2.2e-08	40.00	general control non-repressible 5	[more]
AT5G09930.1	5.0e-08	41.67	ABC transporter family protein	[more]
AT3G62150.1	1.4e-07	37.07	P-glycoprotein 21	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 187..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..221
None	No IPR available	PANTHER	PTHR43023:SF3	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC	coord: 2..167
None	No IPR available	PANTHER	PTHR43023	PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC	coord: 2..167
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 60..216 e-value: 3.4E-25 score: 90.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 82..156
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 102..204 e-value: 8.1E-16 score: 58.8

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G007230.1	Lsi06G007230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005524	ATP binding