Lsi06G007050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G007050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CRIB domain-containing protein
Location	chr06: 11302593 .. 11305428 (-)
RNA-Seq Expression	Lsi06G007050
Synteny	Lsi06G007050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCCAATTCCACTTCCTCAAAATGGGTTTTGATTTTTTTTTTCTTCTTTAAAAAATTAAAACCATTAGTTCATCTCTCTTTTTTTTTTTCTCCCTCTTTGAATGTGAAAAAAGAAGAAACAAAAAATGAGACGTAAAATGGAGAGATTGGTTCTTCTTCCCTTCTCAGTGGGATGTATCTCTGAATCAAGTGTTGCTGTGGGAATTCAACACAAATCAACAACTTCCAAACCACACTCCATCTCTTCTCCAACATCAAGTCTTTCTCTTTTCTCTCTTTCTTATTCTTTGATTTCTTTCTCGACCTCGGTCGGAGTTAGAATTTTTCTTAGAGAGAATAAAATTTTAGAATCTGTTTGATTTCTTATTCATAATGTTCAATTTCTTATTTCTAATGAATTAATTTGCCTAATTTTTTTTTTTTTTAGGTTTAGAATCTAAATTTGTAACTGTTTAAAGAGAGAAAAAATAAAATAGGGAATACAACGTTATTGTTTTAAATTACTAATTAACTAAATGTACTCTTACATTATAACGCTCTAGATATATAATTTGATTCTAAAAGATATAGGGGTGAAACGAAAAGAAAAAAAATAAAATTTTAAGTATTATTGTGTGTGTATATGCGCATATTTTTTTTCGAATTTACGAGAAATTGAGGTTTATTTTTGGTTTGAACTTACATGGAATTTTTTTTTCTTTTGGAAGAAGGTGAGAAAGATGAAGATGGGAAAGATGAAGTTGGAGGTGAAAACCTATTAGAGGAAAGCTTGAAGAACTCTCAGAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGGTGAGTTTAATTTTTATTTTTTTTTTTAGAAAATAACATATTCCAAATAACATTTTTTTTCTTTTTCTTTTTATTGTTTTTTCTTTGGAAGATGAAATTGGAATACTTTTGCCCTAGGTTGGTTTAGTTTGCTGTTCGAAATTTAGCTCTATTAGATAATTATTTGATTTTTTAAAATTAAGTTTATAGACATCACTCTCACTTTAAAAAAATTTATTTTGTTTTACATTCTAATAATATTTTCAAAAGTCAAGCCATTTTGGAAGGAAAAAAAGACGAAGAAGAAGTAGTTTTTTAAGAATTCAAACCTTTTCTTTTAAAAAGATGAAAAGTATGGTAATGGAATTGGGAGGAAATAAAAATTAAATTTCAAAGACAGATATCTAAGACTTAAATTGAGGAAAAATTATTATAAATAGAAAAAATATCAAACTATTTACAAATATAGAAAAATTTCACTATTTATCAGCGATAGAAGTCTAAAAATGAGTTAAACTATTTACAAGTATAGAAAATTTTTTCTGTCTATCAGTGATAGAAGTTTATTGTGGTCTATCGCTATAGACAATGAAATTGTTTTATACTTGTAAATAGTTTGACTCATTTTTCTATATTTGAAAGTCCTAACTTCTATGTTTAGTTATAATATTCTTTTAACAAAAAAAAATATAAAAACCATAGCCCAATTTTGAAAATAATGATTTTTCCCTCAATGGTTTCCATATTTTGTTTTGCACTTTTTAAAGCACTTGAAGTTCAAATTTAGAAACAAATACAAAATCTTGAAAACTACCCTCGTTTCCAAACTTTTCAATGTTAGTATATAGAAAAGAGAGTTGTAAATAAGAAATAGTTTCTACCAACAGAAAACTAAAACCAAAATGTTAATTATCAAATGGATTCGGCCATTTTTTATTGTTTTATTTTAGAAAAAAAAAAAGCCAAAAGTAAGTTTTACTTTCTAACAAATGCAAAATAAATATACAAAAAAAAAATTAAAAATGACATGAAAATTTTTAATATGTTATTTATAGAAAATTTATGTTCTTTTTTATCTCAATTTAGGGAAATTTTTTAAAATAGAAAAATATGAAAAATTATTTACACAAAATAACAAAATTTTTAGATAGTTGTAATAGACGCGGATAGAAGTCTATCAGGGTCTATCAGTGATATAAATGATAGAAATCTATCACTGATAGATGCCGATAGAAGTCTATTAATGTCTATCAGTATTTTTTTTTGCTATTTTCTGTAAATAGTTTGACATTTTCTCTATCTGTGAAAATTTTGCTTCTTTAATTCTTTTAAATTAATCAATACAAATTAATACTAAAGACGAAAAATGAGTATTTAATGAAAAATCAAGGTTAAAACTGTAAATCTCTTGAAATTTAGGGATCAAATTGAAACAAAGCTTAAATCTCAAGAGTACAACTGTAACAATTTGAAACCTAGGGACTAATTTTAAAGCAAACTCATAATTTAATGACTATAAGTGTAACATATTGAAATATATATGGACTAAATAGAAACTACACCCGAAATATAGGGATCAGAAACGTATGCATTCTATAAACCTATTAAACAAAAAGATTGATTCATGATCATTATAAATGAAAACCCTAATGTTTTTTTTTTCCTTTTGTGGGTAATAAAAGTGTACAAAGAAGAGATGGAAGAAATGGAAATGGATATGGAAATAGGAACTCCCACGGATGTGAAGCATGTGACACACATAGGATGTGATGCCACCACAAGAGATGATGCCAACTCTTTCATTGCTTGGGAAACTCTTTTAGCTTCTTCTTCTTGGAGGCAATTTGATGAACAACTTTCAAACCCTAAACATTTACCTAATATTTTAGGTCATTCCATTTGAATATCTCTCTATCTCCATATAATATTTCATCACTAGTTATGTTCAAACAAATGTATGGTGTTCTTGTTCTTGTTCTTTTTTTTTTT

mRNA sequence

TCCAATTCCACTTCCTCAAAATGGGTTTTGATTTTTTTTTTCTTCTTTAAAAAATTAAAACCATTAGTTCATCTCTCTTTTTTTTTTTCTCCCTCTTTGAATGTGAAAAAAGAAGAAACAAAAAATGAGACGTAAAATGGAGAGATTGGTTCTTCTTCCCTTCTCAGTGGGATGTATCTCTGAATCAAGTGTTGCTGTGGGAATTCAACACAAATCAACAACTTCCAAACCACACTCCATCTCTTCTCCAACATCAAAAGGTGAGAAAGATGAAGATGGGAAAGATGAAGTTGGAGGTGAAAACCTATTAGAGGAAAGCTTGAAGAACTCTCAGAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGTGTACAAAGAAGAGATGGAAGAAATGGAAATGGATATGGAAATAGGAACTCCCACGGATGTGAAGCATGTGACACACATAGGATGTGATGCCACCACAAGAGATGATGCCAACTCTTTCATTGCTTGGGAAACTCTTTTAGCTTCTTCTTCTTGGAGGCAATTTGATGAACAACTTTCAAACCCTAAACATTTACCTAATATTTTAGGTCATTCCATTTGAATATCTCTCTATCTCCATATAATATTTCATCACTAGTTATGTTCAAACAAATGTATGGTGTTCTTGTTCTTGTTCTTTTTTTTTTT

Coding sequence (CDS)

ATGAGACGTAAAATGGAGAGATTGGTTCTTCTTCCCTTCTCAGTGGGATGTATCTCTGAATCAAGTGTTGCTGTGGGAATTCAACACAAATCAACAACTTCCAAACCACACTCCATCTCTTCTCCAACATCAAAAGGTGAGAAAGATGAAGATGGGAAAGATGAAGTTGGAGGTGAAAACCTATTAGAGGAAAGCTTGAAGAACTCTCAGAGGTTCACAGCACTTGCAAAGCCTAATATTGGAGTTGGCTTTCATAGGCTTTACAAAGGTTTCAAGAACATCTCTCAATTATTTGTGTACAAAGAAGAGATGGAAGAAATGGAAATGGATATGGAAATAGGAACTCCCACGGATGTGAAGCATGTGACACACATAGGATGTGATGCCACCACAAGAGATGATGCCAACTCTTTCATTGCTTGGGAAACTCTTTTAGCTTCTTCTTCTTGGAGGCAATTTGATGAACAACTTTCAAACCCTAAACATTTACCTAATATTTTAGGTCATTCCATTTGA

Protein sequence

MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGENLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVKHVTHIGCDATTRDDANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI

Homology

[Close]

BLAST of Lsi06G007050 vs. ExPASy Swiss-Prot
Match: Q9FFD5 (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 7.8e-22
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MR +MERLV+LPFS+GCIS SSVAV     S  SKPH   S     E++E          
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV----LSPLSKPHHHHSRQVIREQEE---------- 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYK-EEMEEMEMD-MEIGTPTD 120
             E+++KN  +F A++KP I +G +R++K FK ISQLF  K EE EE+E   MEIG PT+
Sbjct: 61  --EDNMKNVFKFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTN 120

Query: 121 VKHVTHIGCDATTRDDANSFIAWETLL 146
           VKHV+HIG ++           WE L+
Sbjct: 121 VKHVSHIGWESGLTAATGPGKGWEDLI 131

[Close]

BLAST of Lsi06G007050 vs. ExPASy Swiss-Prot
Match: Q8GYU0 (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 2.2e-08
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 79  NIGVGFHRLYKGFKNISQLFV-YKEEMEEMEMDMEIGTPTDVKHVTHIGCDA--TTRDDA 138
           NI  G +R+ + FK+ S  F+ Y+EE +E E +MEIG PTDVKH++HIG D   TT D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of Lsi06G007050 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 3.9e-05
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 87  LYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVKHVTHIGCDATT 132
           +YKGFK ISQ+F  ++E +E    +EIG PTDVKHV HIG + ++
Sbjct: 8   IYKGFKCISQIFAVEKERDE----IEIGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of Lsi06G007050 vs. ExPASy Swiss-Prot
Match: Q1G3K8 (CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.5e-04
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 87  LYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVKHVTHIGCD 129
           L KG + ISQ+F  + E EE   +M+IG PTDVKHV HIG D
Sbjct: 13  LLKGLRYISQVFAIEGEKEE---EMQIGNPTDVKHVAHIGWD 51

[Close]

BLAST of Lsi06G007050 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.3e-04
Identity = 24/45 (53.33%), Postives = 29/45 (64.44%), Query Frame = 0


Query: 87  LYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVKHVTHIGCDATT 132
           L KG + I+Q+F      EE E +M+IG PTDVKHV HIG D  T
Sbjct: 8   LLKGLRYITQIF-----DEEKEQEMQIGFPTDVKHVAHIGSDGPT 47

[Close]

BLAST of Lsi06G007050 vs. ExPASy TrEMBL
Match: A0A1S3B8Q2 (CRIB domain-containing protein RIC4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487233 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.1e-82
Identity = 158/173 (91.33%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MRRKMERLVLLPFSVGCISE+SVAVGIQH STTSKPH ISSPTSKGEKDEDGK+E+G E 
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCER 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVK 120
            LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEM+MEIG+PTDVK
Sbjct: 61  SLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTR--DDANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI 172
           HVTHIGCDAT R  D ANSFIAWETLLASSSWRQFD+QLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATARSEDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173

[Close]

BLAST of Lsi06G007050 vs. ExPASy TrEMBL
Match: A0A0A0LY31 (CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G658520 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.0e-81
Identity = 158/172 (91.86%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MRRKMERLVLLPFSVGCISE+SVAVGIQH STTSKPH ISSPTS  EKDEDGK+E+G E+
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTS-SEKDEDGKEEIGCES 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVK 120
           LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEM+MEIG+PTDVK
Sbjct: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTRDD-ANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI 172
           HVTHIGCDATTR+D ANSFIAWETLLASSSWRQFD+QLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 171

[Close]

BLAST of Lsi06G007050 vs. ExPASy TrEMBL
Match: A0A1S3B9E6 (CRIB domain-containing protein RIC4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487233 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.9e-79
Identity = 156/173 (90.17%), Postives = 162/173 (93.64%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MRRKMERLVLLPFSVGCISE+SVAVGIQH STTSKPH ISSPTS  EKDEDGK+E+G E 
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTS-SEKDEDGKEEIGCER 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVK 120
            LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEM+MEIG+PTDVK
Sbjct: 61  SLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTR--DDANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI 172
           HVTHIGCDAT R  D ANSFIAWETLLASSSWRQFD+QLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATARSEDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of Lsi06G007050 vs. ExPASy TrEMBL
Match: A0A6J1DY77 (CRIB domain-containing protein RIC4-like OS=Momordica charantia OX=3673 GN=LOC111025632 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 8.8e-53
Identity = 130/181 (71.82%), Postives = 142/181 (78.45%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MRRKMERLVLLPFSVGCISESSVAVGIQ  +T+  P       S+GEK EDG  E G   
Sbjct: 1   MRRKMERLVLLPFSVGCISESSVAVGIQQTATSKLPR------SRGEKVEDG--EEGEGT 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEME-MDMEIGTPTDV 120
           LLEESLKNSQ+F+ALAKPNI VGFHRLY+GFKNISQLFVYKEEMEEME MDMEIG+PTDV
Sbjct: 61  LLEESLKNSQKFSALAKPNIAVGFHRLYRGFKNISQLFVYKEEMEEMEMMDMEIGSPTDV 120

Query: 121 KHVTHIGCD-ATTRDD------ANSFIA-WETLLASSSWRQFDE-QLSNPKHLPNILGHS 172
           KHVTHIGCD A+T DD       N FIA WETLL   +W QFD+ QLSNP  LPN++ HS
Sbjct: 121 KHVTHIGCDIASTIDDDNHNANNNPFIANWETLL---TWTQFDDHQLSNP--LPNVVHHS 168

[Close]

BLAST of Lsi06G007050 vs. ExPASy TrEMBL
Match: A0A6J1F000 (CRIB domain-containing protein RIC4 OS=Cucurbita moschata OX=3662 GN=LOC111441091 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 9.1e-50
Identity = 122/183 (66.67%), Postives = 132/183 (72.13%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MRRKMER VLLPFS+GCISESSVAVGIQ ++ TSKP   +S     EKD         E 
Sbjct: 1   MRRKMERFVLLPFSIGCISESSVAVGIQ-RNATSKPTDPNSSPRSSEKD---------EM 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVK 120
           +LEESLKNSQRFTALAKPNIGVGFHRLYKGFKN SQLFVYKEEMEEME +ME+G PTDVK
Sbjct: 61  VLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNFSQLFVYKEEMEEME-EMEVGCPTDVK 120

Query: 121 HVTHIGCDATT--RDDANSFIAWETLLASS--------SWR--QFDEQLSNPKHLPNILG 172
           H+THIGCDATT   D  N FI WETLLAS         SW   + D  LSN    PN+L 
Sbjct: 121 HLTHIGCDATTISDDPNNPFIDWETLLASGLFSLPSSRSWTELELDHHLSN----PNVLP 168

[Close]

BLAST of Lsi06G007050 vs. NCBI nr
Match: XP_038880090.1 (CRIB domain-containing protein RIC4-like isoform X1 [Benincasa hispida])

HSP 1 Score: 324.3 bits (830), Expect = 6.2e-85
Identity = 162/172 (94.19%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQH-KSTTSKPHSISSPTSKGEKDEDGKDEVGGE 60
           MRRKMERLVLLPFSVGCISESSVAVGIQH  ++TSKPH ISSPTSKGEKDEDGK+EVGGE
Sbjct: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHNNASTSKPHPISSPTSKGEKDEDGKEEVGGE 60

Query: 61  NLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDV 120
            LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYK+EMEEMEMDMEIG+PTDV
Sbjct: 61  TLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKDEMEEMEMDMEIGSPTDV 120

Query: 121 KHVTHIGCDATTRDDANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI 172
           KHVTHIGCDATTRDDANSFIAWETLLASSSWRQFD+QLSNPKHLPNILGHSI
Sbjct: 121 KHVTHIGCDATTRDDANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of Lsi06G007050 vs. NCBI nr
Match: XP_011660226.1 (CRIB domain-containing protein RIC4 isoform X3 [Cucumis sativus])

HSP 1 Score: 320.5 bits (820), Expect = 9.0e-84
Identity = 160/172 (93.02%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MRRKMERLVLLPFSVGCISE+SVAVGIQH STTSKPH ISSPTSKGEKDEDGK+E+G E+
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCES 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVK 120
           LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEM+MEIG+PTDVK
Sbjct: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTRDD-ANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI 172
           HVTHIGCDATTR+D ANSFIAWETLLASSSWRQFD+QLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 172

[Close]

BLAST of Lsi06G007050 vs. NCBI nr
Match: XP_038880092.1 (CRIB domain-containing protein RIC4-like isoform X2 [Benincasa hispida])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 160/172 (93.02%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQH-KSTTSKPHSISSPTSKGEKDEDGKDEVGGE 60
           MRRKMERLVLLPFSVGCISESSVAVGIQH  ++TSKPH ISSPTS  EKDEDGK+EVGGE
Sbjct: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHNNASTSKPHPISSPTS-SEKDEDGKEEVGGE 60

Query: 61  NLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDV 120
            LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYK+EMEEMEMDMEIG+PTDV
Sbjct: 61  TLLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKDEMEEMEMDMEIGSPTDV 120

Query: 121 KHVTHIGCDATTRDDANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI 172
           KHVTHIGCDATTRDDANSFIAWETLLASSSWRQFD+QLSNPKHLPNILGHSI
Sbjct: 121 KHVTHIGCDATTRDDANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 171

[Close]

BLAST of Lsi06G007050 vs. NCBI nr
Match: XP_008443702.1 (PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443703.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443705.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443706.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443707.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008443708.1 PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo])

HSP 1 Score: 313.9 bits (803), Expect = 8.4e-82
Identity = 158/173 (91.33%), Postives = 164/173 (94.80%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MRRKMERLVLLPFSVGCISE+SVAVGIQH STTSKPH ISSPTSKGEKDEDGK+E+G E 
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTSKGEKDEDGKEEIGCER 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVK 120
            LEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEM+MEIG+PTDVK
Sbjct: 61  SLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTR--DDANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI 172
           HVTHIGCDAT R  D ANSFIAWETLLASSSWRQFD+QLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATARSEDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 173

[Close]

BLAST of Lsi06G007050 vs. NCBI nr
Match: XP_004139106.1 (CRIB domain-containing protein RIC4 isoform X4 [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 4.2e-81
Identity = 158/172 (91.86%), Postives = 166/172 (96.51%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MRRKMERLVLLPFSVGCISE+SVAVGIQH STTSKPH ISSPTS  EKDEDGK+E+G E+
Sbjct: 1   MRRKMERLVLLPFSVGCISETSVAVGIQHNSTTSKPHPISSPTS-SEKDEDGKEEIGCES 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVK 120
           LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEM+MEIG+PTDVK
Sbjct: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYKEEMEEMEMEMEIGSPTDVK 120

Query: 121 HVTHIGCDATTRDD-ANSFIAWETLLASSSWRQFDEQLSNPKHLPNILGHSI 172
           HVTHIGCDATTR+D ANSFIAWETLLASSSWRQFD+QLSNPKHLPNILGHSI
Sbjct: 121 HVTHIGCDATTREDAANSFIAWETLLASSSWRQFDDQLSNPKHLPNILGHSI 171

[Close]

BLAST of Lsi06G007050 vs. TAIR 10
Match: AT5G16490.1 (ROP-interactive CRIB motif-containing protein 4 )

HSP 1 Score: 105.1 bits (261), Expect = 5.5e-23
Identity = 68/147 (46.26%), Postives = 89/147 (60.54%), Query Frame = 0


Query: 1   MRRKMERLVLLPFSVGCISESSVAVGIQHKSTTSKPHSISSPTSKGEKDEDGKDEVGGEN 60
           MR +MERLV+LPFS+GCIS SSVAV     S  SKPH   S     E++E          
Sbjct: 1   MRDRMERLVVLPFSIGCISVSSVAV----LSPLSKPHHHHSRQVIREQEE---------- 60

Query: 61  LLEESLKNSQRFTALAKPNIGVGFHRLYKGFKNISQLFVYK-EEMEEMEMD-MEIGTPTD 120
             E+++KN  +F A++KP I +G +R++K FK ISQLF  K EE EE+E   MEIG PT+
Sbjct: 61  --EDNMKNVFKFLAVSKPEISIGINRIFKSFKTISQLFADKDEEKEEVETSGMEIGVPTN 120

Query: 121 VKHVTHIGCDATTRDDANSFIAWETLL 146
           VKHV+HIG ++           WE L+
Sbjct: 121 VKHVSHIGWESGLTAATGPGKGWEDLI 131

[Close]

BLAST of Lsi06G007050 vs. TAIR 10
Match: AT1G27380.2 (ROP-interactive CRIB motif-containing protein 2 )

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 79  NIGVGFHRLYKGFKNISQLFV-YKEEMEEMEMDMEIGTPTDVKHVTHIGCDA--TTRDDA 138
           NI  G +R+ + FK+ S  F+ Y+EE +E E +MEIG PTDVKH++HIG D   TT D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of Lsi06G007050 vs. TAIR 10
Match: AT1G27380.1 (ROP-interactive CRIB motif-containing protein 2 )

HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09
Identity = 31/62 (50.00%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 79  NIGVGFHRLYKGFKNISQLFV-YKEEMEEMEMDMEIGTPTDVKHVTHIGCDA--TTRDDA 138
           NI  G +R+ + FK+ S  F+ Y+EE +E E +MEIG PTDVKH++HIG D   TT D+ 
Sbjct: 36  NISDGIYRIIRSFKSFSHFFIRYEEETKEREAEMEIGFPTDVKHLSHIGVDGTMTTFDNT 95

[Close]

BLAST of Lsi06G007050 vs. TAIR 10
Match: AT4G04900.1 (ROP-interactive CRIB motif-containing protein 10 )

HSP 1 Score: 49.7 bits (117), Expect = 2.8e-06
Identity = 24/45 (53.33%), Postives = 33/45 (73.33%), Query Frame = 0


Query: 87  LYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVKHVTHIGCDATT 132
           +YKGFK ISQ+F  ++E +E    +EIG PTDVKHV HIG + ++
Sbjct: 8   IYKGFKCISQIFAVEKERDE----IEIGFPTDVKHVAHIGWEGSS 48

[Close]

BLAST of Lsi06G007050 vs. TAIR 10
Match: AT4G28556.1 (PAK-box/P21-Rho-binding family protein )

HSP 1 Score: 47.0 bits (110), Expect = 1.8e-05
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0


Query: 87  LYKGFKNISQLFVYKEEMEEMEMDMEIGTPTDVKHVTHIGCD 129
           L KG + ISQ+F  + E EE   +M+IG PTDVKHV HIG D
Sbjct: 13  LLKGLRYISQVFAIEGEKEE---EMQIGNPTDVKHVAHIGWD 51

The following BLAST results are available for this feature:

BLAST of Lsi06G007050 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FFD5	7.8e-22	46.26	CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1...	[more]
Q8GYU0	2.2e-08	50.00	CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1...	[more]
Q9M0Y9	3.9e-05	53.33	CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE...	[more]
Q1G3K8	2.5e-04	57.14	CRIB domain-containing protein RIC7 OS=Arabidopsis thaliana OX=3702 GN=RIC7 PE=1...	[more]
F4IVV0	4.3e-04	53.33	CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1...	[more]

BLAST of Lsi06G007050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3B8Q2	4.1e-82	91.33	CRIB domain-containing protein RIC4 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0LY31	2.0e-81	91.86	CRIB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G658520 PE=4 S...	[more]
A0A1S3B9E6	1.9e-79	90.17	CRIB domain-containing protein RIC4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A6J1DY77	8.8e-53	71.82	CRIB domain-containing protein RIC4-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A6J1F000	9.1e-50	66.67	CRIB domain-containing protein RIC4 OS=Cucurbita moschata OX=3662 GN=LOC11144109...	[more]

BLAST of Lsi06G007050 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880090.1	6.2e-85	94.19	CRIB domain-containing protein RIC4-like isoform X1 [Benincasa hispida]	[more]
XP_011660226.1	9.0e-84	93.02	CRIB domain-containing protein RIC4 isoform X3 [Cucumis sativus]	[more]
XP_038880092.1	2.9e-82	93.02	CRIB domain-containing protein RIC4-like isoform X2 [Benincasa hispida]	[more]
XP_008443702.1	8.4e-82	91.33	PREDICTED: CRIB domain-containing protein RIC4 isoform X1 [Cucumis melo] >XP_008...	[more]
XP_004139106.1	4.2e-81	91.86	CRIB domain-containing protein RIC4 isoform X4 [Cucumis sativus]	[more]

BLAST of Lsi06G007050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G16490.1	5.5e-23	46.26	ROP-interactive CRIB motif-containing protein 4	[more]
AT1G27380.2	1.6e-09	50.00	ROP-interactive CRIB motif-containing protein 2	[more]
AT1G27380.1	1.6e-09	50.00	ROP-interactive CRIB motif-containing protein 2	[more]
AT4G04900.1	2.8e-06	53.33	ROP-interactive CRIB motif-containing protein 10	[more]
AT4G28556.1	1.8e-05	57.14	PAK-box/P21-Rho-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000095	CRIB domain	PFAM	PF00786	PBD	coord: 112..151 e-value: 7.2E-8 score: 32.7
IPR000095	CRIB domain	PROSITE	PS50108	CRIB	coord: 113..126 score: 8.996257
IPR036936	CRIB domain superfamily	GENE3D	3.90.810.10	CRIB domain	coord: 109..169 e-value: 3.6E-6 score: 29.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..56
None	No IPR available	PANTHER	PTHR46931:SF6	CRIB DOMAIN-CONTAINING PROTEIN RIC4	coord: 1..165
None	No IPR available	CDD	cd00132	CRIB	coord: 113..149 e-value: 9.42145E-5 score: 36.2625
IPR044509	CRIB domain-containing protein RIC2/4	PANTHER	PTHR46931	CRIB DOMAIN-CONTAINING PROTEIN RIC2	coord: 1..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G007050.1	Lsi06G007050.1	mRNA