Lsi06G005800 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTCGGCCGCGACACCAACGTCAGCTCTCTCAAGTTCTTCCGCCGGACCTGATCTCCGGCGAAGATCCGGCTCAGATCTTGGACTTCGGCAGGGGAGCCGCCGGAGCAGTTTCCGGCCAACCCCATCAGGCATCTGAAGCTTCTGCAAATGCGGCTGCCACCGCCGCCACCGCCGTCGCCGTACTTCAGCGGTCCAAGAATCCCGCCGGTCAGGAAGGCTCCGGCGCCAGCCACTTCCCTCAGCTCCCGAAAACGCCGCCGTCTACTTGA ATGCCTCGGCCGCGACACCAACGTCAGCTCTCTCAAGTTCTTCCGCCGGACCTGATCTCCGGCGAAGATCCGGCTCAGATCTTGGACTTCGGCAGGGGAGCCGCCGGAGCAGTTTCCGGCCAACCCCATCAGGCATCTGAAGCTTCTGCAAATGCGGCTGCCACCGCCGCCACCGCCGTCGCCGTACTTCAGCGGTCCAAGAATCCCGCCGGTCAGGAAGGCTCCGGCGCCAGCCACTTCCCTCAGCTCCCGAAAACGCCGCCGTCTACTTGA ATGCCTCGGCCGCGACACCAACGTCAGCTCTCTCAAGTTCTTCCGCCGGACCTGATCTCCGGCGAAGATCCGGCTCAGATCTTGGACTTCGGCAGGGGAGCCGCCGGAGCAGTTTCCGGCCAACCCCATCAGGCATCTGAAGCTTCTGCAAATGCGGCTGCCACCGCCGCCACCGCCGTCGCCGTACTTCAGCGGTCCAAGAATCCCGCCGGTCAGGAAGGCTCCGGCGCCAGCCACTTCCCTCAGCTCCCGAAAACGCCGCCGTCTACTTGA MPRPRHQRQLSQVLPPDLISGEDPAQILDFGRGAAGAVSGQPHQASEASANAAATAATAVAVLQRSKNPAGQEGSGASHFPQLPKTPPST Homology
BLAST of Lsi06G005800 vs. ExPASy TrEMBL
Match: A0A0A0M0A1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629040 PE=4 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.8e-28 Identity = 74/90 (82.22%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Lsi06G005800 vs. NCBI nr
Match: KGN66547.1 (hypothetical protein Csa_007065 [Cucumis sativus]) HSP 1 Score: 134.8 bits (338), Expect = 3.7e-28 Identity = 74/90 (82.22%), Postives = 77/90 (85.56%), Query Frame = 0
BLAST of Lsi06G005800 vs. NCBI nr
Match: KAG6590166.1 (hypothetical protein SDJN03_15589, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 118.2 bits (295), Expect = 3.6e-23 Identity = 66/92 (71.74%), Postives = 73/92 (79.35%), Query Frame = 0
BLAST of Lsi06G005800 vs. NCBI nr
Match: KAG6588222.1 (hypothetical protein SDJN03_16787, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.0 bits (271), Expect = 2.2e-20 Identity = 64/91 (70.33%), Postives = 70/91 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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