Lsi06G005560 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G005560
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box protein
Location	chr06: 7093586 .. 7094746 (+)
RNA-Seq Expression	Lsi06G005560
Synteny	Lsi06G005560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCATGGATCCAACCAAAAATCAAATTCAAATTCCAATTCAAGATCAAGATCAACAACAACAACAAGAAGAAGAACAACAAGAACATGTAGACCAAGACTTTTTTGATCTTCTACCTGATGCAATTCTTCATCTCATCTTCACCAAAATAATCGACGCTCCCTCTCTAATTCGATGCCTCGCCGTCTCCAAACGATTCGCCTCTCTCATTTCGCAATCCGACGCCGTTTTCCTCGCCATTCCTCGCCTCCTCCTCGATTCCAAGTCGAAATCCAGAATCACTTCTCGCTCGCTGTCCAATTCCACGATTAGGTTTTTCTTTCGTAAGTTTCTGTTTACGCCTTTTCGTTTAATTCGGCGTCTGATTACTCGTACTTCGCAATCCAGTTCCGGATTTGGCGATTGGTATTACTGGCCAAGTGTTGCGTTGAAGGAATTGAAAGGAATTAAGTTCGTTCATATGGAACTCCCTTGCTGCGGCGATGAAATCGGTTCTAACCACAGCGGCGGTGCGTTACTCAAATGGAAAGCTGAGTTCGGGGCGGAATTGAAGAGTTGTGTTGTTCTTGGAGCGTCGTCTTTACGAAGGAAATCGATTGTTGAATCTGAATTAGAGGTTAAAGAAACAGAGGAAAATCGATTAGAAGTAGACTCGGAATCGGAAATGGGAGATGATGAGCTTAAGTTACGAATTGTATGGACGATTTCATCGCTAATTGCGGCTTCCATGAGACATTACTTAGTGAAACAGATGGTGAATGATTTTCCGTTGCTACAAACAGTTTTGATTACGGATTCAACAAAACAAGGAAGGCTGTGTATGGAAGAGAAACAAGTGATGGAACTCAGAGAATCAATGAAATCATCTTCCAGTTCTTCGATTGGAGCTTCGGTAGAGAGAACTGTAATTCCAGATCTGAAGATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGGCCGGATTCGTAATGACGGCGGCGACACTGATGGTGATTAGGCCCAGTGGTGCAGGTGGTATGGGTTTGGATGGATTAGAATCAATAGGAGATGATTTTGATGGTGAAGAAGGGGAGAAACTTGGAGTTTATGGAGAAGCTGTGAGGAAATTGATGAAGTTGAAGAGAAATTATGCTTTGGAGGTAAATTCTTTCTGA

mRNA sequence

ATGCTCATGGATCCAACCAAAAATCAAATTCAAATTCCAATTCAAGATCAAGATCAACAACAACAACAAGAAGAAGAACAACAAGAACATGTAGACCAAGACTTTTTTGATCTTCTACCTGATGCAATTCTTCATCTCATCTTCACCAAAATAATCGACGCTCCCTCTCTAATTCGATGCCTCGCCGTCTCCAAACGATTCGCCTCTCTCATTTCGCAATCCGACGCCGTTTTCCTCGCCATTCCTCGCCTCCTCCTCGATTCCAAGTCGAAATCCAGAATCACTTCTCGCTCGCTGTCCAATTCCACGATTAGGTTTTTCTTTCGTAAGTTTCTGTTTACGCCTTTTCGTTTAATTCGGCGTCTGATTACTCGTACTTCGCAATCCAGTTCCGGATTTGGCGATTGGTATTACTGGCCAAGTGTTGCGTTGAAGGAATTGAAAGGAATTAAGTTCGTTCATATGGAACTCCCTTGCTGCGGCGATGAAATCGGTTCTAACCACAGCGGCGGTGCGTTACTCAAATGGAAAGCTGAGTTCGGGGCGGAATTGAAGAGTTGTGTTGTTCTTGGAGCGTCGTCTTTACGAAGGAAATCGATTGTTGAATCTGAATTAGAGGTTAAAGAAACAGAGGAAAATCGATTAGAAGTAGACTCGGAATCGGAAATGGGAGATGATGAGCTTAAGTTACGAATTGTATGGACGATTTCATCGCTAATTGCGGCTTCCATGAGACATTACTTAGTGAAACAGATGGTGAATGATTTTCCGTTGCTACAAACAGTTTTGATTACGGATTCAACAAAACAAGGAAGGCTGTGTATGGAAGAGAAACAAGTGATGGAACTCAGAGAATCAATGAAATCATCTTCCAGTTCTTCGATTGGAGCTTCGGTAGAGAGAACTGTAATTCCAGATCTGAAGATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGGCCGGATTCGTAATGACGGCGGCGACACTGATGGTGATTAGGCCCAGTGGTGCAGGTGGTATGGGTTTGGATGGATTAGAATCAATAGGAGATGATTTTGATGGTGAAGAAGGGGAGAAACTTGGAGTTTATGGAGAAGCTGTGAGGAAATTGATGAAGTTGAAGAGAAATTATGCTTTGGAGGTAAATTCTTTCTGA

Coding sequence (CDS)

ATGCTCATGGATCCAACCAAAAATCAAATTCAAATTCCAATTCAAGATCAAGATCAACAACAACAACAAGAAGAAGAACAACAAGAACATGTAGACCAAGACTTTTTTGATCTTCTACCTGATGCAATTCTTCATCTCATCTTCACCAAAATAATCGACGCTCCCTCTCTAATTCGATGCCTCGCCGTCTCCAAACGATTCGCCTCTCTCATTTCGCAATCCGACGCCGTTTTCCTCGCCATTCCTCGCCTCCTCCTCGATTCCAAGTCGAAATCCAGAATCACTTCTCGCTCGCTGTCCAATTCCACGATTAGGTTTTTCTTTCGTAAGTTTCTGTTTACGCCTTTTCGTTTAATTCGGCGTCTGATTACTCGTACTTCGCAATCCAGTTCCGGATTTGGCGATTGGTATTACTGGCCAAGTGTTGCGTTGAAGGAATTGAAAGGAATTAAGTTCGTTCATATGGAACTCCCTTGCTGCGGCGATGAAATCGGTTCTAACCACAGCGGCGGTGCGTTACTCAAATGGAAAGCTGAGTTCGGGGCGGAATTGAAGAGTTGTGTTGTTCTTGGAGCGTCGTCTTTACGAAGGAAATCGATTGTTGAATCTGAATTAGAGGTTAAAGAAACAGAGGAAAATCGATTAGAAGTAGACTCGGAATCGGAAATGGGAGATGATGAGCTTAAGTTACGAATTGTATGGACGATTTCATCGCTAATTGCGGCTTCCATGAGACATTACTTAGTGAAACAGATGGTGAATGATTTTCCGTTGCTACAAACAGTTTTGATTACGGATTCAACAAAACAAGGAAGGCTGTGTATGGAAGAGAAACAAGTGATGGAACTCAGAGAATCAATGAAATCATCTTCCAGTTCTTCGATTGGAGCTTCGGTAGAGAGAACTGTAATTCCAGATCTGAAGATGAAGATGTGGCATGTGCCGGTGCTGGATCTGCCGGCGGCCGGATTCGTAATGACGGCGGCGACACTGATGGTGATTAGGCCCAGTGGTGCAGGTGGTATGGGTTTGGATGGATTAGAATCAATAGGAGATGATTTTGATGGTGAAGAAGGGGAGAAACTTGGAGTTTATGGAGAAGCTGTGAGGAAATTGATGAAGTTGAAGAGAAATTATGCTTTGGAGGTAAATTCTTTCTGA

Protein sequence

MLMDPTKNQIQIPIQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDSESEMGDDELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEEGEKLGVYGEAVRKLMKLKRNYALEVNSF

Homology

[Close]

BLAST of Lsi06G005560 vs. ExPASy Swiss-Prot
Match: O49508 (F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.3e-45
Identity = 145/379 (38.26%), Postives = 205/379 (54.09%), Query Frame = 0


Query: 34  DFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSR 93
           D FD LPD+IL LIF  I D  +L RC  VSKRF SLI Q + VF+ +  ++ D  S S 
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 94  ITSRSLSNSTIRFFFRKF--LFTPFRLIRRLITRTSQSS------------SGFGD---- 153
           ++ +  S S    F   F  +F P + + + + R+  SS            SG  D    
Sbjct: 83  LSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIE 142

Query: 154 ----WYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAEFGAELKSCVVLG 213
                ++ P+  LK    IKF+ +ELP    E+G +   G LLKW+AEFG+ L++CV+LG
Sbjct: 143 QGGVTHHSPTQVLKNFDEIKFLKIELP--SGELGID--DGVLLKWRAEFGSTLENCVILG 202

Query: 214 ASSL----RRKSIVESELEVKETEENRLEVDSESEMGDDELKLRIVWTISSLIAASMRHY 273
           ASS+           S   V   E+N    +S    G   LKLR+VWTISSLIAAS RHY
Sbjct: 203 ASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGG--LKLRVVWTISSLIAASARHY 262

Query: 274 LVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDL 333
           L++ ++ +   L ++++TD   QG LCM   Q+ ELR    S+SS+S     +RT++P L
Sbjct: 263 LLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSAS-----KRTLVPAL 322

Query: 334 KMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEEGEKLGVYGE 387
            M++W+ P L+LP  G V+  ATL+ IRPS +     D +  +   FD         YG 
Sbjct: 323 NMRLWYAPSLELP-DGTVLKGATLVAIRPSESKKEVCD-VSWVSSAFDEP-------YGV 380

[Close]

BLAST of Lsi06G005560 vs. ExPASy Swiss-Prot
Match: Q9C534 (F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 9.6e-44
Identity = 138/391 (35.29%), Postives = 210/391 (53.71%), Query Frame = 0


Query: 26  EQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLL 85
           E Q     D FDLLPD++L LIF K+ D   L RC  VS+RF SL+   + V + +  ++
Sbjct: 16  EPQSLTSFDHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVI 75

Query: 86  LDSKSKSRITSRSLSNST----------------IRFFFRKFLFTPFRLIRRLITRTSQS 145
            D  S S   +   S +T                 R  F   +F PF+++ +++     S
Sbjct: 76  SDDDSSSSDENHRFSLNTASISDAGGAGGSFSALFRLVFAP-IFKPFQMLGQILGPKRSS 135

Query: 146 SS----------GFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAE 205
           SS            G  ++ P+  LK    I+F+ +ELP    E+G     G LLKW+A+
Sbjct: 136 SSFDASFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELPT--GELGI--EDGILLKWRAD 195

Query: 206 FGAELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDS----ESEMGDDELKLRIVWT 265
           FG+ L +C++LGASS+ + + V++        EN ++ D+    ES   +  LKLR+VWT
Sbjct: 196 FGSTLDNCMILGASSVIQSNSVKN-------HENSVDEDNGNIPESFYTNGGLKLRVVWT 255

Query: 266 ISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSI 325
           ISSLIAAS RHYL++ ++N+   L  ++++D+  QG LCM  +Q+ ELR +  S+SS+S 
Sbjct: 256 ISSLIAASARHYLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSAS- 315

Query: 326 GASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFD 385
               +RT++P L M++W+ P LDLP  G V+  ATL+ IRPS +     D    + D F+
Sbjct: 316 ----KRTLVPALNMRLWYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDA-SWLSDAFE 375

Query: 386 GEEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
              G         V K++  +R Y LE+NSF
Sbjct: 376 EPFG--------TVAKMLIKRRTYCLEMNSF 379

[Close]

BLAST of Lsi06G005560 vs. ExPASy Swiss-Prot
Match: Q9FNK5 (F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 9.9e-41
Identity = 140/414 (33.82%), Postives = 213/414 (51.45%), Query Frame = 0


Query: 14  IQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQ 73
           I   D   +   E  + ++ D FD LPD+IL L+F KI D  +L RC  VS+RF SL+ Q
Sbjct: 5   IPRSDPPSRIHPEPPQTLEIDHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQ 64

Query: 74  SDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKF------LFTPFRLIRRLI-TRT 133
            D V + +  ++ D  S S  + +S S S+   F   F      +  P + + + + T+ 
Sbjct: 65  VDNVVVRVDCVISDDDSSSLSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKR 124

Query: 134 SQSSSG----------------------FGDWYYWPSVALKELKGIKFVHMELPCCGDEI 193
           S SS G                       G  ++ P+  LK    I+++ +ELP    E+
Sbjct: 125 SSSSCGGSGSSSSSLSISGDDDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELP--SGEL 184

Query: 194 GSNHSGGALLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDSESEMG 253
           G +   G LLKW+AEFG+ L +CV+LGASS+    I  + + V +  +    V++     
Sbjct: 185 GID--DGVLLKWRAEFGSTLDNCVILGASSV----IPPNPMRVSQACDTTTVVEAPGSGS 244

Query: 254 DDE------------LKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGR 313
           DD             LKLR+VWTISSLIAAS RHYL++ ++ +   L ++++TDS  QG 
Sbjct: 245 DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGV 304

Query: 314 LCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLM 373
           LCM   Q+ ELR    ++SS+S     +RT++P L M++W+ P L+LP  G V+  ATL+
Sbjct: 305 LCMNRDQLEELRVKPLAASSAS-----KRTLVPALNMRLWYAPTLELP-DGTVLKGATLV 364

Query: 374 VIRPSGAGGMGLDGLESIGDDFDGEEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
            IRPS      +  +  +   F+         Y  A + L+K +R Y LE+NSF
Sbjct: 365 AIRPS-ESKKEVSDISWVSSAFEEP-------YETAAKMLVK-RRTYCLEMNSF 395

[Close]

BLAST of Lsi06G005560 vs. ExPASy Swiss-Prot
Match: Q9C9S2 (F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 9.3e-39
Identity = 122/353 (34.56%), Postives = 193/353 (54.67%), Query Frame = 0


Query: 34  DFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSR 93
           D FD +PD ++  I  ++ D  +LIRC +VSKRF SL +QS+++ L + ++L  ++S S 
Sbjct: 2   DAFDAIPDPVVIDILNRVGDVKTLIRCRSVSKRFNSLATQSESLLLQLDQILGATESDSE 61

Query: 94  ITSRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSQSSSGFGDWYYWPSVALKELKGIKFV 153
           I      +S I  FFR    +   L+  + ++ + S          P+  L   + I+ +
Sbjct: 62  I------DSPIASFFRSLFKSIHGLLPPIFSKPANSDEILTRSPKTPAQILSGFERIRNL 121

Query: 154 HMELPCCGDEIGSNHSGGALLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEEN 213
            +EL   G ++      GA +KWKAEFG  LKSCV++   S    +   +  E     + 
Sbjct: 122 EVEL--YGGDV--KLEKGAAVKWKAEFGKTLKSCVIVAFRSATVNT--SAATEAAAVVDG 181

Query: 214 RLEVDSESEMGDDELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRL 273
            +E DSE   G   LK R+VWTIS+L+AAS RHYL++ +V D   ++ +++ DS  +G +
Sbjct: 182 VVESDSEFVCG---LKTRVVWTISALMAASTRHYLMRDLVKDHKEMEKLIVRDSDGEGTV 241

Query: 274 CMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMV 333
            M+   + E RE+     +       ERTV+P ++M M H P L L  +G  + AATL+V
Sbjct: 242 VMDAAGMKEYRETEVRGDNKESERVGERTVVPSVRMSMRHAPSLML-KSGICLEAATLVV 301

Query: 334 IRPSGAGGMGLDGLESIGDDFDGEEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
           +RP+G      D +E + + F G+  + +  YGEAV  L+K +RN  LE+NSF
Sbjct: 302 VRPTGVASDDND-VELVTEAFAGDGDDCM--YGEAVTALLKRRRN-VLEMNSF 334

[Close]

BLAST of Lsi06G005560 vs. ExPASy Swiss-Prot
Match: Q9LM18 (F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-36
Identity = 124/353 (35.13%), Postives = 190/353 (53.82%), Query Frame = 0


Query: 34  DFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSR 93
           D FD LPD I+  I  K+ D  +L+RC ++SKRF SL+ QS+++ L +   + DS   + 
Sbjct: 2   DVFDGLPDPIIVDILNKVGDVKTLLRCSSLSKRFNSLVPQSESLTLRLDHSVSDSPVVTS 61

Query: 94  ITSRSLSNSTIRFFFRKFLFTPFRLIRRLITRTSQSSSGFGDWYYWPSVALKELKGIKFV 153
           I  RSL N  +    +           + IT T+ S S        P   L     I+ +
Sbjct: 62  I-FRSLFNGLVSLLSKP---------AKPITITTLSPS-------LPFKILSRFDRIRNL 121

Query: 154 HMELPCCGDEIGSNHSGGALLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEEN 213
            +ELP  G ++      GA +KWKAEFG  LKSCV++   + R    V S + V+     
Sbjct: 122 DVELP--GGDV--KLEKGAAVKWKAEFGKTLKSCVIV---AFRSAGTVSSPVAVEG---- 181

Query: 214 RLEVDSESEMGDDELKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRL 273
             E D+E   G   LK R+VWTIS+L+AAS RHYL++++V +   ++++++ D  ++G +
Sbjct: 182 --ESDAEFVTG---LKTRVVWTISALMAASSRHYLMREVVKEHEEIESLVMRDKEREGTV 241

Query: 274 CMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMV 333
            M E+ + ELR +             +R+V+P ++M M H P L L  +G  + +ATL++
Sbjct: 242 VMNEEGLKELRNTEARVEDEERVVKNKRSVVPSVRMSMRHAPSLKL-KSGICLESATLVI 301

Query: 334 IRPSGAGGMGLDGLESIGDDFDGEEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
           +RPSGA     D  E   + F G+      +YGEAV  L+K K+N ALE+NSF
Sbjct: 302 VRPSGADFEVGDDAELATEAFVGD-----CMYGEAVVALLKCKKN-ALEMNSF 314

[Close]

BLAST of Lsi06G005560 vs. ExPASy TrEMBL
Match: A0A6J1KS00 (F-box protein At4g18380-like OS=Cucurbita maxima OX=3661 GN=LOC111497724 PE=4 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.4e-154
Identity = 300/390 (76.92%), Postives = 334/390 (85.64%), Query Frame = 0


Query: 3   MDPTKNQIQIPIQDQDQQQ-----QQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSL 62
           MDP KNQ +I  + Q+QQQ     ++E++ ++  D D+FDLLPDAILHLIF K+IDA SL
Sbjct: 1   MDPIKNQFEIRNRGQEQQQLVVEEEEEDDDEDDDDLDYFDLLPDAILHLIFNKLIDARSL 60

Query: 63  IRCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFR 122
           IRCLAVSKRFASLISQSD VFLAIPR +LDSK KSR+  RS  NS IRFF RKF+FTPFR
Sbjct: 61  IRCLAVSKRFASLISQSDTVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFR 120

Query: 123 LIRRLITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWK 182
            IRR+ITRTS  SSGFGDWYYWPSVALKE +GIKFVHMELPCCGDEIGS H GG LLKWK
Sbjct: 121 FIRRVITRTSPPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWK 180

Query: 183 AEFGAELKSCVVLGASSLRRKSIVESELEVKETEENR-LEVDSESEMGDDELKLRIVWTI 242
           AEFGAELKSCVVLGASSLRRKSIV S+ E KETEE R +E DSE+E+GD+ELKLRIVWTI
Sbjct: 181 AEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTI 240

Query: 243 SSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIG 302
           SSLIAASMRHYLVKQMV DFP+LQ+V+ITDSTKQGRL MEEKQ+ ELR+SMKSS+S+   
Sbjct: 241 SSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLYMEEKQLKELRDSMKSSTSNQ-- 300

Query: 303 ASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDG 362
           + VERTVIPDL MKMWHVPVLDLPA+G VMTAATL+VIRPS A GM LDGL+ +GD+FD 
Sbjct: 301 SPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSA-GMALDGLDKMGDEFDA 360

Query: 363 EEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
           EE EKLG YGEA RKLMKLKRNY LEVNSF
Sbjct: 361 EETEKLGAYGEAARKLMKLKRNYTLEVNSF 387

[Close]

BLAST of Lsi06G005560 vs. ExPASy TrEMBL
Match: A0A6J1ES21 (F-box protein At4g18380-like OS=Cucurbita moschata OX=3662 GN=LOC111435352 PE=4 SV=1)

HSP 1 Score: 551.6 bits (1420), Expect = 2.6e-153
Identity = 298/388 (76.80%), Postives = 332/388 (85.57%), Query Frame = 0


Query: 3   MDPTKNQIQIPIQDQDQQQ---QQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIR 62
           MDP K+Q +I  + Q+QQQ    +EEE+ +  D D+FDLLPDAILHLIF K+IDA SLIR
Sbjct: 1   MDPIKDQFEIRNRGQEQQQLVVDEEEEEDDDDDLDYFDLLPDAILHLIFNKLIDARSLIR 60

Query: 63  CLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRLI 122
           CLAVSKRFASLI QS+ VFLAIPR +LDSK KSR+  RS  NS IRFF RKF+FTPFR I
Sbjct: 61  CLAVSKRFASLILQSETVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFI 120

Query: 123 RRLITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAE 182
           RR+ITRTS  SSGFGDWYYWPSVALKE +GIKFVHMELPCCGDEIGS H GG LLKWKAE
Sbjct: 121 RRVITRTSTPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAE 180

Query: 183 FGAELKSCVVLGASSLRRKSIVESELEVKETEENR-LEVDSESEMGDDELKLRIVWTISS 242
           FGAELKSCVVLGASSLRRKSIV S+ E KETEE R +E DSE+E+GD+ELKLRIVWTISS
Sbjct: 181 FGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISS 240

Query: 243 LIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGAS 302
           LIAASMRHYLVKQMV DFP+LQ+V+ITDSTKQGRLCMEEKQ+ ELR+SMKSS+S+   + 
Sbjct: 241 LIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQ--SP 300

Query: 303 VERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEE 362
           VERTVIPDL MKMWHVPVLDLPA+G VMTAATL+VIRPS A G+ LDGL+ +GD+FD EE
Sbjct: 301 VERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSA-GIALDGLDKMGDEFDAEE 360

Query: 363 GEKLGVYGEAVRKLMKLKRNYALEVNSF 387
            EK G YGEA RKLMKLKRNY LEVNSF
Sbjct: 361 TEKHGAYGEAARKLMKLKRNYTLEVNSF 385

[Close]

BLAST of Lsi06G005560 vs. ExPASy TrEMBL
Match: A0A5D3DW74 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00880 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.7e-152
Identity = 305/388 (78.61%), Postives = 330/388 (85.05%), Query Frame = 0


Query: 3   MDPTKNQIQ--IPIQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRC 62
           MDPT NQ+Q  IPI  Q+QQ            QDFFDLLPD+ILHLIFTK+  APSLIRC
Sbjct: 1   MDPTNNQLQLHIPIPIQNQQ------------QDFFDLLPDSILHLIFTKLTHAPSLIRC 60

Query: 63  LAVSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRLIR 122
           L VSKRFASLISQSD+VFL+IP LLL    KSR T  SL     RFFFRKFLF PFR IR
Sbjct: 61  LTVSKRFASLISQSDSVFLSIPPLLLTPNPKSRTTPPSL-----RFFFRKFLFNPFRFIR 120

Query: 123 RLITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAEF 182
           RLIT TSQS+S F DWYYWPSVALKELKG+K +H+ELPCCGDEIGSNH+GGALLKWKAEF
Sbjct: 121 RLITHTSQSTSRFSDWYYWPSVALKELKGLKSLHIELPCCGDEIGSNHNGGALLKWKAEF 180

Query: 183 GAELKSCVVLGASSLRRKSIVESE-LEVK-ETEENRLEVDSESEMGDDELKLRIVWTISS 242
           G++LK+CVVLGASSLRRKS+VESE  EVK ETEENRL  +SESEMGD ELK RIVWTISS
Sbjct: 181 GSQLKTCVVLGASSLRRKSVVESESSEVKAETEENRLHSESESEMGDGELKSRIVWTISS 240

Query: 243 LIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGAS 302
           LIAASMRHYLVKQMVNDFPLL+TVLITDS KQGRLCMEE++VMELRESMK SSSS     
Sbjct: 241 LIAASMRHYLVKQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMKLSSSS----C 300

Query: 303 VERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEE 362
           VER+VIPDLKMKMW+VPVLDL AAGFVMTAATL+VI+PSG GGMGLDGLE IGD+FD E+
Sbjct: 301 VERSVIPDLKMKMWYVPVLDLAAAGFVMTAATLVVIKPSG-GGMGLDGLERIGDEFDSED 360

Query: 363 GEKLGVYGEAVRKLMKLKRNYALEVNSF 387
           GEK GVYGEAVRKLMKLKRNYALEVNSF
Sbjct: 361 GEKFGVYGEAVRKLMKLKRNYALEVNSF 366

[Close]

BLAST of Lsi06G005560 vs. ExPASy TrEMBL
Match: A0A5A7UJD0 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G002200 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.9e-152
Identity = 305/390 (78.21%), Postives = 330/390 (84.62%), Query Frame = 0


Query: 3   MDPTKNQIQ----IPIQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLI 62
           MDPT NQ+Q    IPI  Q+QQ            QDFFDLLPD+ILHLIFTK+  APSLI
Sbjct: 1   MDPTNNQLQLHIPIPIPIQNQQ------------QDFFDLLPDSILHLIFTKLTHAPSLI 60

Query: 63  RCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRL 122
           RCL VSKRFASLISQSD+VFL+IP LLL    KSR T  SL     RFFFRKFLF PFR 
Sbjct: 61  RCLTVSKRFASLISQSDSVFLSIPPLLLTPNPKSRTTPPSL-----RFFFRKFLFNPFRF 120

Query: 123 IRRLITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKA 182
           IRRLIT TSQS+S F DWYYWPSVALKELKG+K +H+ELPCCGDEIGSNH+GGALLKWKA
Sbjct: 121 IRRLITHTSQSTSRFSDWYYWPSVALKELKGLKSLHIELPCCGDEIGSNHNGGALLKWKA 180

Query: 183 EFGAELKSCVVLGASSLRRKSIVESE-LEVK-ETEENRLEVDSESEMGDDELKLRIVWTI 242
           EFG++LK+CVVLGASSLRRKS+VESE  EVK ETEENRL  +SESEMGD ELK RIVWTI
Sbjct: 181 EFGSQLKTCVVLGASSLRRKSVVESESSEVKAETEENRLHSESESEMGDGELKSRIVWTI 240

Query: 243 SSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIG 302
           SSLIAASMRHYLVKQMVNDFPLL+TVLITDS KQGRLCMEE++VMELRESMK SSSS   
Sbjct: 241 SSLIAASMRHYLVKQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMKLSSSS--- 300

Query: 303 ASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDG 362
             VER+VIPDLKMKMW+VPVLDL AAGFVMTAATL+VI+PSG GGMGLDGLE IGD+FD 
Sbjct: 301 -CVERSVIPDLKMKMWYVPVLDLAAAGFVMTAATLVVIKPSG-GGMGLDGLERIGDEFDS 360

Query: 363 EEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
           E+GEK GVYGEAVRKLMKLKRNYALEVNSF
Sbjct: 361 EDGEKFGVYGEAVRKLMKLKRNYALEVNSF 368

[Close]

BLAST of Lsi06G005560 vs. ExPASy TrEMBL
Match: A0A1S3BP50 (F-box protein At4g18380-like OS=Cucumis melo OX=3656 GN=LOC103491999 PE=4 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.9e-152
Identity = 305/390 (78.21%), Postives = 330/390 (84.62%), Query Frame = 0


Query: 3   MDPTKNQIQ----IPIQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLI 62
           MDPT NQ+Q    IPI  Q+QQ            QDFFDLLPD+ILHLIFTK+  APSLI
Sbjct: 1   MDPTNNQLQLHIPIPIPIQNQQ------------QDFFDLLPDSILHLIFTKLTHAPSLI 60

Query: 63  RCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRL 122
           RCL VSKRFASLISQSD+VFL+IP LLL    KSR T  SL     RFFFRKFLF PFR 
Sbjct: 61  RCLTVSKRFASLISQSDSVFLSIPPLLLTPNPKSRTTPPSL-----RFFFRKFLFNPFRF 120

Query: 123 IRRLITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKA 182
           IRRLIT TSQS+S F DWYYWPSVALKELKG+K +H+ELPCCGDEIGSNH+GGALLKWKA
Sbjct: 121 IRRLITHTSQSTSRFSDWYYWPSVALKELKGLKSLHIELPCCGDEIGSNHNGGALLKWKA 180

Query: 183 EFGAELKSCVVLGASSLRRKSIVESE-LEVK-ETEENRLEVDSESEMGDDELKLRIVWTI 242
           EFG++LK+CVVLGASSLRRKS+VESE  EVK ETEENRL  +SESEMGD ELK RIVWTI
Sbjct: 181 EFGSQLKTCVVLGASSLRRKSVVESESSEVKAETEENRLHSESESEMGDGELKSRIVWTI 240

Query: 243 SSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIG 302
           SSLIAASMRHYLVKQMVNDFPLL+TVLITDS KQGRLCMEE++VMELRESMK SSSS   
Sbjct: 241 SSLIAASMRHYLVKQMVNDFPLLKTVLITDSAKQGRLCMEEEEVMELRESMKLSSSS--- 300

Query: 303 ASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDG 362
             VER+VIPDLKMKMW+VPVLDL AAGFVMTAATL+VI+PSG GGMGLDGLE IGD+FD 
Sbjct: 301 -CVERSVIPDLKMKMWYVPVLDLAAAGFVMTAATLVVIKPSG-GGMGLDGLERIGDEFDS 360

Query: 363 EEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
           E+GEK GVYGEAVRKLMKLKRNYALEVNSF
Sbjct: 361 EDGEKFGVYGEAVRKLMKLKRNYALEVNSF 368

[Close]

BLAST of Lsi06G005560 vs. NCBI nr
Match: XP_038878550.1 (F-box protein At4g18380-like isoform X3 [Benincasa hispida])

HSP 1 Score: 629.8 bits (1623), Expect = 1.6e-176
Identity = 335/385 (87.01%), Postives = 357/385 (92.73%), Query Frame = 0


Query: 3   MDPTKNQIQIPIQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLA 62
           MD T NQI IPIQ+  Q+Q        HVDQD FDLLPDAILHLIFTK+ DAPSLIRCL 
Sbjct: 1   MDQTNNQIPIPIQNHHQEQ--------HVDQDLFDLLPDAILHLIFTKLTDAPSLIRCLT 60

Query: 63  VSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRLIRRL 122
           VSKRFASL SQSD+VFLAIPRLLLDSKSKSRIT  S S+STIRFF R+FLFTPFRLIRRL
Sbjct: 61  VSKRFASLTSQSDSVFLAIPRLLLDSKSKSRITRTSQSSSTIRFFVRRFLFTPFRLIRRL 120

Query: 123 ITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAEFGA 182
           I RTSQSSSGF +WYYWPSVALKELKGIKFVHMELPCCGDEIGSNH+GGALLKWKAEFG+
Sbjct: 121 IARTSQSSSGFSEWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHNGGALLKWKAEFGS 180

Query: 183 ELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDSESEMGDDELKLRIVWTISSLIAA 242
           ELKSCVVLGASSLRRKSIVES+LEVKETEENRL++DSESEMGD+ELKLRI+WTISSLIAA
Sbjct: 181 ELKSCVVLGASSLRRKSIVESDLEVKETEENRLDLDSESEMGDEELKLRIIWTISSLIAA 240

Query: 243 SMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGA-SVER 302
           SMRHYLVKQMVNDFPLL+TVLITDSTKQGRLCMEEK+VMELRESMKSS SSSIGA SV+R
Sbjct: 241 SMRHYLVKQMVNDFPLLKTVLITDSTKQGRLCMEEKEVMELRESMKSSLSSSIGASSVQR 300

Query: 303 TVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEEGEK 362
           TVIPDLKM+MWHVPVLDLPAAGFVMTAATL+VIRPSG GG+GLDGL+SIGD+FD EE EK
Sbjct: 301 TVIPDLKMEMWHVPVLDLPAAGFVMTAATLVVIRPSG-GGIGLDGLDSIGDEFDDEEREK 360

Query: 363 LGVYGEAVRKLMKLKRNYALEVNSF 387
           LGVYGEAVRKLMKLKRNYALEVNSF
Sbjct: 361 LGVYGEAVRKLMKLKRNYALEVNSF 376

[Close]

BLAST of Lsi06G005560 vs. NCBI nr
Match: XP_038878549.1 (F-box protein At4g18380-like isoform X2 [Benincasa hispida])

HSP 1 Score: 621.7 bits (1602), Expect = 4.3e-174
Identity = 331/381 (86.88%), Postives = 353/381 (92.65%), Query Frame = 0


Query: 3   MDPTKNQIQIPIQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLA 62
           MD T NQI IPIQ+  Q+Q        HVDQD FDLLPDAILHLIFTK+ DAPSLIRCL 
Sbjct: 1   MDQTNNQIPIPIQNHHQEQ--------HVDQDLFDLLPDAILHLIFTKLTDAPSLIRCLT 60

Query: 63  VSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRLIRRL 122
           VSKRFASL SQSD+VFLAIPRLLLDSKSKSRIT  S S+STIRFF R+FLFTPFRLIRRL
Sbjct: 61  VSKRFASLTSQSDSVFLAIPRLLLDSKSKSRITRTSQSSSTIRFFVRRFLFTPFRLIRRL 120

Query: 123 ITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAEFGA 182
           I RTSQSSSGF +WYYWPSVALKELKGIKFVHMELPCCGDEIGSNH+GGALLKWKAEFG+
Sbjct: 121 IARTSQSSSGFSEWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHNGGALLKWKAEFGS 180

Query: 183 ELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDSESEMGDDELKLRIVWTISSLIAA 242
           ELKSCVVLGASSLRRKSIVES+LEVKETEENRL++DSESEMGD+ELKLRI+WTISSLIAA
Sbjct: 181 ELKSCVVLGASSLRRKSIVESDLEVKETEENRLDLDSESEMGDEELKLRIIWTISSLIAA 240

Query: 243 SMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGA-SVER 302
           SMRHYLVKQMVNDFPLL+TVLITDSTKQGRLCMEEK+VMELRESMKSS SSSIGA SV+R
Sbjct: 241 SMRHYLVKQMVNDFPLLKTVLITDSTKQGRLCMEEKEVMELRESMKSSLSSSIGASSVQR 300

Query: 303 TVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEEGEK 362
           TVIPDLKM+MWHVPVLDLPAAGFVMTAATL+VIRPSG GG+GLDGL+SIGD+FD EE EK
Sbjct: 301 TVIPDLKMEMWHVPVLDLPAAGFVMTAATLVVIRPSG-GGIGLDGLDSIGDEFDDEEREK 360

Query: 363 LGVYGEAVRKLMKLKRNYALE 383
           LGVYGEAVRKLMKLKRNYALE
Sbjct: 361 LGVYGEAVRKLMKLKRNYALE 372

[Close]

BLAST of Lsi06G005560 vs. NCBI nr
Match: XP_038878548.1 (F-box protein At4g18380-like isoform X1 [Benincasa hispida])

HSP 1 Score: 621.7 bits (1602), Expect = 4.3e-174
Identity = 331/381 (86.88%), Postives = 353/381 (92.65%), Query Frame = 0


Query: 3   MDPTKNQIQIPIQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLA 62
           MD T NQI IPIQ+  Q+Q        HVDQD FDLLPDAILHLIFTK+ DAPSLIRCL 
Sbjct: 1   MDQTNNQIPIPIQNHHQEQ--------HVDQDLFDLLPDAILHLIFTKLTDAPSLIRCLT 60

Query: 63  VSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRLIRRL 122
           VSKRFASL SQSD+VFLAIPRLLLDSKSKSRIT  S S+STIRFF R+FLFTPFRLIRRL
Sbjct: 61  VSKRFASLTSQSDSVFLAIPRLLLDSKSKSRITRTSQSSSTIRFFVRRFLFTPFRLIRRL 120

Query: 123 ITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAEFGA 182
           I RTSQSSSGF +WYYWPSVALKELKGIKFVHMELPCCGDEIGSNH+GGALLKWKAEFG+
Sbjct: 121 IARTSQSSSGFSEWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHNGGALLKWKAEFGS 180

Query: 183 ELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDSESEMGDDELKLRIVWTISSLIAA 242
           ELKSCVVLGASSLRRKSIVES+LEVKETEENRL++DSESEMGD+ELKLRI+WTISSLIAA
Sbjct: 181 ELKSCVVLGASSLRRKSIVESDLEVKETEENRLDLDSESEMGDEELKLRIIWTISSLIAA 240

Query: 243 SMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGA-SVER 302
           SMRHYLVKQMVNDFPLL+TVLITDSTKQGRLCMEEK+VMELRESMKSS SSSIGA SV+R
Sbjct: 241 SMRHYLVKQMVNDFPLLKTVLITDSTKQGRLCMEEKEVMELRESMKSSLSSSIGASSVQR 300

Query: 303 TVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEEGEK 362
           TVIPDLKM+MWHVPVLDLPAAGFVMTAATL+VIRPSG GG+GLDGL+SIGD+FD EE EK
Sbjct: 301 TVIPDLKMEMWHVPVLDLPAAGFVMTAATLVVIRPSG-GGIGLDGLDSIGDEFDDEEREK 360

Query: 363 LGVYGEAVRKLMKLKRNYALE 383
           LGVYGEAVRKLMKLKRNYALE
Sbjct: 361 LGVYGEAVRKLMKLKRNYALE 372

[Close]

BLAST of Lsi06G005560 vs. NCBI nr
Match: XP_023530591.1 (F-box protein At4g18380-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.0 bits (1434), Expect = 1.3e-154
Identity = 300/388 (77.32%), Postives = 333/388 (85.82%), Query Frame = 0


Query: 3   MDPTKNQIQIPIQDQDQQQ---QQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIR 62
           MDP KNQ +I  + Q+QQQ   ++E+E+ +  D D+FDLLPDAILHLIF K+IDA SLIR
Sbjct: 1   MDPIKNQFEIRNRGQEQQQLVVEEEDEEDDDDDLDYFDLLPDAILHLIFNKLIDARSLIR 60

Query: 63  CLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFRLI 122
           CLAVSKRFASLISQSD VFLAIPR +LDSK KSR+  RS  NS IRFF RKF+FTPFR I
Sbjct: 61  CLAVSKRFASLISQSDTVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFRFI 120

Query: 123 RRLITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAE 182
           RR+ITRTS  SSGFGDWYYWPSVALKE +GIKFVHMELPCCGDEIGS H GG LLKWKAE
Sbjct: 121 RRVITRTSPPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWKAE 180

Query: 183 FGAELKSCVVLGASSLRRKSIVESELEVKETEENR-LEVDSESEMGDDELKLRIVWTISS 242
           FGAELKSCVVLGASSLRRKSIV S+ E KETEE R +E DSE+E+GD+ELKLRIVWTISS
Sbjct: 181 FGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTISS 240

Query: 243 LIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGAS 302
           LIAASMRHYLVKQMV DFP+LQ+V+ITDSTKQGRLCMEEKQ+ ELR+SMKSS+S+   + 
Sbjct: 241 LIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLCMEEKQLKELRDSMKSSTSNQ--SP 300

Query: 303 VERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEE 362
           VERTVIPDL MKMWHVPVLDLPA+G VMTAATL+VIRPS   GM LDGL+ +GD+FD EE
Sbjct: 301 VERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSST-GMALDGLDKMGDEFDAEE 360

Query: 363 GEKLGVYGEAVRKLMKLKRNYALEVNSF 387
            EK G YGEA RKLMKLKRNY LEVNSF
Sbjct: 361 TEKHGAYGEAARKLMKLKRNYTLEVNSF 385

[Close]

BLAST of Lsi06G005560 vs. NCBI nr
Match: XP_023004391.1 (F-box protein At4g18380-like [Cucurbita maxima])

HSP 1 Score: 555.1 bits (1429), Expect = 4.9e-154
Identity = 300/390 (76.92%), Postives = 334/390 (85.64%), Query Frame = 0


Query: 3   MDPTKNQIQIPIQDQDQQQ-----QQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSL 62
           MDP KNQ +I  + Q+QQQ     ++E++ ++  D D+FDLLPDAILHLIF K+IDA SL
Sbjct: 1   MDPIKNQFEIRNRGQEQQQLVVEEEEEDDDEDDDDLDYFDLLPDAILHLIFNKLIDARSL 60

Query: 63  IRCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKFLFTPFR 122
           IRCLAVSKRFASLISQSD VFLAIPR +LDSK KSR+  RS  NS IRFF RKF+FTPFR
Sbjct: 61  IRCLAVSKRFASLISQSDTVFLAIPRPVLDSKRKSRVGRRSPPNSLIRFFVRKFVFTPFR 120

Query: 123 LIRRLITRTSQSSSGFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWK 182
            IRR+ITRTS  SSGFGDWYYWPSVALKE +GIKFVHMELPCCGDEIGS H GG LLKWK
Sbjct: 121 FIRRVITRTSPPSSGFGDWYYWPSVALKEFRGIKFVHMELPCCGDEIGSIHGGGPLLKWK 180

Query: 183 AEFGAELKSCVVLGASSLRRKSIVESELEVKETEENR-LEVDSESEMGDDELKLRIVWTI 242
           AEFGAELKSCVVLGASSLRRKSIV S+ E KETEE R +E DSE+E+GD+ELKLRIVWTI
Sbjct: 181 AEFGAELKSCVVLGASSLRRKSIVHSDSEAKETEEERVVEADSETELGDEELKLRIVWTI 240

Query: 243 SSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIG 302
           SSLIAASMRHYLVKQMV DFP+LQ+V+ITDSTKQGRL MEEKQ+ ELR+SMKSS+S+   
Sbjct: 241 SSLIAASMRHYLVKQMVADFPMLQSVVITDSTKQGRLYMEEKQLKELRDSMKSSTSNQ-- 300

Query: 303 ASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDG 362
           + VERTVIPDL MKMWHVPVLDLPA+G VMTAATL+VIRPS A GM LDGL+ +GD+FD 
Sbjct: 301 SPVERTVIPDLHMKMWHVPVLDLPASGSVMTAATLVVIRPSSA-GMALDGLDKMGDEFDA 360

Query: 363 EEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
           EE EKLG YGEA RKLMKLKRNY LEVNSF
Sbjct: 361 EETEKLGAYGEAARKLMKLKRNYTLEVNSF 387

[Close]

BLAST of Lsi06G005560 vs. TAIR 10
Match: AT4G18380.1 (F-box family protein )

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46
Identity = 145/379 (38.26%), Postives = 205/379 (54.09%), Query Frame = 0


Query: 34  DFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSR 93
           D FD LPD+IL LIF  I D  +L RC  VSKRF SLI Q + VF+ +  ++ D  S S 
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 94  ITSRSLSNSTIRFFFRKF--LFTPFRLIRRLITRTSQSS------------SGFGD---- 153
           ++ +  S S    F   F  +F P + + + + R+  SS            SG  D    
Sbjct: 83  LSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIE 142

Query: 154 ----WYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAEFGAELKSCVVLG 213
                ++ P+  LK    IKF+ +ELP    E+G +   G LLKW+AEFG+ L++CV+LG
Sbjct: 143 QGGVTHHSPTQVLKNFDEIKFLKIELP--SGELGID--DGVLLKWRAEFGSTLENCVILG 202

Query: 214 ASSL----RRKSIVESELEVKETEENRLEVDSESEMGDDELKLRIVWTISSLIAASMRHY 273
           ASS+           S   V   E+N    +S    G   LKLR+VWTISSLIAAS RHY
Sbjct: 203 ASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGG--LKLRVVWTISSLIAASARHY 262

Query: 274 LVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDL 333
           L++ ++ +   L ++++TD   QG LCM   Q+ ELR    S+SS+S     +RT++P L
Sbjct: 263 LLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSAS-----KRTLVPAL 322

Query: 334 KMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEEGEKLGVYGE 387
            M++W+ P L+LP  G V+  ATL+ IRPS +     D +  +   FD         YG 
Sbjct: 323 NMRLWYAPSLELP-DGTVLKGATLVAIRPSESKKEVCD-VSWVSSAFDEP-------YGV 380

[Close]

BLAST of Lsi06G005560 vs. TAIR 10
Match: AT4G18380.2 (F-box family protein )

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46
Identity = 145/379 (38.26%), Postives = 205/379 (54.09%), Query Frame = 0


Query: 34  DFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLLLDSKSKSR 93
           D FD LPD+IL LIF  I D  +L RC  VSKRF SLI Q + VF+ +  ++ D  S S 
Sbjct: 23  DHFDNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVFVRVDCVISDDDSSSL 82

Query: 94  ITSRSLSNSTIRFFFRKF--LFTPFRLIRRLITRTSQSS------------SGFGD---- 153
           ++ +  S S    F   F  +F P + + + + R+  SS            SG  D    
Sbjct: 83  LSDKPRSASAASPFSAIFRLVFKPLQALGQFLKRSGSSSLPSGSSPSSLLISGGDDGEIE 142

Query: 154 ----WYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAEFGAELKSCVVLG 213
                ++ P+  LK    IKF+ +ELP    E+G +   G LLKW+AEFG+ L++CV+LG
Sbjct: 143 QGGVTHHSPTQVLKNFDEIKFLKIELP--SGELGID--DGVLLKWRAEFGSTLENCVILG 202

Query: 214 ASSL----RRKSIVESELEVKETEENRLEVDSESEMGDDELKLRIVWTISSLIAASMRHY 273
           ASS+           S   V   E+N    +S    G   LKLR+VWTISSLIAAS RHY
Sbjct: 203 ASSVIPPTNSDKTEASSAPVAAVEDNGSIPESFYTNGG--LKLRVVWTISSLIAASARHY 262

Query: 274 LVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSIGASVERTVIPDL 333
           L++ ++ +   L ++++TD   QG LCM   Q+ ELR    S+SS+S     +RT++P L
Sbjct: 263 LLQPIIAEHKTLDSLVLTDVDGQGVLCMNRDQLEELRVKPLSASSAS-----KRTLVPAL 322

Query: 334 KMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFDGEEGEKLGVYGE 387
            M++W+ P L+LP  G V+  ATL+ IRPS +     D +  +   FD         YG 
Sbjct: 323 NMRLWYAPSLELP-DGTVLKGATLVAIRPSESKKEVCD-VSWVSSAFDEP-------YGV 380

[Close]

BLAST of Lsi06G005560 vs. TAIR 10
Match: AT1G30200.2 (F-box family protein )

HSP 1 Score: 179.1 bits (453), Expect = 6.8e-45
Identity = 138/391 (35.29%), Postives = 210/391 (53.71%), Query Frame = 0


Query: 26  EQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLL 85
           E Q     D FDLLPD++L LIF K+ D   L RC  VS+RF SL+   + V + +  ++
Sbjct: 16  EPQSLTSFDHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVI 75

Query: 86  LDSKSKSRITSRSLSNST----------------IRFFFRKFLFTPFRLIRRLITRTSQS 145
            D  S S   +   S +T                 R  F   +F PF+++ +++     S
Sbjct: 76  SDDDSSSSDENHRFSLNTASISDAGGAGGSFSALFRLVFAP-IFKPFQMLGQILGPKRSS 135

Query: 146 SS----------GFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAE 205
           SS            G  ++ P+  LK    I+F+ +ELP    E+G     G LLKW+A+
Sbjct: 136 SSFDASFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELPT--GELGI--EDGILLKWRAD 195

Query: 206 FGAELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDS----ESEMGDDELKLRIVWT 265
           FG+ L +C++LGASS+ + + V++        EN ++ D+    ES   +  LKLR+VWT
Sbjct: 196 FGSTLDNCMILGASSVIQSNSVKN-------HENSVDEDNGNIPESFYTNGGLKLRVVWT 255

Query: 266 ISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSI 325
           ISSLIAAS RHYL++ ++N+   L  ++++D+  QG LCM  +Q+ ELR +  S+SS+S 
Sbjct: 256 ISSLIAASARHYLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSAS- 315

Query: 326 GASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFD 385
               +RT++P L M++W+ P LDLP  G V+  ATL+ IRPS +     D    + D F+
Sbjct: 316 ----KRTLVPALNMRLWYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDA-SWLSDAFE 375

Query: 386 GEEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
              G         V K++  +R Y LE+NSF
Sbjct: 376 EPFG--------TVAKMLIKRRTYCLEMNSF 379

[Close]

BLAST of Lsi06G005560 vs. TAIR 10
Match: AT1G30200.1 (F-box family protein )

HSP 1 Score: 179.1 bits (453), Expect = 6.8e-45
Identity = 138/391 (35.29%), Postives = 210/391 (53.71%), Query Frame = 0


Query: 26  EQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQSDAVFLAIPRLL 85
           E Q     D FDLLPD++L LIF K+ D   L RC  VS+RF SL+   + V + +  ++
Sbjct: 16  EPQSLTSFDHFDLLPDSLLLLIFDKVADVKDLGRCCIVSRRFHSLVPFVENVLVRVDCVI 75

Query: 86  LDSKSKSRITSRSLSNST----------------IRFFFRKFLFTPFRLIRRLITRTSQS 145
            D  S S   +   S +T                 R  F   +F PF+++ +++     S
Sbjct: 76  SDDDSSSSDENHRFSLNTASISDAGGAGGSFSALFRLVFAP-IFKPFQMLGQILGPKRSS 135

Query: 146 SS----------GFGDWYYWPSVALKELKGIKFVHMELPCCGDEIGSNHSGGALLKWKAE 205
           SS            G  ++ P+  LK    I+F+ +ELP    E+G     G LLKW+A+
Sbjct: 136 SSFDASFSAINDEIGVTHHSPTQVLKNFGEIRFLKIELPT--GELGI--EDGILLKWRAD 195

Query: 206 FGAELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDS----ESEMGDDELKLRIVWT 265
           FG+ L +C++LGASS+ + + V++        EN ++ D+    ES   +  LKLR+VWT
Sbjct: 196 FGSTLDNCMILGASSVIQSNSVKN-------HENSVDEDNGNIPESFYTNGGLKLRVVWT 255

Query: 266 ISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGRLCMEEKQVMELRESMKSSSSSSI 325
           ISSLIAAS RHYL++ ++N+   L  ++++D+  QG LCM  +Q+ ELR +  S+SS+S 
Sbjct: 256 ISSLIAASARHYLLQPIINEHKSLDRLVLSDADGQGVLCMNREQLEELRVTPLSASSAS- 315

Query: 326 GASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLMVIRPSGAGGMGLDGLESIGDDFD 385
               +RT++P L M++W+ P LDLP  G V+  ATL+ IRPS +     D    + D F+
Sbjct: 316 ----KRTLVPALNMRLWYAPELDLP-DGTVLKGATLVAIRPSESKKEVCDA-SWLSDAFE 375

Query: 386 GEEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
              G         V K++  +R Y LE+NSF
Sbjct: 376 EPFG--------TVAKMLIKRRTYCLEMNSF 379

[Close]

BLAST of Lsi06G005560 vs. TAIR 10
Match: AT5G46170.1 (F-box family protein )

HSP 1 Score: 169.1 bits (427), Expect = 7.0e-42
Identity = 140/414 (33.82%), Postives = 213/414 (51.45%), Query Frame = 0


Query: 14  IQDQDQQQQQEEEQQEHVDQDFFDLLPDAILHLIFTKIIDAPSLIRCLAVSKRFASLISQ 73
           I   D   +   E  + ++ D FD LPD+IL L+F KI D  +L RC  VS+RF SL+ Q
Sbjct: 5   IPRSDPPSRIHPEPPQTLEIDHFDHLPDSILLLVFNKIGDVKALGRCCVVSRRFHSLVPQ 64

Query: 74  SDAVFLAIPRLLLDSKSKSRITSRSLSNSTIRFFFRKF------LFTPFRLIRRLI-TRT 133
            D V + +  ++ D  S S  + +S S S+   F   F      +  P + + + + T+ 
Sbjct: 65  VDNVVVRVDCVISDDDSSSLSSIKSRSGSSAGSFSAIFRLVVGGIVKPLQALGQFLGTKR 124

Query: 134 SQSSSG----------------------FGDWYYWPSVALKELKGIKFVHMELPCCGDEI 193
           S SS G                       G  ++ P+  LK    I+++ +ELP    E+
Sbjct: 125 SSSSCGGSGSSSSSLSISGDDDGGEIEQGGVTHHSPTQVLKNFDEIRYLRIELP--SGEL 184

Query: 194 GSNHSGGALLKWKAEFGAELKSCVVLGASSLRRKSIVESELEVKETEENRLEVDSESEMG 253
           G +   G LLKW+AEFG+ L +CV+LGASS+    I  + + V +  +    V++     
Sbjct: 185 GID--DGVLLKWRAEFGSTLDNCVILGASSV----IPPNPMRVSQACDTTTVVEAPGSGS 244

Query: 254 DDE------------LKLRIVWTISSLIAASMRHYLVKQMVNDFPLLQTVLITDSTKQGR 313
           DD             LKLR+VWTISSLIAAS RHYL++ ++ +   L ++++TDS  QG 
Sbjct: 245 DDNGSIPESFYTNGGLKLRVVWTISSLIAASARHYLLQPIIAEHKTLDSLVLTDSDGQGV 304

Query: 314 LCMEEKQVMELRESMKSSSSSSIGASVERTVIPDLKMKMWHVPVLDLPAAGFVMTAATLM 373
           LCM   Q+ ELR    ++SS+S     +RT++P L M++W+ P L+LP  G V+  ATL+
Sbjct: 305 LCMNRDQLEELRVKPLAASSAS-----KRTLVPALNMRLWYAPTLELP-DGTVLKGATLV 364

Query: 374 VIRPSGAGGMGLDGLESIGDDFDGEEGEKLGVYGEAVRKLMKLKRNYALEVNSF 387
            IRPS      +  +  +   F+         Y  A + L+K +R Y LE+NSF
Sbjct: 365 AIRPS-ESKKEVSDISWVSSAFEEP-------YETAAKMLVK-RRTYCLEMNSF 395

The following BLAST results are available for this feature:

BLAST of Lsi06G005560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49508	2.3e-45	38.26	F-box protein At4g18380 OS=Arabidopsis thaliana OX=3702 GN=At4g18380 PE=2 SV=1	[more]
Q9C534	9.6e-44	35.29	F-box protein At1g30200 OS=Arabidopsis thaliana OX=3702 GN=At1g30200 PE=2 SV=1	[more]
Q9FNK5	9.9e-41	33.82	F-box protein At5g46170 OS=Arabidopsis thaliana OX=3702 GN=At5g46170 PE=2 SV=1	[more]
Q9C9S2	9.3e-39	34.56	F-box protein AUF1 OS=Arabidopsis thaliana OX=3702 GN=AUF1 PE=1 SV=1	[more]
Q9LM18	1.5e-36	35.13	F-box protein AUF2 OS=Arabidopsis thaliana OX=3702 GN=AUF2 PE=2 SV=1	[more]

BLAST of Lsi06G005560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KS00	2.4e-154	76.92	F-box protein At4g18380-like OS=Cucurbita maxima OX=3661 GN=LOC111497724 PE=4 SV...	[more]
A0A6J1ES21	2.6e-153	76.80	F-box protein At4g18380-like OS=Cucurbita moschata OX=3662 GN=LOC111435352 PE=4 ...	[more]
A0A5D3DW74	1.7e-152	78.61	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold225G00880 ...	[more]
A0A5A7UJD0	2.9e-152	78.21	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G002200...	[more]
A0A1S3BP50	2.9e-152	78.21	F-box protein At4g18380-like OS=Cucumis melo OX=3656 GN=LOC103491999 PE=4 SV=1	[more]

BLAST of Lsi06G005560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878550.1	1.6e-176	87.01	F-box protein At4g18380-like isoform X3 [Benincasa hispida]	[more]
XP_038878549.1	4.3e-174	86.88	F-box protein At4g18380-like isoform X2 [Benincasa hispida]	[more]
XP_038878548.1	4.3e-174	86.88	F-box protein At4g18380-like isoform X1 [Benincasa hispida]	[more]
XP_023530591.1	1.3e-154	77.32	F-box protein At4g18380-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004391.1	4.9e-154	76.92	F-box protein At4g18380-like [Cucurbita maxima]	[more]

BLAST of Lsi06G005560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18380.1	1.6e-46	38.26	F-box family protein	[more]
AT4G18380.2	1.6e-46	38.26	F-box family protein	[more]
AT1G30200.2	6.8e-45	35.29	F-box family protein	[more]
AT1G30200.1	6.8e-45	35.29	F-box family protein	[more]
AT5G46170.1	7.0e-42	33.82	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 200..220
None	No IPR available	GENE3D	1.20.1280.50		coord: 17..76 e-value: 7.3E-7 score: 30.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR31215:SF21	FAMILY PROTEIN, PUTATIVE-RELATED	coord: 25..386
IPR044809	F-box protein AUF1-like	PANTHER	PTHR31215	OS05G0510400 PROTEIN-RELATED	coord: 25..386
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 22..81

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G005560.1	Lsi06G005560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding