Lsi06G005320 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G005320
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionCCHC-type domain-containing protein
Locationchr06: 6568109 .. 6568855 (+)
RNA-Seq ExpressionLsi06G005320
SyntenyLsi06G005320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAACCTTTTTCAATCCATGTTTGAGCTCAAACTTTGGAGGAGGAAGTCATGCTTTAGATAGTGAAGAATACATCAAAAAAGGGAACAATCTATTGAAATGGAAGATCCCAAAAGTTCCCACAACCAAAATCTACAAAAGAAAGTCATTCACTTTCTTCTCTGATCCATCCATCAAAACCAAAGAAGAAACAATGTCTTGTGAAAATGGGAGCCAAGGTTTTAGGTTAATATCTGAAAATCCCTTCATGGTTGGTCTCAATGACAAAAGATTCTACTCCATGTTGAATGTTGGGATGATTCAAATTGGTGTAAAAACTTTGACCACAAAAATACCTTCAAATGCTTCAATTATTCTATGTGTTTTTGACACTAGAAATGACAATTTTGAAAATTCAATTTTGGGGTTGGTGGAATCAAATCTAAGTGATGGTCCTATGTTTTTCAACATATTTCCAAACATTACAATGTCTTTGTTTCATCCTAAGTTGTCGGAGTCTTTGGTTTTGATTGCTATTGTTCAAGGTTTTGAGCAGCTTCCTGAAGGGACAAAACCAATTAGTTTAATGTGGAGGACATGTTACAAGCTACAAGGCAGTGATTTGCCAGATGCTTTGCTTGAGAGCCCACAAGGCAAAACTGTGTTTTTTCAAACAGATTTTGAGAAGTCCGAGGTTGCTGTCCAGAAGGTTTCAAAATGGGATGAAGTTGTTTGCAAAGTTAGGAGTATTATAATGAAGCAGTAA

mRNA sequence

ATGCCAACCTTTTTCAATCCATGTTTGAGCTCAAACTTTGGAGGAGGAAGTCATGCTTTAGATAGTGAAGAATACATCAAAAAAGGGAACAATCTATTGAAATGGAAGATCCCAAAAGTTCCCACAACCAAAATCTACAAAAGAAAGTCATTCACTTTCTTCTCTGATCCATCCATCAAAACCAAAGAAGAAACAATGTCTTGTGAAAATGGGAGCCAAGGTTTTAGGTTAATATCTGAAAATCCCTTCATGGTTGGTCTCAATGACAAAAGATTCTACTCCATGTTGAATGTTGGGATGATTCAAATTGGTGTAAAAACTTTGACCACAAAAATACCTTCAAATGCTTCAATTATTCTATGTGTTTTTGACACTAGAAATGACAATTTTGAAAATTCAATTTTGGGGTTGGTGGAATCAAATCTAAGTGATGGTCCTATGTTTTTCAACATATTTCCAAACATTACAATGTCTTTGTTTCATCCTAAGTTGTCGGAGTCTTTGGTTTTGATTGCTATTGTTCAAGGTTTTGAGCAGCTTCCTGAAGGGACAAAACCAATTAGTTTAATGTGGAGGACATGTTACAAGCTACAAGGCAGTGATTTGCCAGATGCTTTGCTTGAGAGCCCACAAGGCAAAACTGTGTTTTTTCAAACAGATTTTGAGAAGTCCGAGGTTGCTGTCCAGAAGGTTTCAAAATGGGATGAAGTTGTTTGCAAAGTTAGGAGTATTATAATGAAGCAGTAA

Coding sequence (CDS)

ATGCCAACCTTTTTCAATCCATGTTTGAGCTCAAACTTTGGAGGAGGAAGTCATGCTTTAGATAGTGAAGAATACATCAAAAAAGGGAACAATCTATTGAAATGGAAGATCCCAAAAGTTCCCACAACCAAAATCTACAAAAGAAAGTCATTCACTTTCTTCTCTGATCCATCCATCAAAACCAAAGAAGAAACAATGTCTTGTGAAAATGGGAGCCAAGGTTTTAGGTTAATATCTGAAAATCCCTTCATGGTTGGTCTCAATGACAAAAGATTCTACTCCATGTTGAATGTTGGGATGATTCAAATTGGTGTAAAAACTTTGACCACAAAAATACCTTCAAATGCTTCAATTATTCTATGTGTTTTTGACACTAGAAATGACAATTTTGAAAATTCAATTTTGGGGTTGGTGGAATCAAATCTAAGTGATGGTCCTATGTTTTTCAACATATTTCCAAACATTACAATGTCTTTGTTTCATCCTAAGTTGTCGGAGTCTTTGGTTTTGATTGCTATTGTTCAAGGTTTTGAGCAGCTTCCTGAAGGGACAAAACCAATTAGTTTAATGTGGAGGACATGTTACAAGCTACAAGGCAGTGATTTGCCAGATGCTTTGCTTGAGAGCCCACAAGGCAAAACTGTGTTTTTTCAAACAGATTTTGAGAAGTCCGAGGTTGCTGTCCAGAAGGTTTCAAAATGGGATGAAGTTGTTTGCAAAGTTAGGAGTATTATAATGAAGCAGTAA

Protein sequence

MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSIIMKQ
Homology
BLAST of Lsi06G005320 vs. ExPASy TrEMBL
Match: A0A0A0LZS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.4e-107
Identity = 198/247 (80.16%), Postives = 215/247 (87.04%), Query Frame = 0

Query: 1   MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIK 60
           M TF   C SSNFGGGSH+LDSEEYIKKG NLLKWKIPK+PTTKIYK   F FFSDP IK
Sbjct: 1   MSTF---CWSSNFGGGSHSLDSEEYIKKGKNLLKWKIPKIPTTKIYKSNPFIFFSDPFIK 60

Query: 61  TKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIIL 120
           TKEETM CENGSQ FRLIS NP +    +KRFY+ LN+GMIQIGVKTLTTKIPSNASIIL
Sbjct: 61  TKEETMPCENGSQVFRLISGNPMVDNFQEKRFYTRLNMGMIQIGVKTLTTKIPSNASIIL 120

Query: 121 CVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQL 180
           CVFDTRNDNFE+SILGLVES L DGP+FFNIFPNITM +FHPKL ES VLIA+VQGFEQL
Sbjct: 121 CVFDTRNDNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQL 180

Query: 181 PEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCK 240
           P+GT PISLMWRTCYKLQ S LP AL+ESPQGKTVFFQT+FE S+VA QKVS+WDEV+CK
Sbjct: 181 PQGTSPISLMWRTCYKLQASALPTALIESPQGKTVFFQTNFENSKVADQKVSQWDEVICK 240

Query: 241 VRSIIMK 248
           VR+ IMK
Sbjct: 241 VRNNIMK 244

BLAST of Lsi06G005320 vs. ExPASy TrEMBL
Match: A0A5D3D5V1 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE=4 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 1.0e-78
Identity = 147/179 (82.12%), Postives = 160/179 (89.39%), Query Frame = 0

Query: 66  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDT 125
           M CENGSQ FRLI +NP +    +KRF +MLN+GMIQIGVKTLTTKIPSNASIILCVFDT
Sbjct: 1   MPCENGSQAFRLIYDNPILASFQEKRFCTMLNMGMIQIGVKTLTTKIPSNASIILCVFDT 60

Query: 126 RNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTK 185
           RNDNFE+SILGLVE+ LSDGPMFFNIFPNITMSLFHPKL ESLVLIA+VQGFEQLP+GT 
Sbjct: 61  RNDNFEDSILGLVEAKLSDGPMFFNIFPNITMSLFHPKLCESLVLIAMVQGFEQLPQGTS 120

Query: 186 PISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI 245
           PISLMWRTCYKLQGS  P AL+ESPQGKTVFFQTDFE S+VAVQKVS+WDEVVCK   +
Sbjct: 121 PISLMWRTCYKLQGSAFPTALIESPQGKTVFFQTDFENSKVAVQKVSEWDEVVCKEEDV 179

BLAST of Lsi06G005320 vs. ExPASy TrEMBL
Match: A0A5A7U9X3 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 8.8e-78
Identity = 146/179 (81.56%), Postives = 159/179 (88.83%), Query Frame = 0

Query: 66  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDT 125
           M CENGSQ FRLI +NP +    +KRF +MLN+GMIQIGVKTLTTKI SNASIILCVFDT
Sbjct: 1   MPCENGSQAFRLIYDNPILASFQEKRFCTMLNMGMIQIGVKTLTTKISSNASIILCVFDT 60

Query: 126 RNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTK 185
           RNDNFE+SILGLVE+ LSDGPMFFNIFPNITMSLFHPKL ESLVLIA+VQGFEQLP+GT 
Sbjct: 61  RNDNFEDSILGLVEAKLSDGPMFFNIFPNITMSLFHPKLCESLVLIAMVQGFEQLPQGTS 120

Query: 186 PISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI 245
           PISLMWRTCYKLQGS  P AL+ESPQGKTVFFQTDFE S+VAVQKVS+WDEVVCK   +
Sbjct: 121 PISLMWRTCYKLQGSAFPTALIESPQGKTVFFQTDFENSKVAVQKVSEWDEVVCKEEDV 179

BLAST of Lsi06G005320 vs. ExPASy TrEMBL
Match: A0A0A0LXM3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.9e-52
Identity = 114/247 (46.15%), Postives = 163/247 (65.99%), Query Frame = 0

Query: 1   MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIY--KRKSFTFF---- 60
           M  FF  C S NF  G H+L+ EEY++KG +L+KWK+P+VP  KIY  +RK+  F     
Sbjct: 1   MSLFFKSCSSKNF-VGDHSLEEEEYVEKGKSLVKWKMPRVPIHKIYEERRKNHFFIFPSK 60

Query: 61  SDPSIKTKEETMSCENGSQGFRLISENPFMVGLNDK-RFYSMLNVGMIQIGVKTLTTKIP 120
           +DPSI+T E  +S  N    F+L  + P       +  F++ +N+G++QIGVKTLT KIP
Sbjct: 61  NDPSIRTTEGQISFGNEGGSFKLYGQTPSSYCRRRRISFFNTMNIGLVQIGVKTLTKKIP 120

Query: 121 SNASIILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAI 180
            NASIILC+ D R +  E+S+L LVES L DGP +FN+FPNI +SLF   ++  L +  +
Sbjct: 121 PNASIILCLRDNRIEKLEDSLLALVESKLGDGPFYFNVFPNINLSLFFSSITNVLSVHVL 180

Query: 181 VQGFEQLPEGTKPISLMWRTCYKLQGSDL-PDALLESPQGKTVFFQTDF--EKSEVAVQK 238
           V+G +++P+G+ PI +  RTCYKL  +D   +AL+ESP GKTVFFQ +   +  +  VQK
Sbjct: 181 VKGLDKIPKGSAPIVVTCRTCYKLNQNDFGSEALIESPVGKTVFFQIEIFEDDDDDVVQK 240

BLAST of Lsi06G005320 vs. ExPASy TrEMBL
Match: A0A438I6T6 (CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_032413 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 2.6e-29
Identity = 82/222 (36.94%), Postives = 132/222 (59.46%), Query Frame = 0

Query: 20  LDSEE--YIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIKTKEETMSCENGSQGFRL 79
           ++SEE  Y K  N+L  WK+PKV   +IYK+ +F FF+D +IKT E T+S E   Q  RL
Sbjct: 13  VNSEEINYPKIQNDLDDWKLPKVSNQEIYKKGTFKFFTDYTIKTSEMTVSLEQDDQVIRL 72

Query: 80  ISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDTRNDNFENSILGL 139
           +      V  + K  Y+ ++ GMIQ+  K L T++  N +I++C+ D R+  + +SI+G 
Sbjct: 73  LDNR--SVEKHKKDGYNFIHFGMIQVAAKPL-TRLGLNTAIVMCLRDNRHLEYRDSIIGA 132

Query: 140 VESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTKPISLMWRTCYKL 199
           V++ L+DGP++F  +PN T+ L    + +S+VL     GF+  P G  P+S++ R  YK 
Sbjct: 133 VQAGLNDGPVYFQCYPNFTVRLRDADILDSVVLHIKTHGFKIKP-GNSPVSIITRFAYKS 192

Query: 200 QGSDL-PDALLESPQGKTVFFQTD-FEKSEVAVQKVSKWDEV 238
             + +   AL  SP+G+T +F +D  +KS+  + K   W +V
Sbjct: 193 MNTSVGSGALCTSPKGETTYFHSDMLDKSDFIIPKKILWKDV 230

BLAST of Lsi06G005320 vs. NCBI nr
Match: KGN66494.1 (hypothetical protein Csa_006902 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 4.9e-107
Identity = 198/247 (80.16%), Postives = 215/247 (87.04%), Query Frame = 0

Query: 1   MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIK 60
           M TF   C SSNFGGGSH+LDSEEYIKKG NLLKWKIPK+PTTKIYK   F FFSDP IK
Sbjct: 1   MSTF---CWSSNFGGGSHSLDSEEYIKKGKNLLKWKIPKIPTTKIYKSNPFIFFSDPFIK 60

Query: 61  TKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIIL 120
           TKEETM CENGSQ FRLIS NP +    +KRFY+ LN+GMIQIGVKTLTTKIPSNASIIL
Sbjct: 61  TKEETMPCENGSQVFRLISGNPMVDNFQEKRFYTRLNMGMIQIGVKTLTTKIPSNASIIL 120

Query: 121 CVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQL 180
           CVFDTRNDNFE+SILGLVES L DGP+FFNIFPNITM +FHPKL ES VLIA+VQGFEQL
Sbjct: 121 CVFDTRNDNFEDSILGLVESKLIDGPIFFNIFPNITMPIFHPKLLESFVLIAMVQGFEQL 180

Query: 181 PEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCK 240
           P+GT PISLMWRTCYKLQ S LP AL+ESPQGKTVFFQT+FE S+VA QKVS+WDEV+CK
Sbjct: 181 PQGTSPISLMWRTCYKLQASALPTALIESPQGKTVFFQTNFENSKVADQKVSQWDEVICK 240

Query: 241 VRSIIMK 248
           VR+ IMK
Sbjct: 241 VRNNIMK 244

BLAST of Lsi06G005320 vs. NCBI nr
Match: XP_038880673.1 (uncharacterized protein LOC120072292 [Benincasa hispida])

HSP 1 Score: 354.0 bits (907), Expect = 1.1e-93
Identity = 178/247 (72.06%), Postives = 195/247 (78.95%), Query Frame = 0

Query: 1   MPTFFNPCLSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPSIK 60
           M T F PC SSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKR  FTFFSDPSIK
Sbjct: 1   MATLFKPCCSSNFGGGSHALDSEEYIKKGNNLLKWKIPKVPTTKIYKRNPFTFFSDPSIK 60

Query: 61  TKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIIL 120
           T+EE MSCENGSQ FRLI++NP M   ND RFY+ +NVGMIQIGVK +TTKIPSNASIIL
Sbjct: 61  TEEEKMSCENGSQAFRLIAKNPIMASFNDNRFYTTINVGMIQIGVKIMTTKIPSNASIIL 120

Query: 121 CVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQL 180
           CVFD+RN+NFE++ILGLVESNL                                 GFEQL
Sbjct: 121 CVFDSRNENFEDAILGLVESNL---------------------------------GFEQL 180

Query: 181 PEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCK 240
           PEGT+PISLMWRTCYKLQ S LP+ALLESPQGKTV+FQTD + S+VAVQKVSKWDEVVCK
Sbjct: 181 PEGTRPISLMWRTCYKLQESALPNALLESPQGKTVYFQTDLQNSKVAVQKVSKWDEVVCK 214

Query: 241 VRSIIMK 248
           +R+IIMK
Sbjct: 241 LRNIIMK 214

BLAST of Lsi06G005320 vs. NCBI nr
Match: TYK18873.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 303.1 bits (775), Expect = 2.2e-78
Identity = 147/179 (82.12%), Postives = 160/179 (89.39%), Query Frame = 0

Query: 66  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDT 125
           M CENGSQ FRLI +NP +    +KRF +MLN+GMIQIGVKTLTTKIPSNASIILCVFDT
Sbjct: 1   MPCENGSQAFRLIYDNPILASFQEKRFCTMLNMGMIQIGVKTLTTKIPSNASIILCVFDT 60

Query: 126 RNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTK 185
           RNDNFE+SILGLVE+ LSDGPMFFNIFPNITMSLFHPKL ESLVLIA+VQGFEQLP+GT 
Sbjct: 61  RNDNFEDSILGLVEAKLSDGPMFFNIFPNITMSLFHPKLCESLVLIAMVQGFEQLPQGTS 120

Query: 186 PISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI 245
           PISLMWRTCYKLQGS  P AL+ESPQGKTVFFQTDFE S+VAVQKVS+WDEVVCK   +
Sbjct: 121 PISLMWRTCYKLQGSAFPTALIESPQGKTVFFQTDFENSKVAVQKVSEWDEVVCKEEDV 179

BLAST of Lsi06G005320 vs. NCBI nr
Match: KAA0051217.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 300.1 bits (767), Expect = 1.8e-77
Identity = 146/179 (81.56%), Postives = 159/179 (88.83%), Query Frame = 0

Query: 66  MSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASIILCVFDT 125
           M CENGSQ FRLI +NP +    +KRF +MLN+GMIQIGVKTLTTKI SNASIILCVFDT
Sbjct: 1   MPCENGSQAFRLIYDNPILASFQEKRFCTMLNMGMIQIGVKTLTTKISSNASIILCVFDT 60

Query: 126 RNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFEQLPEGTK 185
           RNDNFE+SILGLVE+ LSDGPMFFNIFPNITMSLFHPKL ESLVLIA+VQGFEQLP+GT 
Sbjct: 61  RNDNFEDSILGLVEAKLSDGPMFFNIFPNITMSLFHPKLCESLVLIAMVQGFEQLPQGTS 120

Query: 186 PISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVVCKVRSI 245
           PISLMWRTCYKLQGS  P AL+ESPQGKTVFFQTDFE S+VAVQKVS+WDEVVCK   +
Sbjct: 121 PISLMWRTCYKLQGSAFPTALIESPQGKTVFFQTDFENSKVAVQKVSEWDEVVCKEEDV 179

BLAST of Lsi06G005320 vs. NCBI nr
Match: KAG6588194.1 (hypothetical protein SDJN03_16759, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.5 bits (659), Expect = 6.1e-65
Identity = 138/250 (55.20%), Postives = 159/250 (63.60%), Query Frame = 0

Query: 1   MPTFFNPCLSSNFGGGS--HALDSEEYIKKGNNLLKWKIPKVPTTKIYKRKSFTFFSDPS 60
           M TF  PC SS   GG   HALD+EE+IKKGNNLL WKIPKVPT+KIYK   F F SDPS
Sbjct: 1   MATFLKPCWSSKARGGGQRHALDNEEFIKKGNNLLNWKIPKVPTSKIYKTNPFNFLSDPS 60

Query: 61  IKTKEETMSCENGSQGFRLISENPFMVGLNDKRFYSMLNVGMIQIGVKTLTTKIPSNASI 120
           IKTK+  M+C NG+Q   LI E+PF+  L  KRFYSM NVGMIQIG KTLT KIP NA+I
Sbjct: 61  IKTKQVEMACGNGTQATSLILESPFIASLRSKRFYSMFNVGMIQIGAKTLTKKIPLNATI 120

Query: 121 ILCVFDTRNDNFENSILGLVESNLSDGPMFFNIFPNITMSLFHPKLSESLVLIAIVQGFE 180
            LCVFDTR + FE+SILG+VE+ L                                    
Sbjct: 121 TLCVFDTRTEKFEDSILGMVEARL------------------------------------ 180

Query: 181 QLPEGTKPISLMWRTCYKLQGSDLPDALLESPQGKTVFFQTDFEKSEVAVQKVSKWDEVV 240
                TKPI L WRTCYKLQ S L +AL+ES  G+TVFFQTDFE S+VAV KVS WD+V+
Sbjct: 181 ----WTKPIRLTWRTCYKLQNSALAEALIESRHGRTVFFQTDFENSDVAVPKVSIWDDVL 210

Query: 241 CKVRSIIMKQ 249
           CKV  +   +
Sbjct: 241 CKVLDLFQSE 210

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0LZS02.4e-10780.16Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614640 PE=4 SV=1[more]
A0A5D3D5V11.0e-7882.12Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00750 PE... [more]
A0A5A7U9X38.8e-7881.56Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1250G00180 P... [more]
A0A0A0LXM34.9e-5246.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G614140 PE=4 SV=1[more]
A0A438I6T62.6e-2936.94CCHC-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_032413 P... [more]
Match NameE-valueIdentityDescription
KGN66494.14.9e-10780.16hypothetical protein Csa_006902 [Cucumis sativus][more]
XP_038880673.11.1e-9372.06uncharacterized protein LOC120072292 [Benincasa hispida][more]
TYK18873.12.2e-7882.12polyprotein [Cucumis melo var. makuwa][more]
KAA0051217.11.8e-7781.56polyprotein [Cucumis melo var. makuwa][more]
KAG6588194.16.1e-6555.20hypothetical protein SDJN03_16759, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028919Viral movement proteinPFAMPF01107MPcoord: 67..199
e-value: 3.5E-11
score: 43.0
NoneNo IPR availablePANTHERPTHR46249FAMILY NOT NAMEDcoord: 34..235
NoneNo IPR availablePANTHERPTHR46249:SF37VIRAL MOVEMENT PROTEINcoord: 34..235

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G005320.1Lsi06G005320.1mRNA