Lsi06G004880 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G004880
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Descriptioncyanogenic beta-glucosidase-like
Locationchr06: 5698091 .. 5707989 (+)
RNA-Seq ExpressionLsi06G004880
SyntenyLsi06G004880
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGTATCACATATCTAACAAGTTTTCGTTTTTAGAAACAAGACGTAAGGTAAATGTTAACACATTCAAGTGAAATTGAAAAAACCCTTCATTGAAAATTAAATGATATACATAATACATTGCTTTTGTTTTGAAAACACGTGCCAAAACAAGACGAAATGTACAAATATGTGAAAATGATCATTTAATGATTAGAAAAAACAAAACCCAAAAGATATCATGGAAAGATATGATGTCTTTGAAAAACTTCATATGGTAGAAAGTTTGTGTATTCAATTAATTATATTGTTATTTTTGACTCTTCCTAAGTCATTCACACATGTGAAGTCATTTATGTGTGTAAATAAGTAAGGTCGGGACATTCTTCGGTGAAATCATTTCACATTAGAAAAACTTAAGGGAACCTCATCCTCTTTATAAAATAGACGAGTTACTCATCTCATAGTCAATTAGTTTTAAGACGATGGAACTTTGTGTTGTCTAATATATGGTATTAGATCACATGAAGTTCAAATAGGCATTCAGTCCCATCCGAAAACTAAGATCCGATCCAAGAATGATGAACCCAAAAAGACACAATCTTGAGGGGCGTATTGAGGATTAGACATTAAAAAAATCAAGAGATTTCATAGGTTGTCTTTATAAGATAGATAAGTTATTCCTCTTATTGTCAACAAACAAAATAACATATGCTCTATCTTAAAGGGGTATTTCCAATTTTTATAAATGATGATTTCATGACGTTTCGTAGTAATTCATTTCATTATTATATGAAAACGATTTCTCTTATCTTGTAGGCCATATCATTAACTATATCAAAATAATTTTTCTTATCTTGTAGGCCATGGACCGTTTGCTAACTCTTAATCAATGATTTGTTTTTTGTCTAAAGAAAAGACCAAGGACAGCTATGGAAAATAAAAAAGGATTAAATGAATGGTTCTTAGAAATATAAAGATAAAAGTAAATATATAATAATAATGACAAGCTTTTTCTTATATGGCTTCCCATACCCTTCATTTATAAAGAGGAGTGTGTGGAGAAGAATTCTCTTATCCCCAAACAAAAAATAAAGGATGGGTTTCAAACAAAGTGATGCCTTTCTTAGCTCTGTATTTCTTCTCTTTCTTGTAGCTCCACACTCTATTGATGTATTAAAAAGAAGCAGCTTTCCTAAAGGTTTCATTTTTGGCTCAGCATCTTCTGCTTATCAGGTGAGAAAGAGTAACATTTCATTTGCAAGTAACTTCATTACATAAACTTCATTTTTAGGTTAAATTGCAAATTTAGTCGTTTGAAAAAGTTAGAGTTTAGTCGTTATGATTTGATCAAATCCTCCGAAATAGTCCCTAAAGTAGAGACTAAATTCTAACTTTTTCCAAACCATGGTGACTAAATTTTAACTTTCTTCAAATTATAGGAACTAAATCTTAACTTTTTACAAATAATAGAGACTAAATTTCAAAACTATAGGGACTAAATTTGTAGTATGTGACAATAGCTATAGGACGATATTATATCTTTGGCTGGTTTATGGAGTACAAAATCTTCTCTTTTTTGTAATTACGATGCTTCTTCCACTTTTTTAAATTGGAAGTCTTTTTTGTAATCCCTTCCTTTTGCCACTGCCTGTTTTCCTTTTGATTTGAGCTTATCTCTAGCTCTCTGTACATTTTTCTTCATTAATAATACATCGCTATTGGCATCGGAGTATGATGAGGGCGCTACGGAGGTGTCAACCTAGTTCTAATGTCCTGGTACACTCCCTGATCCCACTCTCCTCTGGTATTTTGTTCAAAAAAATTTGTGGTGTGCGACCGAGTTTGGGGCATGAACGAGCGGTGGAGACTGGCACGGCTGGAGCTAACGAATGGCGACAGCTTCCACGAAGAGATGAAGAAGAAGAAATTCTTTTTTTTTTTTTTTCTTTCTTTTAGCACGCTAGGCTACTTAAAATATATATATATATATTTTACCCTTTCCCATATATATACACTTCCTTTTTCCTTTTAAAAACCCTTATCCATTGATATATATATTTCTTTTCCATCTTAAATTTCAAATCCCTTTCCAAATTAACTCCAAGATTTCAAATCTTAACCAATACAAAATCAATTAACCCTTCTAATTATCTCAATTTGAATTAAATCCAAATTTTCAAATCTTTACTAAATTAACACCCAAATAATTCAAGATAACTAAATTAAAATCTTTTGAAGATTCTGAAGGTTACATTTTTTGTATTTAATGAATTTTTCTACGATATAATGGAAATATCGATTCATCTCTTATATTGAAATCGAATCCATGAAAATAGAGAAATATGATAAAAATATCACACATCGATGGAAATTTAATACTATGATAAAAACCATTAATACAAGCACGTTTTCATTGTATTTAGTTATAAAATGTAAAATATTCATTAAAATTGTCAAAAGGTTACCTCTGATATTTTATTATTATTATTATTCTTGACTTATTTCATAATATGCAATTTGTCAAAAGGTTAGCTCTAATATTTTATTATTATTATTTATTATTCTTGACTTATTATATATATATACACGTTTATCGAAATCTTTATGAGTCTCGCTGACTTTATGATTATTTACAATTTTGACCTTAAAATTTAGATATTAGAGATATTTACGGGATTAAACCGAATTGACTGGTTTAAAATAAACGTGAATCATTGAAAATTGACTAAGCTCGGTTTCGATTTTTAATCAGAACCAGCCTGCTTCGATTCAAGCCCATTCGGTTTGATTAGCTAGTGCCTTTTATCTGTCCCAACTCAATTAGCATGATTGCTATCCCTCAGTATAAATCAATTGGACTCACCCAACGTAAATCTCTAATGTGTTGCACATGCCACAATGAACTTAAAATACTTATGTTGTTTTTTCAAAATATATATATAATAAATACCTTTGTGGCGGTCAATTTCGAACTCGAAGTGGAGGTCTAGAAGCGTGAACTGAGGTGGCCGGAATGCGCGCCATCGGTGGTGACTATGGTGGAGCCATGGAAGTCTGGTGAGGGTTTAAGGAGAACTGAGGTAGCCGGCGTCTTTGAGAGTTAAAGGTGAAATCATGAAAATTGAAGGGTGGGCGGCTAGTGTTTTATCTTAGAGATTTCTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATCATTATTTTCTAATTCACAAAATTGTTCTCTTTTAGAAAAATCCTCACTCCTATCACATAAATAAGCAAATAATAATAATAATAATAATAATAATAATAATAATAGAGAAATTAAAAAAAAACGGTAAAACTGAAAATATAAGAATTAACGAATTAACGTGAAAAACTCCCAATTCGGACGAAAACCACGGACTAGAAAAATTCACTAGGTGAAAAATTGGAATAATTCTCTCTCCCAATCCCAATTACAAGAGCACTCTCTTAATGCTTTTATACTACTCACACCCTTTTCTACTCTCAAATTAAAGAATACATAAAGGAAATTAAACTAGAGTTAACACACTAAGCTTAAAGTGTTTCTAACTAGAACGACTTGAAACTAGAGGCATGGACTCTTTTATAGGCTTAGAGTCCATCTCTATTCTTCAATTTAACCGAGGTGGGATAATTACACTTCTAATATTCTACCAAAGATCAAACACTCTCTTTGTCTTGTGGACGTAGCTAACACACTGTTAGTTAACTACGTAAATATGTATGTCGATTTTCTATTTTTTTACTTTTTTTGTTTTCTTTATTTGTCGGTTTCGTAAAACTTTACGATGGAATTCGATTGTTTTACACTTCAAAAGATTAGATCTTTCATTTTGAGGAACAAAATACTATAAGAAACAAAATTTGAAAATGTGTTTTTAACAGTAAAAGAATGATTTATTACTATATTTGGTTTTTTCTTTTTTTTTTTTAGTGATTTTATTTGAAGACTCTACTTTTTTACATTTCTTTTGAATGTCAGTTTGAAGGTGCTGCTAATGAGGATGGAAAAGAACCAAGTATTTGGGATACCTTTACCCACCAACACCCAGGTCTCCTTCTCCTAGCATGTTAATTTCTTGTAATTTATTTTCTTTTTGAAAATCTCTTGTAAATCATATATAATACTTTATTATTAGGAATTTGATTATTTTTTATACTTTTTATGTTAGGTTTCGTCCAAAAATTTGAGGAAGATATCCTTAAAGACTACATAGAAATTAAAAATTATTACTAAAAAAAACTACAAATTTAAAGTATTGTTGAAGAAGATCATAATAATTAATTATCCTTGATGGCCATTTATTCTATTTGTTATATACCATGGTTGATTTTTCTAAAAAAAAATATGCGGGATAGAGGAATCAAATTTCTAACATTATTATTACTACAATAAACGTGGATTTTCATGACATAAGAGTGTAACCAAATTGAGGAGGGAGAGAAAAAAAGGTGTCATAAATAAATAAAAAAAATGTGCATTTTTAGCAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGAAAAAAAAAAAAAAAAAAAAAAAAGAAATGGAGTTTTCATATTTTTGTTCATTTATGACCGTTTTTAATTGTCAACGATTTATGACATCTATTAAATGTCATTAATTAATTGAATTATGTTTTAAAAAAATAAAATAAGAACAAAACCCCTTTCTTTTCAAGAAACGCTTATTCAGTCCTTGGTCTTCACACATATGCACTATCAAGGCTAGAGGGACGATTTTAATATAGTAATTGATGGTTAAATGAAAAATTAAACTAGAAAAAACAAATAAGAGTGTATTTGGAATGTATTTTCAAGTGTTTAATTTAAAAAATAAGTCATTTTGGAAAAATTTGAAGTGTTTGACAACCATTTAAAATAGATTTTAAAGTGTATTTTAAATAATTTTTATCAAAAGAGTTTAAATAAAAATGAATTTTTTGAAAAACACTTTTTTTCTCCAGTCAATTCAAACGGGTCATAAGTGTCACGATTGAAAAATTTTGTGAGATTATTGAGTGTCATCTTAGTGAACTTTTATTAACTCCTTCTAACGAGTTTGAGTCATATTATTTATTGTTGAGATTGTTGAAAAAGGCATGTGATGTGCATTCATATGGATTTGGTTTTTGTAAAATCATGGACTAGAAAACATGATGTAGTAGTAGTATTATAAGAGTTAAATTTTAGAATTTTTCACTTCACTAAAGTACTATATTAAAATCATGGCAATACCTTGTTGTATATTTAATTTCTTTGTAAAAATTTTATATTAGTTTACTTGTATTTGTCCCTTTGGGAACGTTCAATAGTTTCCTTCTATTTAGTTTCTTTGTAAAAACGTTATCAACTTTATTCTTATATATGAAAGTTCTTATTTATGTTTGTACTAATTTTGTGTTAAAATAGAATTAGTTGATGATAAAAATCACATGTGTAATGACAAGGTTTAAAGAAATAACAAACTATCAAGACATGTATTTTATTGACCATATAAAAGTGTTATAAATATGAAATTTGTGACAATAAAAATGTGTCGTGATAGAACATATGTTAACATAAAACATTTGTCATGGTTCAAATATTCTTAACAATGAAGTGTCATGGTTCATAAACTCTTGATAAGAAAAAAATGTCATTATATATTCTTTTTTGATATTTTATTAAGTGTTGTCAATACCTATAACACTACATCAATTGGCCAATTTTAAGTAAATTGATGACAATGATAACATGTCATAATAAACTTGACAATGACAGTTTATCATTGTCAGAAATTGTTCATTCTTGACAATTATATTATTTATTGTCAATGAAAGTTCAATTATGAAATTTTCAAAAACTGTCATTGATGCTCATACTGTTGCAGGGGATACCATTACAGAAAATAACAGTCACGAATTTTAATGGTGATAGTTTTTAAATGTCATGGAATCATAGTTTTGTTGTAGTTTATACAAATTTTTTGTTAGTTGAGTTATGTTCATTTTGGCTTTACCATTGTCATATGTATTATTTTATCTTTGTTGATTTCTTTACGTAACTTTAAGTATGTGGGCAATTCTTCCTACTTCTTTTTATGTCATGCAACAATATTAAAAAAAAAAAAAAAAAGCTAAAATATCATTTTAGTCTCTATACTTTGAAGTTTGTTCAATTTTAGTCATTATACTTTCAATTGTCCAATTTTAGTCGTCGCTTTACTTTCAATAAAATAATTAAGTGTATAGCAACATTCTTAAAGAATTACAAATATTGCAAAATCTATCAGTGATAGACTTTATCGCTGATAGACTTCTATTAGTGTTAGATTTTACGGTTGATAGACTCTTAATAACGATATGATCTATCACCAATAAACTCCAAAACCTATATCTAAATTTTACTATATATGTAAATTCTTTTTTATTGGGTTATATTTGCTAATATTTTGGACCTAGTTGTTAGACTCGCAACCGTTCCTTTATGAAAACTTTTAAAACTTTATGTTCCTTTATGAAAACTTTTAAAACTTTAAGTATGAAGTTAAAAATAATTTTAGAGGAAAAGGTTTATATAGTTTGTATAAATAATGTCTAAATTCAAAAAAATAAACCAAACATTAAAAAATGAAAAAAAAAAAATACTTACTTCATTGTTTGTAAAATTGCAGAGAAAATTTATGATAACAGCAATGGAGATATAGCTATTGATCAATACCATCGCTATAAGGTACATAAATGAAATGAAAATGTTTAGGTTTTATTTTATTGTTTATTATTGAAGTTGTTAGAGATTTGATTTTGATGTTAGCTATATTTTGTTTAAGATAGTTGTTGTTGTAGCTTCTTTTGTTATCTGGATTGTGAATTGTCTCTCAAGGTGTTTCTGCATTTGATACCTCACACAGGATATGTTCCACAGTGCATTGTTGATTCTGCTGTTTATTTTTTTTTTTGTTGGGAAAATCATGTTTGCCTTATTTGCGATATTTTTCATTATTATGTGAAATATCGATTTTCCTTTTGAAAGATATTCTTTCCTTGTCTGCTACTTATATTTAAAGTTCCCAATCACTCTCGCTCGCTCTTGTCTCACCACCGATCGTCTTGCGAAGTACGTCGTCGAGTTGTGTCTCGTCGTCGCTCCGTCAGGCATTCCGCTAGTTCCTACCGATTGTGAGGTAGGTCTTACACACACTCTCTCTATCTCTCTCTCTCTCTCTCAAGAAGCTTCACATCGTCGCTGATCTGACGCCGATCACCACTCAAATGCTCGCAGCAATTGGGTCTCGCCGTTTTCCTCGCCGGCCGTTCACATGTAGCATATGTAGTTTCATCTCCACCCTTCTTTCTCTAAATCTCTACCTTTCTCTCATAGTTTCTCTCTCTAGGGATTTGTTGAATAATCCGCCATCGTTTTTACCACCTCGACACGTCGCTGGCTGCCCTTGTCATCGTTGGCCAGTCACTAGTTTCAGCTGTTGCCGAAGTTCGGTGGTGGGTGAGTTTTGTTGGGATTTTCTTCAAGTTATTAATCACCCATATGCATTGGTTTGAAATCGAGATTACCCACTGTGTTTTGGGATTTTAGGTTGGTGAATCAAAGTCTTTGATTGATGGCCATTGAGTTTCTGTTTTAGATTCAAGTTTTGGAGGAGTTTTGAAGTCAAAAGTGTGCTGGCCTGCAAGTTTTGGATCGATTTCGGCAAGATTAGCAAGTATTTGAGGTTTCATGGCCAGTTGTAGTGTTAAGGGTACTGTAAACTAAGTTTATAATTTTTGGTTGTGGTCTATGTTTAGGTTGGGCCACTGAGTTGAAGTTTCAAAGTGGTTTTGGATCAAGCCACGTGTTGGATAAGTAATGAGAGGTTTTGTTATAAGTTAAAAGTGTGTTTTGGAATGAGGCCCTAAAGTTTGAAGTTAAGTTTGTTGTGATTTGTGTGTTAGGAGCCTTGATCCAAGATTACTCTAAGTCAGGAAGAAGATTATTTGGTTGTTGATAGCGACAACCACAAGTGCACGGGTCAAGTTGTAATATAAAACGGTCAAGACCGAGTATCGTTCCACTGAGGACTATTGTACGGTTTAATTGCCTAGCTATTCTAGAATTGAATCAACTTTATTTAAAGAATCGAAATCGAGTTTGTGATTAAATTTTGAAAACAGGAAAAGAAAGTAAAGATAAGTGAAAATCAAGAGATACAAGTGTTCTAGGGTGTTGAGTTTCTTTAATCAATCCCTTATGTGATATCTAGATTTTCATGGAAAATTATACCTGAGTAAAGTGTCCAAGTGTAGAAACTATTATCTGGATATTTTCTCTCAAAAAATAACTTTTCTTATGCAACCTAATTGATTACTAATTTCTTGAAACCAAGTTAAGAAGCATAGTATTAGACATAGTTAATAACAATTTTCTCTATCAACCTAGTTATTTTCATGAAAGATTGATGGAGATTTAATGCTATAGATCCAATTAAACATACAACCACTCAATCATATATTTAACCAAACATTCATTGATGATCAATCAATAGAGAATGAAACACAATAACATTGAAAAACATATCATTCAAAATGCTAAATAATCAACATAAGTTCATAATTAAATTCATCAACATCCTAAAACTAAGAATTTAGTCACACATAGTCATCAAATACATAATTTTCAATGAATTCTTAAGCATAAGAGAAAAGTGAAAGAGAAACTTAGGAAGACAAGACTCTCAAATTGCTCCCAATTGATGAATTTCGTCAATTTCTACTCGGTCGGCACCTCATGGTCTCGAACAACCTCCAACCTTCTCTAACAAATTTTCTCTTAATTTGATAGCAATTTCACACTTTTAGGCTATGATATATTGTGATTAAGACTGCTGAACACCTCCTAATTTATAAAATTTTTCAAACTTGCAACCTAAAAACTTTCAAAAAATACAGAATTTTCAATTTAGGATAGCTAGTATTGTAGCGCTGTGGACTAGCACCGCGATGCCATGGGTCATAAAAAACTACCCCCAAGCGTCACGCTGCAATGCCGCCTCAGCACTGCGGCGCTCTCGACTTGTCTCAAACATGGTGCTCTCAGGTTTTAGTGTTGAGGCAGCACCACCTTAGTGCCGCGGCGCTGCCCTATTTTAGGGATTTTTCCTTTTTCTTCACTTTTTCATCCGGTTTTGGCTCAGTTTGGTTCTTTTGGCTTCCACAACTTGTTTCTTCATTATTACCTGAAAACCACTAGCAAACAACATCAAAACCAATAAAAGCATTCCTAAATTAAGAGTAAATAAATCACTTTTTAGGTGCTTTTAAGTTGTTATTTGGGCTTATATTCAAGGTAAGTGGTCTTACTACTAGAATTTTTAGGCTAGATTGGGAACTGTGCGTTGATAGGATAGTCTCTGTGTGAATTTTAGTCTGATTTGCATGACATGATAAATGTGTTATATGTATGATTGATGGATGTGGTGAATGTTATAGAACCATGAATTTTTCCTAATGCACAGACCATGATTTAAATTTAGAAGGGAAGGAACTATGAAGTCTTATATTTATACAAGGTTGCAGTAATTTATGTTGCATTTCATGAAAGCATGAAAATGAATATGGGATCTCATGCATTTGTATGTTTCATGAAAACTAAGAACGATGTTTATGGCAATTATCTCTTTGAGAAAATTGATGTACATCTAGAGGAACCCGAGATATTGTCGGCGAAACTCGACCCCATTAATTTGGAGCCAACATATAGTTAA

mRNA sequence

ATGCCTCCACACTCTATTGATGTATTAAAAAGAAGCAGCTTTCCTAAAGGTTTCATTTTTGGCTCAGCATCTTCTGCTTATCAGAAGCGTGAACTGAGGTGGCCGGAATGCGCGCCATCGGTGGTGACTATGGTGGAGCCATGGAAGTCTGGTGAGGGTTTAAGGAGAACTGAGACTCTACTTTTTTACATTTCTTTTGAATGTCAGTTTGAAGGTGCTGCTAATGAGGATGGAAAAGAACCAAAGAAAATTTATGATAACAGCAATGGAGATATAGCTATTGATCAATACCATCGCTATAAGTTCCCAATCACTCTCGCTCGCTCTTGTCTCACCACCGATCGTCTTGCGAAGTACGTCGTCGAGTTGTGTCTCGTCGTCGCTCCGTCAGGCATTCCGCTAGTTCCTACCGATTGTGAGAAGCTTCACATCGTCGCTGATCTGACGCCGATCACCACTCAAATGCTCGCAGCAATTGGGTCTCGCCGTTTTCCTCGCCGGCCGTTCACATGTAGCATATGTAGTTTCATCTCCACCCTTCTTTCTCTAAATCTCTACCTTTCTCTCATAGTTTCTCTCTCTAGGGATTTGTTGAATAATCCGCCATCGTTTTTACCACCTCGACACGTCGCTGGCTGCCCTTGTCATCGTTGGCCAGTCACTAGTTTCAGCTGTTGCCGAAGTTCGGTGGTGGTAATTTATGTTGCATTTCATGAAAGCATGAAAATGAATATGGGATCTCATGCATTTGTATGTTTCATGAAAACTAAGAACGATGTTTATGGCAATTATCTCTTTGAGAAAATTGATGTACATCTAGAGGAACCCGAGATATTGTCGGCGAAACTCGACCCCATTAATTTGGAGCCAACATATAGTTAA

Coding sequence (CDS)

ATGCCTCCACACTCTATTGATGTATTAAAAAGAAGCAGCTTTCCTAAAGGTTTCATTTTTGGCTCAGCATCTTCTGCTTATCAGAAGCGTGAACTGAGGTGGCCGGAATGCGCGCCATCGGTGGTGACTATGGTGGAGCCATGGAAGTCTGGTGAGGGTTTAAGGAGAACTGAGACTCTACTTTTTTACATTTCTTTTGAATGTCAGTTTGAAGGTGCTGCTAATGAGGATGGAAAAGAACCAAAGAAAATTTATGATAACAGCAATGGAGATATAGCTATTGATCAATACCATCGCTATAAGTTCCCAATCACTCTCGCTCGCTCTTGTCTCACCACCGATCGTCTTGCGAAGTACGTCGTCGAGTTGTGTCTCGTCGTCGCTCCGTCAGGCATTCCGCTAGTTCCTACCGATTGTGAGAAGCTTCACATCGTCGCTGATCTGACGCCGATCACCACTCAAATGCTCGCAGCAATTGGGTCTCGCCGTTTTCCTCGCCGGCCGTTCACATGTAGCATATGTAGTTTCATCTCCACCCTTCTTTCTCTAAATCTCTACCTTTCTCTCATAGTTTCTCTCTCTAGGGATTTGTTGAATAATCCGCCATCGTTTTTACCACCTCGACACGTCGCTGGCTGCCCTTGTCATCGTTGGCCAGTCACTAGTTTCAGCTGTTGCCGAAGTTCGGTGGTGGTAATTTATGTTGCATTTCATGAAAGCATGAAAATGAATATGGGATCTCATGCATTTGTATGTTTCATGAAAACTAAGAACGATGTTTATGGCAATTATCTCTTTGAGAAAATTGATGTACATCTAGAGGAACCCGAGATATTGTCGGCGAAACTCGACCCCATTAATTTGGAGCCAACATATAGTTAA

Protein sequence

MPPHSIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISFECQFEGAANEDGKEPKKIYDNSNGDIAIDQYHRYKFPITLARSCLTTDRLAKYVVELCLVVAPSGIPLVPTDCEKLHIVADLTPITTQMLAAIGSRRFPRRPFTCSICSFISTLLSLNLYLSLIVSLSRDLLNNPPSFLPPRHVAGCPCHRWPVTSFSCCRSSVVVIYVAFHESMKMNMGSHAFVCFMKTKNDVYGNYLFEKIDVHLEEPEILSAKLDPINLEPTYS
Homology
BLAST of Lsi06G004880 vs. ExPASy Swiss-Prot
Match: P26204 (Non-cyanogenic beta-glucosidase OS=Trifolium repens OX=3899 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.4e-07
Identity = 39/104 (37.50%), Postives = 43/104 (41.35%), Query Frame = 0

Query: 9   LKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISFEC 68
           L RSSFP+GFIFG+ SSAY                                         
Sbjct: 35  LSRSSFPRGFIFGAGSSAY----------------------------------------- 94

Query: 69  QFEGAANEDG-----------KEPKKIYDNSNGDIAIDQYHRYK 102
           QFEGA NE G           K P+KI D SN DI +DQYHRYK
Sbjct: 95  QFEGAVNEGGRGPSIWDTFTHKYPEKIRDGSNADITVDQYHRYK 97

BLAST of Lsi06G004880 vs. ExPASy Swiss-Prot
Match: Q9ZT64 (Coniferin beta-glucosidase OS=Pinus contorta OX=3339 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.5e-06
Identity = 37/111 (33.33%), Postives = 46/111 (41.44%), Query Frame = 0

Query: 9   LKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISFEC 68
           L R++FP  F+FG+ASSAY                                         
Sbjct: 25  LDRNNFPSDFMFGTASSAY----------------------------------------- 84

Query: 69  QFEGAANEDGKEPK----------KIYDNSNGDIAIDQYHRYKFPITLARS 110
           Q+EGA  EDGK P           +I D+SNGD+A+DQYHRY   I L  S
Sbjct: 85  QYEGAVREDGKGPSTWDALTHMPGRIKDSSNGDVAVDQYHRYMEDIELMAS 94

BLAST of Lsi06G004880 vs. ExPASy Swiss-Prot
Match: P26205 (Cyanogenic beta-glucosidase (Fragment) OS=Trifolium repens OX=3899 GN=LI PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 7.8e-06
Identity = 37/111 (33.33%), Postives = 47/111 (42.34%), Query Frame = 0

Query: 9   LKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISFEC 68
           L RS F  GF+FG+ASSA+                                         
Sbjct: 25  LNRSCFAPGFVFGTASSAF----------------------------------------- 84

Query: 69  QFEGAANEDG-----------KEPKKIYDNSNGDIAIDQYHRYKFPITLAR 109
           Q+EGAA EDG           K P+KI D +NGD+AID+YHRYK  I + +
Sbjct: 85  QYEGAAFEDGKGPSIWDTFTHKYPEKIKDRTNGDVAIDEYHRYKEDIGIMK 94

BLAST of Lsi06G004880 vs. ExPASy Swiss-Prot
Match: Q339X2 (Beta-glucosidase 34 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU34 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-05
Identity = 36/108 (33.33%), Postives = 44/108 (40.74%), Query Frame = 0

Query: 9   LKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISFEC 68
           L R SFP GF+FG+ASSAY                                         
Sbjct: 33  LTRKSFPNGFVFGTASSAY----------------------------------------- 92

Query: 69  QFEGAANEDGKEPK----------KIYDNSNGDIAIDQYHRYKFPITL 107
           Q+EGA  EDG+ P           KI D SN D+A+DQYHR++  I L
Sbjct: 93  QYEGAVKEDGRGPTIWDKFAHTFGKIIDFSNADVAVDQYHRFEEDIQL 99

BLAST of Lsi06G004880 vs. ExPASy Swiss-Prot
Match: Q67XN2 (Beta-glucosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGLU8 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.3e-05
Identity = 34/107 (31.78%), Postives = 44/107 (41.12%), Query Frame = 0

Query: 6   IDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYIS 65
           ID   R+ FP+ F+FG+ +SAY                                      
Sbjct: 20  IDAFTRNDFPEDFLFGAGTSAY-------------------------------------- 79

Query: 66  FECQFEGAANEDGKEP------KKIYDNSNGDIAIDQYHRYKFPITL 107
              Q+EGAANEDG+ P         Y+ SNGDIA D YH+YK  + L
Sbjct: 80  ---QWEGAANEDGRTPSVWDTTSHCYNGSNGDIACDGYHKYKEDVKL 85

BLAST of Lsi06G004880 vs. ExPASy TrEMBL
Match: A0A1S3BPA3 (cyanogenic beta-glucosidase-like OS=Cucumis melo OX=3656 GN=LOC103492051 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 7.6e-12
Identity = 51/117 (43.59%), Postives = 57/117 (48.72%), Query Frame = 0

Query: 3   PHSIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLF 62
           PH ID++KRSSF KGFIFGSASSAY                                   
Sbjct: 30  PHHIDLVKRSSFSKGFIFGSASSAY----------------------------------- 89

Query: 63  YISFECQFEGAANEDGK-----------EPKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                 QFEGAA EDGK            P+KIYD+SNGDIAIDQYHRYK  I + +
Sbjct: 90  ------QFEGAAQEDGKGPSIWDTYTHQHPEKIYDHSNGDIAIDQYHRYKEDIAILK 105

BLAST of Lsi06G004880 vs. ExPASy TrEMBL
Match: A0A5A7TFF1 (Cyanogenic beta-glucosidase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold768G00030 PE=3 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-11
Identity = 50/117 (42.74%), Postives = 56/117 (47.86%), Query Frame = 0

Query: 3   PHSIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLF 62
           PH ID++KRSSF K FIFGSASSAY                                   
Sbjct: 20  PHHIDIVKRSSFSKDFIFGSASSAY----------------------------------- 79

Query: 63  YISFECQFEGAANEDGK-----------EPKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                 QFEGAA EDGK            P+KIYD+SNGDIAIDQYHRYK  I + +
Sbjct: 80  ------QFEGAAQEDGKGPSIWDTYTHQHPEKIYDHSNGDIAIDQYHRYKEDIAILK 95

BLAST of Lsi06G004880 vs. ExPASy TrEMBL
Match: A0A5A7UK54 (Cyanogenic beta-glucosidase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1371G00200 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.3e-10
Identity = 47/119 (39.50%), Postives = 58/119 (48.74%), Query Frame = 0

Query: 2   PPH-SIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETL 61
           P H  ID+++RSSFPKGF+FGSASSAY                                 
Sbjct: 28  PSHIPIDLVRRSSFPKGFVFGSASSAY--------------------------------- 87

Query: 62  LFYISFECQFEGAANEDGKE-----------PKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                   QFEGAA EDGK+           P+KIYD+S GD+A+DQYHRYK  + L +
Sbjct: 88  --------QFEGAAFEDGKKPSIWDNYTHQHPEKIYDHSTGDVAVDQYHRYKEDVALMK 105

BLAST of Lsi06G004880 vs. ExPASy TrEMBL
Match: A0A1S3BP89 (cyanogenic beta-glucosidase-like OS=Cucumis melo OX=3656 GN=LOC103492052 PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 9.3e-10
Identity = 47/119 (39.50%), Postives = 58/119 (48.74%), Query Frame = 0

Query: 2   PPH-SIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETL 61
           P H  ID+++RSSFPKGF+FGSASSAY                                 
Sbjct: 28  PSHIPIDLVRRSSFPKGFVFGSASSAY--------------------------------- 87

Query: 62  LFYISFECQFEGAANEDGKE-----------PKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                   QFEGAA EDGK+           P+KIYD+S GD+A+DQYHRYK  + L +
Sbjct: 88  --------QFEGAAFEDGKKPSIWDNYTHQHPEKIYDHSTGDVAVDQYHRYKEDVALMK 105

BLAST of Lsi06G004880 vs. ExPASy TrEMBL
Match: A0A0A0LZZ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G611290 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 2.7e-09
Identity = 47/118 (39.83%), Postives = 54/118 (45.76%), Query Frame = 0

Query: 2   PPHSIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLL 61
           PPH I +LKRSSF K FIFGSASSAY                                  
Sbjct: 28  PPHHIGLLKRSSFSKDFIFGSASSAY---------------------------------- 87

Query: 62  FYISFECQFEGAANEDGK-----------EPKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                  QFEGAA EDGK            P++I D+SN D+AIDQYHRYK  + L +
Sbjct: 88  -------QFEGAAKEDGKGPSIWDNYTHQHPERISDHSNADVAIDQYHRYKEDVALLK 104

BLAST of Lsi06G004880 vs. NCBI nr
Match: XP_038879791.1 (cyanogenic beta-glucosidase-like [Benincasa hispida])

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-12
Identity = 51/117 (43.59%), Postives = 58/117 (49.57%), Query Frame = 0

Query: 3   PHSIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLF 62
           PHSIDV+KRS FPK FIFGSASSAY                                   
Sbjct: 28  PHSIDVVKRSFFPKDFIFGSASSAY----------------------------------- 87

Query: 63  YISFECQFEGAANEDGK-----------EPKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                 QFEGAANEDGK            P+KIYD+SNGD+AIDQYHRYK  + + +
Sbjct: 88  ------QFEGAANEDGKRPSIWDTFTHQHPEKIYDHSNGDVAIDQYHRYKEDVAILK 103

BLAST of Lsi06G004880 vs. NCBI nr
Match: XP_008450456.2 (PREDICTED: cyanogenic beta-glucosidase-like [Cucumis melo])

HSP 1 Score: 81.3 bits (199), Expect = 1.6e-11
Identity = 51/117 (43.59%), Postives = 57/117 (48.72%), Query Frame = 0

Query: 3   PHSIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLF 62
           PH ID++KRSSF KGFIFGSASSAY                                   
Sbjct: 30  PHHIDLVKRSSFSKGFIFGSASSAY----------------------------------- 89

Query: 63  YISFECQFEGAANEDGK-----------EPKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                 QFEGAA EDGK            P+KIYD+SNGDIAIDQYHRYK  I + +
Sbjct: 90  ------QFEGAAQEDGKGPSIWDTYTHQHPEKIYDHSNGDIAIDQYHRYKEDIAILK 105

BLAST of Lsi06G004880 vs. NCBI nr
Match: KAA0040135.1 (cyanogenic beta-glucosidase-like [Cucumis melo var. makuwa])

HSP 1 Score: 79.3 bits (194), Expect = 6.0e-11
Identity = 50/117 (42.74%), Postives = 56/117 (47.86%), Query Frame = 0

Query: 3   PHSIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLF 62
           PH ID++KRSSF K FIFGSASSAY                                   
Sbjct: 20  PHHIDIVKRSSFSKDFIFGSASSAY----------------------------------- 79

Query: 63  YISFECQFEGAANEDGK-----------EPKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                 QFEGAA EDGK            P+KIYD+SNGDIAIDQYHRYK  I + +
Sbjct: 80  ------QFEGAAQEDGKGPSIWDTYTHQHPEKIYDHSNGDIAIDQYHRYKEDIAILK 95

BLAST of Lsi06G004880 vs. NCBI nr
Match: XP_038879842.1 (cyanogenic beta-glucosidase-like [Benincasa hispida])

HSP 1 Score: 77.0 bits (188), Expect = 3.0e-10
Identity = 46/116 (39.66%), Postives = 57/116 (49.14%), Query Frame = 0

Query: 4   HSIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFY 63
           H IDV++RSSFPKGF+FGS+S+AY                                    
Sbjct: 30  HPIDVVRRSSFPKGFVFGSSSAAY------------------------------------ 89

Query: 64  ISFECQFEGAANEDGK-----------EPKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                QFEGAA EDGK            P+KIYD+SNGD+A+DQYHRYK  + L +
Sbjct: 90  -----QFEGAAFEDGKGPSIWDNFTHQHPEKIYDHSNGDVALDQYHRYKEDVALMK 104

BLAST of Lsi06G004880 vs. NCBI nr
Match: KAA0054095.1 (cyanogenic beta-glucosidase-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 1.9e-09
Identity = 47/119 (39.50%), Postives = 58/119 (48.74%), Query Frame = 0

Query: 2   PPH-SIDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETL 61
           P H  ID+++RSSFPKGF+FGSASSAY                                 
Sbjct: 28  PSHIPIDLVRRSSFPKGFVFGSASSAY--------------------------------- 87

Query: 62  LFYISFECQFEGAANEDGKE-----------PKKIYDNSNGDIAIDQYHRYKFPITLAR 109
                   QFEGAA EDGK+           P+KIYD+S GD+A+DQYHRYK  + L +
Sbjct: 88  --------QFEGAAFEDGKKPSIWDNYTHQHPEKIYDHSTGDVAVDQYHRYKEDVALMK 105

BLAST of Lsi06G004880 vs. TAIR 10
Match: AT3G62750.1 (beta glucosidase 8 )

HSP 1 Score: 52.0 bits (123), Expect = 9.5e-07
Identity = 34/107 (31.78%), Postives = 44/107 (41.12%), Query Frame = 0

Query: 6   IDVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYIS 65
           ID   R+ FP+ F+FG+ +SAY                                      
Sbjct: 20  IDAFTRNDFPEDFLFGAGTSAY-------------------------------------- 79

Query: 66  FECQFEGAANEDGKEP------KKIYDNSNGDIAIDQYHRYKFPITL 107
              Q+EGAANEDG+ P         Y+ SNGDIA D YH+YK  + L
Sbjct: 80  ---QWEGAANEDGRTPSVWDTTSHCYNGSNGDIACDGYHKYKEDVKL 85

BLAST of Lsi06G004880 vs. TAIR 10
Match: AT1G60090.1 (beta glucosidase 4 )

HSP 1 Score: 49.7 bits (117), Expect = 4.7e-06
Identity = 33/106 (31.13%), Postives = 43/106 (40.57%), Query Frame = 0

Query: 7   DVLKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISF 66
           DV  RS +P+GF+FG+ +SAY                                       
Sbjct: 22  DVFSRSDYPEGFVFGAGTSAY--------------------------------------- 81

Query: 67  ECQFEGAANEDGKEPK------KIYDNSNGDIAIDQYHRYKFPITL 107
             Q+EGAA EDG++P          D  NGDIA D YH+YK  + L
Sbjct: 82  --QWEGAAAEDGRKPSLWDTLCHSRDQGNGDIACDGYHKYKDDVKL 86

BLAST of Lsi06G004880 vs. TAIR 10
Match: AT5G44640.1 (beta glucosidase 13 )

HSP 1 Score: 49.7 bits (117), Expect = 4.7e-06
Identity = 37/109 (33.94%), Postives = 44/109 (40.37%), Query Frame = 0

Query: 9   LKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISFEC 68
           L+RS FPK FIFG+A+SAY                                         
Sbjct: 31  LRRSDFPKDFIFGAATSAY----------------------------------------- 90

Query: 69  QFEGAANEDG-----------KEPKKIYDNSNGDIAIDQYHRYKFPITL 107
           Q EGAA+EDG           K P+KI D +NG IA D YH YK  + L
Sbjct: 91  QVEGAAHEDGRGPSIWDTFSEKYPEKIKDGTNGSIASDSYHLYKEDVGL 98

BLAST of Lsi06G004880 vs. TAIR 10
Match: AT5G42260.1 (beta glucosidase 12 )

HSP 1 Score: 49.3 bits (116), Expect = 6.2e-06
Identity = 37/109 (33.94%), Postives = 44/109 (40.37%), Query Frame = 0

Query: 9   LKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISFEC 68
           L+RS FP+ FIFG+A+SAY                                         
Sbjct: 31  LRRSDFPEDFIFGAATSAY----------------------------------------- 90

Query: 69  QFEGAANEDG-----------KEPKKIYDNSNGDIAIDQYHRYKFPITL 107
           Q EGAA+EDG           K P+KI D SNG IA D YH YK  + L
Sbjct: 91  QVEGAAHEDGRGPSIWDTFSEKYPEKIKDGSNGSIASDSYHLYKEDVGL 98

BLAST of Lsi06G004880 vs. TAIR 10
Match: AT1G26560.1 (beta glucosidase 40 )

HSP 1 Score: 48.9 bits (115), Expect = 8.0e-06
Identity = 33/111 (29.73%), Postives = 45/111 (40.54%), Query Frame = 0

Query: 9   LKRSSFPKGFIFGSASSAYQKRELRWPECAPSVVTMVEPWKSGEGLRRTETLLFYISFEC 68
           + R SFPKGF+FG+ASSA+                                         
Sbjct: 32  ISRGSFPKGFVFGTASSAF----------------------------------------- 91

Query: 69  QFEGAANEDGKEPK----------KIYDNSNGDIAIDQYHRYKFPITLARS 110
           Q EGA   +G+ P           KI D SN D+A+DQYHRY+  + L ++
Sbjct: 92  QHEGAVKAEGRGPTIWDTFSHTFGKITDFSNADVAVDQYHRYEEDVQLMKN 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P262042.4e-0737.50Non-cyanogenic beta-glucosidase OS=Trifolium repens OX=3899 PE=1 SV=1[more]
Q9ZT643.5e-0633.33Coniferin beta-glucosidase OS=Pinus contorta OX=3339 PE=1 SV=1[more]
P262057.8e-0633.33Cyanogenic beta-glucosidase (Fragment) OS=Trifolium repens OX=3899 GN=LI PE=1 SV... [more]
Q339X21.0e-0533.33Beta-glucosidase 34 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU34 PE=2 SV=1[more]
Q67XN21.3e-0531.78Beta-glucosidase 8 OS=Arabidopsis thaliana OX=3702 GN=BGLU8 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A1S3BPA37.6e-1243.59cyanogenic beta-glucosidase-like OS=Cucumis melo OX=3656 GN=LOC103492051 PE=3 SV... [more]
A0A5A7TFF12.9e-1142.74Cyanogenic beta-glucosidase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5A7UK549.3e-1039.50Cyanogenic beta-glucosidase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S3BP899.3e-1039.50cyanogenic beta-glucosidase-like OS=Cucumis melo OX=3656 GN=LOC103492052 PE=3 SV... [more]
A0A0A0LZZ92.7e-0939.83Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G611290 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
XP_038879791.12.4e-1243.59cyanogenic beta-glucosidase-like [Benincasa hispida][more]
XP_008450456.21.6e-1143.59PREDICTED: cyanogenic beta-glucosidase-like [Cucumis melo][more]
KAA0040135.16.0e-1142.74cyanogenic beta-glucosidase-like [Cucumis melo var. makuwa][more]
XP_038879842.13.0e-1039.66cyanogenic beta-glucosidase-like [Benincasa hispida][more]
KAA0054095.11.9e-0939.50cyanogenic beta-glucosidase-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
AT3G62750.19.5e-0731.78beta glucosidase 8 [more]
AT1G60090.14.7e-0631.13beta glucosidase 4 [more]
AT5G44640.14.7e-0633.94beta glucosidase 13 [more]
AT5G42260.16.2e-0633.94beta glucosidase 12 [more]
AT1G26560.18.0e-0629.73beta glucosidase 40 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 4..112
e-value: 3.5E-13
score: 50.6
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 68..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G004880.1Lsi06G004880.1mRNA