Lsi06G004420 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G004420
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr06: 4824815 .. 4827115 (+)
RNA-Seq ExpressionLsi06G004420
SyntenyLsi06G004420
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTAGAGAGTTGAACCCAAGCAAACTCCTCTTTATACGCTATGCTTGACTCACAGGAAGCTTCACACGTATACACAACAATCGTCGCCCAGTCGAGTGAATCCACATCATTCTTTACCCCAAAATAGTAAAGCAACTGAGGCAAGATCTGTTGTAACCCAATGCAAAGTATCTATAACTTTCGAAACTAAAGAATCTAAATGTGAAACCAGAAAAAAGAAGGGTGTAGGACTTACCTGAAATTCGTAACACATGGGACTGTCGCAGTAACTGCATTTTGGGATATCTGCTTTGGAAGGCAAACCACTTGACATTGGCCATAAAGGTTTAGATCCCACATCTCTACAATATCTGTTTCCATTTTTTTTATTAATGAAATTAATAACATATTGGCATTGAGATGAATAACTTAGTCAAGTAAAAATGTAACTGCACATTTCGATCATCACCGAGTGTGGTAGCATCACTTGCAAATATACGAATAGGCTAAAATGTTTATATGATAATAAGATTTTGATTTTATTTAGTCTCCTGATTCAAATAGCATCTAAGGCCAGAGAAATTTTTACTTCATTCATAATTTACAAAATATCAAGCAAATGATCAACTTTTGTGATTTTTAGTTCCCTTTGGCCAGGGATCTTTGGACATGATAAAGTTCGATCAAGTTCAATCAAGTTGGTAAAACTTCAGTAGAAAACTTGAAACATTAATAATACCTCAATACTTGTTCAGGTGCCTTTGATAAGCGACCTTGAAAAGAGGCCCAAGACTTTCTATCATCATCTCCCTGTATACGAAAAATTTCATAAACTCTAGCAACAAAACAATTAAGCTTTTTGATGAAATATCACACTTTCGTATATAAATGAAAGATCCTTTCCCTGCACACAGTAAAATCCCAACAAAGTTCCAAGAACAGAGCCAAGCTCTGGATATAAATTTATTTATAAACCTCTTGGAAAGATTACAACGAAATGAAATAAGAAGAAATAGCAAGATGAACCAAGACACAAAACTAATCACCAGCACTTTCCAGAGGGCTGGGAATCCTCTCCCTCAAGCCAAAGCTTGTCTACTGATTTCCTATCCTCCCTGATCTCCTTCCTCCTGCCTAAAACCTCCTCCCACCCACTGGTCCCCACTTCTTTCCTACTCATCATGGTCCCCCCTCTCTCCCTAACGAACTTCCTCCCTCATCTATATTATTCTTCTCGTTTTTACCTCTTTTACCCTTTCTCTTATATGTGTACAGAATTGGAGGCCTTACAGACTACAAAAAAAAAATATAAAAAAGAAGCAAAACAGACAAAAGGAGCCTCTTATATGAAGAAACCCAACTCGATGTTACAAAAGGAAATTCAATTCTTCAAAATAGTTAAACAACTTCTAAGAAATAGAGATACAAAAAAAGACACTAAGGCCACTACCAAAGAAGATTAAAGTTCTCAAATGATATGATGCCATAAAGACCAATACCTCAAAATTGGCCAACAAGGACTTCATCGAGTCATCCATCCTATCCTTACTAACCAAAGCATTTGCATAAGAATTGTCATGAGATATTTCAATGTCGAACTCACTCTCATATTCATGCATGATCTCAAATTCAGGCCAAAGATGCTTGCTTGAAACTGTCGGAAAAGCAAATAATTCTCAGTTAAATTTTAAGAGCTACTTCCCATACATCTTAGTCAAGCAATTGATCCTAGAGCTTCTACCAGATTAAAATATTTTTCAAGGTTAGTGCTACTATATATAAATATAAACTATTGATATTGATAATCCTTCAAATATTCTACACAAAAAACAAATGAAGTCCAAGTCATGAATCTTGCAAAAGAAACTAGAAATCCAGGACAAGGACCAAATCCAAAAAATAAAATAAAAAAATATGAATCTTCCTATTATCTCATTAATACCCAGATAAGTTTTTTCTTCACCAACCTTTCTCAATATCTGTTTCGGAATGACTGTCAGTCAGTCTAGAACTTGACAACTGAGAAGACATGCACATCCGTTGGCAATCAGTTTTATGCCCAGTACGCCAATGAATAGCCTAAAGATATATAGAATAGAGTATTGAGGATCGGAATCAAGAAGTTAATTTGGTTTTGACGTGTTGAAAGTTCAAAATACAAGAAATTGTACTTGCAGGCTGGCAGCAGCGCTGCAAATATGTTACCTGATGTTTCTCAGAACAATAGCGTACTGTTCTACACTTACTACAAACTTTGTCTCCTTTCCAAGTACCACACCAGTTACAACGTGCAACTAAAACAACATCACATATGTTAA

mRNA sequence

ATGGGGAAGCTTCACACGTATACACAACAATCGTCGCCCAGTCGAGTGAATCCACATCATTCTTTACCCCAAAATAGTAAAGCAACTGAGGCAAGATCTGTTGTAACCCAATGCAAAGCTGGCAGCAGCGCTGCAAATATGTTACCTGATGTTTCTCAGAACAATAGCGTACTGTTCTACACTTACTACAAACTTTGTCTCCTTTCCAAGTACCACACCAGTTACAACGTGCAACTAAAACAACATCACATATGTTAA

Coding sequence (CDS)

ATGGGGAAGCTTCACACGTATACACAACAATCGTCGCCCAGTCGAGTGAATCCACATCATTCTTTACCCCAAAATAGTAAAGCAACTGAGGCAAGATCTGTTGTAACCCAATGCAAAGCTGGCAGCAGCGCTGCAAATATGTTACCTGATGTTTCTCAGAACAATAGCGTACTGTTCTACACTTACTACAAACTTTGTCTCCTTTCCAAGTACCACACCAGTTACAACGTGCAACTAAAACAACATCACATATGTTAA

Protein sequence

MGKLHTYTQQSSPSRVNPHHSLPQNSKATEARSVVTQCKAGSSAANMLPDVSQNNSVLFYTYYKLCLLSKYHTSYNVQLKQHHIC
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G004420.1Lsi06G004420.1mRNA