Lsi06G004150 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAATATATTTTTCTCTTTTACTTTCTTTCATTAGTTCTTTTGAGAGCAATTGGCCAAAAGAATGTCGTTTTAGTTGTAGAGCTTTGAGCTCAAACTCTCGGTGAGAGTGATTTGAGCTATACGACGTTTCAGTTGAGTTGTTGTATTTTGGAGGAACACGCCAGGTTGATATAAAAAAATTCAATACACGCCGCAGAGGGCTTGAATCTTTTTTAAGAGAGTGAGATATCTGCGTCTCAATTTAATTTTTTACGTATTTATATTTTAATATTTACTCTATTTTCTTATGTTATTTGTAATTTTCCTGTAAAAAATAAATGAACAAGAAAAATCCTTACCCATTTCGACCCTTTATACCCAGCTACCAAACCCCTCATAAATGTCAACAAAATTGAAAGTATACAAAGAATGTTAATTGATGATTTCATACATTAAATAAGTTATAGAGTTTCATCTTCAAATTTTGAAAAATAAATAATAAATTTTTTTATATTGGAGTCCCTATTAACACAATTCTCATTTCATTATATATATATATATTATATAGAAAGGGATGGAAGGATTAAACTTTTGTCATCTAGATTAGTGAAATAAGCTTATGTTATTTGAGCAATATTTATGTTGGACAATTAAATTATATTATAATTATGATGGTTTAAATATTTCAATGATATAATGACTGTGAATTGATATAAATTTAGACTTATAAATTAAAGGAAAATTTTACCGGATAGAAAAAATGTTAAACTATTTACAGAAAATAGCAAAAAAAAAATAGTGATAGACCCTGATAGATTTTTCTATCGGCGTCTATCACAACTATCTAAAAGTTTTACTATTTTGTGTAAGTAATTTTCCTTATTTTTATATTTTTAAAAATTTCCCTAAATTAAATTACTTATAAAATTTTTTCTTCGAATTTTCATAAAACTTTTTAGAATGTTGATTGAAAATTTAACTTTTTTTTTTAATATTTAAAAAGGGCTCCAAAGCATTTAATTGTTGTCTATTTAAAGGTTGTTATAAATTTTAGGGTAAATATCAATTTATACATCTAAATTAAACTCTGGGTTATATCAATTAGAATTCCAAACTAATTATGGTAACAATTTAAAATACGAACTTTCATAAGTGAATCAATGTAGACTATTTGTTAATGATTTGTAGCTCTTTTTACTTGATCAATTTAAAATCAACTCAATAAAACTATTCTTTATTAGAAATCCCAACGAAATAGCAAAAAATAATAATAATAATAATGTAATTCTTTTTAGATAAGTAGAGAAAAACAGAGGAAGACGAAAATGTTTTTCCAAGACAAAATAAAAAAACATATAATTATGTGTGTATATATATCACCAAAGTTTAAAGTGCTGATGGTGATAAAAATGTCGAGATTTTTACAAAATTGTAAATAGAAATATTGATGAAATGTCGAAGTTGATGAATATTTCTACAAAATTTATAAAAAAATCAAATAAAATATTTGAATTAATAAATACTTTTTATATTTTGTAAACAAATTAAAATGTTTATTATTTTTTATTAAGCTCACATTAACGACATTTTGTTGTTTGTCTCTAGGATAATTGCAGTGAGTAACACTTTTAAGGTTAATAATTAAGTACATGCAACATTTTTAAAGAATTGCAAATAAAGCAAAATCTATCAGTGATAAACTCTATCGTTGGTAGGCTCTTATTAGTGATAGACTTCTATAAGCGATATAATTTATCATGGATAGATATTGAAAGTTTGATATAAATTTTGCTATATCTGTAAGTTCTCTTGTATTGTGTCGTATCTACTAATACTTTAGACCTGATTGTTATATTTACAACTACCCACTTACTTTTATCACTTGGAGGTTAGATTTTTGAAAATGGAAGCTCAATGGAATATCTACGTGGAGGGTCGAATTTATATATTGTATTCCACGTGGAGGGTCGAACTTATATACCGTGTACACGAGTTTCACTAAAACCTAACTATCCTAAATTTATCAATAGTTTATATTTCAACCTTAAATCACAAATTTCATTTTTAACTACATTATTAATTTTTTTTCCACAACTACCCTATATTTGTCCTTTATTTTTTAAATTACATTATCGTAGAACTTTGCCCTTTATCAACCTTCAAATTTGATAAAAGCCTAAGTAGATATTTATACTTAAATTTATGACATTCTTATCCAGGCAAATACCAAAAACCCGGCACGTGTGAGGAGGCAATTTGGCGCGTTTACTTTCTCGGCGGCGTGCGAATCTGACACGTGCGAGGCATTCCAATTTTCACAACACTTGCGGTTTTTTCTATCCCCCTTTCGCCATTTTGGAGAAAGAATTTTTCTTCTTCTTCTTTACATCGACTTTTTCAAAACCCTCTGTCAGATTCCATTATCGTTCAGTTTTTTCTTCCTCCTCCGTCGACGACTATGGCCGAGCAACTCACCGACGATCAGATCTCCGAGTTCAAGGAAGCCTTCAGCCTCTTCGACAAGGACGGCGATGGTCTCGTTTCTCAGATCTCTTTTCTCTCTCTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAGATTATTCTTCATTTCATGTCTTTTCTCAGATCTGGCTGTCTGTTTTCTTGTTTTTCTGCTGTTTTGTGCTTGATCTAGGGTTTAGGTTTAATTTGAGGTTGTTTTTGTTTGCGTTGTTTTGGTTTCATGGAGTTTTATTTTATTTTAGTTTATTTTTTCAGCTGCTGATTTCGATGTTTTTGTGAGTTTTGTATGAGGATTTAGTGTTGTGGATTGGATCTGCTTTGATCTGTGCTTTCTTTTGGTTTGTTGACTTTATTTATTTTGTTTTCTTTTTGTTATGGTGTTCTGTTTGGACGGCGATCTTGTAACAAATTATTGGAAGGATATTTTTGTGAAATGATTCTGCATGGTTCATGGCTGATGATGTTTATGATTTCTTATTAGGTGTGCATGCACGAGTTTTTTCGTGGTAATTAAGATGTGTTTTTATGCTAATTGGATTTCTGGAATGAGAAAAAAGTGAATGTTTGCATTCTGATTCCTTGTTAACTATGACGAGTTGATTTATTGACGGTTGTGATTTTGCGACTTGTGTTGTTGGTGAAACTGTTGAAAGTTGTATGGATGGTCAAGGTTTGAGTGCACATTTATACCTGCACTTGGTGGGCTAGAAATGCCTAAGGTTTACTTTAAGAATGAATTTCAACTATTTGTTGAATAATGAAAATGTAAATGATACTTTTGATTCCATTTGCTTTCTACAGCCTTAGGAATTTCTGGCGAAGAGGAATGATGTTTTCCTGTATTATTGAGTTCTAAATTGTACGAATTTGTTATAATGATCTTGCTGATCTATAAGAAATCATTTTTTCTAGCAGATAGATGGTTTTTCCCTTTGTTTGGACTTTGACATATGTTTCATCCTTGCCAATCTCTTGAAAACCAAATTCTTATCTATAAATTAATAAACCATCTGGAATCGCTAACCCCTTTTCCTCTATGTCTTAGGGATTTTATTCTTCCCCTTCTCTTGGCTTTTCTTTTAGGACATTTTGATCTGTTCCCATGATTTATGATAATTTTACATTGGAATGCAGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGGTCACTTGGTCAAAATCCAACTGAAGCTGAGTTGCAGGACATGATCAATGAGGTGGATGCTGACGGAAATGGAACCATCGACTTCCCCGAGTTTCTGAATCTGATGGCTAGGAAGATGAAAGACACTGATTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTTGACAAGGACCAGAATGGTTTCATTTCTGCAGCTGAACTCCGCCATGTGATGACAAATCTTGGTGAGAAATTGACCGACGAAGAAGTCGATGAGATGATTCGTGAGGCTGACGTGGATGGTGATGGCCAGATTAACTACGAGGAATTCGTAAAAATCATGATGGCCAAGTGACAGACCGATCAAACGTGAAAGAGAACCTATCGACGCTAAGAACCGAAAGAGAGGTTAGCGCAAATATGTTCCATGACAACTATAATATCCTACTGGAGCCGTTCTATCTGTAGGAGATCCTTCTTTTTCGTGTTACTAGCTTTAGTTGGTTCTTTCTGTTATCTTACTCTCTTGTTTGCATAATTTATGGTACTGTATTCCGGTATTGCTTGCTGTTTCCTTTTCTTTTCTTTTCTTCTTCAGTAGATTAGATAGTGGATTCTTCTATTATCAATATTTGCTATTTTCCTTTTTGTGTTTGGCAATATCAATTCCAGGTACATTTCCAATGAATCCATTGCTTTTTGCTCCTGCACATGAGTCATGAATGTTGTTAATACTTGAATATTTATTGGCTGGGAATTTCTTTGATCATGTGACTTCCCTTGATGCTCAAGTATTTTGTAATTTATGATGCCTACATTATTATTATTATTATTATCGCTGCTTTTTAATATCCACAAGCGTCCGCCATCATGTGACCTCACAAAATAAGTAGTTATTATGATTTGTGTTTTCACAAAACGCGATAGTCAATACTTTGTTTACATTCGAGTGG CAATATATTTTTCTCTTTTACTTTCTTTCATTAGTTCTTTTGAGAGCAATTGGCCAAAAGAATGTCGTTTTAGTTGTAGAGCTTTGAGCTCAAACTCTCGGTGAGAGTGATTTGAGCTATACGACGTTTCAGTTGAGTTGTTGTATTTTGGAGGAACACGCCAGGTTGATATAAAAAAATTCAATACACGCCGCAGAGGGCTTGAATCTTTTTTAAGAGAGCAAATACCAAAAACCCGGCACGTGTGAGGAGGCAATTTGGCGCGTTTACTTTCTCGGCGGCGTGCGAATCTGACACGTGCGAGGCATTCCAATTTTCACAACACTTGCGATTCCATTATCGTTCAGTTTTTTCTTCCTCCTCCGTCGACGACTATGGCCGAGCAACTCACCGACGATCAGATCTCCGAGTTCAAGGAAGCCTTCAGCCTCTTCGACAAGGACGGCGATGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGGTCACTTGGTCAAAATCCAACTGAAGCTGAGTTGCAGGACATGATCAATGAGGTGGATGCTGACGGAAATGGAACCATCGACTTCCCCGAGTTTCTGAATCTGATGGCTAGGAAGATGAAAGACACTGATTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTTGACAAGGACCAGAATGGTTTCATTTCTGCAGCTGAACTCCGCCATGTGATGACAAATCTTGGTGAGAAATTGACCGACGAAGAAGTCGATGAGATGATTCGTGAGGCTGACGTGGATGGTGATGGCCAGATTAACTACGAGGAATTCGTAAAAATCATGATGGCCAAGTGACAGACCGATCAAACGTGAAAGAGAACCTATCGACGCTAAGAACCGAAAGAGAGGTTAGCGCAAATATGTTCCATGACAACTATAATATCCTACTGGAGCCGTTCTATCTGTAGGAGATCCTTCTTTTTCGTGTTACTAGCTTTAGTTGGTTCTTTCTGTTATCTTACTCTCTTGTTTGCATAATTTATGGTACTGTATTCCGGTATTGCTTGCTGTTTCCTTTTCTTTTCTTTTCTTCTTCAGTAGATTAGATAGTGGATTCTTCTATTATCAATATTTGCTATTTTCCTTTTTGTGTTTGGCAATATCAATTCCAGGTACATTTCCAATGAATCCATTGCTTTTTGCTCCTGCACATGAGTCATGAATGTTGTTAATACTTGAATATTTATTGGCTGGGAATTTCTTTGATCATGTGACTTCCCTTGATGCTCAAGTATTTTGTAATTTATGATGCCTACATTATTATTATTATTATTATCGCTGCTTTTTAATATCCACAAGCGTCCGCCATCATGTGACCTCACAAAATAAGTAGTTATTATGATTTGTGTTTTCACAAAACGCGATAGTCAATACTTTGTTTACATTCGAGTGG ATGGCCGAGCAACTCACCGACGATCAGATCTCCGAGTTCAAGGAAGCCTTCAGCCTCTTCGACAAGGACGGCGATGGCTGTATCACCACCAAGGAGCTTGGGACTGTGATGAGGTCACTTGGTCAAAATCCAACTGAAGCTGAGTTGCAGGACATGATCAATGAGGTGGATGCTGACGGAAATGGAACCATCGACTTCCCCGAGTTTCTGAATCTGATGGCTAGGAAGATGAAAGACACTGATTCAGAGGAGGAACTGAAGGAAGCCTTCCGTGTGTTTGACAAGGACCAGAATGGTTTCATTTCTGCAGCTGAACTCCGCCATGTGATGACAAATCTTGGTGAGAAATTGACCGACGAAGAAGTCGATGAGATGATTCGTGAGGCTGACGTGGATGGTGATGGCCAGATTAACTACGAGGAATTCGTAAAAATCATGATGGCCAAGTGA MAEQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKIMMAK Homology
BLAST of Lsi06G004150 vs. ExPASy Swiss-Prot
Match: P62200 (Calmodulin-1/11/16 OS=Daucus carota OX=4039 GN=CAM-1 PE=2 SV=2) HSP 1 Score: 293.1 bits (749), Expect = 1.8e-78 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy Swiss-Prot
Match: P62199 (Calmodulin-1 OS=Petunia hybrida OX=4102 GN=CAM81 PE=1 SV=2) HSP 1 Score: 293.1 bits (749), Expect = 1.8e-78 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy Swiss-Prot
Match: P59220 (Calmodulin-7 OS=Arabidopsis thaliana OX=3702 GN=CAM7 PE=1 SV=2) HSP 1 Score: 293.1 bits (749), Expect = 1.8e-78 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy Swiss-Prot
Match: P62202 (Calmodulin OS=Bryonia dioica OX=3652 PE=2 SV=2) HSP 1 Score: 293.1 bits (749), Expect = 1.8e-78 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy Swiss-Prot
Match: Q7Y052 (Calmodulin OS=Euphorbia characias OX=3991 PE=2 SV=4) HSP 1 Score: 293.1 bits (749), Expect = 1.8e-78 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy TrEMBL
Match: A0A6J1HTK6 (calmodulin-7-like OS=Cucurbita maxima OX=3661 GN=LOC111467700 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy TrEMBL
Match: A0A6J1H9Q6 (calmodulin-7-like OS=Cucurbita moschata OX=3662 GN=LOC111461412 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy TrEMBL
Match: A0A5A7UIG9 (Calmodulin-7-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G00740 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy TrEMBL
Match: A0A0A0M2G5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G600260 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. ExPASy TrEMBL
Match: A0A6J1D2Z3 (calmodulin-7-like OS=Momordica charantia OX=3673 GN=LOC111016526 PE=4 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 2.2e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. NCBI nr
Match: XP_004144099.1 (calmodulin-7 [Cucumis sativus] >XP_008451038.1 PREDICTED: calmodulin-7-like [Cucumis melo] >XP_020671844.1 calmodulin-7 [Dendrobium catenatum] >XP_022147657.1 calmodulin-7-like [Momordica charantia] >XP_022932793.1 calmodulin-7-like [Cucurbita moschata] >XP_022960693.1 calmodulin-7-like [Cucurbita moschata] >XP_022968467.1 calmodulin-7-like [Cucurbita maxima] >XP_022988230.1 calmodulin-7-like [Cucurbita maxima] >XP_023516116.1 calmodulin-7-like [Cucurbita pepo subsp. pepo] >XP_023531785.1 calmodulin-7-like [Cucurbita pepo subsp. pepo] >XP_038880302.1 calmodulin-7-like [Benincasa hispida] >KAA0055693.1 calmodulin-7-like [Cucumis melo var. makuwa] >KAG6588138.1 hypothetical protein SDJN03_16703, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022032.1 hypothetical protein SDJN02_15761 [Cucurbita argyrosperma subsp. argyrosperma] >KZV44436.1 calmodulin-7-like [Dorcoceras hygrometricum] >KAG6590265.1 hypothetical protein SDJN03_15688, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 294.7 bits (753), Expect = 4.6e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. NCBI nr
Match: XP_017248038.1 (PREDICTED: calmodulin-7-like [Daucus carota subsp. sativus] >XP_023731697.1 calmodulin-7 [Lactuca sativa] >KAF3631670.1 Calmodulin [Capsicum annuum] >KAF8007121.1 hypothetical protein BT93_K1198 [Corymbia citriodora subsp. variegata] >PHT59256.1 Calmodulin [Capsicum baccatum] >PHU29437.1 Calmodulin [Capsicum chinense] >RWW30139.1 hypothetical protein GW17_00005297 [Ensete ventricosum]) HSP 1 Score: 294.3 bits (752), Expect = 6.0e-76 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. NCBI nr
Match: XP_016577941.1 (PREDICTED: calmodulin-7-like [Capsicum annuum]) HSP 1 Score: 294.3 bits (752), Expect = 6.0e-76 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. NCBI nr
Match: KAG9157272.1 (hypothetical protein Leryth_004928 [Lithospermum erythrorhizon]) HSP 1 Score: 294.3 bits (752), Expect = 6.0e-76 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. NCBI nr
Match: XP_023763191.1 (calmodulin-7 isoform X1 [Lactuca sativa]) HSP 1 Score: 293.5 bits (750), Expect = 1.0e-75 Identity = 148/149 (99.33%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. TAIR 10
Match: AT3G43810.1 (calmodulin 7 ) HSP 1 Score: 293.1 bits (749), Expect = 1.2e-79 Identity = 147/149 (98.66%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. TAIR 10
Match: AT2G41110.1 (calmodulin 2 ) HSP 1 Score: 292.0 bits (746), Expect = 2.8e-79 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. TAIR 10
Match: AT2G27030.1 (calmodulin 5 ) HSP 1 Score: 292.0 bits (746), Expect = 2.8e-79 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. TAIR 10
Match: AT2G27030.3 (calmodulin 5 ) HSP 1 Score: 292.0 bits (746), Expect = 2.8e-79 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0
BLAST of Lsi06G004150 vs. TAIR 10
Match: AT3G56800.1 (calmodulin 3 ) HSP 1 Score: 292.0 bits (746), Expect = 2.8e-79 Identity = 146/149 (97.99%), Postives = 149/149 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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