Lsi06G003790 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G003790
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr06: 4185819 .. 4188987 (+)
RNA-Seq ExpressionLsi06G003790
SyntenyLsi06G003790
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCACGGGTTAGAATTTGTCTGACGTTAATTTAGGTATAAGTTATTTCAATTGCATGATAGTCTCCTAGCTGCTTGAAGGTTCATTTAATTTCATCTTGACCTCCTAAATATAGGATGCTCTTACTTTTAGCTCACCTTGATTGTATGATTATCTTGTTGAATGAGTTATTATCATCAGATAAGGTTCAAAGATCACTCTCATGCAATAAGACCTCAACACGAGCAACGAACCTTTTGATCAATACACTTTTCTATAAAGATTAAAGAGTAAACTCCTTCTCCAAATTGGTAATTTAAAACATTGTATTATATATATATATAGTTGACATCTATGATGTAATATCAAACTAAGTATATGATTGAACCAAACTTTATCTCAAACTATATAGATTGAAGTTCATTTTTCATTCATTTGGATATGTTACATATTTACACATATATTTTCTTTATAGCTATAATCGTTAGTACATTAGAGTAAGATAGAAAATGTCTTAGAGCATAAATACCCATAATAATTTTTTTTTTTTTGTTAAGTATGACCAACGAGTAAAAAGTTTCGAGATTTACACTTTTAACTTCAAAAATTTATTAAATATTCACTTTCAATATTTAGTGTTAATTTCTATTAATTAATTATAAAATTTATGATTAGTTAAGTTTCACTTTTTTCATCACTATTAAAATTGCTCTTAAAATTTCACTTTGTAATTATTTAATATTAATTAAGATACGTTAAAGCCAAAGATTGAAGTTTGTATTTGATAAAAAAATTGAAGATAAAAGTGTAAACTTTGAAACCTAAGGACTAAATTGAAATAAAACTCAAATCTTACTTTTGAAATATATGGATTAAATTGAAATCAAACTCAAAATTTAATGACTAACCATTTAATTTTTTATTTTTAGTTTTTGAAAATTAAGTTTATAAACACATTTTTCATCTTTAAATTTAGAGGAATTTTTAAAAATGAAAAAATAATGGAAACTAGTTATACAAAATAGCAAATTTTTTAGATAATTGTGATAGACGCTAATAAAAGTTTATCAGAATCTATCCGTGATAGACCTTTACATCAGTGATAGATGCAGATAAAAGTCTATCAATATCAATCAATATTTTTTTGCTATTTTCTGTAAATAGTTTGACATTTTTTTATATGTGAAATTTTTTCTTAAATTTATTGATTTGTTATTATTTTTTTATTAATATTTTTAAAAATCAATTGAAGTTTTTTATTTTAAAAAAATAGTTTTAAAAAGAGAAATTAGTATAGATAGAAAAAATATTGAATATTTACAAATATATAATTATTTTACTGTCTATGGCGATGATAAATAGTAAAATATTTTTATATTTGTAAATAGTTTTACACATTTTTTATATTAAAAAAAATATATATATTTTTTTTTTGTTGTTAAAAATTGACTAAGAACTCAACGGAAAAAAAAAATTGTCAAAACAGAGAGAGCATTTTTGTTAAACATAGCAATGGAGTTCACTCTCCAATGGAGGCTTTGAAATGCGTTGGACCCTCTCCCTCCTCTGCAAATCGTCTCCTTCCTTCCTCAAACCCGCCATTTTCACAGCCCCTCTCGCATTCACTTCCCTTCTTAGCAACTGCCGCCACCCTCTTCACCTTTATCAAATCCATGGCTTCATGTTGCACAGAGCTCTCGATCAGGACAATCTCTTTCTCAGCCGATTCATCGACGCTTGTTCCTCTCTTGGCCTCTCTTCATACGCATTTTCCGTCTTCTCAAACAAAACCCACCCCGACCTTCGTCTCTACAACACCGCCATTAAAGCCCTTTCTCAGACCTCCTCTCCCGTTAACGCCATTTCGCTTTACACCAGGATTCGGATTGAGGGATTGCGCCCTGATTCCTACTCTATTCCATTTGTTTTGAAGGCCGTTGTTCAGTTATCAGCCGTTGCAGTTGGGCGGCAGATTCATACCCAGACGGTTTCTTCAGCTTTGGATATGGATGTGAATGTTGTCACTTCTTTGATTCAAATGTATTCTTCTTGTGGGTTTGTTTCTGATGCTCGTAAGCTGTTTGATTTTGTTGGTTTTAAGGATGTGGCTTTGTGGAATGCTATGGTTGCTGGGTATGTTAAAGTTGCAGAACTTAAGAGTGCACGTAAGGTGTTCGATGAAATGCCTCAAAGGAATGTGATATCTTGGACTGCTTTGATTGCTGGGTATGCACAGACCAATAGGCCCGATGAAGCGATTGAGCTGTTCAGGAAGATGCAGCTTGAGGAAGTGGAGCCTGATGAAATTGCAATGTTGGCTGTGCTCTCTGCTTGTGCTGATCTGGGGGCTCTTGAACTTGGGGAGTGGATCCATAACTATATTGAAAAGCATGGTTTGTGTAGGATTGTTCCATTGTACAATGCCCTTATAGATATGTATGCAAAATCAGGCAACATAAGAAGAGCATTGGAAGTTTTTGAGAACATGAAGCAGAAAAGTGTCATAACTTGGTCCACCATGATTGCTGCCTTGGCTCTTCACGGGCTTGGAGGAGAAGCCATTGACATGTTCCATAGAATGGAGAAGGCAAAAGTTAGGGCAAATGAAGTAACTTTCATAGCAATTCTATCTGCTTGCAGCCATGTTGGGATGGTGGATGTGGGTCGTTATTATTTTGATCGAATGCAGTCAATGTACAAAATCGAGCCAAAAATTGAGCACTATGGCTGCATGATTGATCTTCTGGCTCGTGCTGGTTATCTTCAAGAGGCACAGAAACTGCTTCACGACATGCCATTTGAAGCAAATGCCGCGATATGGGGGTCTCTTCTTGCTGCTTCCAATATACATAGGGATGCTGGGCTTGCAGAGCAGGCTTTGAGGCATCTTGCTGAGCTGGAGCCTGAAAATAGTGGGAATTATACACTTTTATCCAATACATATGCTGCTCTTGGTAGGTGGAATGAATCTGGGATGGTGAGGAAGGTGATGAGAAATGCAGGTGTAAAAAAGGCTCCAGGTGGAAGTTTTATTGAAATCAATAACAGAGTGTATGAATTCCTGGCTGGAGATAAGTCAGATTCCCAGTTACATGGGATGTATCAAGTATTATGCAAGCTAATTCTGCAGTTGAAAATGGCCGGGTCGTATCAGGAGGAATGGAGTAAGTTTCTTGACTACGATGAATGA

mRNA sequence

ATGCACGGAGTAAACTCCTTCTCCAAATTGCAATGGAGTTCACTCTCCAATGGAGGCTTTGAAATGCGTTGGACCCTCTCCCTCCTCTGCAAATCGTCTCCTTCCTTCCTCAAACCCGCCATTTTCACAGCCCCTCTCGCATTCACTTCCCTTCTTAGCAACTGCCGCCACCCTCTTCACCTTTATCAAATCCATGGCTTCATGTTGCACAGAGCTCTCGATCAGGACAATCTCTTTCTCAGCCGATTCATCGACGCTTGTTCCTCTCTTGGCCTCTCTTCATACGCATTTTCCGTCTTCTCAAACAAAACCCACCCCGACCTTCGTCTCTACAACACCGCCATTAAAGCCCTTTCTCAGACCTCCTCTCCCGTTAACGCCATTTCGCTTTACACCAGGATTCGGATTGAGGGATTGCGCCCTGATTCCTACTCTATTCCATTTGTTTTGAAGGCCGTTGTTCAGTTATCAGCCGTTGCAGTTGGGCGGCAGATTCATACCCAGACGGTTTCTTCAGCTTTGGATATGGATGTGAATGTTGTCACTTCTTTGATTCAAATGTATTCTTCTTGTGGGTTTGTTTCTGATGCTCGTAAGCTGTTTGATTTTGTTGGTTTTAAGGATGTGGCTTTGTGGAATGCTATGGTTGCTGGGTATGTTAAAGTTGCAGAACTTAAGAGTGCACGTAAGGTGTTCGATGAAATGCCTCAAAGGAATGTGATATCTTGGACTGCTTTGATTGCTGGGTATGCACAGACCAATAGGCCCGATGAAGCGATTGAGCTGTTCAGGAAGATGCAGCTTGAGGAAGTGGAGCCTGATGAAATTGCAATGTTGGCTGTGCTCTCTGCTTGTGCTGATCTGGGGGCTCTTGAACTTGGGGAGTGGATCCATAACTATATTGAAAAGCATGGTTTGTGTAGGATTGTTCCATTGTACAATGCCCTTATAGATATGTATGCAAAATCAGGCAACATAAGAAGAGCATTGGAAGTTTTTGAGAACATGAAGCAGAAAAGTGTCATAACTTGGTCCACCATGATTGCTGCCTTGGCTCTTCACGGGCTTGGAGGAGAAGCCATTGACATGTTCCATAGAATGGAGAAGGCAAAAGTTAGGGCAAATGAAGTAACTTTCATAGCAATTCTATCTGCTTGCAGCCATGTTGGGATGGTGGATGTGGGTCGTTATTATTTTGATCGAATGCAGTCAATGTACAAAATCGAGCCAAAAATTGAGCACTATGGCTGCATGATTGATCTTCTGGCTCGTGCTGGTTATCTTCAAGAGGCACAGAAACTGCTTCACGACATGCCATTTGAAGCAAATGCCGCGATATGGGGGTCTCTTCTTGCTGCTTCCAATATACATAGGGATGCTGGGCTTGCAGAGCAGGCTTTGAGGCATCTTGCTGAGCTGGAGCCTGAAAATAGTGGGAATTATACACTTTTATCCAATACATATGCTGCTCTTGGTAGGTGGAATGAATCTGGGATGGTGAGGAAGGTGATGAGAAATGCAGGTGTAAAAAAGGCTCCAGGTGGAAGTTTTATTGAAATCAATAACAGAGTGTATGAATTCCTGGCTGGAGATAAGTCAGATTCCCAGTTACATGGGATGTATCAAGTATTATGCAAGCTAATTCTGCAGTTGAAAATGGCCGGGTCGTATCAGGAGGAATGGAGTAAGTTTCTTGACTACGATGAATGA

Coding sequence (CDS)

ATGCACGGAGTAAACTCCTTCTCCAAATTGCAATGGAGTTCACTCTCCAATGGAGGCTTTGAAATGCGTTGGACCCTCTCCCTCCTCTGCAAATCGTCTCCTTCCTTCCTCAAACCCGCCATTTTCACAGCCCCTCTCGCATTCACTTCCCTTCTTAGCAACTGCCGCCACCCTCTTCACCTTTATCAAATCCATGGCTTCATGTTGCACAGAGCTCTCGATCAGGACAATCTCTTTCTCAGCCGATTCATCGACGCTTGTTCCTCTCTTGGCCTCTCTTCATACGCATTTTCCGTCTTCTCAAACAAAACCCACCCCGACCTTCGTCTCTACAACACCGCCATTAAAGCCCTTTCTCAGACCTCCTCTCCCGTTAACGCCATTTCGCTTTACACCAGGATTCGGATTGAGGGATTGCGCCCTGATTCCTACTCTATTCCATTTGTTTTGAAGGCCGTTGTTCAGTTATCAGCCGTTGCAGTTGGGCGGCAGATTCATACCCAGACGGTTTCTTCAGCTTTGGATATGGATGTGAATGTTGTCACTTCTTTGATTCAAATGTATTCTTCTTGTGGGTTTGTTTCTGATGCTCGTAAGCTGTTTGATTTTGTTGGTTTTAAGGATGTGGCTTTGTGGAATGCTATGGTTGCTGGGTATGTTAAAGTTGCAGAACTTAAGAGTGCACGTAAGGTGTTCGATGAAATGCCTCAAAGGAATGTGATATCTTGGACTGCTTTGATTGCTGGGTATGCACAGACCAATAGGCCCGATGAAGCGATTGAGCTGTTCAGGAAGATGCAGCTTGAGGAAGTGGAGCCTGATGAAATTGCAATGTTGGCTGTGCTCTCTGCTTGTGCTGATCTGGGGGCTCTTGAACTTGGGGAGTGGATCCATAACTATATTGAAAAGCATGGTTTGTGTAGGATTGTTCCATTGTACAATGCCCTTATAGATATGTATGCAAAATCAGGCAACATAAGAAGAGCATTGGAAGTTTTTGAGAACATGAAGCAGAAAAGTGTCATAACTTGGTCCACCATGATTGCTGCCTTGGCTCTTCACGGGCTTGGAGGAGAAGCCATTGACATGTTCCATAGAATGGAGAAGGCAAAAGTTAGGGCAAATGAAGTAACTTTCATAGCAATTCTATCTGCTTGCAGCCATGTTGGGATGGTGGATGTGGGTCGTTATTATTTTGATCGAATGCAGTCAATGTACAAAATCGAGCCAAAAATTGAGCACTATGGCTGCATGATTGATCTTCTGGCTCGTGCTGGTTATCTTCAAGAGGCACAGAAACTGCTTCACGACATGCCATTTGAAGCAAATGCCGCGATATGGGGGTCTCTTCTTGCTGCTTCCAATATACATAGGGATGCTGGGCTTGCAGAGCAGGCTTTGAGGCATCTTGCTGAGCTGGAGCCTGAAAATAGTGGGAATTATACACTTTTATCCAATACATATGCTGCTCTTGGTAGGTGGAATGAATCTGGGATGGTGAGGAAGGTGATGAGAAATGCAGGTGTAAAAAAGGCTCCAGGTGGAAGTTTTATTGAAATCAATAACAGAGTGTATGAATTCCTGGCTGGAGATAAGTCAGATTCCCAGTTACATGGGATGTATCAAGTATTATGCAAGCTAATTCTGCAGTTGAAAATGGCCGGGTCGTATCAGGAGGAATGGAGTAAGTTTCTTGACTACGATGAATGA

Protein sequence

MHGVNSFSKLQWSSLSNGGFEMRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEWSKFLDYDE
Homology
BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match: Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 3.3e-149
Identity = 273/509 (53.63%), Postives = 372/509 (73.08%), Query Frame = 0

Query: 49  TSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDL 108
           TSL  +  +   L Q H +M+   L++DNL +++FI+ACS+ G   YA+SVF+++  P+ 
Sbjct: 19  TSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNT 78

Query: 109 RLYNTAIKALSQTSSP---VNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQI 168
            L+NT I+ALS    P     AI++Y ++     +PD+++ PFVLK  V++S V  GRQI
Sbjct: 79  YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138

Query: 169 HTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAEL 228
           H Q V    D  V+VVT LIQMY SCG + DARK+FD +  KDV +WNA++AGY KV E+
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198

Query: 229 KSARKVFDEMP--QRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLS 288
             AR + + MP   RN +SWT +I+GYA++ R  EAIE+F++M +E VEPDE+ +LAVLS
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258

Query: 289 ACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVIT 348
           ACADLG+LELGE I +Y++  G+ R V L NA+IDMYAKSGNI +AL+VFE + +++V+T
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318

Query: 349 WSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQ 408
           W+T+IA LA HG G EA+ MF+RM KA VR N+VTFIAILSACSHVG VD+G+  F+ M+
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378

Query: 409 SMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLA 468
           S Y I P IEHYGCMIDLL RAG L+EA +++  MPF+ANAAIWGSLLAASN+H D  L 
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438

Query: 469 EQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNR 528
           E+AL  L +LEP NSGNY LL+N Y+ LGRW+ES M+R +M+  GVKK  G S IE+ NR
Sbjct: 439 ERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498

Query: 529 VYEFLAGDKSDSQLHGMYQVLCKLILQLK 553
           VY+F++GD +  Q+  ++++L ++ LQ++
Sbjct: 499 VYKFISGDLTHPQVERIHEILQEMDLQIQ 527

BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match: Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)

HSP 1 Score: 400.6 bits (1028), Expect = 3.0e-110
Identity = 196/472 (41.53%), Postives = 305/472 (64.62%), Query Frame = 0

Query: 63  QIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTS 122
           +I+  ++   L Q +  +++ +D C  +    YA  +F+  ++P++ LYN+ I+A +  S
Sbjct: 28  KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87

Query: 123 SPVNAISLYTRIRIEGLR-PDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVV 182
              + I +Y ++  +    PD ++ PF+ K+   L +  +G+Q+H           V   
Sbjct: 88  LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147

Query: 183 TSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVI 242
            +LI MY     + DA K+FD +  +DV  WN++++GY ++ ++K A+ +F  M  + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207

Query: 243 SWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYI 302
           SWTA+I+GY       EA++ FR+MQL  +EPDEI++++VL +CA LG+LELG+WIH Y 
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267

Query: 303 EKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAI 362
           E+ G  +   + NALI+MY+K G I +A+++F  M+ K VI+WSTMI+  A HG    AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327

Query: 363 DMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDL 422
           + F+ M++AKV+ N +TF+ +LSACSHVGM   G  YFD M+  Y+IEPKIEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387

Query: 423 LARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNY 482
           LARAG L+ A ++   MP + ++ IWGSLL++     +  +A  A+ HL ELEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447

Query: 483 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKS 534
            LL+N YA LG+W +   +RK++RN  +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499

BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match: O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 3.8e-105
Identity = 191/507 (37.67%), Postives = 311/507 (61.34%), Query Frame = 0

Query: 64  IHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSS 123
           +HG  +  A+  D    +  I    S G    A  VF+     D+  +N+ I    Q  S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212

Query: 124 PVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTS 183
           P  A+ L+ ++  E ++    ++  VL A  ++  +  GRQ+ +    + +++++ +  +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272

Query: 184 LIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISW 243
           ++ MY+ CG + DA++LFD +  KD   W  M+ GY    + ++AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332

Query: 244 TALIAGYAQTNRPDEAIELFRKMQLEE-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 303
            ALI+ Y Q  +P+EA+ +F ++QL++ ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392

Query: 304 KHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAID 363
           KHG+     + +ALI MY+K G++ ++ EVF +++++ V  WS MI  LA+HG G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452

Query: 364 MFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLL 423
           MF++M++A V+ N VTF  +  ACSH G+VD     F +M+S Y I P+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512

Query: 424 ARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYT 483
            R+GYL++A K +  MP   + ++WG+LL A  IH +  LAE A   L ELEP N G + 
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572

Query: 484 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQ 543
           LLSN YA LG+W     +RK MR  G+KK PG S IEI+  ++EFL+GD +      +Y 
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632

Query: 544 VLCKLILQLKMAGSYQEEWSKFLDYDE 570
            L +++ +LK  G Y+ E S+ L   E
Sbjct: 633 KLHEVMEKLKSNG-YEPEISQVLQIIE 658

BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 3.0e-102
Identity = 197/491 (40.12%), Postives = 286/491 (58.25%), Query Frame = 0

Query: 50  SLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSS---YAFSVFSNKTHP 109
           S L  C     L QIH  ML   L QD+  +++F+  C S   S    YA  VF     P
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78

Query: 110 DLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIH 169
           D  L+N  I+  S +  P  ++ LY R+       ++Y+ P +LKA   LSA     QIH
Sbjct: 79  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138

Query: 170 TQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELK 229
            Q      + DV  V SLI  Y+  G    A  LFD +   D   WN+++ GYVK  ++ 
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198

Query: 230 SARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACA 289
            A  +F +M ++N ISWT +I+GY Q +   EA++LF +MQ  +VEPD +++   LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258

Query: 290 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWST 349
            LGALE G+WIH+Y+ K  +     L   LIDMYAK G +  ALEVF+N+K+KSV  W+ 
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318

Query: 350 MIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMY 409
           +I+  A HG G EAI  F  M+K  ++ N +TF A+L+ACS+ G+V+ G+  F  M+  Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378

Query: 410 KIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQA 469
            ++P IEHYGC++DLL RAG L EA++ + +MP + NA IWG+LL A  IH++  L E+ 
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438

Query: 470 LRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYE 529
              L  ++P + G Y   +N +A   +W+++   R++M+  GV K PG S I +    +E
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498

Query: 530 FLAGDKSDSQL 538
           FLAGD+S  ++
Sbjct: 499 FLAGDRSHPEI 509

BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match: Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 3.9e-102
Identity = 203/555 (36.58%), Postives = 319/555 (57.48%), Query Frame = 0

Query: 50  SLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSS---YAFSVFSNKTHP 109
           SLL++C++   L QIHG  +   +D D+ F  + I  C ++ +S    YA  +      P
Sbjct: 10  SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHC-AISISDALPYARRLLLCFPEP 69

Query: 110 DLRLYNTAIKALSQTSSPVNAISLYTRIRIEG-LRPDSYSIPFVLKAVVQLSAVAVGRQI 169
           D  ++NT ++  S++  P N+++++  +  +G + PDS+S  FV+KAV    ++  G Q+
Sbjct: 70  DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 129

Query: 170 HTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF----------------------DF 229
           H Q +   L+  + V T+LI MY  CG V  ARK+F                      D 
Sbjct: 130 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 189

Query: 230 VGFKDV---------ALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTN 289
            G +++           WN M+AGY+K  EL+SA+++F EMP R+ +SW+ +I G A   
Sbjct: 190 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 249

Query: 290 RPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYN 349
             +E+   FR++Q   + P+E+++  VLSAC+  G+ E G+ +H ++EK G   IV + N
Sbjct: 250 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 309

Query: 350 ALIDMYAKSGNIRRALEVFENMKQK-SVITWSTMIAALALHGLGGEAIDMFHRMEKAKVR 409
           ALIDMY++ GN+  A  VFE M++K  +++W++MIA LA+HG G EA+ +F+ M    V 
Sbjct: 310 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 369

Query: 410 ANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQK 469
            + ++FI++L ACSH G+++ G  YF  M+ +Y IEP+IEHYGCM+DL  R+G LQ+A  
Sbjct: 370 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 429

Query: 470 LLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGR 529
            +  MP    A +W +LL A + H +  LAEQ  + L EL+P NSG+  LLSN YA  G+
Sbjct: 430 FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGK 489

Query: 530 WNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKM 569
           W +   +RK M    +KK    S +E+   +Y+F AG+K        ++ L ++IL+LK 
Sbjct: 490 WKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKD 549

BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match: A0A5D3CFJ6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001140 PE=4 SV=1)

HSP 1 Score: 981.5 bits (2536), Expect = 1.5e-282
Identity = 488/548 (89.05%), Postives = 517/548 (94.34%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1   MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           +FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP+NAI LYTRI+I+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPINAIWLYTRIQIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DFV FKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVDFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEIYHVLCKIILQLKMAGSYQEEW 540

Query: 562 SKFLDYDE 570
           SKFL+YDE
Sbjct: 541 SKFLNYDE 548

BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match: A0A5A7UQ55 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001200 PE=4 SV=1)

HSP 1 Score: 980.3 bits (2533), Expect = 3.4e-282
Identity = 487/548 (88.87%), Postives = 517/548 (94.34%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1   MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           +FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP++AI LYTRI+I+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DFVGFKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540

Query: 562 SKFLDYDE 570
            KFL+YDE
Sbjct: 541 CKFLNYDE 548

BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match: A0A1S3BR86 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucumis melo OX=3656 GN=LOC103492408 PE=4 SV=1)

HSP 1 Score: 980.3 bits (2533), Expect = 3.4e-282
Identity = 487/548 (88.87%), Postives = 517/548 (94.34%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1   MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           +FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP++AI LYTRI+I+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DFVGFKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540

Query: 562 SKFLDYDE 570
            KFL+YDE
Sbjct: 541 CKFLNYDE 548

BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match: A0A0A0LX33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598880 PE=4 SV=1)

HSP 1 Score: 973.4 bits (2515), Expect = 4.1e-280
Identity = 490/541 (90.57%), Postives = 511/541 (94.45%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           M W+ SLL KSS SF KPAIFT+ L FTSLLSNCRH LHLYQIHGFMLHRALDQDNLFLS
Sbjct: 1   MCWSFSLLSKSSSSFFKPAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           +FIDAC+SLGLSSYAFS+FSNKTHPDLRLYNTAIKALS+TSSP+NAI LYTRIRI+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIP VLKAVV+LSAV VGRQIHTQTVSSALDMDVNV TSLIQMYSSCGFVSDARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DFVGFKDVALWNAMVAGYVKV ELKSARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIV LYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWST+IAALALHGLGGEAIDMF RMEKAKVR NEVTF+A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYFD+MQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANA IWGSLLAASN HRDA LA+ AL+HLA+LEP NSGNY LLSNTYAALG+WNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           K+MRNAGVKKAPGGS IEINN VYEFLAGD SDSQ+H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEW 540

Query: 562 S 563
           S
Sbjct: 541 S 541

BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match: A0A6J1JID8 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=3661 GN=LOC111484870 PE=4 SV=1)

HSP 1 Score: 973.0 bits (2514), Expect = 5.4e-280
Identity = 489/548 (89.23%), Postives = 513/548 (93.61%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           MRW+LS LCKSS SF++  IFTAP A TSLLSNCR   H+YQIHGFMLHRALDQDNL LS
Sbjct: 1   MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           RFIDACSSLGL  YAFSVFSNKTHPDLRLYNTA+KALSQTSSP+NAISLY+RI IEGLRP
Sbjct: 61  RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSY+IPFVLKAVVQLS V VGRQIHTQTVSS LD DVNVVTSLIQMYSSCG VSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           D V +KDVALWNAMVAGYVKVAEL SARKVFD+MPQRNVISWTALIAGYAQTNRPD AIE
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLE+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNI RALEVFENMK KSVITWSTMIAA+ALHGLGG+AIDMF RMEKA+VR NEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYF+RMQS+YKI+P+IEHYGCMIDLLARAGYLQEAQKL  DMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANAAIWGSLLAASN HRDA LAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           KVMRNAGVKKAPGGSFIEINNRVYEFLAGD+SDSQLHG+Y VLC +I+QLKMAGSY EE 
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540

Query: 562 SKFLDYDE 570
           SKFL+YDE
Sbjct: 541 SKFLNYDE 548

BLAST of Lsi06G003790 vs. NCBI nr
Match: XP_038878283.1 (pentatricopeptide repeat-containing protein At5g56310 [Benincasa hispida])

HSP 1 Score: 1011.9 bits (2615), Expect = 2.2e-291
Identity = 508/539 (94.25%), Postives = 520/539 (96.47%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           MRW+LSLLCKSSPSF KP IFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS
Sbjct: 1   MRWSLSLLCKSSPSFAKPTIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           RFIDACSSL LSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSP+NAISLYTRI+I+GLRP
Sbjct: 61  RFIDACSSLDLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPLNAISLYTRIQIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIPFVLKAVVQLSAV VGRQIHTQTVSSALDMDVNVV SLI+MYSSCGFVSDARKLF
Sbjct: 121 DSYSIPFVLKAVVQLSAVEVGRQIHTQTVSSALDMDVNVVASLIRMYSSCGFVSDARKLF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DF GFKDVALWNAMVAGYVKV +LK ARKVFDEMPQRNVISWTALIAGY QTNRPDEAIE
Sbjct: 181 DFAGFKDVALWNAMVAGYVKVGQLKRARKVFDEMPQRNVISWTALIAGYVQTNRPDEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQL+EVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCR VPLYNALIDMYA
Sbjct: 241 LFRKMQLQEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRTVPLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFH MEKAKVR NE+TFIA
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHSMEKAKVRPNEITFIA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRY FDRMQSMYKI PKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYCFDRMQSMYKILPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANAAIWGSLLAASN HRDAGLAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDAGLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEE 561
           KVMRNAGVKKAPGGSFIEINNRVYEF+AGD+SD QL G+YQVLCKLIL LKMA SYQEE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFMAGDESDPQLDGIYQVLCKLILHLKMARSYQEE 539

BLAST of Lsi06G003790 vs. NCBI nr
Match: TYK09984.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 981.5 bits (2536), Expect = 3.1e-282
Identity = 488/548 (89.05%), Postives = 517/548 (94.34%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1   MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           +FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP+NAI LYTRI+I+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPINAIWLYTRIQIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DFV FKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVDFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEIYHVLCKIILQLKMAGSYQEEW 540

Query: 562 SKFLDYDE 570
           SKFL+YDE
Sbjct: 541 SKFLNYDE 548

BLAST of Lsi06G003790 vs. NCBI nr
Match: XP_008450993.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g56310 [Cucumis melo] >KAA0055735.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 980.3 bits (2533), Expect = 6.9e-282
Identity = 487/548 (88.87%), Postives = 517/548 (94.34%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1   MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           +FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP++AI LYTRI+I+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DFVGFKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540

Query: 562 SKFLDYDE 570
            KFL+YDE
Sbjct: 541 CKFLNYDE 548

BLAST of Lsi06G003790 vs. NCBI nr
Match: XP_004144134.2 (pentatricopeptide repeat-containing protein At5g56310 isoform X1 [Cucumis sativus])

HSP 1 Score: 978.4 bits (2528), Expect = 2.6e-281
Identity = 492/548 (89.78%), Postives = 514/548 (93.80%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           M W+ SLL KSS SF KPAIFT+ L FTSLLSNCRH LHLYQIHGFMLHRALDQDNLFLS
Sbjct: 1   MCWSFSLLSKSSSSFFKPAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           +FIDAC+SLGLSSYAFS+FSNKTHPDLRLYNTAIKALS+TSSP+NAI LYTRIRI+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIP VLKAVV+LSAV VGRQIHTQTVSSALDMDVNV TSLIQMYSSCGFVSDARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DFVGFKDVALWNAMVAGYVKV ELKSARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIV LYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWST+IAALALHGLGGEAIDMF RMEKAKVR NEVTF+A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYFD+MQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANA IWGSLLAASN HRDA LA+ AL+HLA+LEP NSGNY LLSNTYAALG+WNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           K+MRNAGVKKAPGGS IEINN VYEFLAGD SDSQ+H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEW 540

Query: 562 SKFLDYDE 570
            K   Y+E
Sbjct: 541 KKMTSYEE 548

BLAST of Lsi06G003790 vs. NCBI nr
Match: XP_011660049.1 (pentatricopeptide repeat-containing protein At5g56310 isoform X2 [Cucumis sativus] >KGN66343.1 hypothetical protein Csa_007622 [Cucumis sativus])

HSP 1 Score: 973.4 bits (2515), Expect = 8.5e-280
Identity = 490/541 (90.57%), Postives = 511/541 (94.45%), Query Frame = 0

Query: 22  MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
           M W+ SLL KSS SF KPAIFT+ L FTSLLSNCRH LHLYQIHGFMLHRALDQDNLFLS
Sbjct: 1   MCWSFSLLSKSSSSFFKPAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS 60

Query: 82  RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
           +FIDAC+SLGLSSYAFS+FSNKTHPDLRLYNTAIKALS+TSSP+NAI LYTRIRI+GLRP
Sbjct: 61  QFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRP 120

Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
           DSYSIP VLKAVV+LSAV VGRQIHTQTVSSALDMDVNV TSLIQMYSSCGFVSDARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180

Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
           DFVGFKDVALWNAMVAGYVKV ELKSARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240

Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
           LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIV LYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300

Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
           KSGNIRRALEVFENMKQKSVITWST+IAALALHGLGGEAIDMF RMEKAKVR NEVTF+A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVA 360

Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
           ILSACSHVGMVDVGRYYFD+MQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420

Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
           ANA IWGSLLAASN HRDA LA+ AL+HLA+LEP NSGNY LLSNTYAALG+WNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVR 480

Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
           K+MRNAGVKKAPGGS IEINN VYEFLAGD SDSQ+H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEW 540

Query: 562 S 563
           S
Sbjct: 541 S 541

BLAST of Lsi06G003790 vs. TAIR 10
Match: AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 530.0 bits (1364), Expect = 2.3e-150
Identity = 273/509 (53.63%), Postives = 372/509 (73.08%), Query Frame = 0

Query: 49  TSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDL 108
           TSL  +  +   L Q H +M+   L++DNL +++FI+ACS+ G   YA+SVF+++  P+ 
Sbjct: 19  TSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNT 78

Query: 109 RLYNTAIKALSQTSSP---VNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQI 168
            L+NT I+ALS    P     AI++Y ++     +PD+++ PFVLK  V++S V  GRQI
Sbjct: 79  YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138

Query: 169 HTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAEL 228
           H Q V    D  V+VVT LIQMY SCG + DARK+FD +  KDV +WNA++AGY KV E+
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198

Query: 229 KSARKVFDEMP--QRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLS 288
             AR + + MP   RN +SWT +I+GYA++ R  EAIE+F++M +E VEPDE+ +LAVLS
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258

Query: 289 ACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVIT 348
           ACADLG+LELGE I +Y++  G+ R V L NA+IDMYAKSGNI +AL+VFE + +++V+T
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318

Query: 349 WSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQ 408
           W+T+IA LA HG G EA+ MF+RM KA VR N+VTFIAILSACSHVG VD+G+  F+ M+
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378

Query: 409 SMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLA 468
           S Y I P IEHYGCMIDLL RAG L+EA +++  MPF+ANAAIWGSLLAASN+H D  L 
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438

Query: 469 EQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNR 528
           E+AL  L +LEP NSGNY LL+N Y+ LGRW+ES M+R +M+  GVKK  G S IE+ NR
Sbjct: 439 ERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498

Query: 529 VYEFLAGDKSDSQLHGMYQVLCKLILQLK 553
           VY+F++GD +  Q+  ++++L ++ LQ++
Sbjct: 499 VYKFISGDLTHPQVERIHEILQEMDLQIQ 527

BLAST of Lsi06G003790 vs. TAIR 10
Match: AT2G20540.1 (mitochondrial editing factor 21 )

HSP 1 Score: 400.6 bits (1028), Expect = 2.1e-111
Identity = 196/472 (41.53%), Postives = 305/472 (64.62%), Query Frame = 0

Query: 63  QIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTS 122
           +I+  ++   L Q +  +++ +D C  +    YA  +F+  ++P++ LYN+ I+A +  S
Sbjct: 28  KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87

Query: 123 SPVNAISLYTRIRIEGLR-PDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVV 182
              + I +Y ++  +    PD ++ PF+ K+   L +  +G+Q+H           V   
Sbjct: 88  LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147

Query: 183 TSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVI 242
            +LI MY     + DA K+FD +  +DV  WN++++GY ++ ++K A+ +F  M  + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207

Query: 243 SWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYI 302
           SWTA+I+GY       EA++ FR+MQL  +EPDEI++++VL +CA LG+LELG+WIH Y 
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267

Query: 303 EKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAI 362
           E+ G  +   + NALI+MY+K G I +A+++F  M+ K VI+WSTMI+  A HG    AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327

Query: 363 DMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDL 422
           + F+ M++AKV+ N +TF+ +LSACSHVGM   G  YFD M+  Y+IEPKIEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387

Query: 423 LARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNY 482
           LARAG L+ A ++   MP + ++ IWGSLL++     +  +A  A+ HL ELEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447

Query: 483 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKS 534
            LL+N YA LG+W +   +RK++RN  +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499

BLAST of Lsi06G003790 vs. TAIR 10
Match: AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 383.6 bits (984), Expect = 2.7e-106
Identity = 191/507 (37.67%), Postives = 311/507 (61.34%), Query Frame = 0

Query: 64  IHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSS 123
           +HG  +  A+  D    +  I    S G    A  VF+     D+  +N+ I    Q  S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212

Query: 124 PVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTS 183
           P  A+ L+ ++  E ++    ++  VL A  ++  +  GRQ+ +    + +++++ +  +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272

Query: 184 LIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISW 243
           ++ MY+ CG + DA++LFD +  KD   W  M+ GY    + ++AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332

Query: 244 TALIAGYAQTNRPDEAIELFRKMQLEE-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 303
            ALI+ Y Q  +P+EA+ +F ++QL++ ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392

Query: 304 KHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAID 363
           KHG+     + +ALI MY+K G++ ++ EVF +++++ V  WS MI  LA+HG G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452

Query: 364 MFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLL 423
           MF++M++A V+ N VTF  +  ACSH G+VD     F +M+S Y I P+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512

Query: 424 ARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYT 483
            R+GYL++A K +  MP   + ++WG+LL A  IH +  LAE A   L ELEP N G + 
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572

Query: 484 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQ 543
           LLSN YA LG+W     +RK MR  G+KK PG S IEI+  ++EFL+GD +      +Y 
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632

Query: 544 VLCKLILQLKMAGSYQEEWSKFLDYDE 570
            L +++ +LK  G Y+ E S+ L   E
Sbjct: 633 KLHEVMEKLKSNG-YEPEISQVLQIIE 658

BLAST of Lsi06G003790 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 374.0 bits (959), Expect = 2.1e-103
Identity = 197/491 (40.12%), Postives = 286/491 (58.25%), Query Frame = 0

Query: 50  SLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSS---YAFSVFSNKTHP 109
           S L  C     L QIH  ML   L QD+  +++F+  C S   S    YA  VF     P
Sbjct: 19  SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78

Query: 110 DLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIH 169
           D  L+N  I+  S +  P  ++ LY R+       ++Y+ P +LKA   LSA     QIH
Sbjct: 79  DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138

Query: 170 TQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELK 229
            Q      + DV  V SLI  Y+  G    A  LFD +   D   WN+++ GYVK  ++ 
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198

Query: 230 SARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACA 289
            A  +F +M ++N ISWT +I+GY Q +   EA++LF +MQ  +VEPD +++   LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258

Query: 290 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWST 349
            LGALE G+WIH+Y+ K  +     L   LIDMYAK G +  ALEVF+N+K+KSV  W+ 
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318

Query: 350 MIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMY 409
           +I+  A HG G EAI  F  M+K  ++ N +TF A+L+ACS+ G+V+ G+  F  M+  Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378

Query: 410 KIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQA 469
            ++P IEHYGC++DLL RAG L EA++ + +MP + NA IWG+LL A  IH++  L E+ 
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438

Query: 470 LRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYE 529
              L  ++P + G Y   +N +A   +W+++   R++M+  GV K PG S I +    +E
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498

Query: 530 FLAGDKSDSQL 538
           FLAGD+S  ++
Sbjct: 499 FLAGDRSHPEI 509

BLAST of Lsi06G003790 vs. TAIR 10
Match: AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 373.6 bits (958), Expect = 2.8e-103
Identity = 203/555 (36.58%), Postives = 319/555 (57.48%), Query Frame = 0

Query: 50  SLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSS---YAFSVFSNKTHP 109
           SLL++C++   L QIHG  +   +D D+ F  + I  C ++ +S    YA  +      P
Sbjct: 10  SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHC-AISISDALPYARRLLLCFPEP 69

Query: 110 DLRLYNTAIKALSQTSSPVNAISLYTRIRIEG-LRPDSYSIPFVLKAVVQLSAVAVGRQI 169
           D  ++NT ++  S++  P N+++++  +  +G + PDS+S  FV+KAV    ++  G Q+
Sbjct: 70  DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 129

Query: 170 HTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF----------------------DF 229
           H Q +   L+  + V T+LI MY  CG V  ARK+F                      D 
Sbjct: 130 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 189

Query: 230 VGFKDV---------ALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTN 289
            G +++           WN M+AGY+K  EL+SA+++F EMP R+ +SW+ +I G A   
Sbjct: 190 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 249

Query: 290 RPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYN 349
             +E+   FR++Q   + P+E+++  VLSAC+  G+ E G+ +H ++EK G   IV + N
Sbjct: 250 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 309

Query: 350 ALIDMYAKSGNIRRALEVFENMKQK-SVITWSTMIAALALHGLGGEAIDMFHRMEKAKVR 409
           ALIDMY++ GN+  A  VFE M++K  +++W++MIA LA+HG G EA+ +F+ M    V 
Sbjct: 310 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 369

Query: 410 ANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQK 469
            + ++FI++L ACSH G+++ G  YF  M+ +Y IEP+IEHYGCM+DL  R+G LQ+A  
Sbjct: 370 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 429

Query: 470 LLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGR 529
            +  MP    A +W +LL A + H +  LAEQ  + L EL+P NSG+  LLSN YA  G+
Sbjct: 430 FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGK 489

Query: 530 WNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKM 569
           W +   +RK M    +KK    S +E+   +Y+F AG+K        ++ L ++IL+LK 
Sbjct: 490 WKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKD 549

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9FMA13.3e-14953.63Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... [more]
Q9SIL53.0e-11041.53Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... [more]
O823803.8e-10537.67Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... [more]
Q9FJY73.0e-10240.12Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... [more]
Q9CA543.9e-10236.58Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A5D3CFJ61.5e-28289.05Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7UQ553.4e-28288.87Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3BR863.4e-28288.87pentatricopeptide repeat-containing protein At5g56310 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0LX334.1e-28090.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598880 PE=4 SV=1[more]
A0A6J1JID85.4e-28089.23pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=366... [more]
Match NameE-valueIdentityDescription
XP_038878283.12.2e-29194.25pentatricopeptide repeat-containing protein At5g56310 [Benincasa hispida][more]
TYK09984.13.1e-28289.05pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa][more]
XP_008450993.16.9e-28288.87PREDICTED: pentatricopeptide repeat-containing protein At5g56310 [Cucumis melo] ... [more]
XP_004144134.22.6e-28189.78pentatricopeptide repeat-containing protein At5g56310 isoform X1 [Cucumis sativu... [more]
XP_011660049.18.5e-28090.57pentatricopeptide repeat-containing protein At5g56310 isoform X2 [Cucumis sativu... [more]
Match NameE-valueIdentityDescription
AT5G56310.12.3e-15053.63Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G20540.12.1e-11141.53mitochondrial editing factor 21 [more]
AT2G29760.12.7e-10637.67Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G66520.12.1e-10340.12Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G74630.12.8e-10336.58Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 377..404
e-value: 0.49
score: 10.8
coord: 414..438
e-value: 0.0017
score: 18.5
coord: 182..202
e-value: 0.12
score: 12.7
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 238..286
e-value: 2.3E-9
score: 37.3
coord: 312..352
e-value: 5.4E-8
score: 32.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 211..239
e-value: 2.3E-4
score: 19.1
coord: 377..410
e-value: 6.0E-4
score: 17.8
coord: 313..340
e-value: 1.7E-6
score: 25.8
coord: 342..375
e-value: 9.8E-6
score: 23.4
coord: 241..275
e-value: 3.3E-8
score: 31.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 309..343
score: 10.413293
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 208..238
score: 9.667924
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 107..141
score: 8.834866
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 239..273
score: 12.353442
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 37..151
e-value: 2.8E-8
score: 35.5
coord: 152..307
e-value: 4.3E-29
score: 103.8
coord: 313..526
e-value: 7.5E-40
score: 139.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 304..478
NoneNo IPR availablePANTHERPTHR47928:SF80PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 46..563
NoneNo IPR availablePANTHERPTHR47928REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATEDcoord: 46..563

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G003790.1Lsi06G003790.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding