Homology
BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match:
Q9FMA1 (Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E13 PE=2 SV=1)
HSP 1 Score: 530.0 bits (1364), Expect = 3.3e-149
Identity = 273/509 (53.63%), Postives = 372/509 (73.08%), Query Frame = 0
Query: 49 TSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDL 108
TSL + + L Q H +M+ L++DNL +++FI+ACS+ G YA+SVF+++ P+
Sbjct: 19 TSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNT 78
Query: 109 RLYNTAIKALSQTSSP---VNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQI 168
L+NT I+ALS P AI++Y ++ +PD+++ PFVLK V++S V GRQI
Sbjct: 79 YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 169 HTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAEL 228
H Q V D V+VVT LIQMY SCG + DARK+FD + KDV +WNA++AGY KV E+
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 229 KSARKVFDEMP--QRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLS 288
AR + + MP RN +SWT +I+GYA++ R EAIE+F++M +E VEPDE+ +LAVLS
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 289 ACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVIT 348
ACADLG+LELGE I +Y++ G+ R V L NA+IDMYAKSGNI +AL+VFE + +++V+T
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 349 WSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQ 408
W+T+IA LA HG G EA+ MF+RM KA VR N+VTFIAILSACSHVG VD+G+ F+ M+
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 409 SMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLA 468
S Y I P IEHYGCMIDLL RAG L+EA +++ MPF+ANAAIWGSLLAASN+H D L
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438
Query: 469 EQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNR 528
E+AL L +LEP NSGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ NR
Sbjct: 439 ERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Query: 529 VYEFLAGDKSDSQLHGMYQVLCKLILQLK 553
VY+F++GD + Q+ ++++L ++ LQ++
Sbjct: 499 VYKFISGDLTHPQVERIHEILQEMDLQIQ 527
BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match:
Q9SIL5 (Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E78 PE=2 SV=1)
HSP 1 Score: 400.6 bits (1028), Expect = 3.0e-110
Identity = 196/472 (41.53%), Postives = 305/472 (64.62%), Query Frame = 0
Query: 63 QIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTS 122
+I+ ++ L Q + +++ +D C + YA +F+ ++P++ LYN+ I+A + S
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 123 SPVNAISLYTRIRIEGLR-PDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVV 182
+ I +Y ++ + PD ++ PF+ K+ L + +G+Q+H V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 183 TSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVI 242
+LI MY + DA K+FD + +DV WN++++GY ++ ++K A+ +F M + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 243 SWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYI 302
SWTA+I+GY EA++ FR+MQL +EPDEI++++VL +CA LG+LELG+WIH Y
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 303 EKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAI 362
E+ G + + NALI+MY+K G I +A+++F M+ K VI+WSTMI+ A HG AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 363 DMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDL 422
+ F+ M++AKV+ N +TF+ +LSACSHVGM G YFD M+ Y+IEPKIEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 423 LARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNY 482
LARAG L+ A ++ MP + ++ IWGSLL++ + +A A+ HL ELEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 483 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKS 534
LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match:
O82380 (Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H33 PE=2 SV=1)
HSP 1 Score: 383.6 bits (984), Expect = 3.8e-105
Identity = 191/507 (37.67%), Postives = 311/507 (61.34%), Query Frame = 0
Query: 64 IHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSS 123
+HG + A+ D + I S G A VF+ D+ +N+ I Q S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 124 PVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTS 183
P A+ L+ ++ E ++ ++ VL A ++ + GRQ+ + + +++++ + +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 184 LIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISW 243
++ MY+ CG + DA++LFD + KD W M+ GY + ++AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 244 TALIAGYAQTNRPDEAIELFRKMQLEE-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 303
ALI+ Y Q +P+EA+ +F ++QL++ ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 304 KHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAID 363
KHG+ + +ALI MY+K G++ ++ EVF +++++ V WS MI LA+HG G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 364 MFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLL 423
MF++M++A V+ N VTF + ACSH G+VD F +M+S Y I P+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 424 ARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYT 483
R+GYL++A K + MP + ++WG+LL A IH + LAE A L ELEP N G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 484 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQ 543
LLSN YA LG+W +RK MR G+KK PG S IEI+ ++EFL+GD + +Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 544 VLCKLILQLKMAGSYQEEWSKFLDYDE 570
L +++ +LK G Y+ E S+ L E
Sbjct: 633 KLHEVMEKLKSNG-YEPEISQVLQIIE 658
BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match:
Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 374.0 bits (959), Expect = 3.0e-102
Identity = 197/491 (40.12%), Postives = 286/491 (58.25%), Query Frame = 0
Query: 50 SLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSS---YAFSVFSNKTHP 109
S L C L QIH ML L QD+ +++F+ C S S YA VF P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 110 DLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIH 169
D L+N I+ S + P ++ LY R+ ++Y+ P +LKA LSA QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 170 TQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELK 229
Q + DV V SLI Y+ G A LFD + D WN+++ GYVK ++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 230 SARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACA 289
A +F +M ++N ISWT +I+GY Q + EA++LF +MQ +VEPD +++ LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 290 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWST 349
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF+N+K+KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 350 MIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMY 409
+I+ A HG G EAI F M+K ++ N +TF A+L+ACS+ G+V+ G+ F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 410 KIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQA 469
++P IEHYGC++DLL RAG L EA++ + +MP + NA IWG+LL A IH++ L E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 470 LRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYE 529
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + +E
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 530 FLAGDKSDSQL 538
FLAGD+S ++
Sbjct: 499 FLAGDRSHPEI 509
BLAST of Lsi06G003790 vs. ExPASy Swiss-Prot
Match:
Q9CA54 (Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H71 PE=2 SV=1)
HSP 1 Score: 373.6 bits (958), Expect = 3.9e-102
Identity = 203/555 (36.58%), Postives = 319/555 (57.48%), Query Frame = 0
Query: 50 SLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSS---YAFSVFSNKTHP 109
SLL++C++ L QIHG + +D D+ F + I C ++ +S YA + P
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHC-AISISDALPYARRLLLCFPEP 69
Query: 110 DLRLYNTAIKALSQTSSPVNAISLYTRIRIEG-LRPDSYSIPFVLKAVVQLSAVAVGRQI 169
D ++NT ++ S++ P N+++++ + +G + PDS+S FV+KAV ++ G Q+
Sbjct: 70 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 129
Query: 170 HTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF----------------------DF 229
H Q + L+ + V T+LI MY CG V ARK+F D
Sbjct: 130 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 189
Query: 230 VGFKDV---------ALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTN 289
G +++ WN M+AGY+K EL+SA+++F EMP R+ +SW+ +I G A
Sbjct: 190 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 249
Query: 290 RPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYN 349
+E+ FR++Q + P+E+++ VLSAC+ G+ E G+ +H ++EK G IV + N
Sbjct: 250 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 309
Query: 350 ALIDMYAKSGNIRRALEVFENMKQK-SVITWSTMIAALALHGLGGEAIDMFHRMEKAKVR 409
ALIDMY++ GN+ A VFE M++K +++W++MIA LA+HG G EA+ +F+ M V
Sbjct: 310 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 369
Query: 410 ANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQK 469
+ ++FI++L ACSH G+++ G YF M+ +Y IEP+IEHYGCM+DL R+G LQ+A
Sbjct: 370 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 429
Query: 470 LLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGR 529
+ MP A +W +LL A + H + LAEQ + L EL+P NSG+ LLSN YA G+
Sbjct: 430 FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGK 489
Query: 530 WNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKM 569
W + +RK M +KK S +E+ +Y+F AG+K ++ L ++IL+LK
Sbjct: 490 WKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKD 549
BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match:
A0A5D3CFJ6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G001140 PE=4 SV=1)
HSP 1 Score: 981.5 bits (2536), Expect = 1.5e-282
Identity = 488/548 (89.05%), Postives = 517/548 (94.34%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
+FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP+NAI LYTRI+I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPINAIWLYTRIQIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DFV FKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVDFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEIYHVLCKIILQLKMAGSYQEEW 540
Query: 562 SKFLDYDE 570
SKFL+YDE
Sbjct: 541 SKFLNYDE 548
BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match:
A0A5A7UQ55 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold181G001200 PE=4 SV=1)
HSP 1 Score: 980.3 bits (2533), Expect = 3.4e-282
Identity = 487/548 (88.87%), Postives = 517/548 (94.34%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
+FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP++AI LYTRI+I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DFVGFKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540
Query: 562 SKFLDYDE 570
KFL+YDE
Sbjct: 541 CKFLNYDE 548
BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match:
A0A1S3BR86 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucumis melo OX=3656 GN=LOC103492408 PE=4 SV=1)
HSP 1 Score: 980.3 bits (2533), Expect = 3.4e-282
Identity = 487/548 (88.87%), Postives = 517/548 (94.34%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
+FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP++AI LYTRI+I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DFVGFKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540
Query: 562 SKFLDYDE 570
KFL+YDE
Sbjct: 541 CKFLNYDE 548
BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match:
A0A0A0LX33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598880 PE=4 SV=1)
HSP 1 Score: 973.4 bits (2515), Expect = 4.1e-280
Identity = 490/541 (90.57%), Postives = 511/541 (94.45%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
M W+ SLL KSS SF KPAIFT+ L FTSLLSNCRH LHLYQIHGFMLHRALDQDNLFLS
Sbjct: 1 MCWSFSLLSKSSSSFFKPAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
+FIDAC+SLGLSSYAFS+FSNKTHPDLRLYNTAIKALS+TSSP+NAI LYTRIRI+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIP VLKAVV+LSAV VGRQIHTQTVSSALDMDVNV TSLIQMYSSCGFVSDARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DFVGFKDVALWNAMVAGYVKV ELKSARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIV LYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWST+IAALALHGLGGEAIDMF RMEKAKVR NEVTF+A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYFD+MQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANA IWGSLLAASN HRDA LA+ AL+HLA+LEP NSGNY LLSNTYAALG+WNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
K+MRNAGVKKAPGGS IEINN VYEFLAGD SDSQ+H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEW 540
Query: 562 S 563
S
Sbjct: 541 S 541
BLAST of Lsi06G003790 vs. ExPASy TrEMBL
Match:
A0A6J1JID8 (pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=3661 GN=LOC111484870 PE=4 SV=1)
HSP 1 Score: 973.0 bits (2514), Expect = 5.4e-280
Identity = 489/548 (89.23%), Postives = 513/548 (93.61%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
MRW+LS LCKSS SF++ IFTAP A TSLLSNCR H+YQIHGFMLHRALDQDNL LS
Sbjct: 1 MRWSLSRLCKSSSSFVESTIFTAPFALTSLLSNCRDSRHIYQIHGFMLHRALDQDNLLLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
RFIDACSSLGL YAFSVFSNKTHPDLRLYNTA+KALSQTSSP+NAISLY+RI IEGLRP
Sbjct: 61 RFIDACSSLGLYLYAFSVFSNKTHPDLRLYNTAVKALSQTSSPINAISLYSRILIEGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSY+IPFVLKAVVQLS V VGRQIHTQTVSS LD DVNVVTSLIQMYSSCG VSDARKLF
Sbjct: 121 DSYTIPFVLKAVVQLSVVEVGRQIHTQTVSSGLDTDVNVVTSLIQMYSSCGCVSDARKLF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
D V +KDVALWNAMVAGYVKVAEL SARKVFD+MPQRNVISWTALIAGYAQTNRPD AIE
Sbjct: 181 DLVDYKDVALWNAMVAGYVKVAELNSARKVFDKMPQRNVISWTALIAGYAQTNRPDAAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLE+VEPDEIAMLAVLSACADLGALELGEWIHNYIEKH LCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEKVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHSLCRIVPLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNI RALEVFENMK KSVITWSTMIAA+ALHGLGG+AIDMF RMEKA+VR NEVTFIA
Sbjct: 301 KSGNIGRALEVFENMKHKSVITWSTMIAAMALHGLGGQAIDMFLRMEKARVRPNEVTFIA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYF+RMQS+YKI+P+IEHYGCMIDLLARAGYLQEAQKL DMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFNRMQSVYKIQPRIEHYGCMIDLLARAGYLQEAQKLFQDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANAAIWGSLLAASN HRDA LAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDADLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
KVMRNAGVKKAPGGSFIEINNRVYEFLAGD+SDSQLHG+Y VLC +I+QLKMAGSY EE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDRSDSQLHGIYPVLCNIIVQLKMAGSYPEEV 540
Query: 562 SKFLDYDE 570
SKFL+YDE
Sbjct: 541 SKFLNYDE 548
BLAST of Lsi06G003790 vs. NCBI nr
Match:
XP_038878283.1 (pentatricopeptide repeat-containing protein At5g56310 [Benincasa hispida])
HSP 1 Score: 1011.9 bits (2615), Expect = 2.2e-291
Identity = 508/539 (94.25%), Postives = 520/539 (96.47%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
MRW+LSLLCKSSPSF KP IFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS
Sbjct: 1 MRWSLSLLCKSSPSFAKPTIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
RFIDACSSL LSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSP+NAISLYTRI+I+GLRP
Sbjct: 61 RFIDACSSLDLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPLNAISLYTRIQIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIPFVLKAVVQLSAV VGRQIHTQTVSSALDMDVNVV SLI+MYSSCGFVSDARKLF
Sbjct: 121 DSYSIPFVLKAVVQLSAVEVGRQIHTQTVSSALDMDVNVVASLIRMYSSCGFVSDARKLF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DF GFKDVALWNAMVAGYVKV +LK ARKVFDEMPQRNVISWTALIAGY QTNRPDEAIE
Sbjct: 181 DFAGFKDVALWNAMVAGYVKVGQLKRARKVFDEMPQRNVISWTALIAGYVQTNRPDEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQL+EVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCR VPLYNALIDMYA
Sbjct: 241 LFRKMQLQEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRTVPLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFH MEKAKVR NE+TFIA
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHSMEKAKVRPNEITFIA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRY FDRMQSMYKI PKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYCFDRMQSMYKILPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANAAIWGSLLAASN HRDAGLAEQALRHLA+LEPENSGNYTLLSNTYAALGRWNESGMVR
Sbjct: 421 ANAAIWGSLLAASNTHRDAGLAEQALRHLAKLEPENSGNYTLLSNTYAALGRWNESGMVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEE 561
KVMRNAGVKKAPGGSFIEINNRVYEF+AGD+SD QL G+YQVLCKLIL LKMA SYQEE
Sbjct: 481 KVMRNAGVKKAPGGSFIEINNRVYEFMAGDESDPQLDGIYQVLCKLILHLKMARSYQEE 539
BLAST of Lsi06G003790 vs. NCBI nr
Match:
TYK09984.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 981.5 bits (2536), Expect = 3.1e-282
Identity = 488/548 (89.05%), Postives = 517/548 (94.34%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
+FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP+NAI LYTRI+I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPINAIWLYTRIQIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DFV FKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVDFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEIYHVLCKIILQLKMAGSYQEEW 540
Query: 562 SKFLDYDE 570
SKFL+YDE
Sbjct: 541 SKFLNYDE 548
BLAST of Lsi06G003790 vs. NCBI nr
Match:
XP_008450993.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g56310 [Cucumis melo] >KAA0055735.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 980.3 bits (2533), Expect = 6.9e-282
Identity = 487/548 (88.87%), Postives = 517/548 (94.34%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
M W+ SLL KSS SF +P+IFT+PL FTSLLSNCRH LHLYQ+HGFMLHRALDQDNLFLS
Sbjct: 1 MCWSFSLLSKSSSSFFRPSIFTSPLQFTSLLSNCRHHLHLYQVHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
+FIDAC+SLGLSSYAFS+FSNK HPDLRLYNTAIKALS+TSSP++AI LYTRI+I+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKAHPDLRLYNTAIKALSKTSSPIDAIWLYTRIQIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIPFVLKAVV+LSAV VGRQIH QTVSSALDMDVNV TSLIQMYSSCGFVSDARK F
Sbjct: 121 DSYSIPFVLKAVVKLSAVEVGRQIHAQTVSSALDMDVNVATSLIQMYSSCGFVSDARKQF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DFVGFKDVALWNAMVAGYVK+ ELK+ARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKIGELKNARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWST+IAALALHGLG EAIDMF RMEK KVR NEVTF A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGREAIDMFLRMEKEKVRPNEVTFTA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYFD+MQSMY+IEP+IEHYGCMIDLLARAGYLQEA KLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYRIEPQIEHYGCMIDLLARAGYLQEAHKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANA IWGSLLAASN H+DAGLA+QAL+HLA+LEPENSGNY LLSNTYAALGRWNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHKDAGLAQQALKHLAKLEPENSGNYVLLSNTYAALGRWNESGTVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
K+MRNAGVKKAPGGS IEINNRVYEFLAGDKSDS +H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNRVYEFLAGDKSDSHVHEVYHVLCKIILQLKMAGSYQEEW 540
Query: 562 SKFLDYDE 570
KFL+YDE
Sbjct: 541 CKFLNYDE 548
BLAST of Lsi06G003790 vs. NCBI nr
Match:
XP_004144134.2 (pentatricopeptide repeat-containing protein At5g56310 isoform X1 [Cucumis sativus])
HSP 1 Score: 978.4 bits (2528), Expect = 2.6e-281
Identity = 492/548 (89.78%), Postives = 514/548 (93.80%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
M W+ SLL KSS SF KPAIFT+ L FTSLLSNCRH LHLYQIHGFMLHRALDQDNLFLS
Sbjct: 1 MCWSFSLLSKSSSSFFKPAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
+FIDAC+SLGLSSYAFS+FSNKTHPDLRLYNTAIKALS+TSSP+NAI LYTRIRI+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIP VLKAVV+LSAV VGRQIHTQTVSSALDMDVNV TSLIQMYSSCGFVSDARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DFVGFKDVALWNAMVAGYVKV ELKSARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIV LYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWST+IAALALHGLGGEAIDMF RMEKAKVR NEVTF+A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYFD+MQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANA IWGSLLAASN HRDA LA+ AL+HLA+LEP NSGNY LLSNTYAALG+WNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
K+MRNAGVKKAPGGS IEINN VYEFLAGD SDSQ+H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEW 540
Query: 562 SKFLDYDE 570
K Y+E
Sbjct: 541 KKMTSYEE 548
BLAST of Lsi06G003790 vs. NCBI nr
Match:
XP_011660049.1 (pentatricopeptide repeat-containing protein At5g56310 isoform X2 [Cucumis sativus] >KGN66343.1 hypothetical protein Csa_007622 [Cucumis sativus])
HSP 1 Score: 973.4 bits (2515), Expect = 8.5e-280
Identity = 490/541 (90.57%), Postives = 511/541 (94.45%), Query Frame = 0
Query: 22 MRWTLSLLCKSSPSFLKPAIFTAPLAFTSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLS 81
M W+ SLL KSS SF KPAIFT+ L FTSLLSNCRH LHLYQIHGFMLHRALDQDNLFLS
Sbjct: 1 MCWSFSLLSKSSSSFFKPAIFTSSLQFTSLLSNCRHHLHLYQIHGFMLHRALDQDNLFLS 60
Query: 82 RFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRP 141
+FIDAC+SLGLSSYAFS+FSNKTHPDLRLYNTAIKALS+TSSP+NAI LYTRIRI+GLRP
Sbjct: 61 QFIDACTSLGLSSYAFSIFSNKTHPDLRLYNTAIKALSKTSSPINAIWLYTRIRIDGLRP 120
Query: 142 DSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF 201
DSYSIP VLKAVV+LSAV VGRQIHTQTVSSALDMDVNV TSLIQMYSSCGFVSDARKLF
Sbjct: 121 DSYSIPSVLKAVVKLSAVEVGRQIHTQTVSSALDMDVNVATSLIQMYSSCGFVSDARKLF 180
Query: 202 DFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIE 261
DFVGFKDVALWNAMVAGYVKV ELKSARKVF+EMPQRNVISWT LIAGYAQTNRP EAIE
Sbjct: 181 DFVGFKDVALWNAMVAGYVKVGELKSARKVFNEMPQRNVISWTTLIAGYAQTNRPHEAIE 240
Query: 262 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYA 321
LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIV LYNALIDMYA
Sbjct: 241 LFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVSLYNALIDMYA 300
Query: 322 KSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIA 381
KSGNIRRALEVFENMKQKSVITWST+IAALALHGLGGEAIDMF RMEKAKVR NEVTF+A
Sbjct: 301 KSGNIRRALEVFENMKQKSVITWSTVIAALALHGLGGEAIDMFLRMEKAKVRPNEVTFVA 360
Query: 382 ILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 441
ILSACSHVGMVDVGRYYFD+MQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE
Sbjct: 361 ILSACSHVGMVDVGRYYFDQMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFE 420
Query: 442 ANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVR 501
ANA IWGSLLAASN HRDA LA+ AL+HLA+LEP NSGNY LLSNTYAALG+WNESG VR
Sbjct: 421 ANAMIWGSLLAASNTHRDAELAQLALKHLAKLEPGNSGNYVLLSNTYAALGKWNESGTVR 480
Query: 502 KVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKMAGSYQEEW 561
K+MRNAGVKKAPGGS IEINN VYEFLAGD SDSQ+H +Y VLCK+ILQLKMAGSYQEEW
Sbjct: 481 KLMRNAGVKKAPGGSVIEINNIVYEFLAGDMSDSQVHEIYHVLCKIILQLKMAGSYQEEW 540
Query: 562 S 563
S
Sbjct: 541 S 541
BLAST of Lsi06G003790 vs. TAIR 10
Match:
AT5G56310.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 530.0 bits (1364), Expect = 2.3e-150
Identity = 273/509 (53.63%), Postives = 372/509 (73.08%), Query Frame = 0
Query: 49 TSLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDL 108
TSL + + L Q H +M+ L++DNL +++FI+ACS+ G YA+SVF+++ P+
Sbjct: 19 TSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRYAYSVFTHQPCPNT 78
Query: 109 RLYNTAIKALSQTSSP---VNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQI 168
L+NT I+ALS P AI++Y ++ +PD+++ PFVLK V++S V GRQI
Sbjct: 79 YLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFGRQI 138
Query: 169 HTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAEL 228
H Q V D V+VVT LIQMY SCG + DARK+FD + KDV +WNA++AGY KV E+
Sbjct: 139 HGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGEM 198
Query: 229 KSARKVFDEMP--QRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLS 288
AR + + MP RN +SWT +I+GYA++ R EAIE+F++M +E VEPDE+ +LAVLS
Sbjct: 199 DEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLS 258
Query: 289 ACADLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVIT 348
ACADLG+LELGE I +Y++ G+ R V L NA+IDMYAKSGNI +AL+VFE + +++V+T
Sbjct: 259 ACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVVT 318
Query: 349 WSTMIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQ 408
W+T+IA LA HG G EA+ MF+RM KA VR N+VTFIAILSACSHVG VD+G+ F+ M+
Sbjct: 319 WTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMR 378
Query: 409 SMYKIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLA 468
S Y I P IEHYGCMIDLL RAG L+EA +++ MPF+ANAAIWGSLLAASN+H D L
Sbjct: 379 SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGSLLAASNVHHDLELG 438
Query: 469 EQALRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNR 528
E+AL L +LEP NSGNY LL+N Y+ LGRW+ES M+R +M+ GVKK G S IE+ NR
Sbjct: 439 ERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGVKKMAGESSIEVENR 498
Query: 529 VYEFLAGDKSDSQLHGMYQVLCKLILQLK 553
VY+F++GD + Q+ ++++L ++ LQ++
Sbjct: 499 VYKFISGDLTHPQVERIHEILQEMDLQIQ 527
BLAST of Lsi06G003790 vs. TAIR 10
Match:
AT2G20540.1 (mitochondrial editing factor 21 )
HSP 1 Score: 400.6 bits (1028), Expect = 2.1e-111
Identity = 196/472 (41.53%), Postives = 305/472 (64.62%), Query Frame = 0
Query: 63 QIHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTS 122
+I+ ++ L Q + +++ +D C + YA +F+ ++P++ LYN+ I+A + S
Sbjct: 28 KINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNS 87
Query: 123 SPVNAISLYTRIRIEGLR-PDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVV 182
+ I +Y ++ + PD ++ PF+ K+ L + +G+Q+H V
Sbjct: 88 LYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTE 147
Query: 183 TSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVI 242
+LI MY + DA K+FD + +DV WN++++GY ++ ++K A+ +F M + ++
Sbjct: 148 NALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIV 207
Query: 243 SWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYI 302
SWTA+I+GY EA++ FR+MQL +EPDEI++++VL +CA LG+LELG+WIH Y
Sbjct: 208 SWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 303 EKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAI 362
E+ G + + NALI+MY+K G I +A+++F M+ K VI+WSTMI+ A HG AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 363 DMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDL 422
+ F+ M++AKV+ N +TF+ +LSACSHVGM G YFD M+ Y+IEPKIEHYGC+ID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 423 LARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNY 482
LARAG L+ A ++ MP + ++ IWGSLL++ + +A A+ HL ELEPE+ GNY
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 483 TLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKS 534
LL+N YA LG+W + +RK++RN +KK PGGS IE+NN V EF++GD S
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPGGSLIEVNNIVQEFVSGDNS 499
BLAST of Lsi06G003790 vs. TAIR 10
Match:
AT2G29760.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 383.6 bits (984), Expect = 2.7e-106
Identity = 191/507 (37.67%), Postives = 311/507 (61.34%), Query Frame = 0
Query: 64 IHGFMLHRALDQDNLFLSRFIDACSSLGLSSYAFSVFSNKTHPDLRLYNTAIKALSQTSS 123
+HG + A+ D + I S G A VF+ D+ +N+ I Q S
Sbjct: 153 LHGMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGS 212
Query: 124 PVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIHTQTVSSALDMDVNVVTS 183
P A+ L+ ++ E ++ ++ VL A ++ + GRQ+ + + +++++ + +
Sbjct: 213 PDKALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANA 272
Query: 184 LIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELKSARKVFDEMPQRNVISW 243
++ MY+ CG + DA++LFD + KD W M+ GY + ++AR+V + MPQ+++++W
Sbjct: 273 MLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAW 332
Query: 244 TALIAGYAQTNRPDEAIELFRKMQLEE-VEPDEIAMLAVLSACADLGALELGEWIHNYIE 303
ALI+ Y Q +P+EA+ +F ++QL++ ++ ++I +++ LSACA +GALELG WIH+YI+
Sbjct: 333 NALISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIK 392
Query: 304 KHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWSTMIAALALHGLGGEAID 363
KHG+ + +ALI MY+K G++ ++ EVF +++++ V WS MI LA+HG G EA+D
Sbjct: 393 KHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVD 452
Query: 364 MFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLL 423
MF++M++A V+ N VTF + ACSH G+VD F +M+S Y I P+ +HY C++D+L
Sbjct: 453 MFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVL 512
Query: 424 ARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYT 483
R+GYL++A K + MP + ++WG+LL A IH + LAE A L ELEP N G +
Sbjct: 513 GRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHV 572
Query: 484 LLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQ 543
LLSN YA LG+W +RK MR G+KK PG S IEI+ ++EFL+GD + +Y
Sbjct: 573 LLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYG 632
Query: 544 VLCKLILQLKMAGSYQEEWSKFLDYDE 570
L +++ +LK G Y+ E S+ L E
Sbjct: 633 KLHEVMEKLKSNG-YEPEISQVLQIIE 658
BLAST of Lsi06G003790 vs. TAIR 10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 374.0 bits (959), Expect = 2.1e-103
Identity = 197/491 (40.12%), Postives = 286/491 (58.25%), Query Frame = 0
Query: 50 SLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSS---YAFSVFSNKTHP 109
S L C L QIH ML L QD+ +++F+ C S S YA VF P
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 110 DLRLYNTAIKALSQTSSPVNAISLYTRIRIEGLRPDSYSIPFVLKAVVQLSAVAVGRQIH 169
D L+N I+ S + P ++ LY R+ ++Y+ P +LKA LSA QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 170 TQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLFDFVGFKDVALWNAMVAGYVKVAELK 229
Q + DV V SLI Y+ G A LFD + D WN+++ GYVK ++
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 230 SARKVFDEMPQRNVISWTALIAGYAQTNRPDEAIELFRKMQLEEVEPDEIAMLAVLSACA 289
A +F +M ++N ISWT +I+GY Q + EA++LF +MQ +VEPD +++ LSACA
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 290 DLGALELGEWIHNYIEKHGLCRIVPLYNALIDMYAKSGNIRRALEVFENMKQKSVITWST 349
LGALE G+WIH+Y+ K + L LIDMYAK G + ALEVF+N+K+KSV W+
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 350 MIAALALHGLGGEAIDMFHRMEKAKVRANEVTFIAILSACSHVGMVDVGRYYFDRMQSMY 409
+I+ A HG G EAI F M+K ++ N +TF A+L+ACS+ G+V+ G+ F M+ Y
Sbjct: 319 LISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDY 378
Query: 410 KIEPKIEHYGCMIDLLARAGYLQEAQKLLHDMPFEANAAIWGSLLAASNIHRDAGLAEQA 469
++P IEHYGC++DLL RAG L EA++ + +MP + NA IWG+LL A IH++ L E+
Sbjct: 379 NLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEEI 438
Query: 470 LRHLAELEPENSGNYTLLSNTYAALGRWNESGMVRKVMRNAGVKKAPGGSFIEINNRVYE 529
L ++P + G Y +N +A +W+++ R++M+ GV K PG S I + +E
Sbjct: 439 GEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISLEGTTHE 498
Query: 530 FLAGDKSDSQL 538
FLAGD+S ++
Sbjct: 499 FLAGDRSHPEI 509
BLAST of Lsi06G003790 vs. TAIR 10
Match:
AT1G74630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 373.6 bits (958), Expect = 2.8e-103
Identity = 203/555 (36.58%), Postives = 319/555 (57.48%), Query Frame = 0
Query: 50 SLLSNCRHPLHLYQIHGFMLHRALDQDNLFLSRFIDACSSLGLSS---YAFSVFSNKTHP 109
SLL++C++ L QIHG + +D D+ F + I C ++ +S YA + P
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLILHC-AISISDALPYARRLLLCFPEP 69
Query: 110 DLRLYNTAIKALSQTSSPVNAISLYTRIRIEG-LRPDSYSIPFVLKAVVQLSAVAVGRQI 169
D ++NT ++ S++ P N+++++ + +G + PDS+S FV+KAV ++ G Q+
Sbjct: 70 DAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQM 129
Query: 170 HTQTVSSALDMDVNVVTSLIQMYSSCGFVSDARKLF----------------------DF 229
H Q + L+ + V T+LI MY CG V ARK+F D
Sbjct: 130 HCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGNDV 189
Query: 230 VGFKDV---------ALWNAMVAGYVKVAELKSARKVFDEMPQRNVISWTALIAGYAQTN 289
G +++ WN M+AGY+K EL+SA+++F EMP R+ +SW+ +I G A
Sbjct: 190 AGAREIFDKMLVRNHTSWNVMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNG 249
Query: 290 RPDEAIELFRKMQLEEVEPDEIAMLAVLSACADLGALELGEWIHNYIEKHGLCRIVPLYN 349
+E+ FR++Q + P+E+++ VLSAC+ G+ E G+ +H ++EK G IV + N
Sbjct: 250 SFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNN 309
Query: 350 ALIDMYAKSGNIRRALEVFENMKQK-SVITWSTMIAALALHGLGGEAIDMFHRMEKAKVR 409
ALIDMY++ GN+ A VFE M++K +++W++MIA LA+HG G EA+ +F+ M V
Sbjct: 310 ALIDMYSRCGNVPMARLVFEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVT 369
Query: 410 ANEVTFIAILSACSHVGMVDVGRYYFDRMQSMYKIEPKIEHYGCMIDLLARAGYLQEAQK 469
+ ++FI++L ACSH G+++ G YF M+ +Y IEP+IEHYGCM+DL R+G LQ+A
Sbjct: 370 PDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYD 429
Query: 470 LLHDMPFEANAAIWGSLLAASNIHRDAGLAEQALRHLAELEPENSGNYTLLSNTYAALGR 529
+ MP A +W +LL A + H + LAEQ + L EL+P NSG+ LLSN YA G+
Sbjct: 430 FICQMPIPPTAIVWRTLLGACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGK 489
Query: 530 WNESGMVRKVMRNAGVKKAPGGSFIEINNRVYEFLAGDKSDSQLHGMYQVLCKLILQLKM 569
W + +RK M +KK S +E+ +Y+F AG+K ++ L ++IL+LK
Sbjct: 490 WKDVASIRKSMIVQRIKKTTAWSLVEVGKTMYKFTAGEKKKGIDIEAHEKLKEIILRLKD 549
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9FMA1 | 3.3e-149 | 53.63 | Pentatricopeptide repeat-containing protein At5g56310 OS=Arabidopsis thaliana OX... | [more] |
Q9SIL5 | 3.0e-110 | 41.53 | Pentatricopeptide repeat-containing protein At2g20540 OS=Arabidopsis thaliana OX... | [more] |
O82380 | 3.8e-105 | 37.67 | Pentatricopeptide repeat-containing protein At2g29760, chloroplastic OS=Arabidop... | [more] |
Q9FJY7 | 3.0e-102 | 40.12 | Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX... | [more] |
Q9CA54 | 3.9e-102 | 36.58 | Pentatricopeptide repeat-containing protein At1g74630 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3CFJ6 | 1.5e-282 | 89.05 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A5A7UQ55 | 3.4e-282 | 88.87 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3BR86 | 3.4e-282 | 88.87 | pentatricopeptide repeat-containing protein At5g56310 OS=Cucumis melo OX=3656 GN... | [more] |
A0A0A0LX33 | 4.1e-280 | 90.57 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G598880 PE=4 SV=1 | [more] |
A0A6J1JID8 | 5.4e-280 | 89.23 | pentatricopeptide repeat-containing protein At5g56310 OS=Cucurbita maxima OX=366... | [more] |
Match Name | E-value | Identity | Description | |
XP_038878283.1 | 2.2e-291 | 94.25 | pentatricopeptide repeat-containing protein At5g56310 [Benincasa hispida] | [more] |
TYK09984.1 | 3.1e-282 | 89.05 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] | [more] |
XP_008450993.1 | 6.9e-282 | 88.87 | PREDICTED: pentatricopeptide repeat-containing protein At5g56310 [Cucumis melo] ... | [more] |
XP_004144134.2 | 2.6e-281 | 89.78 | pentatricopeptide repeat-containing protein At5g56310 isoform X1 [Cucumis sativu... | [more] |
XP_011660049.1 | 8.5e-280 | 90.57 | pentatricopeptide repeat-containing protein At5g56310 isoform X2 [Cucumis sativu... | [more] |
Match Name | E-value | Identity | Description | |
AT5G56310.1 | 2.3e-150 | 53.63 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G20540.1 | 2.1e-111 | 41.53 | mitochondrial editing factor 21 | [more] |
AT2G29760.1 | 2.7e-106 | 37.67 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT5G66520.1 | 2.1e-103 | 40.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G74630.1 | 2.8e-103 | 36.58 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |