Lsi06G002900 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G002900
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	BHLH domain-containing protein
Location	chr06: 3337486 .. 3340494 (+)
RNA-Seq Expression	Lsi06G002900
Synteny	Lsi06G002900

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATTGTCTTCCAACTCCATCAACCCCATCTCCATTGCTTTCTTCAAGATGTAATGCAATCTTTTGGCTGCACTTACATTTGCCTCTGGTCTTATTTCCCTCAACCATTCAAGTCTCTCTCCTCTTTCTCCTCTCTTATTTTCTTGCTTTTTTTTTCTATTTTTTGGGTTGTTTTGTACTGATGTTTTGGACTAATATTGCAGTTGTTTGAGGTTTTTGGATGGGTTCTTGAAGGAGATTGAAGAACAGCCATCTTCTTCTTCTTCTGCTGCTGCTGGGAGTTTAGCTCAGTTGCTTTTTGAAGAATATAAGCTACTGGAATTCAGTGTTGATGATGGGTAATTATTAATACTATATACAAAAAGGGTTAACGTTTCCGTTTTGATAACCATTCGGTTTTTGGCTTTTTAAAACTAAGCTTAGACTAAAAAACAAATGATTATCGAACGAAATGGTTTGGTCTTCATCTTATAAGTGGTTTTGTTTTTGTGTTATTATTATATATTTGTAGGCTTGTTCCAGGACTTGCCCACAAACACAATGATCCTTGTCTGAAGTTGGAGAACTCCCAGCTTCAAACTTATGCTTCTTCTGATGTACAAAGACAGTTTTATCTTGTACGTTTCATTAACGATTTCAAGTAATTTCATTTTTGTTTCACTTCAAATTCAATCATATGTTATATTTTATGTCTTGTTTGTATATTCATTCTTCTTTTCTGGTTTTGTTTGTTCAGGCAGCAGGGATTCAGGTTGGTTACATTATATGGGGAATGGTTTGGATTGACTACTTTTAGAAGTTAAAAATTTCAGTTGGAAGTTAAAATTTTTGGGTTTTGTGTTGGCTTTCATTATATTACAGACTTCAATCTTCTTGGGGAGCATCAATGGTGAAATTGAGCTTGGTTTCTCTAATGTTTCTCAGGTAAAAAATCACAAACTGTACCATATATTCAAAAAAGTTTTGAAGTTTGATTAATTGAATAGTTTTTGAAGGATTTCAGGTTGGCATTCAGATGATAATAAGCAATTTGGTACCTGGTGATGTTGTTGCTCCCAAGGTTCCAATAATGGAGCTTCCTCAGCCATCCACAAACCTAAAACTGATCCCGAGTCCGAGTCCGAGTCCGAGCACGATCCCGATCCCGATCCCGAATCCGAACCCACTTTCATCTTCATCTTCTTCCTTGAGATCACTGTCAATGGACAGCCCTGCAGAATGCTCTTCTCTTCTTCTTAATGTAAGTCAAACCACTCCTAATATCACAGAATCACCCTTCACAACAGCTGACATTCCCATTCTTCAAAGCCAGCTCCAACCTTCCTCCATGGACTCCATTTTTGCTCAAGCAAGAAACCTTCAATTCCCCACACCAGAAGCCTTAGATGAGGCCATGACAAGAACCATTCTAGCAGTTCTTTCTTCATCTTCCTCCTCTGTTCATCAGCCTCTAAAGGAGCTTCTTCCAAGCTACAATTTGAATGTAAAAGCCAGTGCTTTCAAGAAATATGCTAGAATTTTAACCCCGACGACGCGGTTGAATCGAAACTCGAGCACAAGACAAAGCTTGCTCAAGAGATCACTTGCTTTCATGAGAAACTTGAACTTCATGAGGCTTCGAGAGCGCATGCCAACAACAAGTCGACCGACGAGCTCGCAACTACACCATGTGATATCAGAGCGGCGGCGGAGGGAGAAGCTCAATGATAGCTTCCAAGCCTTGAAATCTCTACTCCCTCCCGGAACCAAGGTTCGATCTTTTCACCCTGTTTGAAATAACTTTTTAAATGATTAAGAAAGTCGTCATTCCAAACAAGTCCTTACTTCTTTTTTTTAATATCCGTTAGTGCTGAACTAGCTTACATGCATCTCGACTAATCTTACAGGACAACCCGCATTTTTTTAATATCCGTTAGTGCTGAACTAGCTTACACGCATCTCGACTAATCTTACAGGACAACCCGCATGATTCTAACAAGTCCTTACATTTGATTAATGCAGAAAGACAAAGGATCAGTGCTAACAACTACAAGGGAGTATATGAGTTCTTTGAAAGCTCAAGTGGCTGAGCTTACTAGAAGGAACCAACAACTGGAAGCACAGCTTTTGCAAAGTACTAAAGAAGAAGAAAAAGAAGAAGCAAACATTTTTCCCCAAGAAGAAAGATTCAGAGTTGGAATTTCACAAGTTTCAGAATCCATATCAGAAGGCCAAATTATAGATTTGCATATAGCAACTAGAGGAGAATCTCCATTAACAAACATAGTAATTGGAGTTCTTGAGTTCTTGAAGCAGCTTAACAATGTGAGAGTTGTATCCATGGAAGGCAACACCCAGTTAACACCTTCTTCAAGTTCTATTAACCACCTAACTTTGAGATTAATCATTGAGGTAATTAGAAATTAATTAATGCTTAGTTTCTGCAAACTAAAATATGAAGAAAAAGAACTTGATGAAATCCCAAATGAACAGAATCACAATACAATCACAATTAACCCAAACTCCTTAATGAATAAAAAGTAAATTTGTTTCGAATGACTTTTTAAGTGTTTAAAAACGTGTTTTTAAGCATTTAGAAGAAAGTCTTTCTACATACGTCTAGAATGTTCGAATAATGACTTTTTAAGTGTTTAAAAACGTGTTTTTAAGTAGTTAGATTTCTCGAGAAACTGGGTAGGAAAGTGAAATTAACTTATGTAATCATTTGTTATTTTGAAAGATCAAATATTTCATTAGGAAATGGGAAGGAAATTGGGTGTAAAAGAGCAGGTAAAGAAATGAAGTAGAAAAATGAAAAACTTTAGTTTAAAATTGTTCAACTTTTCTTACTTTTTTCCTTTTTTTTTCCTTAATGAATTAGGAGAATGAATGGGACAAGTCTGCCTTCCAAGAAGCAGTGGAAAGGGTTGTATCTGACCTGGCTAGATGACAACTGGACCAATCACCATCTGCCACCTGGATGTCCTAAAAGAAGAAAAATAATTGGTCAACTGCCCATTTGATCG

mRNA sequence

ATGGATATTGTCTTCCAACTCCATCAACCCCATCTCCATTGCTTTCTTCAAGATGTAATGCAATCTTTTGGCTGCACTTACATTTGCCTCTGTTGTTTGAGGTTTTTGGATGGGTTCTTGAAGGAGATTGAAGAACAGCCATCTTCTTCTTCTTCTGCTGCTGCTGGGAGTTTAGCTCAGTTGCTTTTTGAAGAATATAAGCTACTGGAATTCAGTGTTGATGATGGGCTTGTTCCAGGACTTGCCCACAAACACAATGATCCTTGTCTGAAGTTGGAGAACTCCCAGCTTCAAACTTATGCTTCTTCTGATGTACAAAGACAGTTTTATCTTGCAGCAGGGATTCAGGTTGGTTACATTATATGGGGAATGACTTCAATCTTCTTGGGGAGCATCAATGGTGAAATTGAGCTTGGTTTCTCTAATGTTTCTCAGGTTGGCATTCAGATGATAATAAGCAATTTGGTACCTGGTGATGTTGTTGCTCCCAAGGTTCCAATAATGGAGCTTCCTCAGCCATCCACAAACCTAAAACTGATCCCGAGTCCGAGTCCGAGTCCGAGCACGATCCCGATCCCGATCCCGAATCCGAACCCACTTTCATCTTCATCTTCTTCCTTGAGATCACTGTCAATGGACAGCCCTGCAGAATGCTCTTCTCTTCTTCTTAATGTAAGTCAAACCACTCCTAATATCACAGAATCACCCTTCACAACAGCTGACATTCCCATTCTTCAAAGCCAGCTCCAACCTTCCTCCATGGACTCCATTTTTGCTCAAGCAAGAAACCTTCAATTCCCCACACCAGAAGCCTTAGATGAGGCCATGACAAGAACCATTCTAGCAGTTCTTTCTTCATCTTCCTCCTCTGTTCATCAGCCTCTAAAGGAGCTTCTTCCAAGCTACAATTTGAATGTAAAAGCCAGTGCTTTCAAGAAATATGCTAGAATTTTAACCCCGACGACGCGGTTGAATCGAAACTCGAGCACAAGACAAAGCTTGCTCAAGAGATCACTTGCTTTCATGAGAAACTTGAACTTCATGAGGCTTCGAGAGCGCATGCCAACAACAAGTCGACCGACGAGCTCGCAACTACACCATAAAGACAAAGGATCAGTGCTAACAACTACAAGGGAGTATATGAGTTCTTTGAAAGCTCAAGTGGCTGAGCTTACTAGAAGGAACCAACAACTGGAAGCACAGCTTTTGCAAAGTACTAAAGAAGAAGAAAAAGAAGAAGCAAACATTTTTCCCCAAGAAGAAAGATTCAGAGTTGGAATTTCACAAGTTTCAGAATCCATATCAGAAGGCCAAATTATAGATTTGCATATAGCAACTAGAGGAGAATCTCCATTAACAAACATAGTAATTGGAGTTCTTGAGTTCTTGAAGCAGCTTAACAATGTGAGAGTTGTATCCATGGAAGGCAACACCCAGTTAACACCTTCTTCAAGTTCTATTAACCACCTAACTTTGAGATTAATCATTGAGGAGAATGAATGGGACAAGTCTGCCTTCCAAGAAGCAGTGGAAAGGGTTGTATCTGACCTGGCTAGATGACAACTGGACCAATCACCATCTGCCACCTGGATGTCCTAAAAGAAGAAAAATAATTGGTCAACTGCCCATTTGATCG

Coding sequence (CDS)

ATGGATATTGTCTTCCAACTCCATCAACCCCATCTCCATTGCTTTCTTCAAGATGTAATGCAATCTTTTGGCTGCACTTACATTTGCCTCTGTTGTTTGAGGTTTTTGGATGGGTTCTTGAAGGAGATTGAAGAACAGCCATCTTCTTCTTCTTCTGCTGCTGCTGGGAGTTTAGCTCAGTTGCTTTTTGAAGAATATAAGCTACTGGAATTCAGTGTTGATGATGGGCTTGTTCCAGGACTTGCCCACAAACACAATGATCCTTGTCTGAAGTTGGAGAACTCCCAGCTTCAAACTTATGCTTCTTCTGATGTACAAAGACAGTTTTATCTTGCAGCAGGGATTCAGGTTGGTTACATTATATGGGGAATGACTTCAATCTTCTTGGGGAGCATCAATGGTGAAATTGAGCTTGGTTTCTCTAATGTTTCTCAGGTTGGCATTCAGATGATAATAAGCAATTTGGTACCTGGTGATGTTGTTGCTCCCAAGGTTCCAATAATGGAGCTTCCTCAGCCATCCACAAACCTAAAACTGATCCCGAGTCCGAGTCCGAGTCCGAGCACGATCCCGATCCCGATCCCGAATCCGAACCCACTTTCATCTTCATCTTCTTCCTTGAGATCACTGTCAATGGACAGCCCTGCAGAATGCTCTTCTCTTCTTCTTAATGTAAGTCAAACCACTCCTAATATCACAGAATCACCCTTCACAACAGCTGACATTCCCATTCTTCAAAGCCAGCTCCAACCTTCCTCCATGGACTCCATTTTTGCTCAAGCAAGAAACCTTCAATTCCCCACACCAGAAGCCTTAGATGAGGCCATGACAAGAACCATTCTAGCAGTTCTTTCTTCATCTTCCTCCTCTGTTCATCAGCCTCTAAAGGAGCTTCTTCCAAGCTACAATTTGAATGTAAAAGCCAGTGCTTTCAAGAAATATGCTAGAATTTTAACCCCGACGACGCGGTTGAATCGAAACTCGAGCACAAGACAAAGCTTGCTCAAGAGATCACTTGCTTTCATGAGAAACTTGAACTTCATGAGGCTTCGAGAGCGCATGCCAACAACAAGTCGACCGACGAGCTCGCAACTACACCATAAAGACAAAGGATCAGTGCTAACAACTACAAGGGAGTATATGAGTTCTTTGAAAGCTCAAGTGGCTGAGCTTACTAGAAGGAACCAACAACTGGAAGCACAGCTTTTGCAAAGTACTAAAGAAGAAGAAAAAGAAGAAGCAAACATTTTTCCCCAAGAAGAAAGATTCAGAGTTGGAATTTCACAAGTTTCAGAATCCATATCAGAAGGCCAAATTATAGATTTGCATATAGCAACTAGAGGAGAATCTCCATTAACAAACATAGTAATTGGAGTTCTTGAGTTCTTGAAGCAGCTTAACAATGTGAGAGTTGTATCCATGGAAGGCAACACCCAGTTAACACCTTCTTCAAGTTCTATTAACCACCTAACTTTGAGATTAATCATTGAGGAGAATGAATGGGACAAGTCTGCCTTCCAAGAAGCAGTGGAAAGGGTTGTATCTGACCTGGCTAGATGA

Protein sequence

MDIVFQLHQPHLHCFLQDVMQSFGCTYICLCCLRFLDGFLKEIEEQPSSSSSAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYLAAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELPQPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPNITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLSSSSSSVHQPLKELLPSYNLNVKASAFKKYARILTPTTRLNRNSSTRQSLLKRSLAFMRNLNFMRLRERMPTTSRPTSSQLHHKDKGSVLTTTREYMSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQIIDLHIATRGESPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEENEWDKSAFQEAVERVVSDLAR

Homology

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BLAST of Lsi06G002900 vs. ExPASy Swiss-Prot
Match: Q9LTS4 (Putative transcription factor bHLH041 OS=Arabidopsis thaliana OX=3702 GN=BHLH41 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.1e-34
Identity = 171/542 (31.55%), Postives = 255/542 (47.05%), Query Frame = 0


Query: 27  YICLCC--LRFLDGFLKEIEEQPSSSSSAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHK 86
           ++ L C  L  +DG+  E  E+PSSSSS  +GSLA+ LF EY+     + +G VP +A  
Sbjct: 3   HLILSCSYLISMDGYYNEASEEPSSSSS--SGSLARSLFHEYRQSVIPLQNGHVPSMAFM 62

Query: 87  HNDPCLKLENSQLQTYASSDVQRQFYLAAGIQVGYIIWGMTSIFLGSINGEIELGFSNVS 146
           +N P +++   + Q  A +D QR FY                                  
Sbjct: 63  NNLPYVEIRPQESQRLAFNDTQRLFY---------------------------------- 122

Query: 147 QVGIQMIISNLVPGDVVAPKVPIMELPQPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSS 206
           Q+ I+  +    P D                N K   SP+ S    P     P+  SSSS
Sbjct: 123 QMKIEASLREWFPEDF---------------NRK--SSPANSDYLRP-----PHYPSSSS 182

Query: 207 SSLRSLSMDSPAECSSLLLNVSQTTPNITESPFTTADIPILQSQLQPSSMDSIFAQARNL 266
           S   SLS ++ +E SSLL  +       TE+     ++P+L   L P +M  I  Q +  
Sbjct: 183 S---SLSPNNISEYSSLLFPLIPKPSTTTEA----VNVPVL-PPLAPINM--IHPQHQEP 242

Query: 267 QFPTPEALDEAMTRTILAVLSSSSSSVHQPLKELLPSYNLNVKASAFKKYARILTPTTRL 326
            F   +  +EAMT+ ILAVL+  SS           S     +A+AFK+Y  +++   R 
Sbjct: 243 LFRNRQREEEAMTQAILAVLTGPSSP-----PSTSSSPQRKGRATAFKRYYSMISDRGRA 302

Query: 327 NRNSSTRQSLLKRSLAFMRNLNFMR----LRERMPT--------------TSRPTSSQLH 386
              S  +QS++ R+++F   LN  +     RE   T              TS P+++QL 
Sbjct: 303 PLPSVRKQSMMTRAMSFYNRLNINQRERFTRENATTHGEGSGGSGGGGRYTSGPSATQLQ 362

Query: 387 H---------------------------KDKGSVLTTTREYMSSLKAQVAELTRRNQQLE 446
           H                           KDK SVL+  RE +SSL+ ++++L  RN+++E
Sbjct: 363 HMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREVE 422

Query: 447 AQLLQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQIIDLHIATRGE-SPLTNIVIG 506
           A+L       E+E  N    EERF V I  + ES S  + +DL +  RG+   + +++I 
Sbjct: 423 AKL-----AGEREIENDLRPEERFNVRIRHIPESTSRERTLDLRVVLRGDIIRVDDLMIR 465

Query: 507 VLEFLKQLNNVRVVSMEGNT--QLTPSSSSINHLTLRLIIEENEWDKSAFQEAVERVVSD 519
           +LEFLKQ+NNV +VS+E  T  +    +S +  ++LRL I E EWD+SAFQEAV RVV+D
Sbjct: 483 LLEFLKQINNVSLVSIEARTLARAEGDTSIVLVISLRLKI-EGEWDESAFQEAVRRVVAD 465

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BLAST of Lsi06G002900 vs. ExPASy TrEMBL
Match: A0A1S3BPM6 (putative transcription factor bHLH041 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492336 PE=4 SV=1)

HSP 1 Score: 706.8 bits (1823), Expect = 6.5e-200
Identity = 421/562 (74.91%), Postives = 451/562 (80.25%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDG-FLKEIEEQPSSSS 60
           MDI FQL QPHLH FLQD+MQSFGCTYICL         CLRF DG FLKE +++     
Sbjct: 1   MDIAFQLLQPHLHSFLQDIMQSFGCTYICLWSYFPQPSNCLRFSDGLFLKEFDQE----- 60

Query: 61  SAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYL 120
               GSL+ LLF EY+ LEFSVDDGL+PGLA+KHNDPCLKLENSQLQTYAS+DVQRQFYL
Sbjct: 61  --QVGSLSLLLFREYQQLEFSVDDGLIPGLAYKHNDPCLKLENSQLQTYASADVQRQFYL 120

Query: 121 AAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELP 180
           AAGIQ        TSIFLGSI+GEIELGFS+VSQV I+MIIS+LVP DVVAPKVPIMELP
Sbjct: 121 AAGIQ--------TSIFLGSIHGEIELGFSSVSQVDIEMIISSLVPVDVVAPKVPIMELP 180

Query: 181 QPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPN 240
           QPST  KLIP PS       IPI NPN LSSSSSSLRS SMDSPA               
Sbjct: 181 QPSTKSKLIPGPS------SIPILNPNTLSSSSSSLRSSSMDSPA--------------- 240

Query: 241 ITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SS 300
             ESPFTTADIPILQSQLQPSS++SIFAQARNLQFPTPEALDEAMTRTILAVLS    SS
Sbjct: 241 --ESPFTTADIPILQSQLQPSSINSIFAQARNLQFPTPEALDEAMTRTILAVLSSPACSS 300

Query: 301 SSSVHQPLKELLPSYNLNVKASAFKKYARILTPT-TRLNRNSSTRQSLLKRSLAFMRNLN 360
           SSSVHQPL+ L PSY++NVK+SAFKKYAR+LTPT  RLNRN STRQSLLKRSLAFM NLN
Sbjct: 301 SSSVHQPLENLPPSYHVNVKSSAFKKYARVLTPTKIRLNRNLSTRQSLLKRSLAFMTNLN 360

Query: 361 FMRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTRE 420
            MRLRERMPTTSRPTSSQLHH                           KDKGSVLTTTRE
Sbjct: 361 LMRLRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTRE 420

Query: 421 YMSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEE-RFRVGISQVSESISEGQ 480
           YMSSLKAQVAEL+RRNQQLEAQLLQS+KEEEKEEA +FP+E+ RFRVGISQV ES SEGQ
Sbjct: 421 YMSSLKAQVAELSRRNQQLEAQLLQSSKEEEKEEAILFPREDIRFRVGISQVQESTSEGQ 480

Query: 481 IIDLHIATRGE-SPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIE 520
           IIDL+IATRGE S LTNIVIGVLEFL+QLNNVRV+SM+GNTQLTPSSSSINHLTLRLIIE
Sbjct: 481 IIDLNIATRGESSSLTNIVIGVLEFLRQLNNVRVLSMDGNTQLTPSSSSINHLTLRLIIE 524

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BLAST of Lsi06G002900 vs. ExPASy TrEMBL
Match: A0A0A0M202 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G589140 PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 8.5e-200
Identity = 425/572 (74.30%), Postives = 449/572 (78.50%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDG-FLKEIEEQPSSSS 60
           MDI FQLHQPHLH FLQD+MQSFGCTYICL         CLRF DG FLKE +++     
Sbjct: 1   MDIAFQLHQPHLHSFLQDIMQSFGCTYICLWSYFPQPSNCLRFSDGLFLKEFDQE----- 60

Query: 61  SAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYL 120
               GSL+ LLF EY+ LEFSVDDGL+PGLA+KHNDPCLKLENS+LQTYAS+DVQ+QFYL
Sbjct: 61  --QVGSLSLLLFREYQQLEFSVDDGLIPGLAYKHNDPCLKLENSELQTYASADVQKQFYL 120

Query: 121 AAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELP 180
           AAGIQ        TSIFLGSI+GEIELGFSNVSQV I+MIIS+LVP DVVAPKVPIMELP
Sbjct: 121 AAGIQ--------TSIFLGSIHGEIELGFSNVSQVDIEMIISSLVPVDVVAPKVPIMELP 180

Query: 181 QPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPN 240
           QPST  KLIPS S       IPI NPN LSSSSSSLRSLSMDSPA               
Sbjct: 181 QPSTKSKLIPSLS------SIPILNPNALSSSSSSLRSLSMDSPA--------------- 240

Query: 241 ITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SS 300
             ESPF TADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS    SS
Sbjct: 241 --ESPFPTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLSSPACSS 300

Query: 301 SSSVHQPLKELLPSYNLNVKASAFKKYARILTPTTRLNRNSSTRQSLLKRSLAFMRNLNF 360
           SSSVH PL++L PSY LNVKASAFKK+A +LTPT RLNRN STRQSLLKRSLAFM NLN 
Sbjct: 301 SSSVHPPLEKLPPSYRLNVKASAFKKFALVLTPTMRLNRNLSTRQSLLKRSLAFMTNLNL 360

Query: 361 MRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTREY 420
           MR+RERMPTTSRPTSSQLHH                           KDKGSVLTTTREY
Sbjct: 361 MRVRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTREY 420

Query: 421 MSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEE-RFRVGISQVSESISEGQI 480
           MSSLKAQVAEL+RRNQQLEAQLLQS KEEEKEEA +FPQ+E RFRVGISQV ES SEGQI
Sbjct: 421 MSSLKAQVAELSRRNQQLEAQLLQSCKEEEKEEAILFPQKEIRFRVGISQVQESTSEGQI 480

Query: 481 IDLHIATRGE-SPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIE- 520
           IDL+IATRGE S LTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIE 
Sbjct: 481 IDLNIATRGEFSSLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEE 534

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BLAST of Lsi06G002900 vs. ExPASy TrEMBL
Match: A0A6J1JAZ7 (putative transcription factor bHLH041 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485152 PE=4 SV=1)

HSP 1 Score: 701.4 bits (1809), Expect = 2.7e-198
Identity = 421/561 (75.04%), Postives = 458/561 (81.64%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDGF-LKEIEEQPSSSS 60
           M+I F LH+ H H FLQ +M SFGCTYICL         CLRFLDG  ++EIE Q  SSS
Sbjct: 1   MEIAFHLHESHRHSFLQTLMHSFGCTYICLWSYLPQPSNCLRFLDGLCVQEIEVQTCSSS 60

Query: 61  SAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYL 120
              AGSLAQLLFEEY+ LEFSV+DGLVPGLAHKHNDPCLKLE+SQLQTYAS+D+QR+FYL
Sbjct: 61  ---AGSLAQLLFEEYRQLEFSVEDGLVPGLAHKHNDPCLKLEDSQLQTYASADIQRRFYL 120

Query: 121 AAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELP 180
           AA IQ         SIFLGSINGEIELGFSNVSQV +QMII+NL+PGDVV PK+P +ELP
Sbjct: 121 AARIQ--------ASIFLGSINGEIELGFSNVSQVDMQMIINNLLPGDVVGPKIP-LELP 180

Query: 181 QPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPN 240
           QP+T LKLIPS S S    PIP PNPN LSSS+SSLRS SMDSPAECSSLLLN  QTTP+
Sbjct: 181 QPATKLKLIPSSSLS----PIPNPNPNQLSSSTSSLRSQSMDSPAECSSLLLNAIQTTPH 240

Query: 241 ITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SS 300
           ITE PF TADIPIL SQ Q  SMDSIFAQARNLQFPTPEALDEAMTRTILAVLS    SS
Sbjct: 241 ITE-PF-TADIPILPSQHQ-HSMDSIFAQARNLQFPTPEALDEAMTRTILAVLSSPAGSS 300

Query: 301 SSSVHQPLKELL-PSYNLNVKASAFKKYARILTPTT-RLNRNSSTRQSLLKRSLAFMRNL 360
           SSS+H+ L+ ++ P+Y+LNVKASAFKKYAR+LTPTT RLN+N STRQSLLKRSLAFMRNL
Sbjct: 301 SSSMHKTLEGMITPTYHLNVKASAFKKYARVLTPTTARLNQNLSTRQSLLKRSLAFMRNL 360

Query: 361 NFMRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTR 420
           N MRLRERMPTTSRPTSSQLHH                           KDKGSVLTTTR
Sbjct: 361 NLMRLRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTR 420

Query: 421 EYMSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQ 480
           EYMSSLKAQVAEL+RRNQQLEAQLLQS K+   EE ++F QEERFRVGISQVSES SEGQ
Sbjct: 421 EYMSSLKAQVAELSRRNQQLEAQLLQSAKD---EETSVFSQEERFRVGISQVSESTSEGQ 480

Query: 481 IIDLHIATRGESPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEE 520
           IIDLHI TRGESPLT++VIGVLEFLK LNNVRVVSMEGNTQLTPSSS+ NHLTLRLIIEE
Sbjct: 481 IIDLHITTRGESPLTDMVIGVLEFLKPLNNVRVVSMEGNTQLTPSSST-NHLTLRLIIEE 538

[Close]

BLAST of Lsi06G002900 vs. ExPASy TrEMBL
Match: A0A6J1HAE3 (putative transcription factor bHLH041 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461583 PE=4 SV=1)

HSP 1 Score: 696.0 bits (1795), Expect = 1.2e-196
Identity = 421/561 (75.04%), Postives = 455/561 (81.11%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDGF-LKEIEEQPSSSS 60
           M+I F LH+ H H FLQ +M SFGCTYICL         CLRFLDG  ++EIE Q  SSS
Sbjct: 1   MEIAFHLHESHRHSFLQTLMHSFGCTYICLWSYLPQPSNCLRFLDGLCVQEIEVQTCSSS 60

Query: 61  SAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYL 120
              AGSLAQLLFEEY+ LEFSV+DGLVPGLAHKHNDPCLKLE+SQLQTYAS+D+QRQFYL
Sbjct: 61  ---AGSLAQLLFEEYRQLEFSVEDGLVPGLAHKHNDPCLKLEDSQLQTYASADIQRQFYL 120

Query: 121 AAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELP 180
           AA IQ         SIFLGSINGEIELGFSNVSQV +QMII NL+PGDVV PK+P +ELP
Sbjct: 121 AARIQ--------ASIFLGSINGEIELGFSNVSQVDMQMII-NLLPGDVVGPKIP-LELP 180

Query: 181 QPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPN 240
           QP+T LKLIPSPS S      PIPNPN LSSS+SSLRS SMDSPAECSSLLLN  QTTP+
Sbjct: 181 QPATKLKLIPSPSLS------PIPNPNQLSSSTSSLRSQSMDSPAECSSLLLNAIQTTPH 240

Query: 241 ITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SS 300
           ITE PF TADIPIL SQ Q  SMDSIFAQARNLQFPTPEALDEAMTRTILAVLS    SS
Sbjct: 241 ITE-PF-TADIPILPSQHQ-HSMDSIFAQARNLQFPTPEALDEAMTRTILAVLSSPAGSS 300

Query: 301 SSSVHQPLKELL-PSYNLNVKASAFKKYARILTPTT-RLNRNSSTRQSLLKRSLAFMRNL 360
           SSS+H+ L+ ++ PSY+LNVKASAFKKYAR+ TPTT RLN+N STRQSLLKRSLAFMRNL
Sbjct: 301 SSSMHKTLEGMITPSYHLNVKASAFKKYARVQTPTTARLNQNLSTRQSLLKRSLAFMRNL 360

Query: 361 NFMRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTR 420
           N MRLRERMPT SRPT+SQLHH                           KDKGSVLTTTR
Sbjct: 361 NLMRLRERMPTASRPTTSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTR 420

Query: 421 EYMSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQ 480
           EYMSSLKAQVAEL+RRNQQLEAQLLQS KE   EE ++F QEERFRVGISQVSES SEGQ
Sbjct: 421 EYMSSLKAQVAELSRRNQQLEAQLLQSAKE---EETSVFSQEERFRVGISQVSESTSEGQ 480

Query: 481 IIDLHIATRGESPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEE 520
           IIDLHI TRGESPLT++VIGVLEFLK LNNVRVVSMEGNTQLTPSSS+ NHLTLRLIIEE
Sbjct: 481 IIDLHITTRGESPLTDMVIGVLEFLKPLNNVRVVSMEGNTQLTPSSST-NHLTLRLIIEE 535

[Close]

BLAST of Lsi06G002900 vs. ExPASy TrEMBL
Match: A0A6J1JEY5 (putative transcription factor bHLH041 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485152 PE=4 SV=1)

HSP 1 Score: 688.0 bits (1774), Expect = 3.1e-194
Identity = 421/597 (70.52%), Postives = 458/597 (76.72%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICL------------------------------ 60
           M+I F LH+ H H FLQ +M SFGCTYICL                              
Sbjct: 1   MEIAFHLHESHRHSFLQTLMHSFGCTYICLWSYLPQPSKYLISLSLPLLSLLYFLLGFGH 60

Query: 61  --------------CCLRFLDGF-LKEIEEQPSSSSSAAAGSLAQLLFEEYKLLEFSVDD 120
                          CLRFLDG  ++EIE Q  SSS   AGSLAQLLFEEY+ LEFSV+D
Sbjct: 61  FVLMGFGSFLDMTCSCLRFLDGLCVQEIEVQTCSSS---AGSLAQLLFEEYRQLEFSVED 120

Query: 121 GLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYLAAGIQVGYIIWGMTSIFLGSINGE 180
           GLVPGLAHKHNDPCLKLE+SQLQTYAS+D+QR+FYLAA IQ         SIFLGSINGE
Sbjct: 121 GLVPGLAHKHNDPCLKLEDSQLQTYASADIQRRFYLAARIQ--------ASIFLGSINGE 180

Query: 181 IELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELPQPSTNLKLIPSPSPSPSTIPIPIP 240
           IELGFSNVSQV +QMII+NL+PGDVV PK+P +ELPQP+T LKLIPS S S    PIP P
Sbjct: 181 IELGFSNVSQVDMQMIINNLLPGDVVGPKIP-LELPQPATKLKLIPSSSLS----PIPNP 240

Query: 241 NPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPNITESPFTTADIPILQSQLQPSSMD 300
           NPN LSSS+SSLRS SMDSPAECSSLLLN  QTTP+ITE PF TADIPIL SQ Q  SMD
Sbjct: 241 NPNQLSSSTSSLRSQSMDSPAECSSLLLNAIQTTPHITE-PF-TADIPILPSQHQ-HSMD 300

Query: 301 SIFAQARNLQFPTPEALDEAMTRTILAVLS----SSSSSVHQPLKELL-PSYNLNVKASA 360
           SIFAQARNLQFPTPEALDEAMTRTILAVLS    SSSSS+H+ L+ ++ P+Y+LNVKASA
Sbjct: 301 SIFAQARNLQFPTPEALDEAMTRTILAVLSSPAGSSSSSMHKTLEGMITPTYHLNVKASA 360

Query: 361 FKKYARILTPTT-RLNRNSSTRQSLLKRSLAFMRNLNFMRLRERMPTTSRPTSSQLHH-- 420
           FKKYAR+LTPTT RLN+N STRQSLLKRSLAFMRNLN MRLRERMPTTSRPTSSQLHH  
Sbjct: 361 FKKYARVLTPTTARLNQNLSTRQSLLKRSLAFMRNLNLMRLRERMPTTSRPTSSQLHHVI 420

Query: 421 -------------------------KDKGSVLTTTREYMSSLKAQVAELTRRNQQLEAQL 480
                                    KDKGSVLTTTREYMSSLKAQVAEL+RRNQQLEAQL
Sbjct: 421 SERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTREYMSSLKAQVAELSRRNQQLEAQL 480

Query: 481 LQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQIIDLHIATRGESPLTNIVIGVLEF 520
           LQS K+   EE ++F QEERFRVGISQVSES SEGQIIDLHI TRGESPLT++VIGVLEF
Sbjct: 481 LQSAKD---EETSVFSQEERFRVGISQVSESTSEGQIIDLHITTRGESPLTDMVIGVLEF 540

[Close]

BLAST of Lsi06G002900 vs. NCBI nr
Match: XP_038878716.1 (putative transcription factor bHLH041 isoform X1 [Benincasa hispida])

HSP 1 Score: 781.9 bits (2018), Expect = 3.3e-222
Identity = 454/559 (81.22%), Postives = 466/559 (83.36%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDGFLKEIEEQPSSSSS 60
           MDI FQLHQPHLH FLQDVMQSFGCTYICL         CLRF DGFLKEIEEQP  SSS
Sbjct: 1   MDIAFQLHQPHLHSFLQDVMQSFGCTYICLWSYFPQPFNCLRFSDGFLKEIEEQP-CSSS 60

Query: 61  AAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYLA 120
           AAAGSLA+LLFEEYK LEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYLA
Sbjct: 61  AAAGSLARLLFEEYKQLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYLA 120

Query: 121 AGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELPQ 180
           AGIQ        TSIFLGSINGEIELGFSNVS V IQMIISNLVPGDVVAPKV IMELPQ
Sbjct: 121 AGIQ--------TSIFLGSINGEIELGFSNVSLVDIQMIISNLVPGDVVAPKVSIMELPQ 180

Query: 181 PSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPNI 240
           PST LKLIPSPSPSPS    PIP PNPLSSSSSSLRSLSMDSPA                
Sbjct: 181 PSTKLKLIPSPSPSPS----PIPIPNPLSSSSSSLRSLSMDSPA---------------- 240

Query: 241 TESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SSS 300
            ESPFTTADI I QSQLQPSSMDSIFAQARNLQFP+PEALDEAMTRTILAVLS    SSS
Sbjct: 241 -ESPFTTADISIRQSQLQPSSMDSIFAQARNLQFPSPEALDEAMTRTILAVLSSPACSSS 300

Query: 301 SSVHQPLKELLPSYNLNVKASAFKKYARILTP-TTRLNRNSSTRQSLLKRSLAFMRNLNF 360
           SSVHQPL++LLPSY+LNVKASAFKKYAR+ TP TTRLNR SSTRQSLLKRS AFMRNLN 
Sbjct: 301 SSVHQPLEKLLPSYHLNVKASAFKKYARVSTPMTTRLNRKSSTRQSLLKRSFAFMRNLNL 360

Query: 361 MRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTREY 420
           MRLRERMPTTSRPTSSQLHH                           KDKGSVLTTTREY
Sbjct: 361 MRLRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTREY 420

Query: 421 MSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQII 480
           +SSLKAQVAEL+RRNQQLEAQLLQS KEE K+EAN FPQEERFRVGISQV ES SEGQII
Sbjct: 421 VSSLKAQVAELSRRNQQLEAQLLQSAKEEGKKEANFFPQEERFRVGISQVQESTSEGQII 480

Query: 481 DLHIATRGESPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEENE 520
           DLHIATRGESPL NI+IGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEENE
Sbjct: 481 DLHIATRGESPLINIIIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEENE 529

[Close]

BLAST of Lsi06G002900 vs. NCBI nr
Match: XP_011659992.1 (putative transcription factor bHLH041 isoform X1 [Cucumis sativus])

HSP 1 Score: 714.9 bits (1844), Expect = 5.0e-202
Identity = 425/561 (75.76%), Postives = 449/561 (80.04%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDG-FLKEIEEQPSSSS 60
           MDI FQLHQPHLH FLQD+MQSFGCTYICL         CLRF DG FLKE +++     
Sbjct: 1   MDIAFQLHQPHLHSFLQDIMQSFGCTYICLWSYFPQPSNCLRFSDGLFLKEFDQE----- 60

Query: 61  SAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYL 120
               GSL+ LLF EY+ LEFSVDDGL+PGLA+KHNDPCLKLENS+LQTYAS+DVQ+QFYL
Sbjct: 61  --QVGSLSLLLFREYQQLEFSVDDGLIPGLAYKHNDPCLKLENSELQTYASADVQKQFYL 120

Query: 121 AAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELP 180
           AAGIQ        TSIFLGSI+GEIELGFSNVSQV I+MIIS+LVP DVVAPKVPIMELP
Sbjct: 121 AAGIQ--------TSIFLGSIHGEIELGFSNVSQVDIEMIISSLVPVDVVAPKVPIMELP 180

Query: 181 QPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPN 240
           QPST  KLIPS S       IPI NPN LSSSSSSLRSLSMDSPA               
Sbjct: 181 QPSTKSKLIPSLS------SIPILNPNALSSSSSSLRSLSMDSPA--------------- 240

Query: 241 ITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SS 300
             ESPF TADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS    SS
Sbjct: 241 --ESPFPTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLSSPACSS 300

Query: 301 SSSVHQPLKELLPSYNLNVKASAFKKYARILTPTTRLNRNSSTRQSLLKRSLAFMRNLNF 360
           SSSVH PL++L PSY LNVKASAFKK+A +LTPT RLNRN STRQSLLKRSLAFM NLN 
Sbjct: 301 SSSVHPPLEKLPPSYRLNVKASAFKKFALVLTPTMRLNRNLSTRQSLLKRSLAFMTNLNL 360

Query: 361 MRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTREY 420
           MR+RERMPTTSRPTSSQLHH                           KDKGSVLTTTREY
Sbjct: 361 MRVRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTREY 420

Query: 421 MSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEE-RFRVGISQVSESISEGQI 480
           MSSLKAQVAEL+RRNQQLEAQLLQS KEEEKEEA +FPQ+E RFRVGISQV ES SEGQI
Sbjct: 421 MSSLKAQVAELSRRNQQLEAQLLQSCKEEEKEEAILFPQKEIRFRVGISQVQESTSEGQI 480

Query: 481 IDLHIATRGE-SPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEE 520
           IDL+IATRGE S LTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEE
Sbjct: 481 IDLNIATRGEFSSLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEE 523

[Close]

BLAST of Lsi06G002900 vs. NCBI nr
Match: XP_023516380.1 (putative transcription factor bHLH041 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 712.2 bits (1837), Expect = 3.2e-201
Identity = 425/561 (75.76%), Postives = 459/561 (81.82%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDGF-LKEIEEQPSSSS 60
           M+I F LH+ H H FLQ +M SFGCTYICL         CLRFLDG  ++EIE Q  SSS
Sbjct: 1   MEIAFHLHESHRHSFLQTLMHSFGCTYICLWSYLPQPSNCLRFLDGLCVQEIEVQTCSSS 60

Query: 61  SAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYL 120
              AGSLAQLLFEEY+ LEFSV+DGLVPGLAHKHNDPCLKLE+SQLQTYAS+D+QRQFYL
Sbjct: 61  ---AGSLAQLLFEEYRQLEFSVEDGLVPGLAHKHNDPCLKLEDSQLQTYASADIQRQFYL 120

Query: 121 AAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELP 180
           AA IQ         SIFLGSINGEIELGFSNVSQV +QMII+NL+PGDVV PK+P +ELP
Sbjct: 121 AARIQ--------ASIFLGSINGEIELGFSNVSQVDMQMIINNLLPGDVVGPKIP-LELP 180

Query: 181 QPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPN 240
           QP+T LKLIPSPS SP   P P PNPN LSSS+SSLRS SMDSPAECSSLLLN  QTTP+
Sbjct: 181 QPATKLKLIPSPSLSPIPNPNPNPNPNQLSSSTSSLRSQSMDSPAECSSLLLNAIQTTPH 240

Query: 241 ITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SS 300
           ITE PF TADIPIL SQ Q  SMDSIFAQARNLQFPTPEALDEAMTRTILAVLS    SS
Sbjct: 241 ITE-PF-TADIPILPSQHQ-HSMDSIFAQARNLQFPTPEALDEAMTRTILAVLSSPAGSS 300

Query: 301 SSSVHQPLKELL-PSYNLNVKASAFKKYARILTPTT-RLNRNSSTRQSLLKRSLAFMRNL 360
           SSS+H+ L+ ++ PSY+LNVKASAFKKYAR+LTPTT RLN+N STRQSLLKRSLAFMRNL
Sbjct: 301 SSSMHKTLEGMITPSYHLNVKASAFKKYARVLTPTTARLNQNMSTRQSLLKRSLAFMRNL 360

Query: 361 NFMRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTR 420
           N MRLRERMPTTSRPTSSQLHH                           KDKGSVLTTTR
Sbjct: 361 NLMRLRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTR 420

Query: 421 EYMSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQ 480
           EYMSSLKAQVAEL+RRNQQLEAQLLQS KE   EE ++FPQEERFRVGISQVSES SEGQ
Sbjct: 421 EYMSSLKAQVAELSRRNQQLEAQLLQSAKE---EETSVFPQEERFRVGISQVSESTSEGQ 480

Query: 481 IIDLHIATRGESPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEE 520
           IIDLHI TRGESPLT++VIGVLEFLK LNNVRVVSMEGNTQLTPSSS+ NHL LRLIIEE
Sbjct: 481 IIDLHITTRGESPLTDMVIGVLEFLKPLNNVRVVSMEGNTQLTPSSST-NHLNLRLIIEE 540

[Close]

BLAST of Lsi06G002900 vs. NCBI nr
Match: XP_008450872.1 (PREDICTED: putative transcription factor bHLH041 isoform X1 [Cucumis melo])

HSP 1 Score: 706.8 bits (1823), Expect = 1.4e-199
Identity = 421/562 (74.91%), Postives = 451/562 (80.25%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDG-FLKEIEEQPSSSS 60
           MDI FQL QPHLH FLQD+MQSFGCTYICL         CLRF DG FLKE +++     
Sbjct: 1   MDIAFQLLQPHLHSFLQDIMQSFGCTYICLWSYFPQPSNCLRFSDGLFLKEFDQE----- 60

Query: 61  SAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYL 120
               GSL+ LLF EY+ LEFSVDDGL+PGLA+KHNDPCLKLENSQLQTYAS+DVQRQFYL
Sbjct: 61  --QVGSLSLLLFREYQQLEFSVDDGLIPGLAYKHNDPCLKLENSQLQTYASADVQRQFYL 120

Query: 121 AAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELP 180
           AAGIQ        TSIFLGSI+GEIELGFS+VSQV I+MIIS+LVP DVVAPKVPIMELP
Sbjct: 121 AAGIQ--------TSIFLGSIHGEIELGFSSVSQVDIEMIISSLVPVDVVAPKVPIMELP 180

Query: 181 QPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPN 240
           QPST  KLIP PS       IPI NPN LSSSSSSLRS SMDSPA               
Sbjct: 181 QPSTKSKLIPGPS------SIPILNPNTLSSSSSSLRSSSMDSPA--------------- 240

Query: 241 ITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SS 300
             ESPFTTADIPILQSQLQPSS++SIFAQARNLQFPTPEALDEAMTRTILAVLS    SS
Sbjct: 241 --ESPFTTADIPILQSQLQPSSINSIFAQARNLQFPTPEALDEAMTRTILAVLSSPACSS 300

Query: 301 SSSVHQPLKELLPSYNLNVKASAFKKYARILTPT-TRLNRNSSTRQSLLKRSLAFMRNLN 360
           SSSVHQPL+ L PSY++NVK+SAFKKYAR+LTPT  RLNRN STRQSLLKRSLAFM NLN
Sbjct: 301 SSSVHQPLENLPPSYHVNVKSSAFKKYARVLTPTKIRLNRNLSTRQSLLKRSLAFMTNLN 360

Query: 361 FMRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTRE 420
            MRLRERMPTTSRPTSSQLHH                           KDKGSVLTTTRE
Sbjct: 361 LMRLRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTRE 420

Query: 421 YMSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEE-RFRVGISQVSESISEGQ 480
           YMSSLKAQVAEL+RRNQQLEAQLLQS+KEEEKEEA +FP+E+ RFRVGISQV ES SEGQ
Sbjct: 421 YMSSLKAQVAELSRRNQQLEAQLLQSSKEEEKEEAILFPREDIRFRVGISQVQESTSEGQ 480

Query: 481 IIDLHIATRGE-SPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIE 520
           IIDL+IATRGE S LTNIVIGVLEFL+QLNNVRV+SM+GNTQLTPSSSSINHLTLRLIIE
Sbjct: 481 IIDLNIATRGESSSLTNIVIGVLEFLRQLNNVRVLSMDGNTQLTPSSSSINHLTLRLIIE 524

[Close]

BLAST of Lsi06G002900 vs. NCBI nr
Match: XP_022987667.1 (putative transcription factor bHLH041 isoform X2 [Cucurbita maxima])

HSP 1 Score: 701.4 bits (1809), Expect = 5.7e-198
Identity = 421/561 (75.04%), Postives = 458/561 (81.64%), Query Frame = 0


Query: 1   MDIVFQLHQPHLHCFLQDVMQSFGCTYICLC--------CLRFLDGF-LKEIEEQPSSSS 60
           M+I F LH+ H H FLQ +M SFGCTYICL         CLRFLDG  ++EIE Q  SSS
Sbjct: 1   MEIAFHLHESHRHSFLQTLMHSFGCTYICLWSYLPQPSNCLRFLDGLCVQEIEVQTCSSS 60

Query: 61  SAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHKHNDPCLKLENSQLQTYASSDVQRQFYL 120
              AGSLAQLLFEEY+ LEFSV+DGLVPGLAHKHNDPCLKLE+SQLQTYAS+D+QR+FYL
Sbjct: 61  ---AGSLAQLLFEEYRQLEFSVEDGLVPGLAHKHNDPCLKLEDSQLQTYASADIQRRFYL 120

Query: 121 AAGIQVGYIIWGMTSIFLGSINGEIELGFSNVSQVGIQMIISNLVPGDVVAPKVPIMELP 180
           AA IQ         SIFLGSINGEIELGFSNVSQV +QMII+NL+PGDVV PK+P +ELP
Sbjct: 121 AARIQ--------ASIFLGSINGEIELGFSNVSQVDMQMIINNLLPGDVVGPKIP-LELP 180

Query: 181 QPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSSSSLRSLSMDSPAECSSLLLNVSQTTPN 240
           QP+T LKLIPS S S    PIP PNPN LSSS+SSLRS SMDSPAECSSLLLN  QTTP+
Sbjct: 181 QPATKLKLIPSSSLS----PIPNPNPNQLSSSTSSLRSQSMDSPAECSSLLLNAIQTTPH 240

Query: 241 ITESPFTTADIPILQSQLQPSSMDSIFAQARNLQFPTPEALDEAMTRTILAVLS----SS 300
           ITE PF TADIPIL SQ Q  SMDSIFAQARNLQFPTPEALDEAMTRTILAVLS    SS
Sbjct: 241 ITE-PF-TADIPILPSQHQ-HSMDSIFAQARNLQFPTPEALDEAMTRTILAVLSSPAGSS 300

Query: 301 SSSVHQPLKELL-PSYNLNVKASAFKKYARILTPTT-RLNRNSSTRQSLLKRSLAFMRNL 360
           SSS+H+ L+ ++ P+Y+LNVKASAFKKYAR+LTPTT RLN+N STRQSLLKRSLAFMRNL
Sbjct: 301 SSSMHKTLEGMITPTYHLNVKASAFKKYARVLTPTTARLNQNLSTRQSLLKRSLAFMRNL 360

Query: 361 NFMRLRERMPTTSRPTSSQLHH---------------------------KDKGSVLTTTR 420
           N MRLRERMPTTSRPTSSQLHH                           KDKGSVLTTTR
Sbjct: 361 NLMRLRERMPTTSRPTSSQLHHVISERRRREKLNDSFQALKSLLPPGTKKDKGSVLTTTR 420

Query: 421 EYMSSLKAQVAELTRRNQQLEAQLLQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQ 480
           EYMSSLKAQVAEL+RRNQQLEAQLLQS K+   EE ++F QEERFRVGISQVSES SEGQ
Sbjct: 421 EYMSSLKAQVAELSRRNQQLEAQLLQSAKD---EETSVFSQEERFRVGISQVSESTSEGQ 480

Query: 481 IIDLHIATRGESPLTNIVIGVLEFLKQLNNVRVVSMEGNTQLTPSSSSINHLTLRLIIEE 520
           IIDLHI TRGESPLT++VIGVLEFLK LNNVRVVSMEGNTQLTPSSS+ NHLTLRLIIEE
Sbjct: 481 IIDLHITTRGESPLTDMVIGVLEFLKPLNNVRVVSMEGNTQLTPSSST-NHLTLRLIIEE 538

[Close]

BLAST of Lsi06G002900 vs. TAIR 10
Match: AT5G56960.1 (basic helix-loop-helix (bHLH) DNA-binding family protein )

HSP 1 Score: 146.7 bits (369), Expect = 5.0e-35
Identity = 171/542 (31.55%), Postives = 255/542 (47.05%), Query Frame = 0


Query: 27  YICLCC--LRFLDGFLKEIEEQPSSSSSAAAGSLAQLLFEEYKLLEFSVDDGLVPGLAHK 86
           ++ L C  L  +DG+  E  E+PSSSSS  +GSLA+ LF EY+     + +G VP +A  
Sbjct: 3   HLILSCSYLISMDGYYNEASEEPSSSSS--SGSLARSLFHEYRQSVIPLQNGHVPSMAFM 62

Query: 87  HNDPCLKLENSQLQTYASSDVQRQFYLAAGIQVGYIIWGMTSIFLGSINGEIELGFSNVS 146
           +N P +++   + Q  A +D QR FY                                  
Sbjct: 63  NNLPYVEIRPQESQRLAFNDTQRLFY---------------------------------- 122

Query: 147 QVGIQMIISNLVPGDVVAPKVPIMELPQPSTNLKLIPSPSPSPSTIPIPIPNPNPLSSSS 206
           Q+ I+  +    P D                N K   SP+ S    P     P+  SSSS
Sbjct: 123 QMKIEASLREWFPEDF---------------NRK--SSPANSDYLRP-----PHYPSSSS 182

Query: 207 SSLRSLSMDSPAECSSLLLNVSQTTPNITESPFTTADIPILQSQLQPSSMDSIFAQARNL 266
           S   SLS ++ +E SSLL  +       TE+     ++P+L   L P +M  I  Q +  
Sbjct: 183 S---SLSPNNISEYSSLLFPLIPKPSTTTEA----VNVPVL-PPLAPINM--IHPQHQEP 242

Query: 267 QFPTPEALDEAMTRTILAVLSSSSSSVHQPLKELLPSYNLNVKASAFKKYARILTPTTRL 326
            F   +  +EAMT+ ILAVL+  SS           S     +A+AFK+Y  +++   R 
Sbjct: 243 LFRNRQREEEAMTQAILAVLTGPSSP-----PSTSSSPQRKGRATAFKRYYSMISDRGRA 302

Query: 327 NRNSSTRQSLLKRSLAFMRNLNFMR----LRERMPT--------------TSRPTSSQLH 386
              S  +QS++ R+++F   LN  +     RE   T              TS P+++QL 
Sbjct: 303 PLPSVRKQSMMTRAMSFYNRLNINQRERFTRENATTHGEGSGGSGGGGRYTSGPSATQLQ 362

Query: 387 H---------------------------KDKGSVLTTTREYMSSLKAQVAELTRRNQQLE 446
           H                           KDK SVL+  RE +SSL+ ++++L  RN+++E
Sbjct: 363 HMISERKRREKLNESFQALRSLLPPGTKKDKASVLSIAREQLSSLQGEISKLLERNREVE 422

Query: 447 AQLLQSTKEEEKEEANIFPQEERFRVGISQVSESISEGQIIDLHIATRGE-SPLTNIVIG 506
           A+L       E+E  N    EERF V I  + ES S  + +DL +  RG+   + +++I 
Sbjct: 423 AKL-----AGEREIENDLRPEERFNVRIRHIPESTSRERTLDLRVVLRGDIIRVDDLMIR 465

Query: 507 VLEFLKQLNNVRVVSMEGNT--QLTPSSSSINHLTLRLIIEENEWDKSAFQEAVERVVSD 519
           +LEFLKQ+NNV +VS+E  T  +    +S +  ++LRL I E EWD+SAFQEAV RVV+D
Sbjct: 483 LLEFLKQINNVSLVSIEARTLARAEGDTSIVLVISLRLKI-EGEWDESAFQEAVRRVVAD 465

The following BLAST results are available for this feature:

BLAST of Lsi06G002900 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTS4	7.1e-34	31.55	Putative transcription factor bHLH041 OS=Arabidopsis thaliana OX=3702 GN=BHLH41 ...	[more]

BLAST of Lsi06G002900 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BPM6	6.5e-200	74.91	putative transcription factor bHLH041 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
A0A0A0M202	8.5e-200	74.30	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G589140 PE=4 S...	[more]
A0A6J1JAZ7	2.7e-198	75.04	putative transcription factor bHLH041 isoform X2 OS=Cucurbita maxima OX=3661 GN=...	[more]
A0A6J1HAE3	1.2e-196	75.04	putative transcription factor bHLH041 isoform X2 OS=Cucurbita moschata OX=3662 G...	[more]
A0A6J1JEY5	3.1e-194	70.52	putative transcription factor bHLH041 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Lsi06G002900 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878716.1	3.3e-222	81.22	putative transcription factor bHLH041 isoform X1 [Benincasa hispida]	[more]
XP_011659992.1	5.0e-202	75.76	putative transcription factor bHLH041 isoform X1 [Cucumis sativus]	[more]
XP_023516380.1	3.2e-201	75.76	putative transcription factor bHLH041 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_008450872.1	1.4e-199	74.91	PREDICTED: putative transcription factor bHLH041 isoform X1 [Cucumis melo]	[more]
XP_022987667.1	5.7e-198	75.04	putative transcription factor bHLH041 isoform X2 [Cucurbita maxima]	[more]

BLAST of Lsi06G002900 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G56960.1	5.0e-35	31.55	basic helix-loop-helix (bHLH) DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 381..415
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 178..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..212
None	No IPR available	PANTHER	PTHR46665:SF1	TRANSCRIPTION FACTOR BHLH041-RELATED	coord: 1..367 coord: 368..517
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 321..410 e-value: 2.4E-5 score: 26.4
IPR044658	Transcription factor bHLH92/bHLH041-like	PANTHER	PTHR46665	TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED	coord: 1..367 coord: 368..517

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G002900.1	Lsi06G002900.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity