Lsi06G001940 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G001940
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	kinesin-like protein KIFC3
Location	chr06: 2134818 .. 2135402 (-)
RNA-Seq Expression	Lsi06G001940
Synteny	Lsi06G001940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAAGCTCAAGAGGAATGCCAAAAAGTCAAGAACCAAATACAGAAGGCCGAGTTTCTATTGAGCGAAAACAAGAAACTATTTTCTTCCGATCGTCATCCATGTGTCGAAACTCCCGAGATGAACCATGTAGTGCCCAGGGAAGATCGGAAGGAAGTCACTGTCACTCCAAGAAAATCTAAAGTTCCAAGTAAAACTATCATTTCCAATTCTTTGCCTCGTTTCATGACTTCTACAATGGCGAGTCGCCAAAGGCAAAGTGCTGCAGAAAACAAAGTAGTAGTGATGGGGAAAGCGAAAAGTTTGAGATTTGGAGCAAGAAGCTCTGTCCAATTCTCGAGCTCCCAATCCATCAGTTACTCAGATTTTCGTATAAGAGCAAGCCTACAATTATCAAATAAGAAATCACGGTATGTAGAACCCGACACTCTCTCAACCGAAGCTCCTCAAGTCAATGGCTCAGAACTGAAAAAAGATCCATTGCCATTGCCATTGCCACAAAGCAAATTGGTAACTTCATCTGATTCGAACTTGAGAGTTACGCTTTCTCGTCACCGGAGAAGGATGTCTGATCTAATCTAA

mRNA sequence

ATGAAGGAAGCTCAAGAGGAATGCCAAAAAGTCAAGAACCAAATACAGAAGGCCGAGTTTCTATTGAGCGAAAACAAGAAACTATTTTCTTCCGATCGTCATCCATGTGTCGAAACTCCCGAGATGAACCATGTAGTGCCCAGGGAAGATCGGAAGGAAGTCACTGTCACTCCAAGAAAATCTAAAGTTCCAAGTAAAACTATCATTTCCAATTCTTTGCCTCGTTTCATGACTTCTACAATGGCGAGTCGCCAAAGGCAAAGTGCTGCAGAAAACAAAGTAGTAGTGATGGGGAAAGCGAAAAGTTTGAGATTTGGAGCAAGAAGCTCTGTCCAATTCTCGAGCTCCCAATCCATCAGTTACTCAGATTTTCGTATAAGAGCAAGCCTACAATTATCAAATAAGAAATCACGGTATGTAGAACCCGACACTCTCTCAACCGAAGCTCCTCAAGTCAATGGCTCAGAACTGAAAAAAGATCCATTGCCATTGCCATTGCCACAAAGCAAATTGGTAACTTCATCTGATTCGAACTTGAGAGTTACGCTTTCTCGTCACCGGAGAAGGATGTCTGATCTAATCTAA

Coding sequence (CDS)

ATGAAGGAAGCTCAAGAGGAATGCCAAAAAGTCAAGAACCAAATACAGAAGGCCGAGTTTCTATTGAGCGAAAACAAGAAACTATTTTCTTCCGATCGTCATCCATGTGTCGAAACTCCCGAGATGAACCATGTAGTGCCCAGGGAAGATCGGAAGGAAGTCACTGTCACTCCAAGAAAATCTAAAGTTCCAAGTAAAACTATCATTTCCAATTCTTTGCCTCGTTTCATGACTTCTACAATGGCGAGTCGCCAAAGGCAAAGTGCTGCAGAAAACAAAGTAGTAGTGATGGGGAAAGCGAAAAGTTTGAGATTTGGAGCAAGAAGCTCTGTCCAATTCTCGAGCTCCCAATCCATCAGTTACTCAGATTTTCGTATAAGAGCAAGCCTACAATTATCAAATAAGAAATCACGGTATGTAGAACCCGACACTCTCTCAACCGAAGCTCCTCAAGTCAATGGCTCAGAACTGAAAAAAGATCCATTGCCATTGCCATTGCCACAAAGCAAATTGGTAACTTCATCTGATTCGAACTTGAGAGTTACGCTTTCTCGTCACCGGAGAAGGATGTCTGATCTAATCTAA

Protein sequence

MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRKSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSISYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLRVTLSRHRRRMSDLI

Homology

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BLAST of Lsi06G001940 vs. ExPASy Swiss-Prot
Match: Q8W0Y9 (Kinesin-like protein KIN-14U OS=Arabidopsis thaliana OX=3702 GN=KIN14U PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.7e-20
Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           M+E QE C+K+K ++Q+ E L++E+KKLF       +E  E   + P +  K+   TP  
Sbjct: 429 MEETQEGCKKIKARLQEVECLVNEHKKLFWITNDKYLEDIEKKAISPLDHLKDTDATPIS 488

Query: 61  S-KVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSI 120
           S K+      S  +PRFMTST+ASRQRQ+ +E +  +  KA+S+R  A++  QFS+SQS+
Sbjct: 489 SDKLVKIRKSSGFVPRFMTSTVASRQRQTMSEKE--INAKAQSIRSVAKNLTQFSTSQSL 548

Query: 121 SYSDFRIRASLQLSNKKSRYVEPDT-LSTEAPQ---VNGSELKKDPLPLPLPQSKLVTSS 180
           S SD R +A L+ S  K      ++    E P+    + S  +K+      P+SK+VTSS
Sbjct: 549 SLSDSRSKALLRRSYTKPLQAAANSGTPPETPKRHIKDNSLQRKNMNDTSSPRSKMVTSS 608

Query: 181 DSNLRVTLSRHRRRMSDL 194
           D N+R  L  H+RRMS L
Sbjct: 609 DPNVRAKLCHHKRRMSSL 624

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BLAST of Lsi06G001940 vs. ExPASy Swiss-Prot
Match: B9G2X9 (Kinesin-like protein KIN-14O OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14O PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 4.9e-04
Identity = 54/194 (27.84%), Postives = 85/194 (43.81%), Query Frame = 0


Query: 3   EAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVE---TPEMNHVVPREDRKEVTVTPR 62
           +A++E + +  QI++AE  L E KKL SS      +   +P    VV      +   +P+
Sbjct: 414 DAEQELKDLNEQIKRAETSLEERKKLSSSACQALSDEKGSPRSTLVV--VGHIDSAESPQ 473

Query: 63  KSKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSI 122
            ++         S+P FM+ T+ SRQR S+A +        KS+      + + S S S 
Sbjct: 474 ATEKTKSRASHGSVPHFMSPTVCSRQRHSSASHSATKTRLTKSV--NRYPAAELSGSHSF 533

Query: 123 SYSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNL 182
           SYS  +  A  +     S   +   L  ++ Q+N S    D      P+ +    S    
Sbjct: 534 SYSSCKNAAKARSVAFSSSMPKMKCLPLKSDQINMSNNSIDSTAASAPRRRESFISRPAQ 593

Query: 183 RVTLSRHRRRMSDL 194
           R  L +HRRRMS L
Sbjct: 594 RAPLHQHRRRMSSL 603

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BLAST of Lsi06G001940 vs. ExPASy TrEMBL
Match: A0A0A0LZ68 (Kinesin motor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G573710 PE=3 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 1.1e-83
Identity = 178/198 (89.90%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKLFSSD HP VETPE NH+VP EDRKEVT TPRK
Sbjct: 435 MKEAQEECQKVKNQIQKAEFLLCENKKLFSSDHHPRVETPEANHIVPVEDRKEVTRTPRK 494

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSK IISNSLPRFMTSTMASRQRQ+AAENK +VMG+ KSLRFGARSSVQFSSSQSIS
Sbjct: 495 SKVPSKAIISNSLPRFMTSTMASRQRQTAAENK-IVMGRVKSLRFGARSSVQFSSSQSIS 554

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDP----LPLPLPQSKLVTSSD 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDP    LPLPLPQSK+VTSSD
Sbjct: 555 YSDFRIRASLQLSNKKSRYVEPDTLSTETPQVNGSEPKKDPLPLSLPLPLPQSKMVTSSD 614

Query: 181 SNLRVTLSRHRRRMSDLI 195
           SNLRVTLSRHRRRMSDLI
Sbjct: 615 SNLRVTLSRHRRRMSDLI 631

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BLAST of Lsi06G001940 vs. ExPASy TrEMBL
Match: A0A5D3CF59 (Kinesin-like protein KIFC3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003200 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 176/196 (89.80%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRK
Sbjct: 437 MKEAQEECQKVKNQIQKAEFLLCENKKLLSSDHHPHVNTPEANHIVPVEDRKEVTSTPRK 496

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ KSLRFGARSSVQFSSSQSIS
Sbjct: 497 SKVPSKTIVSNSLPRFMTSTMASRQRQSAAENKIVT-GRVKSLRFGARSSVQFSSSQSIS 556

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSN 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSN
Sbjct: 557 YSDFRIRASLQLSNKKSRYVEPDTLSTEPPQVNGSEPKKDPLPLSLPLPQSKLVTSSDSN 616

Query: 181 LRVTLSRHRRRMSDLI 195
           LRV LSRHRRRMSDLI
Sbjct: 617 LRVMLSRHRRRMSDLI 631

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BLAST of Lsi06G001940 vs. ExPASy TrEMBL
Match: A0A1S3BQZ1 (kinesin-like protein KIFC3 OS=Cucumis melo OX=3656 GN=LOC103492236 PE=3 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.6e-82
Identity = 176/196 (89.80%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRK
Sbjct: 435 MKEAQEECQKVKNQIQKAEFLLCENKKLLSSDHHPHVNTPEANHIVPVEDRKEVTSTPRK 494

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ KSLRFGARSSVQFSSSQSIS
Sbjct: 495 SKVPSKTIVSNSLPRFMTSTMASRQRQSAAENKIVT-GRVKSLRFGARSSVQFSSSQSIS 554

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSN 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSN
Sbjct: 555 YSDFRIRASLQLSNKKSRYVEPDTLSTEPPQVNGSEPKKDPLPLSLPLPQSKLVTSSDSN 614

Query: 181 LRVTLSRHRRRMSDLI 195
           LRV LSRHRRRMSDLI
Sbjct: 615 LRVMLSRHRRRMSDLI 629

[Close]

BLAST of Lsi06G001940 vs. ExPASy TrEMBL
Match: A0A6J1DMD1 (kinesin-like protein KIN-14U OS=Momordica charantia OX=3673 GN=LOC111022544 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.7e-82
Identity = 170/194 (87.63%), Postives = 179/194 (92.27%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLLSENKKLFS+D HPC+ETPE N + P EDRKEV +TP+K
Sbjct: 445 MKEAQEECQKVKNQIQKAEFLLSENKKLFSTDHHPCIETPETNDIAPEEDRKEVIITPKK 504

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SK PSKTIIS+SLPRFMTSTMASRQRQSAAENK VVMG+AKSLRFG RSSVQFSSSQSIS
Sbjct: 505 SKAPSKTIISSSLPRFMTSTMASRQRQSAAENK-VVMGRAKSLRFGTRSSVQFSSSQSIS 564

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLR 180
           YSDFRIRASLQ+SNKKSRY E DTLSTE P+VNG ELKKDPLPLPLPQSKLVTSSD N R
Sbjct: 565 YSDFRIRASLQISNKKSRYAESDTLSTENPKVNGPELKKDPLPLPLPQSKLVTSSDPNSR 624

Query: 181 VTLSRHRRRMSDLI 195
           VTLSRHRRRMSDLI
Sbjct: 625 VTLSRHRRRMSDLI 637

[Close]

BLAST of Lsi06G001940 vs. ExPASy TrEMBL
Match: A0A6J1JII2 (kinesin-like protein KIN-14U OS=Cucurbita maxima OX=3661 GN=LOC111485407 PE=3 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.9e-76
Identity = 161/194 (82.99%), Postives = 174/194 (89.69%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQK+KNQIQKAEFLLSENKK FS++ HPCVET + NH+   ED+KEV VTPRK
Sbjct: 424 MKEAQEECQKLKNQIQKAEFLLSENKKRFSTEHHPCVETSKTNHIALGEDQKEVIVTPRK 483

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
            KV SK+I+SNSLPRFMTSTMASRQRQS+AENKV   G+AKS RFG RSSVQFSSSQSIS
Sbjct: 484 PKVSSKSIVSNSLPRFMTSTMASRQRQSSAENKVAT-GRAKSSRFGTRSSVQFSSSQSIS 543

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLR 180
           YSDFRIRASL +SNKKSRYVEPDTLSTEAPQVN  ELKKD LPLP PQSKLVTSSDSNL+
Sbjct: 544 YSDFRIRASLHISNKKSRYVEPDTLSTEAPQVNVPELKKDSLPLPWPQSKLVTSSDSNLK 603

Query: 181 VTLSRHRRRMSDLI 195
           VT+SRHRRRMSDLI
Sbjct: 604 VTVSRHRRRMSDLI 616

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: QWT43336.1 (kinesin-like protein KIN14G [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 331.6 bits (849), Expect = 4.4e-87
Identity = 181/194 (93.30%), Postives = 188/194 (96.91%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLLSE+KKLFS+D HP VETPEMNHVVP EDRKEVTVTPRK
Sbjct: 440 MKEAQEECQKVKNQIQKAEFLLSEHKKLFSTDHHPHVETPEMNHVVPGEDRKEVTVTPRK 499

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSKTIISNSLPRFMTSTMASRQRQSAAENK VVMG+AKSLRFGARSSVQFSSSQS+S
Sbjct: 500 SKVPSKTIISNSLPRFMTSTMASRQRQSAAENK-VVMGRAKSLRFGARSSVQFSSSQSMS 559

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLR 180
           YSDFRIRASLQ+SNKKSRYVEPD+LSTE PQVNGSELKKDPLPLPLPQSK+V SSDSNLR
Sbjct: 560 YSDFRIRASLQISNKKSRYVEPDSLSTETPQVNGSELKKDPLPLPLPQSKMVISSDSNLR 619

Query: 181 VTLSRHRRRMSDLI 195
           VTLSRHRRRMSDLI
Sbjct: 620 VTLSRHRRRMSDLI 632

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: XP_004135657.2 (kinesin-like protein KIN-14U [Cucumis sativus] >KGN66152.1 hypothetical protein Csa_007272 [Cucumis sativus])

HSP 1 Score: 319.3 bits (817), Expect = 2.3e-83
Identity = 178/198 (89.90%), Postives = 183/198 (92.42%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKLFSSD HP VETPE NH+VP EDRKEVT TPRK
Sbjct: 435 MKEAQEECQKVKNQIQKAEFLLCENKKLFSSDHHPRVETPEANHIVPVEDRKEVTRTPRK 494

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSK IISNSLPRFMTSTMASRQRQ+AAENK +VMG+ KSLRFGARSSVQFSSSQSIS
Sbjct: 495 SKVPSKAIISNSLPRFMTSTMASRQRQTAAENK-IVMGRVKSLRFGARSSVQFSSSQSIS 554

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDP----LPLPLPQSKLVTSSD 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDP    LPLPLPQSK+VTSSD
Sbjct: 555 YSDFRIRASLQLSNKKSRYVEPDTLSTETPQVNGSEPKKDPLPLSLPLPLPQSKMVTSSD 614

Query: 181 SNLRVTLSRHRRRMSDLI 195
           SNLRVTLSRHRRRMSDLI
Sbjct: 615 SNLRVTLSRHRRRMSDLI 631

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: XP_038879373.1 (kinesin-like protein KIN-14U [Benincasa hispida])

HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82
Identity = 174/194 (89.69%), Postives = 181/194 (93.30%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQ ECQKVKNQIQKAEFLLSENKKL S+D HPCVETP+M H+ P EDRKEV VTPRK
Sbjct: 452 MKEAQGECQKVKNQIQKAEFLLSENKKLLSTDHHPCVETPKMKHIAPGEDRKEVIVTPRK 511

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SK+PSK+IISNSLPRFMTSTMASRQRQSAAENK VVMG+AKSLRFGARSSVQFSSSQS+S
Sbjct: 512 SKIPSKSIISNSLPRFMTSTMASRQRQSAAENK-VVMGRAKSLRFGARSSVQFSSSQSMS 571

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLPLPLPQSKLVTSSDSNLR 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVN SE KKD LPLPLPQSKLV SSDSNLR
Sbjct: 572 YSDFRIRASLQLSNKKSRYVEPDTLSTETPQVNVSEPKKDTLPLPLPQSKLVISSDSNLR 631

Query: 181 VTLSRHRRRMSDLI 195
           VTLSRHRRRMSDLI
Sbjct: 632 VTLSRHRRRMSDLI 644

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: TYK10175.1 (kinesin-like protein KIFC3 [Cucumis melo var. makuwa])

HSP 1 Score: 315.5 bits (807), Expect = 3.3e-82
Identity = 176/196 (89.80%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRK
Sbjct: 437 MKEAQEECQKVKNQIQKAEFLLCENKKLLSSDHHPHVNTPEANHIVPVEDRKEVTSTPRK 496

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ KSLRFGARSSVQFSSSQSIS
Sbjct: 497 SKVPSKTIVSNSLPRFMTSTMASRQRQSAAENKIVT-GRVKSLRFGARSSVQFSSSQSIS 556

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSN 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSN
Sbjct: 557 YSDFRIRASLQLSNKKSRYVEPDTLSTEPPQVNGSEPKKDPLPLSLPLPQSKLVTSSDSN 616

Query: 181 LRVTLSRHRRRMSDLI 195
           LRV LSRHRRRMSDLI
Sbjct: 617 LRVMLSRHRRRMSDLI 631

[Close]

BLAST of Lsi06G001940 vs. NCBI nr
Match: XP_008450750.1 (PREDICTED: kinesin-like protein KIFC3 [Cucumis melo])

HSP 1 Score: 315.5 bits (807), Expect = 3.3e-82
Identity = 176/196 (89.80%), Postives = 180/196 (91.84%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           MKEAQEECQKVKNQIQKAEFLL ENKKL SSD HP V TPE NH+VP EDRKEVT TPRK
Sbjct: 435 MKEAQEECQKVKNQIQKAEFLLCENKKLLSSDHHPHVNTPEANHIVPVEDRKEVTSTPRK 494

Query: 61  SKVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSIS 120
           SKVPSKTI+SNSLPRFMTSTMASRQRQSAAENK+V  G+ KSLRFGARSSVQFSSSQSIS
Sbjct: 495 SKVPSKTIVSNSLPRFMTSTMASRQRQSAAENKIVT-GRVKSLRFGARSSVQFSSSQSIS 554

Query: 121 YSDFRIRASLQLSNKKSRYVEPDTLSTEAPQVNGSELKKDPLP--LPLPQSKLVTSSDSN 180
           YSDFRIRASLQLSNKKSRYVEPDTLSTE PQVNGSE KKDPLP  LPLPQSKLVTSSDSN
Sbjct: 555 YSDFRIRASLQLSNKKSRYVEPDTLSTEPPQVNGSEPKKDPLPLSLPLPQSKLVTSSDSN 614

Query: 181 LRVTLSRHRRRMSDLI 195
           LRV LSRHRRRMSDLI
Sbjct: 615 LRVMLSRHRRRMSDLI 629

[Close]

BLAST of Lsi06G001940 vs. TAIR 10
Match: AT5G27950.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein )

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-21
Identity = 78/198 (39.39%), Postives = 116/198 (58.59%), Query Frame = 0


Query: 1   MKEAQEECQKVKNQIQKAEFLLSENKKLFSSDRHPCVETPEMNHVVPREDRKEVTVTPRK 60
           M+E QE C+K+K ++Q+ E L++E+KKLF       +E  E   + P +  K+   TP  
Sbjct: 429 MEETQEGCKKIKARLQEVECLVNEHKKLFWITNDKYLEDIEKKAISPLDHLKDTDATPIS 488

Query: 61  S-KVPSKTIISNSLPRFMTSTMASRQRQSAAENKVVVMGKAKSLRFGARSSVQFSSSQSI 120
           S K+      S  +PRFMTST+ASRQRQ+ +E +  +  KA+S+R  A++  QFS+SQS+
Sbjct: 489 SDKLVKIRKSSGFVPRFMTSTVASRQRQTMSEKE--INAKAQSIRSVAKNLTQFSTSQSL 548

Query: 121 SYSDFRIRASLQLSNKKSRYVEPDT-LSTEAPQ---VNGSELKKDPLPLPLPQSKLVTSS 180
           S SD R +A L+ S  K      ++    E P+    + S  +K+      P+SK+VTSS
Sbjct: 549 SLSDSRSKALLRRSYTKPLQAAANSGTPPETPKRHIKDNSLQRKNMNDTSSPRSKMVTSS 608

Query: 181 DSNLRVTLSRHRRRMSDL 194
           D N+R  L  H+RRMS L
Sbjct: 609 DPNVRAKLCHHKRRMSSL 624

The following BLAST results are available for this feature:

BLAST of Lsi06G001940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W0Y9	1.7e-20	39.39	Kinesin-like protein KIN-14U OS=Arabidopsis thaliana OX=3702 GN=KIN14U PE=2 SV=1	[more]
B9G2X9	4.9e-04	27.84	Kinesin-like protein KIN-14O OS=Oryza sativa subsp. japonica OX=39947 GN=KIN14O ...	[more]

BLAST of Lsi06G001940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZ68	1.1e-83	89.90	Kinesin motor domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5737...	[more]
A0A5D3CF59	1.6e-82	89.80	Kinesin-like protein KIFC3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BQZ1	1.6e-82	89.80	kinesin-like protein KIFC3 OS=Cucumis melo OX=3656 GN=LOC103492236 PE=3 SV=1	[more]
A0A6J1DMD1	2.7e-82	87.63	kinesin-like protein KIN-14U OS=Momordica charantia OX=3673 GN=LOC111022544 PE=3...	[more]
A0A6J1JII2	4.9e-76	82.99	kinesin-like protein KIN-14U OS=Cucurbita maxima OX=3661 GN=LOC111485407 PE=3 SV...	[more]

BLAST of Lsi06G001940 vs. NCBI nr


Match Name	E-value	Identity	Description
QWT43336.1	4.4e-87	93.30	kinesin-like protein KIN14G [Citrullus lanatus subsp. vulgaris]	[more]
XP_004135657.2	2.3e-83	89.90	kinesin-like protein KIN-14U [Cucumis sativus] >KGN66152.1 hypothetical protein ...	[more]
XP_038879373.1	1.1e-82	89.69	kinesin-like protein KIN-14U [Benincasa hispida]	[more]
TYK10175.1	3.3e-82	89.80	kinesin-like protein KIFC3 [Cucumis melo var. makuwa]	[more]
XP_008450750.1	3.3e-82	89.80	PREDICTED: kinesin-like protein KIFC3 [Cucumis melo]	[more]

BLAST of Lsi06G001940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G27950.1	1.2e-21	39.39	P-loop containing nucleoside triphosphate hydrolases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..183
None	No IPR available	PANTHER	PTHR24115:SF835	KINESIN-LIKE PROTEIN KIN-14U	coord: 1..194
IPR027640	Kinesin-like protein	PANTHER	PTHR24115	KINESIN-RELATED	coord: 1..194

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G001940.1	Lsi06G001940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030705	cytoskeleton-dependent intracellular transport
biological_process	GO:0007018	microtubule-based movement
cellular_component	GO:0005871	kinesin complex
cellular_component	GO:0005874	microtubule
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008017	microtubule binding
molecular_function	GO:0008574	plus-end-directed microtubule motor activity