Lsi06G001480 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G001480
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ribosome biogenesis protein BRX1-like
Location	chr06: 1550688 .. 1557046 (+)
RNA-Seq Expression	Lsi06G001480
Synteny	Lsi06G001480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATGATGCAATTTTGAGCATAATTTTTCAACGAGTCCTATTGAATTGGCAATTTGTAAATTGGTAGCTCCAAAATTTGGTAAATAGGGGGGAGAGTGGTGGGTTTTATCGTCAAATTAGGGTTTTATCGTCACTCTGTGCCGCTTCTCTTTCTCTGTCTGATCAGCACCTTCGTCCTCTTCATCCAGCCACCCGCAAGCAGGCGCCGCCGCTTCATTGCCGATCATCTCCGCCAGTCGACGTTGCTGGGAAGCTTTTGAGTTCTCTTCGTTTCTCTTTTCCTCTCACTCTCGGTTTTTCTTCTCCTTATAGCACCACCGTTCACCGCCCTCAGTGGACGCCGCTCGCCGTTGGTCGTGATCGCCACTGCCGCGGATTCGTACAGCGGACGGGTAAGAATAATCCGTTCAGTTTAAATCACATTACCCATAGCTTGTAGAGTTCAAATGTGTAAGTTCGAACCTATTCGAACACAAACCAGCACGAAATTAACCTCTTTCAGCATAAATTAGTGGGTAAGGACTCATTTTATTAATTTCCAAACTCGTTTTAAGTGCTGTTAGTTAAATTTTGGCCTGTGAAATTCTTCCTTTTGCGGTTTCGAGCTAATTCTGGTTGAATCGACACAGAAGCTTATGGCGTTAATATGGCCAAGTAATAGCATTTAAATTGAGTTTCAAAGTAATTTTGGTGTAACTGTTTTAAGCTTGAAACGCCTTTGAGATTTGTTGTTTGTCTTGCATCATATGATTATATTACGAGGCATCAACTGATTAACTCATGGGACCTCATGCATATGTGCATACGCATAGTCGTTATATTTAGAAGTTATGAGTTCGGAGACTGGAAGATTGCTTCACTTCCCCTTTCAGTGAAGCATATGTTTAATAGAGAGGAAAGCCTTTCGAGTGTGTCGTGTCTGACACAGACACTTCATAAAAAATGAAGTGTATGTGCTTCCTAGCCTTTCACAGGAATGGCTTGGCATTGGTTCCCTTTAGAAACTTAACCCTTCATACCAAATGGTGTTGGAGATTTGCTTAGGAGGGTAAGGCTGGTGGTTAGTATTTATGGGGAAGAACCTCTTGGTTGGAAAGCTACTTTACCTAAAGGGAGCTCATATAATAGGCCCTGGTTTGATATTTGCTAGGATAGTCCCTTTGTTTGAATGATTCTCTAGTTTCATAATTGGTAATGGACAATAAGCTTCTGGAATGATGTATGGTTTGGCTGTTCTCCTCTAAAAGATAATTTTCCAGATATGTGGAGCTTTGGTGGCTGAATGTTGGGATAATGACCTAGAGACTTGGAACCTTAATTTTAGAGGAGGCATTTTTAATAGAAAGGTCAAGAACTGATCGAGTTGACCATGAAACTAGAGGGATTTCGTTTAGGGGCATCCGAGGATAACTTATGTTGGTCTCTTGAACCTTCGGGCTGTTTTTTTTTTTTTACCAAATCCCTCTTCTATAAGCTTGTTAGTGTGAGACATACTCTTCAATGTACGGTTGCTAACCAGATTTGGGGTTCCAGAGTTCCCAATTTTTTTCGTAGGCTCCAAAGAAGAAATCCCTCTCTTGTTCTTGGCCCTTTAGTCTGTCTTTTATGTTGGTGCGTGGAGTTCTTAGATCACATTTTCTTGCATTGTCCCTTTGCAAAACGTGGGCTGGCTGTTTTTTATATTAGAGTTTTCCTTCCCAACAAGGTGGATGATTGGCTGTTAGAATGTGTATTAGAAGTTAGGTCATTTCACTCTCACTCTTTTGTCTTCACCTTTTACAGATTTCTCTAACCTCCATTGCTTAATTTAGGTCCAGTATTTCTAAAGAGGGTGATATTCTCAATGGCAAAGAAGAGGAAGCATAGTGAGATTTTGCCGACAGTATCGGTTAAGAAGGATGACAGCGCTCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAGTGGCAAAAGAGTGTGAACCTGGTTGTGATCATGCTGTTTTTCGGAATAAAGAAAAGGTTCTCATCACTTGTTCCCGCCGAATCAATTTTAGGTATGAAATATAGTTGAAACAAGTTGGTGTAGCTTTTTGTAAAATCTATTAATAGGTATATACAGGGTCAGGTAGTTTGTGATGTAAATTTTCACTCACTAACCAAAAGTTCTTTTTTTTAATAGACCAAAAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAATTAGAATTTCTGGCAGTTTTATTAACATTTGTGATTGATTAGGTATCGGCATTTGATGTTGAATATTGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACTCTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGGTTAGAACTTTTGCTTCGCACTCTGTCCATGTCTAAACTTGGAATTCAATTCAAAATCTGGAATTTGTAAGGTACAATATTTTTTTAATTTATTTAGGACTATAATTTTTTGGTTTTTGTTGTGGTATGAGGATGTTTTAAGTATACTTTTCTTTTTCATTTTATTATTTTCCTACATGCCTTTTCATCGTGTTTGTACATTGCGATCACATGGCTTATTTTTCCACTTGCTGATATTTTTCTCTCTAATTCCAGTGCAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGGTAATTTTAACTTGTATTCAAATTTTATTACTGGGTGATTGAGATTATGTTGGACTTCTTTATTAAATGCAGTTTTCTTACTTTTCCATTTTTGCTTTCAGTGCATACAATGGAAGAATTGAAGCTTACCGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGGTATCAATGGCAAAGTTTTTTCTTTGGCAATTCATTGTTGAAACTATTTTCCATTCTTACTCGTGGATCAGTGAATGTATCAAATATCAGTTTCCTTGTCTTTCTTCTTTAAATACTCTTTTTGCTCAGTCGTTTGTTCCTTCAATCCAAAGCGAACATGGTATTAAATTAATAAAATATTGTTAGCACGACTGTGGTCGAATTATCTTTCACTTTTCTTGATGATAGTAAGTTTTTATGAAAAAAAATAAAAAATATTTGTGAATGCATTTCTTTCATGTAATATACTACGCATAAGAATATGGATTAGTGAATACTTGTGCCTGATTTCACATATGCTGGTGCCTCACCACTATCATTCTTTTTTCATGCTGCCTTTATTTATTTCCTATTTAGGGTGGCAATATTAGTTTGATTTGCTGCATATTACTATGTTGTGAAAAGTATGTAGATCTTAGCTGCATCTCCAAATAATGGCTTTTTCGTTTACAAATCCTATGAAGTCTCGTTTTAATGTGACATAATTTTAGCGCAACAACATGTTTTCTCCTCAGATTTTTGGAACTCCGAAGGAGCATCGACATTCTAAACCATATCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATCTGGTTCCGGAATTACCAGGTATGCTTTATTTATTTTCTACTTGTTACAGAATTTAATGCTAATCGTGGATGGCATCTAAAAGCACAACCTCCACTTGACACCCAAATAATGCACTGGATGTAGTCTTTCTTTTAAATGTTTGCTCAACGCTTTTTCCAAGAAGTGGCACATGAAATCAGAAAAATATGTTCTACTTTTTGTTAGGCAAAGACATTGGGAAGATTTTTAGGAGTATTGTTAGTATAAATGTCAAATATTTGTTATGATATTGGAAGTATATTAGTCATTAGCTAAGGGTGTTTTAAATGGATGGTTGTTCAGAGAAAGATTAAGATAAGAGCTCGGATGGGTACAAGTAAAGAAACAATCCTCTAACTTCAGATTTAATGACCAAGGTTTCATTCAGAGAAAAAATAAACAATGCTCAGTTTTTAGAGAAAATGACCAAAGCTTCATTCATATAACAAACAATAGGCTTCATTCATATAACAAACAATGGTGGTGAAGTTACTTGACAGGAGATTGCCATTTTATATATGACAAATGCTGGAACCCTCAACTTTTTCGGGGCTGGATAGTAATGAGAGGGTTTACCACTTTATTGAAACATTGTGGGCTGGAGATGATGCATTAAAAAAATTGGAAGAAATGTGATTTGGGTGAATATAAATGCCTTACAATCTCTTCAGCAAAATATGCAAGAACTTTATTCCTTGCTGGATCAATTACATCTTCATTTTTTTTTTCTTTTTTTGGTTTCAAAACAAGAAGTCGGTATCTGAAGTTTGGGTGCAATTTTAAAGCTGTAGCATGAGTAGGAAGTACGGGGGTTCGTTTAACCATCAGCACCCCACCTGAGGGACAATGTGTGCTTTTTGGTGAAGTAAGTTAAAGAATATATGGATAAATGTCAAAAATATCGTCATTAGGATATAAGGGGTACAATTGTCATTAGGTAAGGAATTTGGCATGGTAAAAAATCAATAGGTTGGAGGGGTTTGAGGTTAAGCAGATTTTGGGGAATAGTTTTTGGGGGAGTCCAAGTTTCTCTAGGTAGTTGGGATCTTGTCATTTTTCTTTCTTACGTTCTTGACTTCCATTATTTTTTAGTTCACCGTAGACCATTTTCATATAATTGATCGTTATCCTTTAACTTGCATGTTCACTTTTTGCACCAACTGTTGGTACATTTGTTCTTGTTTGGGGTTTGTGTGGGTGTGATCTATTCTCCCACTGACCATTATTTAATGATATGGTGTTTGTCTTCTTTGTTTGGTGTGATTAGATAGCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTATTAAAATTCCACTTCCTATTCAGTTTATAAATGAGTTTTCACAATTTTCTTGTTGGACTTCAAAGATTTGTATTTTACAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGAAGTTTTGGAGGCCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGGTTAGATGATCCAACTTTTTGAACATTTGAGGATTACACTTCTTCGCACTTATCTCTTTTAAACTCGGTTTACAGAATATCTGAGAAACATATGCATTAGTTATCAAGAAGAGAACCACATACAAGATGCATTAGCTATGTTTTCCCGGTTTCTCAAGTTCATATTTTACAAGAGACTAAAAGTATCGAAATTACAGAAAAAATAATGTCGTTGCAAAGGCCAAATATTCATTATCCTTTTCAATTCAAGTTTCAGTAGGATACCTCCTAACAAGAACTCATAAGAACAATAAACAACCCTTAAGGATAGAAATATATATTGCATATATTACTGTAAAAACTACAATATAACATAGCCTTTCGAGAGGGCTACTCTCTGCCAAAATTTCCAAAGGAAATATCAAAAAAAATTTCACACCTTGGTCCTAGCCCACTCCTCTACTTATAACTAAAAGCTCTAACAAACTTACTAACTGTTTACTAATATGTTCCTTTTAATAATCATGCTAATGTTCTACTAATAATTTTGCTATATCTCTAACTAGAGCTGTCATAAATTCTTTGAGATTCCCTTTTGTAACTATTCTCACTTTATTTCAAAAAAAAAAAAAAAAAAAACTATAGTCTCACTTATCTTATGGCCAACCAGAAGTGTCTTTTTGTAATCCATTGGATAGGATTTCATATTTTATAAATTTTGTCAATGTTTCTCCCTTTTCCTAAAAAAAGGAAAGATAAAACCCTCAAATGTGCCCATAGACTTGCTGATGTTCTTCATGTCTCTTCCTAGATTCGAGCATTGGAGAAGAAGCAGAAGGCTGGGAAATACTCGAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCAAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAGTATTTCAATTAATTTAATTTTATCTAAGACTTAGAATATAAATTCCTTGCCTCCAGTGAAATGAGATTTTGTTCTATAATAGTAACTGGAGTGCAAATTTTGTCCTTGTTATTTATTTAAACCTTGAGGTATGTTTCTCTATTTTCAATGTATTTCTTAGTTAAATACTTGAGTTCAGATATGATTTTACAAGTTCAAAGAGCATCTCATACTTTTGACTTTATGTTACCCGGAATAGTTCCAAAAGAAAAGAAAAGAAAAGGCGTGTAAGTTGAGAATTTTTTTTTTAAAAAAATTAATTTTAT

mRNA sequence

GATGATGCAATTTTGAGCATAATTTTTCAACGAGTCCTATTGAATTGGCAATTTGTAAATTGGTAGCTCCAAAATTTGGTAAATAGGGGGGAGAGTGGTGGGTTTTATCGTCAAATTAGGGTTTTATCGTCACTCTGTGCCGCTTCTCTTTCTCTGTCTGATCAGCACCTTCGTCCTCTTCATCCAGCCACCCGCAAGCAGGCGCCGCCGCTTCATTGCCGATCATCTCCGCCAGTCGACGTTGCTGGGAAGCTTTTGAGTTCTCTTCGTTTCTCTTTTCCTCTCACTCTCGGTTTTTCTTCTCCTTATAGCACCACCGTTCACCGCCCTCAGTGGACGCCGCTCGCCGTTGGTCGTGATCGCCACTGCCGCGGATTCGTACAGCGGACGGGTCCAGTATTTCTAAAGAGGGTGATATTCTCAATGGCAAAGAAGAGGAAGCATAGTGAGATTTTGCCGACAGTATCGGTTAAGAAGGATGACAGCGCTCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAGTGGCAAAAGAGTGTGAACCTGGTTGTGATCATGCTGTTTTTCGGAATAAAGAAAAGGTTCTCATCACTTGTTCCCGCCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATTGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACTCTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGTGCAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAGCTTACCGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGCGCAACAACATGTTTTCTCCTCAGATTTTTGGAACTCCGAAGGAGCATCGACATTCTAAACCATATCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATCTGGTTCCGGAATTACCAGATAGCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGAAGTTTTGGAGGCCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCATTGGAGAAGAAGCAGAAGGCTGGGAAATACTCGAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCAAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAGTATTTCAATTAATTTAATTTTATCTAAGACTTAGAATATAAATTCCTTGCCTCCAGTGAAATGAGATTTTGTTCTATAATAGTAACTGGAGTGCAAATTTTGTCCTTGTTATTTATTTAAACCTTGAGGTATGTTTCTCTATTTTCAATGTATTTCTTAGTTAAATACTTGAGTTCAGATATGATTTTACAAGTTCAAAGAGCATCTCATACTTTTGACTTTATGTTACCCGGAATAGTTCCAAAAGAAAAGAAAAGAAAAGGCGTGTAAGTTGAGAATTTTTTTTTTAAAAAAATTAATTTTAT

Coding sequence (CDS)

ATGGCAAAGAAGAGGAAGCATAGTGAGATTTTGCCGACAGTATCGGTTAAGAAGGATGACAGCGCTCCTGAGAGACCCAAGCGGACGCTCATGGGTTGGAAAGACAAAGAAGTGGCAAAAGAGTGTGAACCTGGTTGTGATCATGCTGTTTTTCGGAATAAAGAAAAGGTTCTCATCACTTGTTCCCGCCGAATCAATTTTAGGTATCGGCATTTGATGTTGAATATTGTATCACTTTTGCCACATTGTAAGAAGGATAACAAGGTGGAGTCGAGGTCCAGCAAGGGTGCAACTCTGAATGAGCTGGTTGAGCTCAAGGGTTGTTCTTCCAGCCTATTTTTTGAGTGCAGAAAACATAAAGATCTCTATTTATGGATGGCAAAGTGCCCTAGTGGGCCATCTGTGAAGTTTTTAGTTAATGCCGTGCATACAATGGAAGAATTGAAGCTTACCGGGAACCATCTGAAAGGTTCCCGTCCAATTTTGACATTTTCATCAAATTTTGATAAAGATGTCCACTGGAAACTTCTGAAGGAAATAATTGTTCAGCGCAACAACATGTTTTCTCCTCAGATTTTTGGAACTCCGAAGGAGCATCGACATTCTAAACCATATCATGATCATGTATTTGTTTTCTCCATTGTTGATGACCACATCTGGTTCCGGAATTACCAGATAGCTGTTCCACATAATGAATCAGATAAAGTCGCCCGAGGAGGACTAGATAAAATGACACTCATTGAGGTTGGCCCACGATTCTGTTTGAATCCAATCAAGATATTTGGTGGAAGTTTTGGAGGCCCTACCCTATATGAGAACCCACTTTATGTATCGCCAAACCAGATTCGAGCATTGGAGAAGAAGCAGAAGGCTGGGAAATACTCGAAGAAAGTCAAAGCGAAAACGAGGAGGAAGATGCACGAGTTATCAAATCCATTGGAACCAGACGAGTTTGCTGATATGTGGAAGGAATAG

Protein sequence

MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLITCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEIIVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAKTRRKMHELSNPLEPDEFADMWKE

Homology

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BLAST of Lsi06G001480 vs. ExPASy Swiss-Prot
Match: Q9LE16 (Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-1 PE=2 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 4.9e-150
Identity = 255/324 (78.70%), Postives = 281/324 (86.73%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           M +KRKHSE +    VK  DSAPERP+RTL+GWKDK+   E       +VFRNKEKVL+T
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKE+
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           +         QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG 
Sbjct: 181 LT--------QIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGD 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEF DMW +
Sbjct: 301 KTRRKMHELSNPLEPDEFTDMWND 314

[Close]

BLAST of Lsi06G001480 vs. ExPASy Swiss-Prot
Match: Q9C928 (Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BRIX1-2 PE=2 SV=1)

HSP 1 Score: 526.2 bits (1354), Expect = 2.7e-148
Identity = 253/326 (77.61%), Postives = 283/326 (86.81%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKK-DDSAPERPKRTLMGWKDK-EVAKECEPGCDHAVFRNKEKVL 60
           M +KRKHSE      VKK D+ AP+RPKRTL+GWKDK E   E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  ITCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           +TCSRRI+FRYR LMLNIVSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 181 EIIVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVAR 240
           E++         Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+
Sbjct: 181 EMLT--------QVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAK 240

Query: 241 GGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKV 300
           GGLDKMTLIEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+
Sbjct: 241 GGLDKMTLIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKI 300

Query: 301 KAKTRRKMHELSNPLEPDEFADMWKE 325
           KAKTR+KMHELSNPLEPDEFADMWK+
Sbjct: 301 KAKTRKKMHELSNPLEPDEFADMWKD 318

[Close]

BLAST of Lsi06G001480 vs. ExPASy Swiss-Prot
Match: Q8UVY2 (Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis OX=8355 GN=brix1 PE=2 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 8.2e-65
Identity = 141/323 (43.65%), Postives = 195/323 (60.37%), Query Frame = 0


Query: 2   AKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKE---CEPGCDHAVFRNKEKVL 61
           A KRK    LP V+        ++ K+ L G + +  A E     P      ++NKE+VL
Sbjct: 3   AYKRKRGS-LPEVATN-----TKKAKKQLAGSEQEATAGEEFIVPPPVSEGKWKNKERVL 62

Query: 62  ITCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 121
           I  SR INFR RHLM ++ SL+PH + + K++ R  K   +NE+ E+K C+  ++FE +K
Sbjct: 63  IFSSRGINFRTRHLMQDLRSLMPHSRAETKMD-RKDKLFVVNEVCEMKNCNKCIYFEAKK 122

Query: 122 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 181
            +DLY+W++  P GPS KFLV  +HT+ ELK++GN LKGSRPIL+F   FD++  + LLK
Sbjct: 123 KQDLYMWLSNSPEGPSAKFLVQNIHTLAELKMSGNCLKGSRPILSFDPAFDREPQYALLK 182

Query: 182 EIIVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVAR 241
           E++         QIFGTP+ H  S+P+ DH+F FSI D+ IWFRNYQI     E D    
Sbjct: 183 ELLT--------QIFGTPRYHPRSQPFVDHIFTFSIADNRIWFRNYQII----EED---- 242

Query: 242 GGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKV 301
                  L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A K  +K 
Sbjct: 243 -----AALVEIGPRFVLNLIKIFKGSFGGPTLYENPHYQSPNMHRRMIRLATAAKVKEKQ 297

Query: 302 KAKTRRKMHELSN----PLEPDE 318
           + K  +K+ +  +    P++P E
Sbjct: 303 QVKEVQKLKKEEDRPVIPVDPTE 297

[Close]

BLAST of Lsi06G001480 vs. ExPASy Swiss-Prot
Match: Q8TDN6 (Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 SV=2)

HSP 1 Score: 248.1 bits (632), Expect = 1.4e-64
Identity = 142/323 (43.96%), Postives = 195/323 (60.37%), Query Frame = 0


Query: 2   AKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLITC 61
           AKK K +EI        D   P +   T    +++E  +   P C    ++NKE++LI  
Sbjct: 16  AKKPKRNEI--------DAEPPAKRHATAEEVEEEERDRIPGPVC-KGKWKNKERILIFS 75

Query: 62  SRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHKD 121
           SR INFR RHLM ++  L+PH K D K++ R  K   +NE+ E+K C+  ++FE +K +D
Sbjct: 76  SRGINFRTRHLMQDLRMLMPHSKADTKMD-RKDKLFVINEVCEMKNCNKCIYFEAKKKQD 135

Query: 122 LYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEII 181
           LY+W++  P GPS KFLV  +HT+ ELK+TGN LKGSRP+L+F   FD+  H+ LLKE++
Sbjct: 136 LYMWLSNSPHGPSAKFLVQNIHTLAELKMTGNCLKGSRPLLSFDPAFDELPHYALLKELL 195

Query: 182 VQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGL 241
           +        QIF TP+ H  S+P+ DHVF F+I+D+ IWFRN+QI     E D       
Sbjct: 196 I--------QIFSTPRYHPKSQPFVDHVFTFTILDNRIWFRNFQII----EED------- 255

Query: 242 DKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKAK 301
               L+E+GPRF LN IKIF GSFGGPTLYENP Y SPN  R + +   A KY +K + K
Sbjct: 256 --AALVEIGPRFVLNLIKIFQGSFGGPTLYENPHYQSPNMHRRVIRSITAAKYREKQQVK 307

Query: 302 TRRKMH--ELSNPLEPDEFADMW 323
             +K+   E    L  D  AD++
Sbjct: 316 DVQKLRKKEPKTLLPHDPTADVF 307

[Close]

BLAST of Lsi06G001480 vs. ExPASy Swiss-Prot
Match: Q4QQT6 (Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 2.4e-64
Identity = 137/298 (45.97%), Postives = 182/298 (61.07%), Query Frame = 0


Query: 34  KDKEVAKECEPGCDH-------AVFRNKEKVLITCSRRINFRYRHLMLNIVSLLPHCKKD 93
           K  +VAKE E   D          ++NKE++LI  SR INFR RHLM ++  L+PH K D
Sbjct: 31  KQADVAKEAEEEKDRIPGPVCKGKWKNKERILIFSSRGINFRTRHLMQDLRMLMPHSKAD 90

Query: 94  NKVESRSSKGATLNELVELKGCSSSLFFECRKHKDLYLWMAKCPSGPSVKFLVNAVHTME 153
            K++ R  K   +NE+ E+K C+  ++FE +K +DLY+W++  P GPS KFLV  +HT+ 
Sbjct: 91  TKMD-RKDKLFVINEVCEMKNCNKCIYFEAKKKQDLYMWLSNSPHGPSAKFLVQNIHTLA 150

Query: 154 ELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEIIVQRNNMFSPQIFGTPKEHRHSKPYH 213
           ELK+TGN LKGSRP+L+F   FD   H+ LLKE ++        QIF TP+ H  S+P+ 
Sbjct: 151 ELKMTGNCLKGSRPLLSFDPAFDDLPHYALLKEFLI--------QIFSTPRYHPKSQPFV 210

Query: 214 DHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGGLDKMTLIEVGPRFCLNPIKIFGGSFG 273
           DHVF F+I+D+ IWFRN+QI     E D           L+E+GPRF LN IKIF GSFG
Sbjct: 211 DHVFTFTILDNRIWFRNFQII----EED---------AALVEIGPRFVLNLIKIFQGSFG 270

Query: 274 GPTLYENPLYVSPNQIRALEKKQKAGKYSKK--VKAKTRRKMHELSNPLEPDEFADMW 323
           GPTLYENP Y SPN  R + +   A KY +K  VK   + +  E    L  D  AD++
Sbjct: 271 GPTLYENPHYQSPNMHRRVVRSITAAKYREKQQVKDVQKSRKKEPKTILPHDPTADVF 306

[Close]

BLAST of Lsi06G001480 vs. ExPASy TrEMBL
Match: A0A1S3BQS3 (ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE=3 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 7.8e-175
Identity = 301/324 (92.90%), Postives = 310/324 (95.68%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           MAKKRKHSE +PTVSVKKD++A ERPKRTLMGWKDKEV K+ E G DHAVFRNKEKVL+T
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           I+        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGG
Sbjct: 181 II--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEFADMWKE
Sbjct: 301 KTRRKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. ExPASy TrEMBL
Match: A0A5D3CG95 (Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003710 PE=3 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 7.8e-175
Identity = 301/324 (92.90%), Postives = 310/324 (95.68%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           MAKKRKHSE +PTVSVKKD++A ERPKRTLMGWKDKEV K+ E G DHAVFRNKEKVL+T
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           I+        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGG
Sbjct: 181 II--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEFADMWKE
Sbjct: 301 KTRRKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. ExPASy TrEMBL
Match: A0A6J1EW75 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN=LOC111437121 PE=3 SV=1)

HSP 1 Score: 619.4 bits (1596), Expect = 8.6e-174
Identity = 300/324 (92.59%), Postives = 306/324 (94.44%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           M KKRKHSE LP VSVKKD+ APERPKRTL GWKDKEVAKE E G DHAVFRNKEKVL+T
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           IV        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGG
Sbjct: 181 IV--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLE DEFADMWKE
Sbjct: 301 KTRRKMHELSNPLEQDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. ExPASy TrEMBL
Match: A0A6J1E0T2 (ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 GN=LOC111026105 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 1.6e-172
Identity = 300/325 (92.31%), Postives = 307/325 (94.46%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           MAKKRKHSE L +V+VKKD  APERPKRTLMGWKDKEV KE E G DHAVFRNKEKVL+T
Sbjct: 1   MAKKRKHSEALASVAVKKDSDAPERPKRTLMGWKDKEVGKESESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNES-DKVARG 240
           IV        QIFG PKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNES DKVARG
Sbjct: 181 IV--------QIFGIPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESADKVARG 240

Query: 241 GLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVK 300
           GLDK+TLIEVGPRFCLNPIKIFGGSFGGPTLYENPLY+SPNQIRALEKKQKAGKYSKKVK
Sbjct: 241 GLDKVTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYISPNQIRALEKKQKAGKYSKKVK 300

Query: 301 AKTRRKMHELSNPLEPDEFADMWKE 325
           AKTRRKMHELSNPLEPDEFADMWKE
Sbjct: 301 AKTRRKMHELSNPLEPDEFADMWKE 317

[Close]

BLAST of Lsi06G001480 vs. ExPASy TrEMBL
Match: A0A6J1I0V9 (ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=LOC111467989 PE=3 SV=1)

HSP 1 Score: 614.4 bits (1583), Expect = 2.8e-172
Identity = 298/324 (91.98%), Postives = 305/324 (94.14%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           MAKKRKHSE LP VSVKKD+ A ERPKRTL GWKDKEV KE E G DHAVFRNKEKVL+T
Sbjct: 1   MAKKRKHSETLPIVSVKKDEGALERPKRTLTGWKDKEVVKEAESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           IV        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNES KVARGG
Sbjct: 181 IV--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESVKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKK+KAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKKKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEFADMWKE
Sbjct: 301 KTRRKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. NCBI nr
Match: XP_038879963.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_038879964.1 ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_038879966.1 ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 627.1 bits (1616), Expect = 8.5e-176
Identity = 304/324 (93.83%), Postives = 309/324 (95.37%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           MAKKRK SE LPTVS KKD++APERPKRTLMGWKD+EVAKECE G DHAVFRNKEKVL+T
Sbjct: 1   MAKKRKRSETLPTVSTKKDENAPERPKRTLMGWKDREVAKECEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLK SRPILTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKSSRPILTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           IV        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG
Sbjct: 181 IV--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           K RRKMHELSNPLEPDEFADMWKE
Sbjct: 301 KMRRKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. NCBI nr
Match: XP_038894805.1 (ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida])

HSP 1 Score: 624.0 bits (1608), Expect = 7.2e-175
Identity = 303/324 (93.52%), Postives = 308/324 (95.06%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           M KKRKHSE LP  SVKKDD+A ERPKRTLMGWKDKEV+KE + G DHA+FRNKEKVL+T
Sbjct: 1   MVKKRKHSETLPAESVKKDDAALERPKRTLMGWKDKEVSKESDSGSDHAIFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           IV        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG
Sbjct: 181 IV--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEFADMWKE
Sbjct: 301 KTRRKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. NCBI nr
Match: XP_008450669.1 (PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450671.1 PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >TYK10224.1 ribosome biogenesis protein BRX1-like [Cucumis melo var. makuwa])

HSP 1 Score: 622.9 bits (1605), Expect = 1.6e-174
Identity = 301/324 (92.90%), Postives = 310/324 (95.68%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           MAKKRKHSE +PTVSVKKD++A ERPKRTLMGWKDKEV K+ E G DHAVFRNKEKVL+T
Sbjct: 1   MAKKRKHSETVPTVSVKKDENALERPKRTLMGWKDKEVTKKSEAGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKE+
Sbjct: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEM 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           I+        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGG
Sbjct: 181 II--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEFADMWKE
Sbjct: 301 KTRRKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. NCBI nr
Match: KAG7037539.1 (Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 622.5 bits (1604), Expect = 2.1e-174
Identity = 301/324 (92.90%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           M KKRKHSE LP VSVKKD+ APERPKRTL GWKDKEVAKE E G DHAVFRNKEKVL+T
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           IV        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGG
Sbjct: 181 IV--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEFADMWKE
Sbjct: 301 KTRRKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. NCBI nr
Match: KAG6588467.1 (Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 622.5 bits (1604), Expect = 2.1e-174
Identity = 301/324 (92.90%), Postives = 307/324 (94.75%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           M KKRKHSE LP VSVKKD+ APERPKRTL GWKDKEVAKE E G DHAVFRNKEKVL+T
Sbjct: 1   MPKKRKHSETLPIVSVKKDEGAPERPKRTLTGWKDKEVAKETESGSDHAVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKDNKVESRSSKGATLNELVELKGCSS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNVVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLYLWM+KCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNFDKDVHWKLLKEI
Sbjct: 121 DLYLWMSKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFDKDVHWKLLKEI 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           IV        QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDKVARGG
Sbjct: 181 IV--------QIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKVARGG 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEFADMWKE
Sbjct: 301 KTRRKMHELSNPLEPDEFADMWKE 316

[Close]

BLAST of Lsi06G001480 vs. TAIR 10
Match: AT3G15460.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 531.9 bits (1369), Expect = 3.5e-151
Identity = 255/324 (78.70%), Postives = 281/324 (86.73%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKKDDSAPERPKRTLMGWKDKEVAKECEPGCDHAVFRNKEKVLIT 60
           M +KRKHSE +    VK  DSAPERP+RTL+GWKDK+   E       +VFRNKEKVL+T
Sbjct: 1   MGRKRKHSETVTAAPVK--DSAPERPQRTLLGWKDKKEDAENSKPAYASVFRNKEKVLVT 60

Query: 61  CSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRKHK 120
           CSRRINFRYRHLMLN+VSLLPHCKKD+KVE++SS+GATLNEL+ELKG SS LFFECRKHK
Sbjct: 61  CSRRINFRYRHLMLNMVSLLPHCKKDSKVEAKSSRGATLNELIELKGSSSCLFFECRKHK 120

Query: 121 DLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLKEI 180
           DLY+WM K P GPSVKFLVNAVHTMEELKLTGNHLKGSRP+LTFSSNF+ D HWKLLKE+
Sbjct: 121 DLYMWMVKSPGGPSVKFLVNAVHTMEELKLTGNHLKGSRPLLTFSSNFENDAHWKLLKEM 180

Query: 181 IVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVARGG 240
           +         QIFG P+ HR SKPYHDHVFVFSIVDDHIWFRNYQI+VPHNESDK+ARG 
Sbjct: 181 LT--------QIFGIPEGHRKSKPYHDHVFVFSIVDDHIWFRNYQISVPHNESDKIARGD 240

Query: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKVKA 300
           LDKMTLIEVGPRFCLNPIKIFGGSFGG TLYENP YVSPNQIRALEK+ KAGK++KK+KA
Sbjct: 241 LDKMTLIEVGPRFCLNPIKIFGGSFGGTTLYENPFYVSPNQIRALEKRNKAGKFAKKIKA 300

Query: 301 KTRRKMHELSNPLEPDEFADMWKE 325
           KTRRKMHELSNPLEPDEF DMW +
Sbjct: 301 KTRRKMHELSNPLEPDEFTDMWND 314

[Close]

BLAST of Lsi06G001480 vs. TAIR 10
Match: AT1G52930.1 (Ribosomal RNA processing Brix domain protein )

HSP 1 Score: 526.2 bits (1354), Expect = 1.9e-149
Identity = 253/326 (77.61%), Postives = 283/326 (86.81%), Query Frame = 0


Query: 1   MAKKRKHSEILPTVSVKK-DDSAPERPKRTLMGWKDK-EVAKECEPGCDHAVFRNKEKVL 60
           M +KRKHSE      VKK D+ AP+RPKRTL+GWKDK E   E       + F+NKEKVL
Sbjct: 1   MGRKRKHSETEAPAPVKKSDEPAPDRPKRTLLGWKDKSEGEAEKAKALTSSGFKNKEKVL 60

Query: 61  ITCSRRINFRYRHLMLNIVSLLPHCKKDNKVESRSSKGATLNELVELKGCSSSLFFECRK 120
           +TCSRRI+FRYR LMLNIVSLLPHCKKD+KVE++SSKGATLNEL+ELK  +S LFFECRK
Sbjct: 61  VTCSRRISFRYRSLMLNIVSLLPHCKKDSKVEAKSSKGATLNELIELKNSNSCLFFECRK 120

Query: 121 HKDLYLWMAKCPSGPSVKFLVNAVHTMEELKLTGNHLKGSRPILTFSSNFDKDVHWKLLK 180
           HKDLY+WM K P+GPSVKFLV AVH MEE+KLTGNHLKGSRP+LTFSSNFDKD HWKLLK
Sbjct: 121 HKDLYMWMVKSPNGPSVKFLVKAVHAMEEMKLTGNHLKGSRPLLTFSSNFDKDAHWKLLK 180

Query: 181 EIIVQRNNMFSPQIFGTPKEHRHSKPYHDHVFVFSIVDDHIWFRNYQIAVPHNESDKVAR 240
           E++         Q+FG PKEHR SKPYHDHVFVFSIVD+HIWFRNYQI+VPHNESDK+A+
Sbjct: 181 EMLT--------QVFGIPKEHRKSKPYHDHVFVFSIVDEHIWFRNYQISVPHNESDKIAK 240

Query: 241 GGLDKMTLIEVGPRFCLNPIKIFGGSFGGPTLYENPLYVSPNQIRALEKKQKAGKYSKKV 300
           GGLDKMTLIEVGPRFCLNPIKIF GSFGGPTLYENPLYVSPNQIRALEK+ KAGK++KK+
Sbjct: 241 GGLDKMTLIEVGPRFCLNPIKIFAGSFGGPTLYENPLYVSPNQIRALEKRNKAGKFAKKI 300

Query: 301 KAKTRRKMHELSNPLEPDEFADMWKE 325
           KAKTR+KMHELSNPLEPDEFADMWK+
Sbjct: 301 KAKTRKKMHELSNPLEPDEFADMWKD 318

The following BLAST results are available for this feature:

BLAST of Lsi06G001480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE16	4.9e-150	78.70	Ribosome biogenesis protein BRX1 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q9C928	2.7e-148	77.61	Ribosome biogenesis protein BRX1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=BR...	[more]
Q8UVY2	8.2e-65	43.65	Ribosome biogenesis protein BRX1 homolog OS=Xenopus laevis OX=8355 GN=brix1 PE=2...	[more]
Q8TDN6	1.4e-64	43.96	Ribosome biogenesis protein BRX1 homolog OS=Homo sapiens OX=9606 GN=BRIX1 PE=1 S...	[more]
Q4QQT6	2.4e-64	45.97	Ribosome biogenesis protein BRX1 homolog OS=Rattus norvegicus OX=10116 GN=Brix1 ...	[more]

BLAST of Lsi06G001480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BQS3	7.8e-175	92.90	ribosome biogenesis protein BRX1-like OS=Cucumis melo OX=3656 GN=LOC103492188 PE...	[more]
A0A5D3CG95	7.8e-175	92.90	Ribosome biogenesis protein BRX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1EW75	8.6e-174	92.59	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1E0T2	1.6e-172	92.31	ribosome biogenesis protein BRX1 homolog 1-like OS=Momordica charantia OX=3673 G...	[more]
A0A6J1I0V9	2.8e-172	91.98	ribosome biogenesis protein BRX1 homolog 1-like OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of Lsi06G001480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879963.1	8.5e-176	93.83	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida] >XP_03887996...	[more]
XP_038894805.1	7.2e-175	93.52	ribosome biogenesis protein BRX1 homolog 1-like [Benincasa hispida]	[more]
XP_008450669.1	1.6e-174	92.90	PREDICTED: ribosome biogenesis protein BRX1-like [Cucumis melo] >XP_008450670.1 ...	[more]
KAG7037539.1	2.1e-174	92.90	Ribosome biogenesis protein BRX1-like 1 [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6588467.1	2.1e-174	92.90	Ribosome biogenesis protein BRX1-like 1, partial [Cucurbita argyrosperma subsp. ...	[more]

BLAST of Lsi06G001480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15460.1	3.5e-151	78.70	Ribosomal RNA processing Brix domain protein	[more]
AT1G52930.1	1.9e-149	77.61	Ribosomal RNA processing Brix domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007109	Brix domain	SMART	SM00879	Brix_2	coord: 58..260 e-value: 5.9E-45 score: 165.3
IPR007109	Brix domain	PFAM	PF04427	Brix	coord: 62..259 e-value: 5.5E-31 score: 108.2
IPR007109	Brix domain	PROSITE	PS50833	BRIX	coord: 55..266 score: 29.803768
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 288..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 305..324
None	No IPR available	PANTHER	PTHR13634:SF3	RIBOSOME BIOGENESIS PROTEIN BRX1 HOMOLOG 2	coord: 1..324
None	No IPR available	SUPERFAMILY	52954	Class II aaRS ABD-related	coord: 56..263
IPR026532	Ribosome biogenesis protein BRX1	PANTHER	PTHR13634	RIBOSOME BIOGENESIS PROTEIN BRIX	coord: 1..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G001480.1	Lsi06G001480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006364	rRNA processing
molecular_function	GO:0019843	rRNA binding