Lsi06G001150 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G001150
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	REF/SRPP-like protein At3g05500
Location	chr06: 1117399 .. 1119923 (-)
RNA-Seq Expression	Lsi06G001150
Synteny	Lsi06G001150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTGAATCTACGTTCCCCTTAAGCTTCTCAGTTTCCACCATGGCCGTCCGTTTTCACCGACTCTCTTGCCGCGTTCTTCTATCCTATAAATCCTTAATCTTCCCTTCTTCCTCTTCCATCGATTATATCGCCAACTATTTCCATTTCATTTCTCCGATCACATCTTCCCTTCCATTTCCGATCTTAAAACTCCCCTCAATTTCCCTTCTTTGTTTCTGGCTATGGCTGAATCCGATCCTTCGTCGCAGCACAAGGAAATGGTAAGACTAAGACTAAGACTATGATTCTCTCTTTACTCAGAATTCGGTGGGGATCGGTTAATTTAACGATTGGATTTTTTCTTTTGTGTAGGCGGCTAGGGCTGAGGAGGAGAGGCTGAAGTATTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTTAATGTTTATGGCTATGCGAAGGACCGGTCCGGTCCACTGAAGCCCGGCGTTGAGACGGTTGAGGGCACTGTGAAGTCTGTTGTTGGTCCTTTGTATAATAAGTTCCATGGCGTTCCGATTGAGGTTCTTAAATTCGTCGATCGCAAGGTTGCTTTTCTTTCTTCTGTCAATGCCTTCAATCATTTCAATTTCTTATTTCATTGTTTGATTCTAAACAAATTTCCCTTCGATTTCTTCTCGGCTGGATGGATATATCAATTAACACTTGTTCTCTGAGAAATCTGTTAAAAAAATTTAGGTTAAATTATAAATTTGATTAGAAAAAAAATTAGAATTTAGTTTTCACAGTTTTGTAATTAGAATTTAGTCCCTAAAATTTTCCTACTGTGGGAGGATTTTATCAAATTTATGAGGTTTTTATGTAACGCTCTAGGCTCAGGATTTAGAATCTCAATCTCAATATGCTTTGTCCTCGCATGCTTCTTAGGAATTGTAACGCTATTGGCTCAGGATTCGAAATCTTGGCCTCGGCGTTCCATGCATATCCTTAGAATACTTTGTCCTACCTTCATATCTTAGAATCCTCGCGTCTTATTTCATTCATGTATTCCTCTGAACTCATAGACTAAATTCTATAGACTAAATTCTAAAATCATAGGGACCAAATTTGTATTTAATTTAACCAACTTTTAGGTTTAAATTCCTTCTTGTAGATTTTTCGTTGTGATTTCTCCCCTGGTCGTAGTCTCTGATTTTTCGTTTTGATACTCATATTTGTTTTGTGTTTATGAAATTGATAGCATAGCTTTATGTATGTTTATTAAATATTGACATTTTCGAGCTTGACTATTATATGAATGGTTAGTAGAAGGATCAAACTGGGTATTTTCTTAAAGATCAAGGACTAAATAGTTATTGTTTAAAAGTTGGGGGCAGTGTTTATTTTTGAGGAGACCAAACCAGGAAAGTCCTGAATGAACATTTTCGTCCAAATGGAGTTTATACCAATTTTGTAATAGAAAGGCCAAAATGGAGTCTAATGATTAAAATTGAGAAATTTAAAGGATTGAGGTTGAATTAGAAGTTAAAAAATTGTGTATAGCTAATCAAAGATTCGAAGCTATGTTATTTCACTTGAAATGATGCCAAAAACTGAAAGTGTTGAGCATTAGAACATTGAGAAATATTTTATTTTACAGGAAACTCATTTTGTTTGATTATAAATGAGCAGGTGGACGAGTCAGTAACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAGGCCATGTCTGCTGCACAGCAGGCGCCTGAAGTCGCTCGAAATGTAGCCTCTGAGGTCCGACGCACTGGCCTTAAAGACTCCGTGTCTGGGATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGTGCAGCTTCAGCATGGCACAAGCTCAACCAGCTCCCTGTCTTCCCCACTGTCGCGCAAGCTATCTTGCCAACAGCAGCATACTGCACAGAGAAATACAACGAGACCGTACGAACCTCAGCCGAGAAGGGATACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGAACGGAATTGAGATGAAGCCCTTGGTGAATTAAGAGCTAAACCTGGTTTTTCTTTAATGATATGTAAGAAAAGAACACATTATGGATGTTTTTGTTGGAGGGGATGATTCACTTCCAATGTTTGAGAAATTATTCGATGTGACTGTCACGTTTTGATGAGTCGTATGGAGGCGTATTTGTATTTGTTGGTTGGTGTTATAGTTCTTCTGAGCCTCATGGCAATTTATTGTTGAGGGGGTTTTTCATGACAGATATGATGGGAGAAAATGGTTCAAATCTTATCGTCTCTTTTTTATTATACTCTTGCACTTTGATTTTCTTGTGGCGAAAGTTCGAAAATCTGAACTTCGTCGCTAGGTAATTTATAGAGAATTTGAAAATTGAAGTTTGAAAATGAAGGATTCAATAAAAATATGGATGAAAATTAAATTTT

mRNA sequence

TCTGAATCTACGTTCCCCTTAAGCTTCTCAGTTTCCACCATGGCCGTCCGTTTTCACCGACTCTCTTGCCGCGTTCTTCTATCCTATAAATCCTTAATCTTCCCTTCTTCCTCTTCCATCGATTATATCGCCAACTATTTCCATTTCATTTCTCCGATCACATCTTCCCTTCCATTTCCGATCTTAAAACTCCCCTCAATTTCCCTTCTTTGTTTCTGGCTATGGCTGAATCCGATCCTTCGTCGCAGCACAAGGAAATGGCGGCTAGGGCTGAGGAGGAGAGGCTGAAGTATTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTTAATGTTTATGGCTATGCGAAGGACCGGTCCGGTCCACTGAAGCCCGGCGTTGAGACGGTTGAGGGCACTGTGAAGTCTGTTGTTGGTCCTTTGTATAATAAGTTCCATGGCGTTCCGATTGAGGTTCTTAAATTCGTCGATCGCAAGGTGGACGAGTCAGTAACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAGGCCATGTCTGCTGCACAGCAGGCGCCTGAAGTCGCTCGAAATGTAGCCTCTGAGGTCCGACGCACTGGCCTTAAAGACTCCGTGTCTGGGATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGTGCAGCTTCAGCATGGCACAAGCTCAACCAGCTCCCTGTCTTCCCCACTGTCGCGCAAGCTATCTTGCCAACAGCAGCATACTGCACAGAGAAATACAACGAGACCGTACGAACCTCAGCCGAGAAGGGATACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGAACGGAATTGAGATGAAGCCCTTGGTGAATTAAGAGCTAAACCTGGTTTTTCTTTAATGATATGTAAGAAAAGAACACATTATGGATGTTTTTGTTGGAGGGGATGATTCACTTCCAATGTTTGAGAAATTATTCGATGTGACTGTCACGTTTTGATGAGTCGTATGGAGGCGTATTTGTATTTGTTGGTTGGTGTTATAGTTCTTCTGAGCCTCATGGCAATTTATTGTTGAGGGGGTTTTTCATGACAGATATGATGGGAGAAAATGGTTCAAATCTTATCGTCTCTTTTTTATTATACTCTTGCACTTTGATTTTCTTGTGGCGAAAGTTCGAAAATCTGAACTTCGTCGCTAGGTAATTTATAGAGAATTTGAAAATTGAAGTTTGAAAATGAAGGATTCAATAAAAATATGGATGAAAATTAAATTTT

Coding sequence (CDS)

ATGGCTGAATCCGATCCTTCGTCGCAGCACAAGGAAATGGCGGCTAGGGCTGAGGAGGAGAGGCTGAAGTATTTGGAGTTCGTTCAAACGGCGGCGTTTCGAGCGACGGAGTGTTTCTTTAATGTTTATGGCTATGCGAAGGACCGGTCCGGTCCACTGAAGCCCGGCGTTGAGACGGTTGAGGGCACTGTGAAGTCTGTTGTTGGTCCTTTGTATAATAAGTTCCATGGCGTTCCGATTGAGGTTCTTAAATTCGTCGATCGCAAGGTGGACGAGTCAGTAACGAAGATCGACCGCCACGTTCCTCCAACAGTCAAGCAGGCCTCATCACAGGCCATGTCTGCTGCACAGCAGGCGCCTGAAGTCGCTCGAAATGTAGCCTCTGAGGTCCGACGCACTGGCCTTAAAGACTCCGTGTCTGGGATTGTGAAATCTGTGTATGCCAAGTATGAGCCAACTGCAAAGCAACTCTACTCCAAATACGAGCCCAAGGCCGAGCAGTGTGCAGCTTCAGCATGGCACAAGCTCAACCAGCTCCCTGTCTTCCCCACTGTCGCGCAAGCTATCTTGCCAACAGCAGCATACTGCACAGAGAAATACAACGAGACCGTACGAACCTCAGCCGAGAAGGGATACAAGGTCTCTTCATACCTTCCATTGGTCCCTACTGAGAGGATTGCCAAAGTGTTCAGCAAGAACGGAATTGAGATGAAGCCCTTGGTGAATTAA

Protein sequence

MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPLVN

Homology

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BLAST of Lsi06G001150 vs. ExPASy Swiss-Prot
Match: Q9MA63 (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=1 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.8e-80
Identity = 151/240 (62.92%), Postives = 192/240 (80.00%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA     +Q K    + E+ERLKYL+FVQ AA  A   F  +Y  AKD+SGPLKPGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP VKQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
            VAR +ASEVRR G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCA SAW KLNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           +FP +AQ  +PTAA+C+EKYN+TV  +AEKGY+V+SY+PLVPTERI+K+F++   E +PL
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

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BLAST of Lsi06G001150 vs. ExPASy Swiss-Prot
Match: Q9SW70 (Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 5.2e-72
Identity = 139/230 (60.43%), Postives = 179/230 (77.83%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MAES+   Q +      EE+RLKYL+FVQ AA     CF ++Y YAK+ SGPLKPGV+TV
Sbjct: 1   MAESEAKQQPE--TVHGEEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVK+V+GP+Y KF+ VP E+L FVDRKV+ S+ +++RHVP  VK+AS QA++ AQ+AP
Sbjct: 61  EGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           E+A  VASEV+R G+ D+   I K+VY+K EPTAK+L SKYEP AEQ A SAW  LN+LP
Sbjct: 121 ELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVF 231
           +FP VAQ ++PTAAY +EKYN++V  +AE+GY V+ YLPL+PTERIAKVF
Sbjct: 181 LFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIPTERIAKVF 228

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BLAST of Lsi06G001150 vs. ExPASy Swiss-Prot
Match: A2Y0H2 (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_017815 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 4.3e-58
Identity = 116/219 (52.97%), Postives = 158/219 (72.15%), Query Frame = 0


Query: 12  EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y YAK  +GPL+PGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP VK           +AP +AR+ A+EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 RTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILP 191
           + GL  + +G+ KS  A+ EP A+ LY++YEP AE+ AA AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVF 231
            AA  + +YN  V   A++G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

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BLAST of Lsi06G001150 vs. ExPASy Swiss-Prot
Match: Q9FRA7 (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0151300 PE=2 SV=2)

HSP 1 Score: 226.1 bits (575), Expect = 4.3e-58
Identity = 116/219 (52.97%), Postives = 158/219 (72.15%), Query Frame = 0


Query: 12  EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPL 71
           EM A AEEERL+YLEFVQ AA +        Y YAK  +GPL+PGV+ VEGTVK+VVGP+
Sbjct: 25  EMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPV 84

Query: 72  YNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVR 131
           Y++FHGVP+++LKF+DRKV ESV ++DR VPP VK           +AP +AR+ A+EVR
Sbjct: 85  YDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVK-----------EAPGLARSAAAEVR 144

Query: 132 RTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILP 191
           + GL  + +G+ KS  A+ EP A+ LY++YEP AE+ AA AW  LN+LP+ P+V +A+LP
Sbjct: 145 QAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLP 204

Query: 192 TAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVF 231
            AA  + +YN  V   A++G  V++YLPLVPTER+++VF
Sbjct: 205 AAASLSARYNTAVADGAKRGSAVATYLPLVPTERLSRVF 232

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BLAST of Lsi06G001150 vs. ExPASy Swiss-Prot
Match: Q41112 (Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 9.9e-55
Identity = 116/192 (60.42%), Postives = 138/192 (71.88%), Query Frame = 0


Query: 42  VYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHV 101
           +Y YAK+R+GPLKPGV TVE  VK+VV P+Y++FH VP+E+LK+ DRKV E    +DRHV
Sbjct: 6   LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHV 65

Query: 102 PPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKY 161
           P  VK+ SSQ           AR+V SEVRR    D VS   K+VY+KYEPT        
Sbjct: 66  PSNVKKVSSQ-----------ARSVVSEVRR----DGVSTFAKTVYSKYEPT-------- 125

Query: 162 EPKAEQCAASAWHKLNQLPVFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLV 221
              AEQCA SAW KLNQLP+FP VA A+LP AAYCTEKYNE + +SAEKGY+VS+YLPLV
Sbjct: 126 ---AEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLV 167

Query: 222 PTERIAKVFSKN 234
           PTE+IAKVFS N
Sbjct: 186 PTEKIAKVFSGN 167

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BLAST of Lsi06G001150 vs. ExPASy TrEMBL
Match: A0A1S3BP12 (REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 1.7e-121
Identity = 227/242 (93.80%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+SD SSQ ++MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVK ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           EVARNVASEVRR+GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWHKLNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSA+KGYKVSSYLPLVPTERIAKVFSKNG+EM+PL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Lsi06G001150 vs. ExPASy TrEMBL
Match: A0A6J1F5J8 (REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE=3 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 4.5e-119
Identity = 221/242 (91.32%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+PSSQH EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTA YCTEKYNETV+++++KGYKVSSYLPLVPTERIAKVFSK+ IEM+PL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Lsi06G001150 vs. ExPASy TrEMBL
Match: A0A6J1HXN7 (REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 5.9e-119
Identity = 220/242 (90.91%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+PSSQH EMAARAEEERLKYLEFVQTAAFRA+ECFFN YGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRASECFFNAYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EIARNVAMEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTA YCTEKYNETV+++++KGYKVSSYLPLVPTERIAKVFSK+ IEM+PL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

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BLAST of Lsi06G001150 vs. ExPASy TrEMBL
Match: A0A0A0M1J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1)

HSP 1 Score: 436.4 bits (1121), Expect = 7.7e-119
Identity = 223/242 (92.15%), Postives = 233/242 (96.28%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+SD SSQ ++M  RA++  LKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDLSSQRQDMPVRADQGSLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVV PLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAM AAQQAP
Sbjct: 61  EGTVKSVVAPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMFAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           EVAR+VASEVRR GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWHKLNQLP
Sbjct: 121 EVARSVASEVRRAGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSA+KGYKVSSYLPLVPTERIAKVFSKNG+EM+PL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Lsi06G001150 vs. ExPASy TrEMBL
Match: A0A5D3CFW4 (REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003980 PE=3 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 6.5e-118
Identity = 220/230 (95.65%), Postives = 227/230 (98.70%), Query Frame = 0


Query: 13  MAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLY 72
           MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPL 
Sbjct: 1   MAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLC 60

Query: 73  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRR 132
           NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVK ASSQAMSAAQQAPEVARNVASEVRR
Sbjct: 61  NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAPEVARNVASEVRR 120

Query: 133 TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPT 192
           +GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPT
Sbjct: 121 SGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPT 180

Query: 193 AAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPLVN 243
           AAYCTEKYNETVRTSA+KGYKVSSYLPLVPTERIAKVFSKNG+EM+PLVN
Sbjct: 181 AAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPLVN 230

[Close]

BLAST of Lsi06G001150 vs. NCBI nr
Match: XP_038879426.1 (REF/SRPP-like protein At3g05500 [Benincasa hispida])

HSP 1 Score: 447.6 bits (1150), Expect = 6.9e-122
Identity = 228/242 (94.21%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MAESDPSSQ +E  ARAE+ERLKYLEFVQTA FRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MAESDPSSQRQETVARAEQERLKYLEFVQTATFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVT+IDRHVPPTVKQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTRIDRHVPPTVKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           EVAR+VASEVRRTGLK+SVSGIVKSVYAK EPTAK+LYSKYEPKAEQCA SAWHKLNQLP
Sbjct: 121 EVARSVASEVRRTGLKESVSGIVKSVYAKCEPTAKELYSKYEPKAEQCAVSAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIA+VFSKNG+EMKPL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAEVFSKNGVEMKPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Lsi06G001150 vs. NCBI nr
Match: XP_008450634.1 (PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo])

HSP 1 Score: 445.3 bits (1144), Expect = 3.4e-121
Identity = 227/242 (93.80%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+SD SSQ ++MA RA+E+RLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV
Sbjct: 1   MADSDHSSQRQDMAVRADEDRLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPL NKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVK ASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLCNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKHASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           EVARNVASEVRR+GLKDSVSGIVKSVYAKYEP+AKQLYSKYEPKAEQCAASAWHKLNQLP
Sbjct: 121 EVARNVASEVRRSGLKDSVSGIVKSVYAKYEPSAKQLYSKYEPKAEQCAASAWHKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTAAYCTEKYNETVRTSA+KGYKVSSYLPLVPTERIAKVFSKNG+EM+PL
Sbjct: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAKKGYKVSSYLPLVPTERIAKVFSKNGVEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Lsi06G001150 vs. NCBI nr
Match: XP_023530281.1 (REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 440.3 bits (1131), Expect = 1.1e-119
Identity = 222/242 (91.74%), Postives = 237/242 (97.93%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+PSSQH+EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHQEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTA YCTEKYNETV+++++KGYKVSSYLPLVPTERIAKVFSK+ IEM+PL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Lsi06G001150 vs. NCBI nr
Match: KAG6588484.1 (REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022313.1 REF/SRPP-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 439.5 bits (1129), Expect = 1.9e-119
Identity = 222/242 (91.74%), Postives = 236/242 (97.52%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+PSSQH EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTA YCTEKYNETV+++++KGYKVSSYLPLVPTERIAKVFSK+ IEM+PL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Lsi06G001150 vs. NCBI nr
Match: XP_022933698.1 (REF/SRPP-like protein At3g05500 [Cucurbita moschata])

HSP 1 Score: 437.2 bits (1123), Expect = 9.3e-119
Identity = 221/242 (91.32%), Postives = 235/242 (97.11%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA+S+PSSQH EMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAK+R GPL+PGVETV
Sbjct: 1   MADSNPSSQHHEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKNRIGPLRPGVETV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVD SVTKIDRHVPPT+KQASSQAMSAAQQAP
Sbjct: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDASVTKIDRHVPPTIKQASSQAMSAAQQAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
           E+ARNVA EVR TGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWH+LNQLP
Sbjct: 121 EIARNVALEVRHTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHRLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           VFPTVAQAILPTA YCTEKYNETV+++++KGYKVSSYLPLVPTERIAKVFSK+ IEM+PL
Sbjct: 181 VFPTVAQAILPTAVYCTEKYNETVQSTSKKGYKVSSYLPLVPTERIAKVFSKDRIEMEPL 240

Query: 241 VN 243
           VN
Sbjct: 241 VN 242

[Close]

BLAST of Lsi06G001150 vs. TAIR 10
Match: AT3G05500.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 300.4 bits (768), Expect = 1.3e-81
Identity = 151/240 (62.92%), Postives = 192/240 (80.00%), Query Frame = 0


Query: 1   MAESDPSSQHKEMAARAEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETV 60
           MA     +Q K    + E+ERLKYL+FVQ AA  A   F  +Y  AKD+SGPLKPGVE+V
Sbjct: 1   MATQTDLAQPKLDMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESV 60

Query: 61  EGTVKSVVGPLYNKFHGVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAP 120
           EG VK+VVGP+Y K+H VP+EVLK++D+KVD SVT++DR VPP VKQ S+QA+SAAQ AP
Sbjct: 61  EGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAP 120

Query: 121 EVARNVASEVRRTGLKDSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLP 180
            VAR +ASEVRR G+ ++ SG+ KSVY+KYEP AK+LY+ YEPKAEQCA SAW KLNQLP
Sbjct: 121 IVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLP 180

Query: 181 VFPTVAQAILPTAAYCTEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMKPL 240
           +FP +AQ  +PTAA+C+EKYN+TV  +AEKGY+V+SY+PLVPTERI+K+F++   E +PL
Sbjct: 181 LFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVPTERISKIFAEEKAETEPL 240

[Close]

BLAST of Lsi06G001150 vs. TAIR 10
Match: AT2G47780.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 181.8 bits (460), Expect = 6.6e-46
Identity = 97/216 (44.91%), Postives = 136/216 (62.96%), Query Frame = 0


Query: 18  EEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFHG 77
           +E +LK+LEF+Q AA     CF  +Y  AKD +GPLK GVE +E  V++V+ PLY KFH 
Sbjct: 37  DEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHD 96

Query: 78  VPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLKD 137
           VP ++L FVDRKVD+    ++ +VP  VKQASSQA++           VA+EV+RTG+ D
Sbjct: 97  VPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQALT-----------VATEVQRTGVVD 156

Query: 138 SVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPTAAYCT 197
           +   I +SV             KYEP AE  AA+ W  LNQLP+FP VA  ++PTA Y +
Sbjct: 157 TTKSIARSV-----------RDKYEPAAEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWS 216

Query: 198 EKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKN 234
           EKYN+ VR   ++ Y  + YLP++P E+I+ +  ++
Sbjct: 217 EKYNDAVRYVGDRDYFGAEYLPMIPIEKISDILEQD 230

[Close]

BLAST of Lsi06G001150 vs. TAIR 10
Match: AT1G67360.2 (Rubber elongation factor protein (REF) )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 80/222 (36.04%), Postives = 106/222 (47.75%), Query Frame = 0


Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+L FV+ A         N+Y YAK  SGPLK  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLK 136
            VP  +L F+D KV E   K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPTAAYC 196
            + +      YA  E         Y+      +   W KLNQ      +    LP AA+ 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMK 239
           + +YN+ V      GY +  YLPLVP + I K + K     K
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRK 214

[Close]

BLAST of Lsi06G001150 vs. TAIR 10
Match: AT1G67360.1 (Rubber elongation factor protein (REF) )

HSP 1 Score: 124.0 bits (310), Expect = 1.6e-28
Identity = 80/222 (36.04%), Postives = 106/222 (47.75%), Query Frame = 0


Query: 17  AEEERLKYLEFVQTAAFRATECFFNVYGYAKDRSGPLKPGVETVEGTVKSVVGPLYNKFH 76
           ++E  LK+L FV+ A         N+Y YAK  SGPLK  VE VEG V +VV P+Y KF 
Sbjct: 8   SKEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFK 67

Query: 77  GVPIEVLKFVDRKVDESVTKIDRHVPPTVKQASSQAMSAAQQAPEVARNVASEVRRTGLK 136
            VP  +L F+D KV E   K D H PP  K+  +QA     +A E A++   E R  G K
Sbjct: 68  DVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGGPK 127

Query: 137 DSVSGIVKSVYAKYEPTAKQLYSKYEPKAEQCAASAWHKLNQLPVFPTVAQAILPTAAYC 196
            + +      YA  E         Y+      +   W KLNQ      +    LP AA+ 
Sbjct: 128 AAFN------YAATE---------YKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHF 187

Query: 197 TEKYNETVRTSAEKGYKVSSYLPLVPTERIAKVFSKNGIEMK 239
           + +YN+ V      GY +  YLPLVP + I K + K     K
Sbjct: 188 SSRYNDLVTDMTNMGYSLVGYLPLVPVDDIVKAYEKEDARRK 214

The following BLAST results are available for this feature:

BLAST of Lsi06G001150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MA63	1.8e-80	62.92	REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana OX=3702 GN=At3g05500 PE=...	[more]
Q9SW70	5.2e-72	60.43	Stress-related protein OS=Vitis riparia OX=96939 GN=SRP PE=2 SV=1	[more]
A2Y0H2	4.3e-58	52.97	REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_0...	[more]
Q9FRA7	4.3e-58	52.97	REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonic...	[more]
Q41112	9.9e-55	60.42	Stress-related protein OS=Phaseolus vulgaris OX=3885 GN=SRP PE=2 SV=1	[more]

BLAST of Lsi06G001150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BP12	1.7e-121	93.80	REF/SRPP-like protein At3g05500 OS=Cucumis melo OX=3656 GN=LOC103492163 PE=3 SV=...	[more]
A0A6J1F5J8	4.5e-119	91.32	REF/SRPP-like protein At3g05500 OS=Cucurbita moschata OX=3662 GN=LOC111441035 PE...	[more]
A0A6J1HXN7	5.9e-119	90.91	REF/SRPP-like protein At3g05500 OS=Cucurbita maxima OX=3661 GN=LOC111468972 PE=3...	[more]
A0A0A0M1J0	7.7e-119	92.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569430 PE=3 SV=1	[more]
A0A5D3CFW4	6.5e-118	95.65	REF/SRPP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16...	[more]

BLAST of Lsi06G001150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038879426.1	6.9e-122	94.21	REF/SRPP-like protein At3g05500 [Benincasa hispida]	[more]
XP_008450634.1	3.4e-121	93.80	PREDICTED: REF/SRPP-like protein At3g05500 [Cucumis melo]	[more]
XP_023530281.1	1.1e-119	91.74	REF/SRPP-like protein At3g05500 [Cucurbita pepo subsp. pepo]	[more]
KAG6588484.1	1.9e-119	91.74	REF/SRPP-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG70223...	[more]
XP_022933698.1	9.3e-119	91.32	REF/SRPP-like protein At3g05500 [Cucurbita moschata]	[more]

BLAST of Lsi06G001150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05500.1	1.3e-81	62.92	Rubber elongation factor protein (REF)	[more]
AT2G47780.1	6.6e-46	44.91	Rubber elongation factor protein (REF)	[more]
AT1G67360.2	1.6e-28	36.04	Rubber elongation factor protein (REF)	[more]
AT1G67360.1	1.6e-28	36.04	Rubber elongation factor protein (REF)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008802	Rubber elongation factor	PFAM	PF05755	REF	coord: 17..231 e-value: 2.9E-92 score: 308.1
IPR008802	Rubber elongation factor	PANTHER	PTHR33732	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 10..233
None	No IPR available	PANTHER	PTHR33732:SF9	REF/SRPP-LIKE PROTEIN OS05G0151300/LOC_OS05G05940	coord: 10..233

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G001150.1	Lsi06G001150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0080186	developmental vegetative growth
biological_process	GO:0034389	lipid droplet organization
biological_process	GO:0019915	lipid storage
biological_process	GO:0045927	positive regulation of growth
biological_process	GO:1902584	positive regulation of response to water deprivation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005811	lipid droplet