Lsi06G000680 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi06G000680
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	F-box protein At2g02240-like
Location	chr06: 598200 .. 598960 (-)
RNA-Seq Expression	Lsi06G000680
Synteny	Lsi06G000680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATAATAGCTCAATGTATATATTATTTTATAACTAATCATATCACATTATATATTTTAGTAGTGAACAATCTTTTCAATTTGTTTTCTATTCTTAAAATGGCTTTTATTTGAAGTTTTAATATAATGTTGTTAAAAAGAAACAACAATTTACCTTTTTTTTTTTTTTGGGAATTCAGTCCAAGATTTTTTTTTAAAAAAATAGTATATCTTTGATGCTCCATTTTTTTTCAAATATAGAAAATTTTTACCGTTTATAAACGATAGACTGTGATAGAATTCTATCACTTGAGTGATAGACAGTGAAATTTTTTTATATGTAAATAGTTTGATATTTTTTTTGTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNAATCAACACCAAATTGCTTTCCTCAAAAACACTTTACTTTGCATATCTCTTGGTGAAGTTTGCAGACAGAGCTTATGGATTAAACACTCACCCATCTCAAGCCACAGTACAACTTAACACTGTGACGTCTAAAAAAAAAGTGTATTTGCACAAGGAAAAAGGCTACAAGAATCATGTTATCATTAATGGAGATGATGAAGATGATGGGAGTTGGGTCGAGATCGAGTTGGGGGAGTTTTACGTTAATGATTCCGGGGACGGCGTCGTAGAGATGTGCTTGAAAGAAATTGAGAGCCAACATTTGAGAGGTGGTCTTGTTGTTGAGGGAATTCAACTTAAACCTAAATTGAAACTATAA

mRNA sequence

ATGAACAGAGCTTATGGATTAAACACTCACCCATCTCAAGCCACAGTACAACTTAACACTGTGACGTCTAAAAAAAAAGTGTATTTGCACAAGGAAAAAGGCTACAAGAATCATGTTATCATTAATGGAGATGATGAAGATGATGGGAGTTGGGTCGAGATCGAGTTGGGGGAGTTTTACGTTAATGATTCCGGGGACGGCGTCGTAGAGATGTGCTTGAAAGAAATTGAGAGCCAACATTTGAGAGGTGGTCTTGTTGTTGAGGGAATTCAACTTAAACCTAAATTGAAACTATAA

Coding sequence (CDS)

ATGAACAGAGCTTATGGATTAAACACTCACCCATCTCAAGCCACAGTACAACTTAACACTGTGACGTCTAAAAAAAAAGTGTATTTGCACAAGGAAAAAGGCTACAAGAATCATGTTATCATTAATGGAGATGATGAAGATGATGGGAGTTGGGTCGAGATCGAGTTGGGGGAGTTTTACGTTAATGATTCCGGGGACGGCGTCGTAGAGATGTGCTTGAAAGAAATTGAGAGCCAACATTTGAGAGGTGGTCTTGTTGTTGAGGGAATTCAACTTAAACCTAAATTGAAACTATAA

Protein sequence

MNRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKGYKNHVIINGDDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL

Homology

[Close]

BLAST of Lsi06G000680 vs. ExPASy Swiss-Prot
Match: Q9C7K0 (F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.6e-06
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 47  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK 96
           DDG W+EIELGEF   +  D  V M L E++   L+GG++++GI+++PK
Sbjct: 234 DDG-WMEIELGEFETREGEDDEVNMTLTEVKGYQLKGGILIDGIEVRPK 281

[Close]

BLAST of Lsi06G000680 vs. ExPASy Swiss-Prot
Match: Q9C7J9 (F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.4e-06
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 47  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP 95
           DDG W+EIELGEF   +  D  V M L E++   L+GG+V++GI+++P
Sbjct: 234 DDG-WLEIELGEFVTREGEDDEVNMSLTEVKGYQLKGGIVIDGIEVRP 280

[Close]

BLAST of Lsi06G000680 vs. ExPASy Swiss-Prot
Match: O80494 (F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2)

HSP 1 Score: 51.6 bits (122), Expect = 5.8e-06
Identity = 35/119 (29.41%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQ------------LNTVTSKKK-----VYLHKEKGYKNHVIINGD 61
           +RAYGL+  P++ +++            L+ + +KK+      Y  +E+    H ++   
Sbjct: 163 SRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQMERVFYGQREQRMATHEVVRSH 222

Query: 62  DED----DGSWVEIELGEFYVNDSGDG----VVEMCLKEIESQHLRGGLVVEGIQLKPK 96
             +    D  W+EIELGEF    SG+G     V M L E++   L+GG+ ++GI+++PK
Sbjct: 223 RREPEVRDDGWMEIELGEFETG-SGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPK 280

[Close]

BLAST of Lsi06G000680 vs. ExPASy Swiss-Prot
Match: Q9FLU7 (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.2e-04
Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 44  DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK 96
           +  +DG W+EIELGE+YV    D  +EM + E      +GG++V+GI+++PK
Sbjct: 199 ESREDG-WLEIELGEYYVG-FDDEEIEMSVLETREGGWKGGIIVQGIEIRPK 248

[Close]

BLAST of Lsi06G000680 vs. ExPASy Swiss-Prot
Match: Q6NPT8 (F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 4.2e-04
Identity = 19/58 (32.76%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 43  GDDEDDGSWVEIELGEFYVN-----DSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK 96
           G  E    W E+ELG+FY+N     D G   +E+ + E ++ + + GL+++GI+++P+
Sbjct: 276 GPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPE 333

[Close]

BLAST of Lsi06G000680 vs. ExPASy TrEMBL
Match: A0A0A0M1G3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568500 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.1e-35
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQLNT-VTSKKKVYLHKEKGYKNHVIINGD-----DED-DGSWVEI 61
           +RAYGLNTHPSQAT+QLNT VTSK+KVYLHK++ YKN +I  GD     DED D SW+EI
Sbjct: 95  DRAYGLNTHPSQATIQLNTAVTSKRKVYLHKQREYKNQIIFGGDNDHEIDEDNDDSWIEI 154

Query: 62  ELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL 99
           ELGEFYV+DSGD +VEMCLKE+ESQHLRGGLVVEGIQL+PKLKL
Sbjct: 155 ELGEFYVHDSGDSIVEMCLKEVESQHLRGGLVVEGIQLRPKLKL 198

[Close]

BLAST of Lsi06G000680 vs. ExPASy TrEMBL
Match: A0A1S3BQI2 (putative F-box protein PP2-B12 OS=Cucumis melo OX=3656 GN=LOC103492124 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 79/99 (79.80%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 2   NRAYGLNTHPSQAT-VQLNTVTSKKKVYLHKEKGYKNHVIING-DDEDDGSWVEIELGEF 61
           +RAYGLNTHPSQAT +QLNTVTSK+KVYLHK+KGYKN     G +++DD SW+EIELGEF
Sbjct: 167 DRAYGLNTHPSQATIIQLNTVTSKRKVYLHKQKGYKNQNNFGGVEEDDDDSWIEIELGEF 226

Query: 62  YVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL 99
           YV DS D VVEMCLKEIESQHLRGGLVVEGIQL+PKLKL
Sbjct: 227 YVYDSVDNVVEMCLKEIESQHLRGGLVVEGIQLRPKLKL 265

[Close]

BLAST of Lsi06G000680 vs. ExPASy TrEMBL
Match: A0A6J1DZC5 (putative F-box protein PP2-B12 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111025995 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.0e-30
Identity = 72/105 (68.57%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSW 61
           +RAYGLN HPSQA+VQLNTVTS+++VYL KE+G       KN V+  G D    EDD  W
Sbjct: 167 DRAYGLNNHPSQASVQLNTVTSQREVYLDKERGCNNGGLSKNRVVDRGSDDETEEDDCGW 226

Query: 62  VEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL 97
           V+IELGEFYVND GDG VEMCLKE+ESQHLRGGLVVEGIQL+P++
Sbjct: 227 VKIELGEFYVNDLGDGDVEMCLKEVESQHLRGGLVVEGIQLRPRM 271

[Close]

BLAST of Lsi06G000680 vs. ExPASy TrEMBL
Match: A0A6J1E2Z2 (putative F-box protein PP2-B12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111025995 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.0e-30
Identity = 72/105 (68.57%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSW 61
           +RAYGLN HPSQA+VQLNTVTS+++VYL KE+G       KN V+  G D    EDD  W
Sbjct: 168 DRAYGLNNHPSQASVQLNTVTSQREVYLDKERGCNNGGLSKNRVVDRGSDDETEEDDCGW 227

Query: 62  VEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL 97
           V+IELGEFYVND GDG VEMCLKE+ESQHLRGGLVVEGIQL+P++
Sbjct: 228 VKIELGEFYVNDLGDGDVEMCLKEVESQHLRGGLVVEGIQLRPRM 272

[Close]

BLAST of Lsi06G000680 vs. ExPASy TrEMBL
Match: A0A6J1JFV9 (F-box protein At2g02240-like OS=Cucurbita maxima OX=3661 GN=LOC111486502 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 71/102 (69.61%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQLNTVTSKKKVYLHK--EKGYKNHVIIN-GDDEDDG--SWVEIEL 61
           +RAYGL+THPSQA+VQL+ V SK+KVYL+       KN  I+N GDD ++G   WVEIEL
Sbjct: 167 DRAYGLDTHPSQASVQLDMVLSKRKVYLNNNGRGSNKNRAIVNGGDDREEGIDDWVEIEL 226

Query: 62  GEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL 99
           GEFYVND  DGVVEMCLKE+ESQHLRGGL+VEGIQL PK+KL
Sbjct: 227 GEFYVNDLEDGVVEMCLKEVESQHLRGGLIVEGIQLTPKIKL 268

[Close]

BLAST of Lsi06G000680 vs. NCBI nr
Match: XP_038878695.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 167.2 bits (422), Expect = 7.3e-38
Identity = 79/95 (83.16%), Postives = 89/95 (93.68%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKGYKNHVIINGDDEDDGSWVEIELGEFYV 61
           +RAYGLNTHPSQA+VQLNTV SK+KVYLHKEKGYK+ V I+GDD DD +WVEI+LGEFYV
Sbjct: 171 DRAYGLNTHPSQASVQLNTVISKRKVYLHKEKGYKDQVFIDGDDGDDDNWVEIKLGEFYV 230

Query: 62  NDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL 97
           NDSG+GVVEMCLKE+ESQHLRGGLVVEGIQL+P L
Sbjct: 231 NDSGEGVVEMCLKEVESQHLRGGLVVEGIQLRPNL 265

[Close]

BLAST of Lsi06G000680 vs. NCBI nr
Match: XP_004135585.1 (putative F-box protein PP2-B12 [Cucumis sativus] >KAE8653352.1 hypothetical protein Csa_007110 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 4.4e-35
Identity = 80/104 (76.92%), Postives = 91/104 (87.50%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQLNT-VTSKKKVYLHKEKGYKNHVIINGD-----DED-DGSWVEI 61
           +RAYGLNTHPSQAT+QLNT VTSK+KVYLHK++ YKN +I  GD     DED D SW+EI
Sbjct: 167 DRAYGLNTHPSQATIQLNTAVTSKRKVYLHKQREYKNQIIFGGDNDHEIDEDNDDSWIEI 226

Query: 62  ELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL 99
           ELGEFYV+DSGD +VEMCLKE+ESQHLRGGLVVEGIQL+PKLKL
Sbjct: 227 ELGEFYVHDSGDSIVEMCLKEVESQHLRGGLVVEGIQLRPKLKL 270

[Close]

BLAST of Lsi06G000680 vs. NCBI nr
Match: XP_008450565.1 (PREDICTED: putative F-box protein PP2-B12 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 2.9e-34
Identity = 79/99 (79.80%), Postives = 88/99 (88.89%), Query Frame = 0


Query: 2   NRAYGLNTHPSQAT-VQLNTVTSKKKVYLHKEKGYKNHVIING-DDEDDGSWVEIELGEF 61
           +RAYGLNTHPSQAT +QLNTVTSK+KVYLHK+KGYKN     G +++DD SW+EIELGEF
Sbjct: 167 DRAYGLNTHPSQATIIQLNTVTSKRKVYLHKQKGYKNQNNFGGVEEDDDDSWIEIELGEF 226

Query: 62  YVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKLKL 99
           YV DS D VVEMCLKEIESQHLRGGLVVEGIQL+PKLKL
Sbjct: 227 YVYDSVDNVVEMCLKEIESQHLRGGLVVEGIQLRPKLKL 265

[Close]

BLAST of Lsi06G000680 vs. NCBI nr
Match: XP_022159649.1 (putative F-box protein PP2-B12 isoform X1 [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 1.2e-29
Identity = 72/105 (68.57%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSW 61
           +RAYGLN HPSQA+VQLNTVTS+++VYL KE+G       KN V+  G D    EDD  W
Sbjct: 168 DRAYGLNNHPSQASVQLNTVTSQREVYLDKERGCNNGGLSKNRVVDRGSDDETEEDDCGW 227

Query: 62  VEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL 97
           V+IELGEFYVND GDG VEMCLKE+ESQHLRGGLVVEGIQL+P++
Sbjct: 228 VKIELGEFYVNDLGDGDVEMCLKEVESQHLRGGLVVEGIQLRPRM 272

[Close]

BLAST of Lsi06G000680 vs. NCBI nr
Match: XP_022159650.1 (putative F-box protein PP2-B12 isoform X2 [Momordica charantia])

HSP 1 Score: 139.8 bits (351), Expect = 1.2e-29
Identity = 72/105 (68.57%), Postives = 84/105 (80.00%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQLNTVTSKKKVYLHKEKG------YKNHVIINGDD----EDDGSW 61
           +RAYGLN HPSQA+VQLNTVTS+++VYL KE+G       KN V+  G D    EDD  W
Sbjct: 167 DRAYGLNNHPSQASVQLNTVTSQREVYLDKERGCNNGGLSKNRVVDRGSDDETEEDDCGW 226

Query: 62  VEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPKL 97
           V+IELGEFYVND GDG VEMCLKE+ESQHLRGGLVVEGIQL+P++
Sbjct: 227 VKIELGEFYVNDLGDGDVEMCLKEVESQHLRGGLVVEGIQLRPRM 271

[Close]

BLAST of Lsi06G000680 vs. TAIR 10
Match: AT1G56250.1 (phloem protein 2-B14 )

HSP 1 Score: 52.8 bits (125), Expect = 1.9e-07
Identity = 23/49 (46.94%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 47  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK 96
           DDG W+EIELGEF   +  D  V M L E++   L+GG++++GI+++PK
Sbjct: 234 DDG-WMEIELGEFETREGEDDEVNMTLTEVKGYQLKGGILIDGIEVRPK 281

[Close]

BLAST of Lsi06G000680 vs. TAIR 10
Match: AT1G56240.1 (phloem protein 2-B13 )

HSP 1 Score: 52.4 bits (124), Expect = 2.4e-07
Identity = 23/48 (47.92%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 47  DDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKP 95
           DDG W+EIELGEF   +  D  V M L E++   L+GG+V++GI+++P
Sbjct: 234 DDG-WLEIELGEFVTREGEDDEVNMSLTEVKGYQLKGGIVIDGIEVRP 280

[Close]

BLAST of Lsi06G000680 vs. TAIR 10
Match: AT1G09155.1 (phloem protein 2-B15 )

HSP 1 Score: 51.6 bits (122), Expect = 4.2e-07
Identity = 35/119 (29.41%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 2   NRAYGLNTHPSQATVQ------------LNTVTSKKK-----VYLHKEKGYKNHVIINGD 61
           +RAYGL+  P++ +++            L+ + +KK+      Y  +E+    H ++   
Sbjct: 163 SRAYGLDLVPAETSIKVGNGEKKIKSTYLSCLDNKKQQMERVFYGQREQRMATHEVVRSH 222

Query: 62  DED----DGSWVEIELGEFYVNDSGDG----VVEMCLKEIESQHLRGGLVVEGIQLKPK 96
             +    D  W+EIELGEF    SG+G     V M L E++   L+GG+ ++GI+++PK
Sbjct: 223 RREPEVRDDGWMEIELGEFETG-SGEGDDDKEVVMSLTEVKGYQLKGGIAIDGIEVRPK 280

[Close]

BLAST of Lsi06G000680 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05
Identity = 19/58 (32.76%), Postives = 36/58 (62.07%), Query Frame = 0


Query: 43  GDDEDDGSWVEIELGEFYVN-----DSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK 96
           G  E    W E+ELG+FY+N     D G   +E+ + E ++ + + GL+++GI+++P+
Sbjct: 276 GPKERVDGWSEVELGKFYINNGGCGDDGSDEIEISIMETQNGNWKSGLIIQGIEIRPE 333

[Close]

BLAST of Lsi06G000680 vs. TAIR 10
Match: AT5G24560.1 (phloem protein 2-B12 )

HSP 1 Score: 45.4 bits (106), Expect = 3.0e-05
Identity = 22/52 (42.31%), Postives = 35/52 (67.31%), Query Frame = 0


Query: 44  DDEDDGSWVEIELGEFYVNDSGDGVVEMCLKEIESQHLRGGLVVEGIQLKPK 96
           +  +DG W+EIELGE+YV    D  +EM + E      +GG++V+GI+++PK
Sbjct: 199 ESREDG-WLEIELGEYYVG-FDDEEIEMSVLETREGGWKGGIIVQGIEIRPK 248

The following BLAST results are available for this feature:

BLAST of Lsi06G000680 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7K0	2.6e-06	46.94	F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1	[more]
Q9C7J9	3.4e-06	47.92	F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1	[more]
O80494	5.8e-06	29.41	F-box protein PP2-B15 OS=Arabidopsis thaliana OX=3702 GN=PP2B15 PE=2 SV=2	[more]
Q9FLU7	4.2e-04	42.31	Putative F-box protein PP2-B12 OS=Arabidopsis thaliana OX=3702 GN=PP2B12 PE=4 SV...	[more]
Q6NPT8	4.2e-04	32.76	F-box protein PP2-B1 OS=Arabidopsis thaliana OX=3702 GN=PP2B1 PE=1 SV=1	[more]

BLAST of Lsi06G000680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M1G3	2.1e-35	76.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G568500 PE=4 SV=1	[more]
A0A1S3BQI2	1.4e-34	79.80	putative F-box protein PP2-B12 OS=Cucumis melo OX=3656 GN=LOC103492124 PE=4 SV=1	[more]
A0A6J1DZC5	6.0e-30	68.57	putative F-box protein PP2-B12 isoform X2 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1E2Z2	6.0e-30	68.57	putative F-box protein PP2-B12 isoform X1 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1JFV9	1.5e-28	69.61	F-box protein At2g02240-like OS=Cucurbita maxima OX=3661 GN=LOC111486502 PE=4 SV...	[more]

BLAST of Lsi06G000680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878695.1	7.3e-38	83.16	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_004135585.1	4.4e-35	76.92	putative F-box protein PP2-B12 [Cucumis sativus] >KAE8653352.1 hypothetical prot...	[more]
XP_008450565.1	2.9e-34	79.80	PREDICTED: putative F-box protein PP2-B12 [Cucumis melo]	[more]
XP_022159649.1	1.2e-29	68.57	putative F-box protein PP2-B12 isoform X1 [Momordica charantia]	[more]
XP_022159650.1	1.2e-29	68.57	putative F-box protein PP2-B12 isoform X2 [Momordica charantia]	[more]

BLAST of Lsi06G000680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G56250.1	1.9e-07	46.94	phloem protein 2-B14	[more]
AT1G56240.1	2.4e-07	47.92	phloem protein 2-B13	[more]
AT1G09155.1	4.2e-07	29.41	phloem protein 2-B15	[more]
AT2G02230.1	3.0e-05	32.76	phloem protein 2-B1	[more]
AT5G24560.1	3.0e-05	42.31	phloem protein 2-B12	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025886	Phloem protein 2-like	PFAM	PF14299	PP2	coord: 3..94 e-value: 9.5E-16 score: 58.2
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 2..95
None	No IPR available	PANTHER	PTHR32278:SF11	F-BOX PROTEIN	coord: 2..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi06G000680.1	Lsi06G000680.1	mRNA