Lsi06G000100 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi06G000100
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRNA helicase
Locationchr06: 101362 .. 109980 (-)
RNA-Seq ExpressionLsi06G000100
SyntenyLsi06G000100
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGCCACGAGATTTGGCGAATTGAAAAAAGTCTAGGGTTTATGGAATGAAAAATTATCCACACCCTGAAGCCCCCGATGATTTTAAAAAAGCACGGGACGTGTAAAAAATCCTCCCATATAATCGAAATATCTAAACCTTCACGGCTCTCTATATATATATATTCAACAAAGGAGTTTGGGGTAATATTGGTTGAATTGAGGGAAACGCAAAACCATATAGTCCATACGTTCTATCCTTATCGCTGGCTGTTTGATATTTGATAAAGCCCCCATAAACCCATCCTCTACTCTCCTCCAGTTCCTGATTCTTCTTCCATTGGGACTTTGAGCGAGTGCAAGCTGGCCAAGAAAAGCCTCGCAACTTAGTTTGCCACTGAAGAGAAGCTGAAAACAAGAAATGGCTTCCCTTCTCGGAGTTACTGCAATTCATCATGCACCAAATCTTGATATGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCATCTCTTTCTTTTGCCGATAAGTCCCACTTAATTGCTCTGAAAGCTCTAACTTGTTTCAGTGCTAGTAACCGTCGCAACTTGTCCGGATTTATCTCTTCTGCAATTGCGACTCCCAATTCCATCCTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAGACTCCTTGGACGATAATCTCATCGACTCTGAACCTAATTCATCTCTTGCATTCTCTGCTGCTCCTCCTGCTGACGATGATGAGCTCGCCATTTCCAAATTACACTTGCCCCAACGACTCACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAGTACTATCCCACTCTTGCTTTATTTTCTTCACCCCCCACCTCTTCCCCATTCAGACGCACTGCTTTAAGTATGAAGTTATGATTTTCTCCGTTCTCGTCCAGTATTTTTGTTCTGTTTGTTGAAGCTATTACTTAAAAATTCAATTATTATCTGTTCGCTTAAGTTTAAATTTCAAAATGTTACAGATGTGGGAAATGCTAACATGTAAAATCCACTGTGCAGAATTTTGAGCATGATGCATACCCCTGCTTGTTTAAGAATTTTCCATAACTAAATGTAGTTTTCTTTTAGGACTATATATTCATTTTATTCTTAAGTTAACCTTCCAGGTTATTTTAATTACACAAGGAGAAGTAATTTGCTTCGAACCTCAAATATGTTTCGTTACAAGATATTTGTTGTTGACCAATGTGATTAGTCAAGTCGTGTGATTGTATCTCTAATTATTTATTTATTTTTTCATTTGAAAAATGCAGAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTAGCCTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTCCCGGAGGTACGTTATTGTAACTTCCTAAAACCTTGTACCTAGAGATTTGTCTCAGAATTACTAACTTTTCAGTATTCGTTACAGGCGGTCACGTCTTCCAAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAAGAATCTGCACCTTATCTGAACACAGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGTCTCAATTTGGGGGAAGTCGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATTGATTTGGTAATCTTTTACATATTTTAACATCCTAATTAATTACCTAGTCTTCATATTTTTGACATTTGCATATTTTATTGTAATAAACCATTAAATTGTTGTGGAAAGATGCTTGCTCTTTGGATTATGGTGTACTGAAGAGATGAGCTAGGTTCTTTTTGTATGTTCTCTTTTTCATTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTCCACTTTTCAGTGATGTTTGGCATGCAATTTGAAGTTAATTTGGTTTGCATCTCCTATATGACAATGTTGTCATGACAAGCTAGTGTATGTGAAAAGGAAAAAATACCGTTTGTAATCTGAACGCCTAATGCAAGTTTTAAGGAATGAGACTCACTTTGGCGTTAGAAATTGCATTTAATTCTCCATATAAAGATCAATTCCTGTTAAGTAAAAATAATCATCCTGTATCAAATGTGTAGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTCCATGCCATATTAACTACTGCAACTTCAAAGCAAACCATTCTCAGAGATCTTGTAACAGTAAGAATTGAAGCATATCCTCCTTTCTTCAAACATTACAGACCAGTAATCTTGGGACTTATTCTTTTGTATGCTGCAACAGTAAAGCTGTTATTTGATGTCTTGTTAAGTGGTTGGTTTGAACATATTAGATTATCACTAATTCTTAAAGTTTAAACTTTTGGTAAAACAGCAAGTTCTTCTATTGAAAAACTAACTATCATTGAGAAACAAAGGAAAAACTAATTTCTTATATCTATAAATTCATAATATTCACCTCTAACATGAATTTTGGCTTAAAATCAATTAATTCCCTTCTCTTGGTTCGTTTTGATACGGAACATTTATGCTTGATCATGTATGTGTTTGTGTGTATATTCCTTTAATTTTTAAAAACCTGTATCTCACTTCATTCTAATGATACATTCGTTTTTGCTTTTTCTTACATCCGGACTACCTGCTGAGTTTAAGCCTTGTGCCCTTAAAACACTGGTATGCACATGAAAACGTTCTCATTCAGTCGTACCGGCATGGCCCCACTGATTTTTTTCGATATAAAATTTAGCCCGTCAGAAATATCTTTTATGAGATACTCTTTCGTCCATAATGGAATCCTTTCATTTTCTTGTGAACCATATTTATTTCAATGACTGATCCCCACAAAGAATGAGTCTAATAACATCATGATTTCAGGTTTATGCTAAGGGGGGCAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAATTCACTGTGTTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTACTTTCATTTGGACTGTATTCTGATCAATGCCAATTTCTTTTGCTCTTGTTCAATGTGAAACTTTTACACCAACACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN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mRNA sequence

GAAGCCACGAGATTTGGCGAATTGAAAAAAGTCTAGGGTTTATGGAATGAAAAATTATCCACACCCTGAAGCCCCCGATGATTTTAAAAAAGCACGGGACGTGTAAAAAATCCTCCCATATAATCGAAATATCTAAACCTTCACGGCTCTCTATATATATATATTCAACAAAGGAGTTTGGGGTAATATTGGTTGAATTGAGGGAAACGCAAAACCATATAGTCCATACGTTCTATCCTTATCGCTGGCTGTTTGATATTTGATAAAGCCCCCATAAACCCATCCTCTACTCTCCTCCAGTTCCTGATTCTTCTTCCATTGGGACTTTGAGCGAGTGCAAGCTGGCCAAGAAAAGCCTCGCAACTTAGTTTGCCACTGAAGAGAAGCTGAAAACAAGAAATGGCTTCCCTTCTCGGAGTTACTGCAATTCATCATGCACCAAATCTTGATATGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCATCTCTTTCTTTTGCCGATAAGTCCCACTTAATTGCTCTGAAAGCTCTAACTTGTTTCAGTGCTAGTAACCGTCGCAACTTGTCCGGATTTATCTCTTCTGCAATTGCGACTCCCAATTCCATCCTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAGACTCCTTGGACGATAATCTCATCGACTCTGAACCTAATTCATCTCTTGCATTCTCTGCTGCTCCTCCTGCTGACGATGATGAGCTCGCCATTTCCAAATTACACTTGCCCCAACGACTCACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTAGCCTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTCCCGGAGGCGGTCACGTCTTCCAAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAAGAATCTGCACCTTATCTGAACACAGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGTCTCAATTTGGGGGAAGTCGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATTGATTTGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTCCATGCCATATTAACTACTGCAACTTCAAAGCAAACCATTCTCAGAGATCTTGTAACAGTTTATGCTAAGGGGGGCAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAATTCACTGTGTTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTTATCCACTATGAACTTCCTAATGATCCCGAGACTTTTGTACATCGCTCTGGCCGTACTGGACGTGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGGTGCAAATTTGAGTTTGCAAATCCACCTGCCATTGAGGAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGTGGAGTTCATCCTGAATCTATTGAGTTTTTCATTCCAACTGCACAGAAGTTAATTGATGAACAAGGACCAGGTGCTCTGGCGGCTGCACTTGCACAATTAAGTGGGTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCTCGAGGGTTTTTGTCTGCTAGGTCTGTCACTGGATTTCTGTCTGACATTTATTCCCCAGCCGCAGATGAAGTTGGAAAAATACATCTAATTGCAGATGAAAGGATAAATGGAGCAGTATTTGATCTTCCAGAGGAAATAGCAAAAGAGTTGCTGAATAAGGAACTGCCAGAAGGAAATACTATTTTGAAGGTCACGAAGAATGTTGGAACATGTTCCATACTTCGTCTTTTGCAGTTACCTCCTCTGCAAGATGATGGCCCACCAAGTGACAACTATGGAAGATTTTCTAGCAGAGAAAGAAATAGCCGAAATAGCTCTAGAGATCGCAGAGGTTATAGAACATCAAGGGGCTGGGGCAGCAGTCGAGACTCTGATGATGATGACGATCAAGCAGGTCATCATCCGTGGATAGATTTGGAGGCTCCTGTTTTAATTGCGGAAGGATGGGGCACAGGGCATCAGAATGCCCTGACAAGTGATAAGCAAGACGACTAAATATACTTGATCAGCTTCTAGTTATTGTGGCGACTCACATGTAGGTTTCTGGGTTCAGCTAAGTTGCATTATCTTTACATTCAGTGGCTGGTATTTAGGTCTCGAAGATGCTGCTTGAAAGAGTTACAGGAATGGCGCTCAGTCTCATGTTTAGCATTACAAGATTACTTTTACAATGTTTGCAACATTCTCAGTCTGTTCTAATTTAAGTTTTGCGCAGTGAGGCATTCAAAATTGATTCGTCATGTTGGATACTCTTTTTCAACCCCCCATGTAGAATGTATATGTTTCAGAAGAATGAAGAAATGAAAACAGCATAGCATTCCATTGGTTATAACTTGATTTACTAATTCGCGGGAACAGTGCTGGTTCTCTATGATATGGAGTCTCTTTAGCTAATTTGAGGATCACGGTTCTTCACTTACAGTGTAAACGAAATTATATGTCATCTACGAAGAGGGTGAAGCATCAAAGAACACCCAATCTATTGTGGAAGTCCAGGGGCTGTTTTCTGGCAGCAGGTTTGTATCATACAGATCTTGAATCAATCCTATTGGCCAGCAAGCAATTTCGTTGTATACAAATACGATTAAGATTGTTCCTACGACCTACAATAAAGTCTATTCGTTTTGGGC

Coding sequence (CDS)

ATGGCTTCCCTTCTCGGAGTTACTGCAATTCATCATGCACCAAATCTTGATATGTACAGAAGGATGGGAACAACGGCGACGGCATCACCGACGCCATCTCTTTCTTTTGCCGATAAGTCCCACTTAATTGCTCTGAAAGCTCTAACTTGTTTCAGTGCTAGTAACCGTCGCAACTTGTCCGGATTTATCTCTTCTGCAATTGCGACTCCCAATTCCATCCTCAGCGAAGAGGCTTTTAGAAGTCTCGATGGCTTCTCTAAAGACTCCTTGGACGATAATCTCATCGACTCTGAACCTAATTCATCTCTTGCATTCTCTGCTGCTCCTCCTGCTGACGATGATGAGCTCGCCATTTCCAAATTACACTTGCCCCAACGACTCACGGATGCTCTTCAGAAGCGTGGGATTACCCACCTCTTCCCCATTCAAAGAGCTGTTCTTGTCCCTGCATTAGAAGGTCGAGACCTCATTGCCCGTGCAAAGACTGGTACTGGGAAGACATTAGCCTTTGGGATACCAATTCTTAAAAAACTCACTGAAGATGATGAATCAAGAAGTTCCCGGAGGCGGTCACGTCTTCCAAGAGTTTTGGTGTTAACTCCCACCAGGGAACTAGCCAAACAAGTGGAAAAAGAGATTAAAGAATCTGCACCTTATCTGAACACAGTTTGCGTTTATGGAGGAGTTTCATATGTTACACAGCAAAATGCTCTTTCTCGTGGAGTTGATGTGGTAGTTGGAACACCTGGTCGAATAATAGACCTAATAAATGGTAACAGTCTCAATTTGGGGGAAGTCGAATATTTAGTATTAGATGAAGCAGATCAGATGCTTGCTGTTGGGTTTGAGGAGGATGTGGAAGTAATTTTAGAAAAGCTTCCATCTCAGCGACAAAACATGCTTTTCTCTGCTACTATGCCAACGTGGGTTAAGAAACTTGCACGCAAATATTTGGAAAATCCATTGACCATTGATTTGGTTGGCGACCAAGATGAAAAGCTTGCTGAGGGGATCAAACTCCATGCCATATTAACTACTGCAACTTCAAAGCAAACCATTCTCAGAGATCTTGTAACAGTTTATGCTAAGGGGGGCAAGACCATTGTTTTTACTCAGACAAAACGTGATGCTGATGAAGTCTCTTTGGCATTAGCTAATAGCATAACATCAGAAGCATTGCATGGAGATATATCACAGCATCAACGGGAAAGAACATTAAATGGCTTTCGGCAAGGGAAATTCACTGTGTTGGTTGCAACTGATGTAGCTTCACGAGGACTGGATATCCCAAATGTTGATTTGGTTATCCACTATGAACTTCCTAATGATCCCGAGACTTTTGTACATCGCTCTGGCCGTACTGGACGTGCAGGAAAAGAGGGTACTGCCATTTTAATGTTTACAAATAGTCAAAGGAGAACAGTTAGATCACTTGAGCGTGATGTGGGGTGCAAATTTGAGTTTGCAAATCCACCTGCCATTGAGGAGGTTCTAGAATCATCAGCTGAGCAAGTGGTTGTTACTCTTCGTGGAGTTCATCCTGAATCTATTGAGTTTTTCATTCCAACTGCACAGAAGTTAATTGATGAACAAGGACCAGGTGCTCTGGCGGCTGCACTTGCACAATTAAGTGGGTTCTCCCATCCTCCTTCATCACGGTCACTTATTAACCACGAACAGGGATGGGTGACATTGCAGCTGACCAGGGATCCATCTTATTCTCGAGGGTTTTTGTCTGCTAGGTCTGTCACTGGATTTCTGTCTGACATTTATTCCCCAGCCGCAGATGAAGTTGGAAAAATACATCTAATTGCAGATGAAAGGATAAATGGAGCAGTATTTGATCTTCCAGAGGAAATAGCAAAAGAGTTGCTGAATAAGGAACTGCCAGAAGGAAATACTATTTTGAAGGTCACGAAGAATGTTGGAACATGTTCCATACTTCGTCTTTTGCAGTTACCTCCTCTGCAAGATGATGGCCCACCAAGTGACAACTATGGAAGATTTTCTAGCAGAGAAAGAAATAGCCGAAATAGCTCTAGAGATCGCAGAGGTTATAGAACATCAAGGGGCTGGGGCAGCAGTCGAGACTCTGATGATGATGACGATCAAGCAGGTCATCATCCGTGGATAGATTTGGAGGCTCCTGTTTTAATTGCGGAAGGATGGGGCACAGGGCATCAGAATGCCCTGACAAGTGATAAGCAAGACGACTAA

Protein sequence

MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLSGFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDGPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDDQAGHHPWIDLEAPVLIAEGWGTGHQNALTSDKQDD
Homology
[Close]
BLAST of Lsi06G000100 vs. ExPASy Swiss-Prot
Match: Q8L7S8 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RH3 PE=1 SV=2)

HSP 1 Score: 911.0 bits (2353), Expect = 8.8e-264
Identity = 503/708 (71.05%), Postives = 573/708 (80.93%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MAS +GV +++  P+L++ +    +   S   SLS  DK     L  +      +  +L 
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLSL-DKPFFTPLSLVRRTRRIHSSSL- 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
             + SA+ATPNS+LSEEAF+SL     D  D   +D + N+  A       D +ELAISK
Sbjct: 61  -LVPSAVATPNSVLSEEAFKSLGLSDHDEYD---LDGDNNNVEA------DDGEELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE
Sbjct: 121 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 180

Query: 181 DDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
           +    ++ RRS RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+
Sbjct: 181 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALT 240

Query: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
           RGVDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+
Sbjct: 241 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 300

Query: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
           MLFSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T
Sbjct: 301 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 360

Query: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420
           VYAKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVA
Sbjct: 361 VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 420

Query: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480
           TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLE
Sbjct: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLE 480

Query: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAA 540
           RDVGC FEF +PP + ++LESSA+QVV TL GVHP+SI+FF  TAQKL +E+G  ALAAA
Sbjct: 481 RDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAA 540

Query: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600
           LA LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADEVG
Sbjct: 541 LAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVG 600

Query: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDD 660
           KI LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TK            LPPLQDD
Sbjct: 601 KIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITK------------LPPLQDD 660

Query: 661 GPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDD---DDDQ 705
           GP SDNYGRFSSR+R  R      RG R  RG GSSR  D    DDD+
Sbjct: 661 GPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDR 680

[Close]
BLAST of Lsi06G000100 vs. ExPASy Swiss-Prot
Match: Q0DM51 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0827700 PE=2 SV=2)

HSP 1 Score: 898.7 bits (2321), Expect = 4.5e-260
Identity = 480/678 (70.80%), Postives = 549/678 (80.97%), Query Frame = 0 

Query: 28  ASPTPSLSFADKSHLIALKALTCFSASNRRNLSG---FISSAIATPNSILSEEAFRSLDG 87
           ++P+ S + A      +L+    F     R   G     + AIA+PNS+LSE AF+ L  
Sbjct: 13  SNPSASAAAAGAGAAPSLRLRAAFRCWALRRAGGGRWAAAGAIASPNSVLSEHAFKRLQL 72

Query: 88  FSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISKLHLPQRLTDALQKRGITHLFPIQR 147
             ++  ++          +        D+DELAI++L LP++L   L+KRGITHLFPIQR
Sbjct: 73  SDEEEEEEEGAYGSDEEGVEAVGGGEGDEDELAIARLGLPEQLVSTLEKRGITHLFPIQR 132

Query: 148 AVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRE 207
           AVL+PAL+GRDLIARAKTGTGKTLAFGIP++K+L E+D+ RS  RR R+PRVLVL PTRE
Sbjct: 133 AVLIPALDGRDLIARAKTGTGKTLAFGIPMIKQLMEEDDGRSV-RRGRIPRVLVLAPTRE 192

Query: 208 LAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLG 267
           LAKQVEKEIKESAP L+TVCVYGGVSY  QQNALSRGVDVVVGTPGRIIDLING SL LG
Sbjct: 193 LAKQVEKEIKESAPKLSTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLG 252

Query: 268 EVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTI 327
           EV+YLVLDEADQMLAVGFEEDVE IL++LP++RQ+MLFSATMP WVKKL+R+YL NPLTI
Sbjct: 253 EVKYLVLDEADQMLAVGFEEDVETILQQLPAERQSMLFSATMPGWVKKLSRRYLNNPLTI 312

Query: 328 DLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLAL 387
           DLVGDQDEKLAEGIKL+AI  T+TSK+T+L DL+TVYAKGGKTIVFT+TKRDADEVSLAL
Sbjct: 313 DLVGDQDEKLAEGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLAL 372

Query: 388 ANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDP 447
            NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDP
Sbjct: 373 TNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDP 432

Query: 448 ETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQ 507
           ETFVHRSGRTGRAGK GTAILMFTNSQRRTVRSLERDVGC+F+F +PPAIE+VLESSAE 
Sbjct: 433 ETFVHRSGRTGRAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEH 492

Query: 508 VVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVT 567
           V+ TLRGVH ESI++FIP A++L +E GP ALA+ALA LSGFS PPSSRSLI+HEQGWVT
Sbjct: 493 VIATLRGVHTESIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVT 552

Query: 568 LQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKEL 627
           LQLTRDP Y RGF S RSVTGFLSD+ S AADEVGKI L ADE++ GAVFDLPEEIA++L
Sbjct: 553 LQLTRDPGYGRGFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDL 612

Query: 628 LNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDGPPSDNYGRFSSRERNSRNSSRDRR 687
           L+ ELP GNTI KVTK            LP LQDDGP +D+YGRFS+ +R  RN  R R 
Sbjct: 613 LSMELPPGNTITKVTK------------LPALQDDGPATDSYGRFSNSDRGFRN-RRSRG 672

Query: 688 GYRTSRGWGSSRDSDDDD 703
           G   SRG     DSD +D
Sbjct: 673 G--GSRGGRGGWDSDGED 674

[Close]
BLAST of Lsi06G000100 vs. ExPASy Swiss-Prot
Match: A0A1D6GDY8 (DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3A PE=3 SV=1)

HSP 1 Score: 881.3 bits (2276), Expect = 7.5e-255
Identity = 479/693 (69.12%), Postives = 548/693 (79.08%), Query Frame = 0 

Query: 32  PSLSF---ADKSHLIALKALTCFSASNRRNLSGFISSAIATPNSILSEEAFRSLDGFSKD 91
           P+++F   A  S  + L+A   F     R     +++A+A+PNS+LSE AF+ L   S D
Sbjct: 8   PAIAFSNPATASGAVRLRA-AAFRCWALRRRGWAVAAAVASPNSVLSEHAFKRLQLGSDD 67

Query: 92  SLDDNLIDSEPNSSLAFSAAPPADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLV 151
             ++    S+ +           D++ELAI++L LP  L   L+KRGITHLFPIQRAVL+
Sbjct: 68  EDEEGPYGSDADEGF------QGDEEELAIARLGLPDELVATLEKRGITHLFPIQRAVLI 127

Query: 152 PALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQ 211
           PAL GRDLIARAKTGTGKTLAFGIP++K+L E D+ RS+ RR R PRVLVL PTRELAKQ
Sbjct: 128 PALGGRDLIARAKTGTGKTLAFGIPMIKQLMEQDDGRST-RRGRTPRVLVLAPTRELAKQ 187

Query: 212 VEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEY 271
           VEKEIKESAP L TVCVYGGVSY  QQNALSRGVDVVVGTPGRIIDLING SL LGEV+Y
Sbjct: 188 VEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVDVVVGTPGRIIDLINGGSLQLGEVQY 247

Query: 272 LVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVG 331
           LVLDEADQMLAVGFEEDVE IL++LP+ RQ+MLFSATMP+WVKKL+R+YL NPLTIDLVG
Sbjct: 248 LVLDEADQMLAVGFEEDVETILQQLPADRQSMLFSATMPSWVKKLSRRYLNNPLTIDLVG 307

Query: 332 DQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSI 391
           DQDEKLAEGIKLHAI  TATSK+TIL DL+TVYAKGGKTIVFT+TK+DADEVSLAL  SI
Sbjct: 308 DQDEKLAEGIKLHAIPLTATSKRTILSDLITVYAKGGKTIVFTRTKKDADEVSLALTTSI 367

Query: 392 TSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFV 451
            SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFV
Sbjct: 368 ASEALHGDISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFV 427

Query: 452 HRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVT 511
           HRSGRTGRAGK GTAILMFT+SQ+RTV SLERDVGCKFEF +PP+IEEVLESSAE V+ T
Sbjct: 428 HRSGRTGRAGKAGTAILMFTSSQKRTVMSLERDVGCKFEFISPPSIEEVLESSAEHVIAT 487

Query: 512 LRGVHPESIEFFIPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLT 571
           LRGVHPES ++F+  A+KL +E GP ALA+ALA LSGFS PPSSRSLI++EQGWVTLQLT
Sbjct: 488 LRGVHPESTQYFLGAAEKLTEELGPHALASALAHLSGFSQPPSSRSLISYEQGWVTLQLT 547

Query: 572 RDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKE 631
           R+P Y RGF S RSVTGFLSD+ S AADEVGKI++ ADE + GAVFDLPEEIAK+LL  E
Sbjct: 548 REPGYGRGFFSPRSVTGFLSDVCSAAADEVGKIYITADENVQGAVFDLPEEIAKDLLTME 607

Query: 632 LPEGNTILKVTKNVGTCSILRLLQLPPLQDDGPPSDNYGRFS----SRERNSR--NSSRD 691
           +P GNT+ K++K            LP LQDD P +D+YGRFS    SR R SR   +SR 
Sbjct: 608 VPPGNTLTKISK------------LPALQDDSPATDSYGRFSNDRGSRNRRSRGGGASRG 667

Query: 692 RRGY---------RTSRGWGSSRDSDDDDDQAG 707
           R G+         R  R   S  DS  DDD +G
Sbjct: 668 RGGWDTDSEDRYRRGGRSLRSDNDSWSDDDWSG 680

[Close]
BLAST of Lsi06G000100 vs. ExPASy Swiss-Prot
Match: A0A1D6LAB7 (DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3B PE=2 SV=1)

HSP 1 Score: 879.8 bits (2272), Expect = 2.2e-254
Identity = 467/639 (73.08%), Postives = 531/639 (83.10%), Query Frame = 0 

Query: 64  SSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISKLHL 123
           + A+A+PNS+LSE AF+ L   S D   +    S+ +       A   D++ELAI++L L
Sbjct: 39  AGALASPNSVLSEHAFKRLQLGSDDEDGEGPYGSDADEGF---EAGEGDNEELAIARLGL 98

Query: 124 PQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDE 183
           P  L   L+KRGITHLFPIQRAVL+PALEGRDLIARAKTGTGKTLAFGIP++K+L E D+
Sbjct: 99  PDELVATLEKRGITHLFPIQRAVLIPALEGRDLIARAKTGTGKTLAFGIPMIKQLIEQDD 158

Query: 184 SRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVD 243
            R + RR R PRVLVL PTRELAKQVEKEIKESAP L TVCVYGGVSY  QQNALSRGVD
Sbjct: 159 GRIT-RRGRTPRVLVLAPTRELAKQVEKEIKESAPKLGTVCVYGGVSYNVQQNALSRGVD 218

Query: 244 VVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFS 303
           VVVGTPGRIIDLING SL LGEV+YLVLDEADQMLAVGFEEDVE IL++LP+ RQ+MLFS
Sbjct: 219 VVVGTPGRIIDLINGGSLQLGEVQYLVLDEADQMLAVGFEEDVETILQQLPAGRQSMLFS 278

Query: 304 ATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAK 363
           ATMP+WVKKL+R+YL NPLTIDLVGDQDEKLAEGIKL+AI  T TSK+T+L DL+TVYAK
Sbjct: 279 ATMPSWVKKLSRRYLNNPLTIDLVGDQDEKLAEGIKLYAIPLTTTSKRTVLSDLITVYAK 338

Query: 364 GGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVA 423
           GGKTIVFT+TK+DADEVSLAL NSI SEALHGDISQHQRERTLNGFRQGKFTVLVATDVA
Sbjct: 339 GGKTIVFTRTKKDADEVSLALTNSIASEALHGDISQHQRERTLNGFRQGKFTVLVATDVA 398

Query: 424 SRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVG 483
           +RGLDIPNVDL+IHYELPNDPETFVHRSGRTGRAGK GTAILMFT+SQ+RTV+SLERDVG
Sbjct: 399 ARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKAGTAILMFTSSQKRTVKSLERDVG 458

Query: 484 CKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAALAQL 543
           C FEF +PP+IEEVLESSAE V+ TLRGVHPES ++F+  A+KL +E GP ALA+ALA L
Sbjct: 459 CNFEFISPPSIEEVLESSAEHVIATLRGVHPESTKYFLGAAEKLTEELGPHALASALAHL 518

Query: 544 SGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHL 603
           SGFS PPSSRSLI+HEQGWVTLQLTR+  + RGF S RSVTGFLSD+ S AADEVGKI+L
Sbjct: 519 SGFSQPPSSRSLISHEQGWVTLQLTREQGFGRGFFSPRSVTGFLSDVCSAAADEVGKIYL 578

Query: 604 IADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDGPPS 663
            ADE + GAVFDLPEEIAK+LL  ELP GNT+ K++K            LP LQDDGP +
Sbjct: 579 TADENVQGAVFDLPEEIAKDLLTMELPPGNTLTKISK------------LPALQDDGPAT 638

Query: 664 DNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDD 703
           D+YGRFS+ +R SRN+ R R G   SRG G   D+D +D
Sbjct: 639 DSYGRFSN-DRGSRNNRRSRGG-GASRGRG-GWDTDGED 658

[Close]
BLAST of Lsi06G000100 vs. ExPASy Swiss-Prot
Match: Q9LUW5 (DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RH53 PE=1 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 6.8e-131
Identity = 238/392 (60.71%), Postives = 298/392 (76.02%), Query Frame = 0 

Query: 114 DELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 173
           D LAIS+L +   +  AL  +GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIP
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161

Query: 174 ILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 233
           I+ K+    +  +   R R P  LVL PTRELA+QVEKE +ESAP L+T+C+YGG     
Sbjct: 162 IIDKII---KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQ 221

Query: 234 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 293
           Q   L  GVDV VGTPGR+IDL+   +LNL EV+++VLDEADQML VGF EDVE+ILEKL
Sbjct: 222 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 281

Query: 294 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 353
           P +RQ+M+FSATMP+W++ L +KYL NPLT+DLVGD D+KLA+GI  ++I+  +  + +I
Sbjct: 282 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 341

Query: 354 LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 413
           +  LVT +AKGGK IVFTQTKRDAD +S ALA S   EALHGDISQ QRERTL GFR G 
Sbjct: 342 IGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGH 401

Query: 414 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 473
           F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++  Q R
Sbjct: 402 FNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSR 461

Query: 474 TVRSLERDVGCKFEFANPPAIEEVLESSAEQV 506
            V+ +ER+VG +F      A+E    S  E +
Sbjct: 462 AVKIIEREVGSRFTELPSIAVERGSASMFEGI 490

[Close]
BLAST of Lsi06G000100 vs. ExPASy TrEMBL
Match: A0A5D3CJA2 (RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004730 PE=3 SV=1)

HSP 1 Score: 1304.3 bits (3374), Expect = 0.0e+00
Identity = 691/781 (88.48%), Postives = 704/781 (90.14%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSF DKSHLIALK  TCFS S+RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
           GF SSAIATPNSILSEEAFRSLDGFSKD LDDNLID EPNSSLAFS    ADDDELAISK
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFS----ADDDELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180

Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
           DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240

Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
           GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300

Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
           LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360

Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
           YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420

Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
           DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480

Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
           DVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+F PTAQKLIDEQGPGALAAAL
Sbjct: 481 DVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAAL 540

Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
           AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADE+GK
Sbjct: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGK 600

Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
           IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK            LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK------------LPPLQDDG 660

Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD----------------- 720
           PPSDNYGRFS RERNSRNSSRDRRG+RTSRGWGSSRDSDDD D                 
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRN 720

Query: 721 -QAGHHPWI-------------------------DLEAPVLIAEGWGTGHQNALTSDKQD 739
            ++    W+                         +L APVL AEGW TGHQNALTSDKQD
Sbjct: 721 FRSSGDDWLIGGRRSSRSSSVDRRLEPVSFTHLGNLAAPVLTAEGWDTGHQNALTSDKQD 765

[Close]
BLAST of Lsi06G000100 vs. ExPASy TrEMBL
Match: A0A1S3BQ06 (RNA helicase OS=Cucumis melo OX=3656 GN=LOC103492086 PE=3 SV=1)

HSP 1 Score: 1277.3 bits (3304), Expect = 0.0e+00
Identity = 667/703 (94.88%), Postives = 676/703 (96.16%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSF DKSHLIALK  TCFS S+RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
           GF SSAIATPNSILSEEAFRSLDGFSKD LDDNLID EPNSSLAFS    ADDDELAISK
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFS----ADDDELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180

Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
           DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240

Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
           GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300

Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
           LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360

Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
           YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420

Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
           DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480

Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
           DVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+F PTAQKLIDEQGPGALAAAL
Sbjct: 481 DVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAAL 540

Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
           AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADE+GK
Sbjct: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGK 600

Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
           IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK            LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK------------LPPLQDDG 660

Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
           PPSDNYGRFS RERNSRNSSRDRRG+RTSRGWGSSRDSDDD D
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGD 687

[Close]
BLAST of Lsi06G000100 vs. ExPASy TrEMBL
Match: A0A0A0M1E9 (RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G560830 PE=3 SV=1)

HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 653/703 (92.89%), Postives = 671/703 (95.45%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MASLLGVTAI HAPNLD+YRR GTTATASPTPSLSF DKSHLIALK  TCFS S+RRNLS
Sbjct: 1   MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
           GF SSAIATPNSILSEEAFRS DGFS+DSLDDNLID EPNSSLAF+    ADDDELAISK
Sbjct: 61  GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFA----ADDDELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180

Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
           DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSR 240

Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
           GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300

Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
           LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360

Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
           YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420

Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
           DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480

Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
           DVGCKFEFANPP +EEVL+SSAEQVVVTLRGVHPESIE+F PTAQKLIDEQG GALAAAL
Sbjct: 481 DVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGALAAAL 540

Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
           AQLSGF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADE+GK
Sbjct: 541 AQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEIGK 600

Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
           IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILK+TK            LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITK------------LPPLQDDG 660

Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
           PPSDNYGRFS RER+SRNSSRDRRG +TSRGWGSSRDSDD+ D
Sbjct: 661 PPSDNYGRFSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGD 687

[Close]
BLAST of Lsi06G000100 vs. ExPASy TrEMBL
Match: A0A6J1DXX8 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1)

HSP 1 Score: 1215.7 bits (3144), Expect = 0.0e+00
Identity = 640/715 (89.51%), Postives = 664/715 (92.87%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNL- 60
           MAS+LGVTAIHHAPNLD+YRRMGT AT SPTPSLSFADKSH+ A KA T FS+ +RRNL 
Sbjct: 1   MASILGVTAIHHAPNLDIYRRMGTAATPSPTPSLSFADKSHINASKAQTSFSSGSRRNLA 60

Query: 61  -----------SGFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAA 120
                      SGF SSAIATPNSILSEEAF+SLDGFSK    D+ IDS+PNSSL FSA 
Sbjct: 61  FSDGSSAGTFKSGFSSSAIATPNSILSEEAFKSLDGFSK----DDFIDSQPNSSLGFSAD 120

Query: 121 PPADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180
            PAD+DELAISKL LPQRLT++L+KRGIT LFPIQRAVLVPALEGRDLIARAKTGTGKTL
Sbjct: 121 SPADEDELAISKLGLPQRLTESLEKRGITSLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180

Query: 181 AFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240
           AFGIPI+K+LTEDDE RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 181 AFGIPIIKRLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240

Query: 241 VSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300
           VSYVTQQNAL+RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV
Sbjct: 241 VSYVTQQNALTRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300

Query: 301 ILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTAT 360
           IL+KLP+QRQNMLFSATMPTWVKKLARKYLENPLTIDLVG QDEKLAEGIKL+AILTTAT
Sbjct: 301 ILQKLPTQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGXQDEKLAEGIKLYAILTTAT 360

Query: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
           SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVV TLRGVHPESIEFF PTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEDVLESSAEQVVATLRGVHPESIEFFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQG GALAAALAQLSGFSHPPSSRSLI+HEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGAGALAAALAQLSGFSHPPSSRSLISHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSIL 660
           DIYSPAADEVGKIHLIADERI+GAVFDLPEEIAKELLNK LPEGNTILKVTK        
Sbjct: 601 DIYSPAADEVGKIHLIADERIHGAVFDLPEEIAKELLNKPLPEGNTILKVTK-------- 660

Query: 661 RLLQLPPLQDDGPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
               LPPLQDDGPPSDNYGRFS RERNSRN+SRDRRG+RTSRGWGS RDSDDD D
Sbjct: 661 ----LPPLQDDGPPSDNYGRFSGRERNSRNNSRDRRGFRTSRGWGSGRDSDDDGD 699

[Close]
BLAST of Lsi06G000100 vs. ExPASy TrEMBL
Match: A0A6J1DUC8 (RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1)

HSP 1 Score: 1215.7 bits (3144), Expect = 0.0e+00
Identity = 640/715 (89.51%), Postives = 664/715 (92.87%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNL- 60
           MAS+LGVTAIHHAPNLD+YRRMGT AT SPTPSLSFADKSH+ A KA T FS+ +RRNL 
Sbjct: 1   MASILGVTAIHHAPNLDIYRRMGTAATPSPTPSLSFADKSHINASKAQTSFSSGSRRNLA 60

Query: 61  -----------SGFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAA 120
                      SGF SSAIATPNSILSEEAF+SLDGFSK    D+ IDS+PNSSL FSA 
Sbjct: 61  FSDGSSAGTFKSGFSSSAIATPNSILSEEAFKSLDGFSK----DDFIDSQPNSSLGFSAD 120

Query: 121 PPADDDELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180
            PAD+DELAISKL LPQRLT++L+KRGIT LFPIQRAVLVPALEGRDLIARAKTGTGKTL
Sbjct: 121 SPADEDELAISKLGLPQRLTESLEKRGITSLFPIQRAVLVPALEGRDLIARAKTGTGKTL 180

Query: 181 AFGIPILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240
           AFGIPI+K+LTEDDE RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG
Sbjct: 181 AFGIPIIKRLTEDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGG 240

Query: 241 VSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300
           VSYVTQQNAL+RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV
Sbjct: 241 VSYVTQQNALTRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEV 300

Query: 301 ILEKLPSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTAT 360
           IL+KLP+QRQNMLFSATMPTWVKKLARKYLENPLTIDLVG QDEKLAEGIKL+AILTTAT
Sbjct: 301 ILQKLPTQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGXQDEKLAEGIKLYAILTTAT 360

Query: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420
           SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG
Sbjct: 361 SKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNG 420

Query: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFT 480
           FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILMFT
Sbjct: 421 FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMFT 480

Query: 481 NSQRRTVRSLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLI 540
           NSQRRTVRSLERDVGCKFEFANPPAIE+VLESSAEQVV TLRGVHPESIEFF PTAQKLI
Sbjct: 481 NSQRRTVRSLERDVGCKFEFANPPAIEDVLESSAEQVVATLRGVHPESIEFFTPTAQKLI 540

Query: 541 DEQGPGALAAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600
           DEQG GALAAALAQLSGFSHPPSSRSLI+HEQGWVTLQLTRDPSYSRGFLSARSVTGFLS
Sbjct: 541 DEQGAGALAAALAQLSGFSHPPSSRSLISHEQGWVTLQLTRDPSYSRGFLSARSVTGFLS 600

Query: 601 DIYSPAADEVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSIL 660
           DIYSPAADEVGKIHLIADERI+GAVFDLPEEIAKELLNK LPEGNTILKVTK        
Sbjct: 601 DIYSPAADEVGKIHLIADERIHGAVFDLPEEIAKELLNKPLPEGNTILKVTK-------- 660

Query: 661 RLLQLPPLQDDGPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
               LPPLQDDGPPSDNYGRFS RERNSRN+SRDRRG+RTSRGWGS RDSDDD D
Sbjct: 661 ----LPPLQDDGPPSDNYGRFSGRERNSRNNSRDRRGFRTSRGWGSGRDSDDDGD 699

[Close]
BLAST of Lsi06G000100 vs. NCBI nr
Match: KAA0050973.1 (DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa] >TYK10319.1 DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa])

HSP 1 Score: 1304.3 bits (3374), Expect = 0.0e+00
Identity = 691/781 (88.48%), Postives = 704/781 (90.14%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSF DKSHLIALK  TCFS S+RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
           GF SSAIATPNSILSEEAFRSLDGFSKD LDDNLID EPNSSLAFS    ADDDELAISK
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFS----ADDDELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180

Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
           DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240

Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
           GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300

Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
           LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360

Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
           YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420

Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
           DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480

Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
           DVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+F PTAQKLIDEQGPGALAAAL
Sbjct: 481 DVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAAL 540

Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
           AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADE+GK
Sbjct: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGK 600

Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
           IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK            LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK------------LPPLQDDG 660

Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD----------------- 720
           PPSDNYGRFS RERNSRNSSRDRRG+RTSRGWGSSRDSDDD D                 
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGDMFSRNRSFRTNSSKGRN 720

Query: 721 -QAGHHPWI-------------------------DLEAPVLIAEGWGTGHQNALTSDKQD 739
            ++    W+                         +L APVL AEGW TGHQNALTSDKQD
Sbjct: 721 FRSSGDDWLIGGRRSSRSSSVDRRLEPVSFTHLGNLAAPVLTAEGWDTGHQNALTSDKQD 765

[Close]
BLAST of Lsi06G000100 vs. NCBI nr
Match: XP_038879136.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 1286.2 bits (3327), Expect = 0.0e+00
Identity = 673/704 (95.60%), Postives = 681/704 (96.73%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFA+KSHLIALKA TCFS S+RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFAEKSHLIALKAQTCFSGSSRRNLS 60

Query: 61  GFI-SSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAIS 120
           GF  SSAIATPNSILSEEAFRSLDGFSKDSLD NL+DSE NSSLAFS APPADDDELAIS
Sbjct: 61  GFTSSSAIATPNSILSEEAFRSLDGFSKDSLDGNLVDSESNSSLAFSTAPPADDDELAIS 120

Query: 121 KLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180
           KL+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT
Sbjct: 121 KLNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLT 180

Query: 181 EDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
           EDDE RSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALS
Sbjct: 181 EDDELRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALS 240

Query: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
           RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQ+
Sbjct: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQS 300

Query: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
           MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT
Sbjct: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360

Query: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420
           VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA
Sbjct: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420

Query: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480
           TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE
Sbjct: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480

Query: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAA 540
           RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFF PTA+KLIDEQGPGALAAA
Sbjct: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFTPTARKLIDEQGPGALAAA 540

Query: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600
           LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG
Sbjct: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600

Query: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDD 660
           KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK            LPPLQDD
Sbjct: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK------------LPPLQDD 660

Query: 661 GPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
           GPPSDNYGRFS RERNSRNSSRDRRG+RTSRGWGSSRDSDDD D
Sbjct: 661 GPPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGD 692

[Close]
BLAST of Lsi06G000100 vs. NCBI nr
Match: XP_008450498.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo])

HSP 1 Score: 1277.3 bits (3304), Expect = 0.0e+00
Identity = 667/703 (94.88%), Postives = 676/703 (96.16%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MASLLGVTAIHHAPNLD+YRRMGTTATASPTPSLSF DKSHLIALK  TCFS S+RRNLS
Sbjct: 1   MASLLGVTAIHHAPNLDLYRRMGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
           GF SSAIATPNSILSEEAFRSLDGFSKD LDDNLID EPNSSLAFS    ADDDELAISK
Sbjct: 61  GFTSSAIATPNSILSEEAFRSLDGFSKDPLDDNLIDPEPNSSLAFS----ADDDELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180

Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
           DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240

Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
           GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300

Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
           LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360

Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
           YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420

Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
           DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480

Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
           DVGCKFEFANPPAIE+VLESSAEQVVVTLRGVHPESIE+F PTAQKLIDEQGPGALAAAL
Sbjct: 481 DVGCKFEFANPPAIEQVLESSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGPGALAAAL 540

Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
           AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADE+GK
Sbjct: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEIGK 600

Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
           IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK            LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTK------------LPPLQDDG 660

Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
           PPSDNYGRFS RERNSRNSSRDRRG+RTSRGWGSSRDSDDD D
Sbjct: 661 PPSDNYGRFSGRERNSRNSSRDRRGFRTSRGWGSSRDSDDDGD 687

[Close]
BLAST of Lsi06G000100 vs. NCBI nr
Match: KAG6588579.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1261.1 bits (3262), Expect = 0.0e+00
Identity = 668/741 (90.15%), Postives = 692/741 (93.39%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGT--TATASPTPSLSFADKSHLIALKALTCFSAS-NRR 60
           MAS+LGVTAIHHAPNLDMYRRMGT  TAT S TPSLSFADKSH  + KALT  S+S +RR
Sbjct: 1   MASILGVTAIHHAPNLDMYRRMGTPATATVSSTPSLSFADKSHFNSFKALTSLSSSGSRR 60

Query: 61  NLSGFISSAIATPNSILSEEAFRSLDGFSKDSLDDN-LIDSEPNSSLAFSAAPPADDDEL 120
           N SGF SSAIATPNSILSEEAFRSLDGFSKDSLDD+ LIDSE NSSLAFS     DDDEL
Sbjct: 61  NFSGFSSSAIATPNSILSEEAFRSLDGFSKDSLDDDGLIDSEANSSLAFS-----DDDEL 120

Query: 121 AISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILK 180
           AISKL LPQRL+DAL+KRGIT LF IQRAVLVPALEGRDLIARAKTGTGKTLAFGIPI+K
Sbjct: 121 AISKLGLPQRLSDALEKRGITQLFAIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPIIK 180

Query: 181 KLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQN 240
           K+TEDDE +S RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQ+
Sbjct: 181 KITEDDELKSPRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQS 240

Query: 241 ALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQ 300
           ALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQ
Sbjct: 241 ALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQ 300

Query: 301 RQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRD 360
           RQNMLFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKL+AILTTATSKQTILRD
Sbjct: 301 RQNMLFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLYAILTTATSKQTILRD 360

Query: 361 LVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTV 420
           LVTVYAKGGKTIVFT+TKRDADEVSLALAN+ITSEALHGDISQHQRERTLNGFRQGKFTV
Sbjct: 361 LVTVYAKGGKTIVFTRTKRDADEVSLALANTITSEALHGDISQHQRERTLNGFRQGKFTV 420

Query: 421 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVR 480
           LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVR
Sbjct: 421 LVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVR 480

Query: 481 SLERDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGAL 540
           SLERDVGCKFEFANPP IE+VLESSAEQVVVTLRGVHPESIEFF PTAQKLIDEQG GAL
Sbjct: 481 SLERDVGCKFEFANPPGIEKVLESSAEQVVVTLRGVHPESIEFFTPTAQKLIDEQGAGAL 540

Query: 541 AAALAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAAD 600
           AAALAQLSGFS PPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAAD
Sbjct: 541 AAALAQLSGFSRPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAAD 600

Query: 601 EVGKIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPL 660
           EVGKIHLIADERINGAVFDLPEEIAKELLNK+LPEGNT+LK+TK            LPPL
Sbjct: 601 EVGKIHLIADERINGAVFDLPEEIAKELLNKDLPEGNTLLKITK------------LPPL 660

Query: 661 QDDGPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGW-GSSRDSDDD-DDQAGHHPWIDLE 720
           QDDGPPSD+YGRFS RER+SRNSSRDRRG RTSRGW GSSRDSDDD DDQA HHPWIDLE
Sbjct: 661 QDDGPPSDSYGRFSGRERSSRNSSRDRRGSRTSRGWGGSSRDSDDDADDQADHHPWIDLE 720

Query: 721 APVLIAEGWGTGHQNALTSDK 736
            PVL AEGWGTGHQNA T ++
Sbjct: 721 GPVLTAEGWGTGHQNAPTIEE 724

[Close]
BLAST of Lsi06G000100 vs. NCBI nr
Match: XP_004135577.1 (DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus] >KGN66001.1 hypothetical protein Csa_007094 [Cucumis sativus])

HSP 1 Score: 1252.7 bits (3240), Expect = 0.0e+00
Identity = 653/703 (92.89%), Postives = 671/703 (95.45%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MASLLGVTAI HAPNLD+YRR GTTATASPTPSLSF DKSHLIALK  TCFS S+RRNLS
Sbjct: 1   MASLLGVTAILHAPNLDLYRRTGTTATASPTPSLSFVDKSHLIALKVQTCFSGSSRRNLS 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
           GF SSAIATPNSILSEEAFRS DGFS+DSLDDNLID EPNSSLAF+    ADDDELAISK
Sbjct: 61  GFTSSAIATPNSILSEEAFRSFDGFSEDSLDDNLIDPEPNSSLAFA----ADDDELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L+LPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE
Sbjct: 121 LNLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180

Query: 181 DDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSR 240
           DDESRS RRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSY+TQQNALSR
Sbjct: 181 DDESRSLRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYITQQNALSR 240

Query: 241 GVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300
           GVDVVVGTPGR+IDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM
Sbjct: 241 GVDVVVGTPGRLIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNM 300

Query: 301 LFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360
           LFSATMPTWVKKLARKYL+NPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV
Sbjct: 301 LFSATMPTWVKKLARKYLDNPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTV 360

Query: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420
           YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT
Sbjct: 361 YAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVAT 420

Query: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480
           DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER
Sbjct: 421 DVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLER 480

Query: 481 DVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAAL 540
           DVGCKFEFANPP +EEVL+SSAEQVVVTLRGVHPESIE+F PTAQKLIDEQG GALAAAL
Sbjct: 481 DVGCKFEFANPPGMEEVLKSSAEQVVVTLRGVHPESIEYFTPTAQKLIDEQGLGALAAAL 540

Query: 541 AQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGK 600
           AQLSGF+HPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSD+YSPAADE+GK
Sbjct: 541 AQLSGFTHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDVYSPAADEIGK 600

Query: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDG 660
           IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILK+TK            LPPLQDDG
Sbjct: 601 IHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKITK------------LPPLQDDG 660

Query: 661 PPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDDDDD 704
           PPSDNYGRFS RER+SRNSSRDRRG +TSRGWGSSRDSDD+ D
Sbjct: 661 PPSDNYGRFSGRERSSRNSSRDRRGLKTSRGWGSSRDSDDNGD 687

[Close]
BLAST of Lsi06G000100 vs. TAIR 10
Match: AT5G26742.1 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 911.0 bits (2353), Expect = 6.2e-265
Identity = 503/708 (71.05%), Postives = 573/708 (80.93%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MAS +GV +++  P+L++ +    +   S   SLS  DK     L  +      +  +L 
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLSL-DKPFFTPLSLVRRTRRIHSSSL- 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
             + SA+ATPNS+LSEEAF+SL     D  D   +D + N+  A       D +ELAISK
Sbjct: 61  -LVPSAVATPNSVLSEEAFKSLGLSDHDEYD---LDGDNNNVEA------DDGEELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE
Sbjct: 121 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 180

Query: 181 DDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
           +    ++ RRS RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+
Sbjct: 181 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALT 240

Query: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
           RGVDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+
Sbjct: 241 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 300

Query: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
           MLFSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T
Sbjct: 301 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 360

Query: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420
           VYAKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVA
Sbjct: 361 VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 420

Query: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480
           TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLE
Sbjct: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLE 480

Query: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAA 540
           RDVGC FEF +PP + ++LESSA+QVV TL GVHP+SI+FF  TAQKL +E+G  ALAAA
Sbjct: 481 RDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAA 540

Query: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600
           LA LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADEVG
Sbjct: 541 LAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVG 600

Query: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDD 660
           KI LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TK            LPPLQDD
Sbjct: 601 KIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITK------------LPPLQDD 660

Query: 661 GPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDD---DDDQ 705
           GP SDNYGRFSSR+R  R      RG R  RG GSSR  D    DDD+
Sbjct: 661 GPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDR 680

[Close]
BLAST of Lsi06G000100 vs. TAIR 10
Match: AT5G26742.2 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 911.0 bits (2353), Expect = 6.2e-265
Identity = 503/708 (71.05%), Postives = 573/708 (80.93%), Query Frame = 0 

Query: 1   MASLLGVTAIHHAPNLDMYRRMGTTATASPTPSLSFADKSHLIALKALTCFSASNRRNLS 60
           MAS +GV +++  P+L++ +    +   S   SLS  DK     L  +      +  +L 
Sbjct: 1   MASTVGVPSLYQVPHLEISK--PNSKKRSNCLSLSL-DKPFFTPLSLVRRTRRIHSSSL- 60

Query: 61  GFISSAIATPNSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISK 120
             + SA+ATPNS+LSEEAF+SL     D  D   +D + N+  A       D +ELAISK
Sbjct: 61  -LVPSAVATPNSVLSEEAFKSLGLSDHDEYD---LDGDNNNVEA------DDGEELAISK 120

Query: 121 LHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTE 180
           L LPQRL ++L+KRGITHLFPIQRAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE
Sbjct: 121 LSLPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTE 180

Query: 181 DDESRSSRRRS-RLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALS 240
           +    ++ RRS RLP+ LVL PTRELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+
Sbjct: 181 EAGDYTAFRRSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALT 240

Query: 241 RGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQN 300
           RGVDVVVGTPGRIIDLI G SL LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+
Sbjct: 241 RGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQS 300

Query: 301 MLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVT 360
           MLFSATMPTWVKKLARKYL+NPL IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+T
Sbjct: 301 MLFSATMPTWVKKLARKYLDNPLNIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLIT 360

Query: 361 VYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVA 420
           VYAKGGKTIVFTQTKRDADEVSLAL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVA
Sbjct: 361 VYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVA 420

Query: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLE 480
           TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLE
Sbjct: 421 TDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLE 480

Query: 481 RDVGCKFEFANPPAIEEVLESSAEQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAA 540
           RDVGC FEF +PP + ++LESSA+QVV TL GVHP+SI+FF  TAQKL +E+G  ALAAA
Sbjct: 481 RDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAA 540

Query: 541 LAQLSGFSHPPSSRSLINHEQGWVTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVG 600
           LA LSGFS PPSSRSL++HE+GWVTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADEVG
Sbjct: 541 LAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVG 600

Query: 601 KIHLIADERINGAVFDLPEEIAKELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDD 660
           KI LIAD+RI GAVFDLPEEIAKELL K++PEGN++  +TK            LPPLQDD
Sbjct: 601 KIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSLSMITK------------LPPLQDD 660

Query: 661 GPPSDNYGRFSSRERNSRNSSRDRRGYRTSRGWGSSRDSDD---DDDQ 705
           GP SDNYGRFSSR+R  R      RG R  RG GSSR  D    DDD+
Sbjct: 661 GPSSDNYGRFSSRDRMPRGGG-GSRGSRGGRG-GSSRGRDSWGGDDDR 680

[Close]
BLAST of Lsi06G000100 vs. TAIR 10
Match: AT5G26742.3 (DEAD box RNA helicase (RH3) )

HSP 1 Score: 836.6 bits (2160), Expect = 1.5e-242
Identity = 443/565 (78.41%), Postives = 490/565 (86.73%), Query Frame = 0 

Query: 144 RAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRRS-RLPRVLVLTPT 203
           RAVLVPAL+GRD+IARAKTGTGKTLAFGIPI+K+LTE+    ++ RRS RLP+ LVL PT
Sbjct: 37  RAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPT 96

Query: 204 RELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPGRIIDLINGNSLN 263
           RELAKQVEKEIKESAPYL+TVCVYGGVSY  QQ+AL+RGVDVVVGTPGRIIDLI G SL 
Sbjct: 97  RELAKQVEKEIKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLK 156

Query: 264 LGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWVKKLARKYLENPL 323
           LGEVEYLVLDEADQMLAVGFEE VE ILE LP++RQ+MLFSATMPTWVKKLARKYL+NPL
Sbjct: 157 LGEVEYLVLDEADQMLAVGFEEAVESILENLPTKRQSMLFSATMPTWVKKLARKYLDNPL 216

Query: 324 TIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVFTQTKRDADEVSL 383
            IDLVGDQDEKLAEGIKL+AI TT+TSK+TIL DL+TVYAKGGKTIVFTQTKRDADEVSL
Sbjct: 217 NIDLVGDQDEKLAEGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSL 276

Query: 384 ALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 443
           AL+NSI +EALHGDISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN
Sbjct: 277 ALSNSIATEALHGDISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPN 336

Query: 444 DPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFANPPAIEEVLESSA 503
           DPETFVHRSGRTGRAGKEG+AILM T+SQ+RTVRSLERDVGC FEF +PP + ++LESSA
Sbjct: 337 DPETFVHRSGRTGRAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSA 396

Query: 504 EQVVVTLRGVHPESIEFFIPTAQKLIDEQGPGALAAALAQLSGFSHPPSSRSLINHEQGW 563
           +QVV TL GVHP+SI+FF  TAQKL +E+G  ALAAALA LSGFS PPSSRSL++HE+GW
Sbjct: 397 DQVVATLNGVHPDSIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGW 456

Query: 564 VTLQLTRDPSYSRGFLSARSVTGFLSDIYSPAADEVGKIHLIADERINGAVFDLPEEIAK 623
           VTLQL RDP+ +RGFLSARSVTGFLSD+Y  AADEVGKI LIAD+RI GAVFDLPEEIAK
Sbjct: 457 VTLQLIRDPTNARGFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAK 516

Query: 624 ELLNKELPEGNTILKVTKNVGTCSILRLLQLPPLQDDGPPSDNYGRFSSRERNSRNSSRD 683
           ELL K++PEGN++  +TK            LPPLQDDGP SDNYGRFSSR+R  R     
Sbjct: 517 ELLEKDVPEGNSLSMITK------------LPPLQDDGPSSDNYGRFSSRDRMPRGGG-G 576

Query: 684 RRGYRTSRGWGSSRDSDD---DDDQ 705
            RG R  RG GSSR  D    DDD+
Sbjct: 577 SRGSRGGRG-GSSRGRDSWGGDDDR 587

[Close]
BLAST of Lsi06G000100 vs. TAIR 10
Match: AT3G22330.1 (putative mitochondrial RNA helicase 2 )

HSP 1 Score: 469.5 bits (1207), Expect = 4.8e-132
Identity = 238/392 (60.71%), Postives = 298/392 (76.02%), Query Frame = 0 

Query: 114 DELAISKLHLPQRLTDALQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIP 173
           D LAIS+L +   +  AL  +GI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIP
Sbjct: 102 DGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIP 161

Query: 174 ILKKLTEDDESRSSRRRSRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVT 233
           I+ K+    +  +   R R P  LVL PTRELA+QVEKE +ESAP L+T+C+YGG     
Sbjct: 162 IIDKII---KYNAKHGRGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQ 221

Query: 234 QQNALSRGVDVVVGTPGRIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKL 293
           Q   L  GVDV VGTPGR+IDL+   +LNL EV+++VLDEADQML VGF EDVE+ILEKL
Sbjct: 222 QMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILEKL 281

Query: 294 PSQRQNMLFSATMPTWVKKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTI 353
           P +RQ+M+FSATMP+W++ L +KYL NPLT+DLVGD D+KLA+GI  ++I+  +  + +I
Sbjct: 282 PEKRQSMMFSATMPSWIRSLTKKYLNNPLTVDLVGDSDQKLADGITTYSIIADSYGRASI 341

Query: 354 LRDLVTVYAKGGKTIVFTQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGK 413
           +  LVT +AKGGK IVFTQTKRDAD +S ALA S   EALHGDISQ QRERTL GFR G 
Sbjct: 342 IGPLVTEHAKGGKCIVFTQTKRDADRLSYALARSFKCEALHGDISQSQRERTLAGFRDGH 401

Query: 414 FTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRR 473
           F +LVATDVA+RGLD+PNVDL+IHYELPN+ ETFVHR+GRTGRAGK+G+AIL+++  Q R
Sbjct: 402 FNILVATDVAARGLDVPNVDLIIHYELPNNTETFVHRTGRTGRAGKKGSAILIYSQDQSR 461

Query: 474 TVRSLERDVGCKFEFANPPAIEEVLESSAEQV 506
            V+ +ER+VG +F      A+E    S  E +
Sbjct: 462 AVKIIEREVGSRFTELPSIAVERGSASMFEGI 490

[Close]
BLAST of Lsi06G000100 vs. TAIR 10
Match: AT3G22310.1 (putative mitochondrial RNA helicase 1 )

HSP 1 Score: 459.9 bits (1182), Expect = 3.8e-129
Identity = 243/435 (55.86%), Postives = 311/435 (71.49%), Query Frame = 0 

Query: 71  NSILSEEAFRSLDGFSKDSLDDNLIDSEPNSSLAFSAAPPADDDELAISKLHLPQRLTDA 130
           +SI+S   F + +       D  + DSE       S       D LAI+ L +   +  A
Sbjct: 78  SSIVSSAGFAAQEYAPSYENDGGIGDSE-------SVGSSGGGDGLAIADLGISPEIVKA 137

Query: 131 LQKRGITHLFPIQRAVLVPALEGRDLIARAKTGTGKTLAFGIPILKKLTEDDESRSSRRR 190
           L+ RGI  LFPIQ+AVL PA+EGRD+I RA+TGTGKTLAFGIPI+ K+    +  +   R
Sbjct: 138 LKGRGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPIIDKII---KFNAKHGR 197

Query: 191 SRLPRVLVLTPTRELAKQVEKEIKESAPYLNTVCVYGGVSYVTQQNALSRGVDVVVGTPG 250
            + P+ LVL PTRELA+QVEKE +ESAP L+T+C+YGG     Q   L+ G+DV VGTPG
Sbjct: 198 GKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPG 257

Query: 251 RIIDLINGNSLNLGEVEYLVLDEADQMLAVGFEEDVEVILEKLPSQRQNMLFSATMPTWV 310
           RIIDL+   +LNL EV+++VLDEADQML VGF EDVE+IL+KLP++RQ+M+FSATMP+W+
Sbjct: 258 RIIDLMKRGALNLSEVQFVVLDEADQMLQVGFAEDVEIILQKLPAKRQSMMFSATMPSWI 317

Query: 311 KKLARKYLENPLTIDLVGDQDEKLAEGIKLHAILTTATSKQTILRDLVTVYAKGGKTIVF 370
           + L +KYL NPLTIDLVGD D+KLA+GI +++I   +  + +I+  LV  + KGGK IVF
Sbjct: 318 RSLTKKYLNNPLTIDLVGDSDQKLADGITMYSIAADSYGRASIIGPLVKEHGKGGKCIVF 377

Query: 371 TQTKRDADEVSLALANSITSEALHGDISQHQRERTLNGFRQGKFTVLVATDVASRGLDIP 430
           TQTKRDAD ++  LA S   EALHGDISQ QRERTL GFR G F++LVATDVA+RGLD+P
Sbjct: 378 TQTKRDADRLAFGLAKSYKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAARGLDVP 437

Query: 431 NVDLVIHYELPNDPETFVHRSGRTGRAGKEGTAILMFTNSQRRTVRSLERDVGCKFEFAN 490
           NVDLVIHYELPN+ ETFVHR+GRTGRAGK+G+AIL+    Q R V+ +E++VG +F    
Sbjct: 438 NVDLVIHYELPNNTETFVHRTGRTGRAGKKGSAILIHGQDQTRAVKMIEKEVGSRFNELP 497

Query: 491 PPAIEEVLESSAEQV 506
             A+E    S  E V
Sbjct: 498 SIAVERGSASMFEGV 502

The following BLAST results are available for this feature:
BLAST of Lsi06G000100 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8L7S88.8e-26471.05DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Arabidopsis thaliana OX=... [more]
Q0DM514.5e-26070.80DEAD-box ATP-dependent RNA helicase 3, chloroplastic OS=Oryza sativa subsp. japo... [more]
A0A1D6GDY87.5e-25569.12DEAD-box ATP-dependent RNA helicase 3A, chloroplastic OS=Zea mays OX=4577 GN=RH3... [more]
A0A1D6LAB72.2e-25473.08DEAD-box ATP-dependent RNA helicase 3B, chloroplastic OS=Zea mays OX=4577 GN=RH3... [more]
Q9LUW56.8e-13160.71DEAD-box ATP-dependent RNA helicase 53, mitochondrial OS=Arabidopsis thaliana OX... [more]
BLAST of Lsi06G000100 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CJA20.0e+0088.48RNA helicase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004730 P... [more]
A0A1S3BQ060.0e+0094.88RNA helicase OS=Cucumis melo OX=3656 GN=LOC103492086 PE=3 SV=1[more]
A0A0A0M1E90.0e+0092.89RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_1G560830 PE=3 SV=1[more]
A0A6J1DXX80.0e+0089.51RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1[more]
A0A6J1DUC80.0e+0089.51RNA helicase OS=Momordica charantia OX=3673 GN=LOC111024523 PE=3 SV=1[more]
BLAST of Lsi06G000100 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050973.10.0e+0088.48DEAD-box ATP-dependent RNA helicase 3 [Cucumis melo var. makuwa] >TYK10319.1 DEA... [more]
XP_038879136.10.0e+0095.60DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Benincasa hispida][more]
XP_008450498.10.0e+0094.88PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis melo][more]
KAG6588579.10.0e+0090.15DEAD-box ATP-dependent RNA helicase 3, chloroplastic, partial [Cucurbita argyros... [more]
XP_004135577.10.0e+0092.89DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Cucumis sativus] >KGN66001... [more]
BLAST of Lsi06G000100 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G26742.16.2e-26571.05DEAD box RNA helicase (RH3) [more]
AT5G26742.26.2e-26571.05DEAD box RNA helicase (RH3) [more]
AT5G26742.31.5e-24278.41DEAD box RNA helicase (RH3) [more]
AT3G22330.14.8e-13260.71putative mitochondrial RNA helicase 2 [more]
AT3G22310.13.8e-12955.86putative mitochondrial RNA helicase 1 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 135..341
e-value: 1.0E-59
score: 214.4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 147..324
score: 31.99313
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 378..458
e-value: 6.5E-32
score: 122.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 352..458
e-value: 1.8E-31
score: 108.8
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 353..513
score: 23.455368
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 140..313
e-value: 1.6E-47
score: 161.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 338..528
e-value: 1.1E-51
score: 177.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 117..328
e-value: 7.2E-76
score: 256.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 194..479
IPR012562GUCTPFAMPF08152GUCTcoord: 545..639
e-value: 3.7E-15
score: 56.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 654..711
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 670..709
NoneNo IPR availablePANTHERPTHR47959:SF12SUBFAMILY NOT NAMEDcoord: 26..706
NoneNo IPR availablePANTHERPTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDcoord: 26..706
NoneNo IPR availableCDDcd00268DEADccoord: 127..325
e-value: 5.99395E-95
score: 291.268
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 338..467
e-value: 6.22043E-54
score: 180.011
NoneNo IPR availableCDDcd12938GUCT_Heracoord: 552..632
e-value: 3.59184E-21
score: 85.8127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G000100.1Lsi06G000100.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000373 Group II intron splicing
biological_process GO:0006364 rRNA processing
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0005524 ATP binding
molecular_function GO:0016887 ATP hydrolysis activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0003724 RNA helicase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0003676 nucleic acid binding