Lsi05G022000 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G022000
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	metalloendoproteinase 4-MMP
Location	chr05: 28576215 .. 28577051 (+)
RNA-Seq Expression	Lsi05G022000
Synteny	Lsi05G022000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTGCCCCTTACATTGGTCCTCTTCTTCTTCCTCTGTACGCCGCCCTGCCTTCCATCCCCAACAACACTACGCCAAAAACCCACCGCCGCCGTTACTTTCCGGTCAAATTCCACTTCACTGCGGTGGCGCGTGTCCAACGCGTTACATAGACCCCATGCAACGGCGCGTTATGTATTTTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATAAGCAACTTGAGTATAAAAGACGTGAGAACCGTATTTCGTAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGGTACGCTGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGGCAGGCCTTCGACGGCGTGTTGGGGGTTTTGGCGCATTCTTTTTCGCCGGAAATTGGGCGGCTACACCTGGATGCGGCGGAGACGTGGGCAGTGGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCACGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCGGTGAGAGAATCGGTGATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTGGAAATGGATGACGTGGAAGGCGTACAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATTGGAGTCTGATACTTCTGCCAGTCAGCCACCTGTTTCCACGTGTACAACAACATGCCCTTTTTCCCTCGTCTTCTTCCTAATCTCCACTTACCATTTTATTCTTTTTCCATAA

mRNA sequence

ATGTTTCTGCCCCTTACATTGGTCCTCTTCTTCTTCCTCTGTACGCCGCCCTGCCTTCCATCCCCAACAACACTACGCCAAAAACCCACCGCCGCCGTTACTTTCCGGTCAAATTCCACTTCACTGCGGTGGCGCGTGTCCAACGCGTTACATAGACCCCATGCAACGGCGCGTTATGTATTTTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATAAGCAACTTGAGTATAAAAGACGTGAGAACCGTATTTCGTAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGGTACGCTGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGGCAGGCCTTCGACGGCGTGTTGGGGGTTTTGGCGCATTCTTTTTCGCCGGAAATTGGGCGGCTACACCTGGATGCGGCGGAGACGTGGGCAGTGGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCACGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCGGTGAGAGAATCGGTGATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTGGAAATGGATGACGTGGAAGGCGTACAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATTGGAGTCTGATACTTCTGCCAGTCAGCCACCTGTTTCCACGTGTACAACAACATGCCCTTTTTCCCTCGTCTTCTTCCTAATCTCCACTTACCATTTTATTCTTTTTCCATAA

Coding sequence (CDS)

ATGTTTCTGCCCCTTACATTGGTCCTCTTCTTCTTCCTCTGTACGCCGCCCTGCCTTCCATCCCCAACAACACTACGCCAAAAACCCACCGCCGCCGTTACTTTCCGGTCAAATTCCACTTCACTGCGGTGGCGCGTGTCCAACGCGTTACATAGACCCCATGCAACGGCGCGTTATGTATTTTTTCCCGGGAAGCCACGGTGGACGCGGCGAATGCCGATGGTGCTGACGTACGCATTTTTCAAGGAGAATTGGATAAGCAACTTGAGTATAAAAGACGTGAGAACCGTATTTCGTAAGGCGTTTTCGAAATGGGCCCACGTGATTCCGGTGAGTTTCGAGGAGACCGACGACTATGGGTACGCTGATATTAAAATCGGGTTTTACAGAGGCGATCATAGCGACGGGCAGGCCTTCGACGGCGTGTTGGGGGTTTTGGCGCATTCTTTTTCGCCGGAAATTGGGCGGCTACACCTGGATGCGGCGGAGACGTGGGCAGTGGATTTCGAGAAGGAGAAATCGGCGGTGGCGGTTGATTTGGAATCGGTGGCGACGCACGAGATTGGTCATTTGTTGGGGCTGGGTCACAGCTCGGTGAGAGAATCGGTGATGTATCCAAGCTTGAAGCCGAGGGAAAAGAAGGCAAATTTGGAAATGGATGACGTGGAAGGCGTACAAGCTCTGTACGGATCGAATCCGAATTTCAAGTTTGAGTCTTTGGAATTGGAGTCTGATACTTCTGCCAGTCAGCCACCTGTTTCCACGTGTACAACAACATGCCCTTTTTCCCTCGTCTTCTTCCTAATCTCCACTTACCATTTTATTCTTTTTCCATAA

Protein sequence

MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESLELESDTSASQPPVSTCTTTCPFSLVFFLISTYHFILFP

Homology

[Close]

BLAST of Lsi05G022000 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 2.0e-75
Identity = 136/196 (69.39%), Postives = 161/196 (82.14%), Query Frame = 0


Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           H   +YV+FPG+PRWTR +P+ LTYAF +EN    L+  D+R VFR+AF KWA VIPVSF
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEK 173
            ET+DY  ADIKIGF+ GDH DG+ FDGVLGVLAH+FSPE GRLHLD AETWAVDF++EK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 174 SAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNP 233
           S+VAVDLESVA HEIGH+LGLGHSSV+++ MYP+LKPR KK NL MDDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 234 NFKFESLELESDTSAS 250
           NF   SL L S+TS +
Sbjct: 300 NFTLNSL-LASETSTN 314

[Close]

BLAST of Lsi05G022000 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 1.3e-63
Identity = 122/194 (62.89%), Postives = 144/194 (74.23%), Query Frame = 0


Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           H TA Y +F GKP+W R     LTYA  K + +  L+ +DV+TVFR+AFS+W+ VIPVSF
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-KE 173
           EE DD+  AD+KIGFY GDH DG  FDGVLG LAH+F+PE GRLHLDAAETW VD + K 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 174 KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSN 233
            S VAVDLESVATHEIGHLLGLGHSS   +VMYPSL+PR KK +L +DDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 234 PNFKFESLELESDT 247
           P  + +SL    D+
Sbjct: 325 PKLRLDSLTQSEDS 335

[Close]

BLAST of Lsi05G022000 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 4.9e-50
Identity = 98/185 (52.97%), Postives = 128/185 (69.19%), Query Frame = 0


Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           HA  RY  FPG+PRW R     LTYAF  +N ++    ++V++VF +AF +W+ V  ++F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKE- 173
             ++ +  +DI IGFY GDH DG+ FDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 174 --KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYG 233
                 AVDLESVA HEIGHLLGLGHSSV ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 234 SNPNF 236
           +NPNF
Sbjct: 330 ANPNF 329

[Close]

BLAST of Lsi05G022000 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.0e-47
Identity = 96/188 (51.06%), Postives = 123/188 (65.43%), Query Frame = 0


Query: 52  RPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPV 111
           R HA   Y FFPG+PRW R     LTYAF   N ++    ++V++VF +AF++W  V P+
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPL 211

Query: 112 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 171
           +F   + +  +DI IGFY G+H DG+ FDG +  LAH+FSP  G  HLD  E W V  E 
Sbjct: 212 TFTRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEG 271

Query: 172 EKSAV----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQA 231
               +    AVDLESVA HEIGHLLGLGHSSV  S+MYP+++   +K +L  DDVEGVQ 
Sbjct: 272 GDGFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQY 331

Query: 232 LYGSNPNF 236
           LYG+NPNF
Sbjct: 332 LYGANPNF 334

[Close]

BLAST of Lsi05G022000 vs. ExPASy Swiss-Prot
Match: Q9ZUJ5 (Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 4.8e-45
Identity = 89/184 (48.37%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 56  TARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEE 115
           T +Y FFPGKPRW +R    LTYAF  +N +++    +V+ VF +AF++WA V P++F  
Sbjct: 140 TEKYSFFPGKPRWPKR-KRDLTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTR 199

Query: 116 TDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSA 175
           ++    ADI IGF+ G+H DG+ FDG +G LAH+ SP  G LHLD  E W +   +    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 176 V-----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYG 235
           +      VDLESVA HEIGHLLGLGHSSV +++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

[Close]

BLAST of Lsi05G022000 vs. ExPASy TrEMBL
Match: A0A5D3DB58 (Metalloendoproteinase 4-MMP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00450 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 249/282 (88.30%), Postives = 257/282 (91.13%), Query Frame = 0


Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAV-TFRSNSTSL--RWRVSNALHRPHATA 60
           MFLPL L+LFFFLCTP CLP PTTL Q  TAAV  FRSNS+SL  R R++  LH PHAT 
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLHNPHATE 60

Query: 61  RYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETD 120
           RYVFFPGKPRW RRMPMVLTYAFFKENW+SNLS+KDVR VFRKAFSKWAHVIPVSFEETD
Sbjct: 61  RYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETD 120

Query: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180
           DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA
Sbjct: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180

Query: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKF 240
           VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKF
Sbjct: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKF 240

Query: 241 ESLELESDTSASQPPVSTCTTTCPFSL-VFFLISTYHFILFP 279
           ESLELESDTS +QPPVSTCT  CPFSL  FFLI  YHF LFP
Sbjct: 241 ESLELESDTSDTQPPVSTCTMACPFSLPFFFLIFPYHFFLFP 282

[Close]

BLAST of Lsi05G022000 vs. ExPASy TrEMBL
Match: A0A1S3AUH8 (metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=4 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 1.1e-134
Identity = 249/282 (88.30%), Postives = 257/282 (91.13%), Query Frame = 0


Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAV-TFRSNSTSL--RWRVSNALHRPHATA 60
           MFLPL L+LFFFLCTP CLP PTTL Q  TAAV  FRSNS+SL  R R++  LH PHAT 
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLHNPHATE 60

Query: 61  RYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETD 120
           RYVFFPGKPRW RRMPMVLTYAFFKENW+SNLS+KDVR VFRKAFSKWAHVIPVSFEETD
Sbjct: 61  RYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETD 120

Query: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180
           DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA
Sbjct: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180

Query: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKF 240
           VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKF
Sbjct: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKF 240

Query: 241 ESLELESDTSASQPPVSTCTTTCPFSL-VFFLISTYHFILFP 279
           ESLELESDTS +QPPVSTCT  CPFSL  FFLI  YHF LFP
Sbjct: 241 ESLELESDTSDTQPPVSTCTMACPFSLPFFFLIFPYHFFLFP 282

[Close]

BLAST of Lsi05G022000 vs. ExPASy TrEMBL
Match: A0A0A0L2Y8 (ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G117950 PE=4 SV=1)

HSP 1 Score: 479.9 bits (1234), Expect = 7.0e-132
Identity = 241/275 (87.64%), Postives = 251/275 (91.27%), Query Frame = 0


Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYV 60
           MFLPL L+LFFFLCTP CLP PTTL Q PT+AV FRS+S+S        LH PHAT RYV
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNPTSAVIFRSDSSS--------LHNPHATERYV 60

Query: 61  FFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYG 120
           FFPGKPRWTRRMPMVLTYAFFK+NW+SNLS++DVR VFRKAFSKWAHVIPVSFEETDDYG
Sbjct: 61  FFPGKPRWTRRMPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYG 120

Query: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180
           YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL
Sbjct: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180

Query: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESL 240
           ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESL
Sbjct: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240

Query: 241 ELESDTSASQPPVSTCTTTCPFSL-VFFLISTYHF 275
           ELESDTSASQPPVSTCT  CPFSL  FFL   +HF
Sbjct: 241 ELESDTSASQPPVSTCTLACPFSLPFFFLFFPHHF 267

[Close]

BLAST of Lsi05G022000 vs. ExPASy TrEMBL
Match: A0A6J1IFQ0 (metalloendoproteinase 4-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111472903 PE=4 SV=1)

HSP 1 Score: 425.6 bits (1093), Expect = 1.6e-115
Identity = 219/284 (77.11%), Postives = 237/284 (83.45%), Query Frame = 0


Query: 1   MFLP------LTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPH 60
           MFLP        L+  FFLC PP +PS         +AVTFRSNST+ RWRV++ LH PH
Sbjct: 1   MFLPSIPPPRYLLLALFFLCLPPIIPS---------SAVTFRSNSTARRWRVADTLHGPH 60

Query: 61  ATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFE 120
            TARY++FPGKPRWTRRMPMVLTYAF KENWISNLS+KDV+ VFR AFSKWAHVIPV FE
Sbjct: 61  VTARYLYFPGKPRWTRRMPMVLTYAFLKENWISNLSLKDVKFVFRTAFSKWAHVIPVRFE 120

Query: 121 ETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKS 180
           ET+DYG+ADIKIGFYRGDH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+EKS
Sbjct: 121 ETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKS 180

Query: 181 AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPN 240
           AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPN
Sbjct: 181 AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPN 240

Query: 241 FKFESLELESDTSASQPPVSTCTTTCPFSLVFFLISTYHFILFP 279
           F+FESLELESDTSA      T T T  F + FF   T +FI+FP
Sbjct: 241 FRFESLELESDTSA------TWTMTWNFPISFFFFLTSNFIVFP 269

[Close]

BLAST of Lsi05G022000 vs. ExPASy TrEMBL
Match: A0A6J1FZ72 (metalloendoproteinase 4-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111449256 PE=4 SV=1)

HSP 1 Score: 397.1 bits (1019), Expect = 5.9e-107
Identity = 198/241 (82.16%), Postives = 211/241 (87.55%), Query Frame = 0


Query: 1   MFLPL------TLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPH 60
           MFLPL       L+  FFLC P  +PS         +AVTFR NST+ RWRVS+ LH PH
Sbjct: 1   MFLPLIPRSRYLLLALFFLCLPSIIPS---------SAVTFRPNSTARRWRVSDTLHGPH 60

Query: 61  ATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFE 120
           ATARYV+FPGKPRWTRRMPMVLTYAFFKENW+SNLS+KDV+ VFR AFSKWAHVIPV FE
Sbjct: 61  ATARYVYFPGKPRWTRRMPMVLTYAFFKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFE 120

Query: 121 ETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKS 180
           ET+DYG+ADIKIGFYRGDH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE+EKS
Sbjct: 121 ETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEEEKS 180

Query: 181 AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPN 236
           AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPN
Sbjct: 181 AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPN 232

[Close]

BLAST of Lsi05G022000 vs. NCBI nr
Match: XP_038903989.1 (metalloendoproteinase 4-MMP-like [Benincasa hispida])

HSP 1 Score: 513.1 bits (1320), Expect = 1.5e-141
Identity = 254/279 (91.04%), Postives = 263/279 (94.27%), Query Frame = 0


Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYV 60
           MFLPL L+LFFFLCTPPCLPSPTTL Q PTAAV FRSNSTS+RWRVS+ LH PHATARYV
Sbjct: 1   MFLPLLLLLFFFLCTPPCLPSPTTLPQNPTAAVIFRSNSTSMRWRVSDTLHTPHATARYV 60

Query: 61  FFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYG 120
           FFPGKPRWTRRMPMVLTYAFF+ENWISNLS+KDVR VFRKAFSKWAHVIPV FEETDDYG
Sbjct: 61  FFPGKPRWTRRMPMVLTYAFFEENWISNLSLKDVRAVFRKAFSKWAHVIPVRFEETDDYG 120

Query: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180
           YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETW VDFEKEKSAVAVDL
Sbjct: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWTVDFEKEKSAVAVDL 180

Query: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESL 240
           ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESL
Sbjct: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240

Query: 241 ELESDTSASQPPVSTCTTTCPFSLVFFLISTYHF-ILFP 279
            LESDTSASQPPVSTCT T PFSL FF+I T HF ++FP
Sbjct: 241 ALESDTSASQPPVSTCTVTWPFSLTFFIIFTSHFYLVFP 279

[Close]

BLAST of Lsi05G022000 vs. NCBI nr
Match: XP_008437790.1 (PREDICTED: metalloendoproteinase 4-MMP [Cucumis melo] >KAA0048832.1 metalloendoproteinase 4-MMP [Cucumis melo var. makuwa] >TYK20784.1 metalloendoproteinase 4-MMP [Cucumis melo var. makuwa])

HSP 1 Score: 489.2 bits (1258), Expect = 2.4e-134
Identity = 249/282 (88.30%), Postives = 257/282 (91.13%), Query Frame = 0


Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAV-TFRSNSTSL--RWRVSNALHRPHATA 60
           MFLPL L+LFFFLCTP CLP PTTL Q  TAAV  FRSNS+SL  R R++  LH PHAT 
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNSTAAVIIFRSNSSSLQGRRRLTETLHNPHATE 60

Query: 61  RYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETD 120
           RYVFFPGKPRW RRMPMVLTYAFFKENW+SNLS+KDVR VFRKAFSKWAHVIPVSFEETD
Sbjct: 61  RYVFFPGKPRWARRMPMVLTYAFFKENWMSNLSLKDVRAVFRKAFSKWAHVIPVSFEETD 120

Query: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180
           DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA
Sbjct: 121 DYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVA 180

Query: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKF 240
           VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKF
Sbjct: 181 VDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKF 240

Query: 241 ESLELESDTSASQPPVSTCTTTCPFSL-VFFLISTYHFILFP 279
           ESLELESDTS +QPPVSTCT  CPFSL  FFLI  YHF LFP
Sbjct: 241 ESLELESDTSDTQPPVSTCTMACPFSLPFFFLIFPYHFFLFP 282

[Close]

BLAST of Lsi05G022000 vs. NCBI nr
Match: XP_011650638.1 (metalloendoproteinase 4-MMP [Cucumis sativus])

HSP 1 Score: 479.9 bits (1234), Expect = 1.4e-131
Identity = 241/275 (87.64%), Postives = 251/275 (91.27%), Query Frame = 0


Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYV 60
           MFLPL L+LFFFLCTP CLP PTTL Q PT+AV FRS+S+S        LH PHAT RYV
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNPTSAVIFRSDSSS--------LHNPHATERYV 60

Query: 61  FFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYG 120
           FFPGKPRWTRRMPMVLTYAFFK+NW+SNLS++DVR VFRKAFSKWAHVIPVSFEETDDYG
Sbjct: 61  FFPGKPRWTRRMPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYG 120

Query: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180
           YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL
Sbjct: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180

Query: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESL 240
           ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESL
Sbjct: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240

Query: 241 ELESDTSASQPPVSTCTTTCPFSL-VFFLISTYHF 275
           ELESDTSASQPPVSTCT  CPFSL  FFL   +HF
Sbjct: 241 ELESDTSASQPPVSTCTLACPFSLPFFFLFFPHHF 267

[Close]

BLAST of Lsi05G022000 vs. NCBI nr
Match: KAE8650215.1 (hypothetical protein Csa_010775 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 1.2e-125
Identity = 229/255 (89.80%), Postives = 238/255 (93.33%), Query Frame = 0


Query: 1   MFLPLTLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPHATARYV 60
           MFLPL L+LFFFLCTP CLP PTTL Q PT+AV FRS+S+S        LH PHAT RYV
Sbjct: 1   MFLPLLLLLFFFLCTPSCLPYPTTLPQNPTSAVIFRSDSSS--------LHNPHATERYV 60

Query: 61  FFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEETDDYG 120
           FFPGKPRWTRRMPMVLTYAFFK+NW+SNLS++DVR VFRKAFSKWAHVIPVSFEETDDYG
Sbjct: 61  FFPGKPRWTRRMPMVLTYAFFKDNWMSNLSLEDVRAVFRKAFSKWAHVIPVSFEETDDYG 120

Query: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180
           YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL
Sbjct: 121 YADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSAVAVDL 180

Query: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPNFKFESL 240
           ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPNFKFESL
Sbjct: 181 ESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPNFKFESL 240

Query: 241 ELESDTSASQPPVST 256
           ELESDTSASQPPVST
Sbjct: 241 ELESDTSASQPPVST 247

[Close]

BLAST of Lsi05G022000 vs. NCBI nr
Match: XP_023539433.1 (metalloendoproteinase 4-MMP-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 432.2 bits (1110), Expect = 3.4e-117
Identity = 222/286 (77.62%), Postives = 238/286 (83.22%), Query Frame = 0


Query: 1   MFLPL------TLVLFFFLCTPPCLPSPTTLRQKPTAAVTFRSNSTSLRWRVSNALHRPH 60
           MFLPL       L+  FFLC PP +PS         +AVTFR NST+ RWRVS+ LH PH
Sbjct: 1   MFLPLIPPSRYLLLALFFLCLPPIIPS---------SAVTFRPNSTARRWRVSDTLHGPH 60

Query: 61  ATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFE 120
           ATARYV+FPGKPRWTRRMPMVLTYAF KENW+SNLS+KDV+ VFR AFSKWAHVIPV FE
Sbjct: 61  ATARYVYFPGKPRWTRRMPMVLTYAFLKENWVSNLSLKDVKFVFRTAFSKWAHVIPVRFE 120

Query: 121 ETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKS 180
           ET+DYG+ADIKIGFYRGDH DGQ FDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE EKS
Sbjct: 121 ETEDYGFADIKIGFYRGDHGDGQPFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEVEKS 180

Query: 181 AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNPN 240
           AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLE+DDVEGVQALYGSNPN
Sbjct: 181 AVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEVDDVEGVQALYGSNPN 240

Query: 241 FKFESLELESDTSASQPPVST--CTTTCPFSLVFFLISTYHFILFP 279
           F+FES ELESDTSA+  PVST   T   P S  FF   T +F +FP
Sbjct: 241 FRFESSELESDTSATHAPVSTWIMTWNFPISFFFFFFFTSNFFVFP 277

[Close]

BLAST of Lsi05G022000 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein )

HSP 1 Score: 283.9 bits (725), Expect = 1.4e-76
Identity = 136/196 (69.39%), Postives = 161/196 (82.14%), Query Frame = 0


Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           H   +YV+FPG+PRWTR +P+ LTYAF +EN    L+  D+R VFR+AF KWA VIPVSF
Sbjct: 120 HTGKKYVYFPGRPRWTRDVPLKLTYAFSQENLTPYLAPTDIRRVFRRAFGKWASVIPVSF 179

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEK 173
            ET+DY  ADIKIGF+ GDH DG+ FDGVLGVLAH+FSPE GRLHLD AETWAVDF++EK
Sbjct: 180 IETEDYVIADIKIGFFNGDHGDGEPFDGVLGVLAHTFSPENGRLHLDKAETWAVDFDEEK 239

Query: 174 SAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSNP 233
           S+VAVDLESVA HEIGH+LGLGHSSV+++ MYP+LKPR KK NL MDDV GVQ+LYG+NP
Sbjct: 240 SSVAVDLESVAVHEIGHVLGLGHSSVKDAAMYPTLKPRSKKVNLNMDDVVGVQSLYGTNP 299

Query: 234 NFKFESLELESDTSAS 250
           NF   SL L S+TS +
Sbjct: 300 NFTLNSL-LASETSTN 314

[Close]

BLAST of Lsi05G022000 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein )

HSP 1 Score: 244.6 bits (623), Expect = 9.5e-65
Identity = 122/194 (62.89%), Postives = 144/194 (74.23%), Query Frame = 0


Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           H TA Y +F GKP+W R     LTYA  K + +  L+ +DV+TVFR+AFS+W+ VIPVSF
Sbjct: 145 HTTAHYTYFNGKPKWNRD---TLTYAISKTHKLDYLTSEDVKTVFRRAFSQWSSVIPVSF 204

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFE-KE 173
           EE DD+  AD+KIGFY GDH DG  FDGVLG LAH+F+PE GRLHLDAAETW VD + K 
Sbjct: 205 EEVDDFTTADLKIGFYAGDHGDGLPFDGVLGTLAHAFAPENGRLHLDAAETWIVDDDLKG 264

Query: 174 KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYGSN 233
            S VAVDLESVATHEIGHLLGLGHSS   +VMYPSL+PR KK +L +DDV GV  LYG N
Sbjct: 265 SSEVAVDLESVATHEIGHLLGLGHSSQESAVMYPSLRPRTKKVDLTVDDVAGVLKLYGPN 324

Query: 234 PNFKFESLELESDT 247
           P  + +SL    D+
Sbjct: 325 PKLRLDSLTQSEDS 335

[Close]

BLAST of Lsi05G022000 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase )

HSP 1 Score: 199.5 bits (506), Expect = 3.5e-51
Identity = 98/185 (52.97%), Postives = 128/185 (69.19%), Query Frame = 0


Query: 54  HATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSF 113
           HA  RY  FPG+PRW R     LTYAF  +N ++    ++V++VF +AF +W+ V  ++F
Sbjct: 150 HAVKRYTLFPGEPRWPRNR-RDLTYAFDPKNPLT----EEVKSVFSRAFGRWSDVTALNF 209

Query: 114 EETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKE- 173
             ++ +  +DI IGFY GDH DG+ FDGVLG LAH+FSP  G+ HLDA E W V  + + 
Sbjct: 210 TLSESFSTSDITIGFYTGDHGDGEPFDGVLGTLAHAFSPPSGKFHLDADENWVVSGDLDS 269

Query: 174 --KSAVAVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYG 233
                 AVDLESVA HEIGHLLGLGHSSV ES+MYP++   ++K +L  DDVEG+Q LYG
Sbjct: 270 FLSVTAAVDLESVAVHEIGHLLGLGHSSVEESIMYPTITTGKRKVDLTNDDVEGIQYLYG 329

Query: 234 SNPNF 236
           +NPNF
Sbjct: 330 ANPNF 329

[Close]

BLAST of Lsi05G022000 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein )

HSP 1 Score: 191.8 bits (486), Expect = 7.3e-49
Identity = 96/188 (51.06%), Postives = 123/188 (65.43%), Query Frame = 0


Query: 52  RPHATARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPV 111
           R HA   Y FFPG+PRW R     LTYAF   N ++    ++V++VF +AF++W  V P+
Sbjct: 152 RFHAVKHYSFFPGEPRWPRNR-RDLTYAFDPRNALT----EEVKSVFSRAFTRWEEVTPL 211

Query: 112 SFEETDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEK 171
           +F   + +  +DI IGFY G+H DG+ FDG +  LAH+FSP  G  HLD  E W V  E 
Sbjct: 212 TFTRVERFSTSDISIGFYSGEHGDGEPFDGPMRTLAHAFSPPTGHFHLDGEENWIVSGEG 271

Query: 172 EKSAV----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQA 231
               +    AVDLESVA HEIGHLLGLGHSSV  S+MYP+++   +K +L  DDVEGVQ 
Sbjct: 272 GDGFISVSEAVDLESVAVHEIGHLLGLGHSSVEGSIMYPTIRTGRRKVDLTTDDVEGVQY 331

Query: 232 LYGSNPNF 236
           LYG+NPNF
Sbjct: 332 LYGANPNF 334

[Close]

BLAST of Lsi05G022000 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein )

HSP 1 Score: 183.0 bits (463), Expect = 3.4e-46
Identity = 89/184 (48.37%), Postives = 122/184 (66.30%), Query Frame = 0


Query: 56  TARYVFFPGKPRWTRRMPMVLTYAFFKENWISNLSIKDVRTVFRKAFSKWAHVIPVSFEE 115
           T +Y FFPGKPRW +R    LTYAF  +N +++    +V+ VF +AF++WA V P++F  
Sbjct: 140 TEKYSFFPGKPRWPKR-KRDLTYAFAPQNNLTD----EVKRVFSRAFTRWAEVTPLNFTR 199

Query: 116 TDDYGYADIKIGFYRGDHSDGQAFDGVLGVLAHSFSPEIGRLHLDAAETWAVDFEKEKSA 175
           ++    ADI IGF+ G+H DG+ FDG +G LAH+ SP  G LHLD  E W +   +    
Sbjct: 200 SESILRADIVIGFFSGEHGDGEPFDGAMGTLAHASSPPTGMLHLDGDEDWLISNGEISRR 259

Query: 176 V-----AVDLESVATHEIGHLLGLGHSSVRESVMYPSLKPREKKANLEMDDVEGVQALYG 235
           +      VDLESVA HEIGHLLGLGHSSV +++M+P++   ++K  L  DD+EG+Q LYG
Sbjct: 260 ILPVTTVVDLESVAVHEIGHLLGLGHSSVEDAIMFPAISGGDRKVELAKDDIEGIQHLYG 318

The following BLAST results are available for this feature:

BLAST of Lsi05G022000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWW6	2.0e-75	69.39	Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1	[more]
O23507	1.3e-63	62.89	Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1	[more]
O04529	4.9e-50	52.97	Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1	[more]
Q5XF51	1.0e-47	51.06	Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1	[more]
Q9ZUJ5	4.8e-45	48.37	Metalloendoproteinase 5-MMP OS=Arabidopsis thaliana OX=3702 GN=5MMP PE=1 SV=1	[more]

BLAST of Lsi05G022000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DB58	1.1e-134	88.30	Metalloendoproteinase 4-MMP OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A1S3AUH8	1.1e-134	88.30	metalloendoproteinase 4-MMP OS=Cucumis melo OX=3656 GN=LOC103483123 PE=4 SV=1	[more]
A0A0A0L2Y8	7.0e-132	87.64	ZnMc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G117950 PE=4 S...	[more]
A0A6J1IFQ0	1.6e-115	77.11	metalloendoproteinase 4-MMP-like OS=Cucurbita maxima OX=3661 GN=LOC111472903 PE=...	[more]
A0A6J1FZ72	5.9e-107	82.16	metalloendoproteinase 4-MMP-like OS=Cucurbita moschata OX=3662 GN=LOC111449256 P...	[more]

BLAST of Lsi05G022000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038903989.1	1.5e-141	91.04	metalloendoproteinase 4-MMP-like [Benincasa hispida]	[more]
XP_008437790.1	2.4e-134	88.30	PREDICTED: metalloendoproteinase 4-MMP [Cucumis melo] >KAA0048832.1 metalloendop...	[more]
XP_011650638.1	1.4e-131	87.64	metalloendoproteinase 4-MMP [Cucumis sativus]	[more]
KAE8650215.1	1.2e-125	89.80	hypothetical protein Csa_010775 [Cucumis sativus]	[more]
XP_023539433.1	3.4e-117	77.62	metalloendoproteinase 4-MMP-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi05G022000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G45040.1	1.4e-76	69.39	Matrixin family protein	[more]
AT4G16640.1	9.5e-65	62.89	Matrixin family protein	[more]
AT1G70170.1	3.5e-51	52.97	matrix metalloproteinase	[more]
AT1G24140.1	7.3e-49	51.06	Matrixin family protein	[more]
AT1G59970.1	3.4e-46	48.37	Matrixin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021190	Peptidase M10A	PRINTS	PR00138	MATRIXIN	coord: 217..230 score: 58.8 coord: 122..150 score: 53.24 coord: 183..208 score: 55.77 coord: 98..113 score: 41.31
IPR006026	Peptidase, metallopeptidase	SMART	SM00235	col_5	coord: 64..231 e-value: 1.9E-43 score: 160.3
IPR001818	Peptidase M10, metallopeptidase	PFAM	PF00413	Peptidase_M10	coord: 71..230 e-value: 3.4E-48 score: 163.5
IPR024079	Metallopeptidase, catalytic domain superfamily	GENE3D	3.40.390.10	Collagenase (Catalytic Domain)	coord: 25..235 e-value: 1.7E-55 score: 190.1
None	No IPR available	PANTHER	PTHR10201:SF245	METALLOENDOPROTEINASE 4-MMP	coord: 46..269
None	No IPR available	PANTHER	PTHR10201	MATRIX METALLOPROTEINASE	coord: 46..269
None	No IPR available	SUPERFAMILY	55486	Metalloproteases ("zincins"), catalytic domain	coord: 61..235
IPR033739	Peptidase M10A, catalytic domain	CDD	cd04278	ZnMc_MMP	coord: 67..230 e-value: 2.17663E-65 score: 199.738

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G022000.1	Lsi05G022000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030574	collagen catabolic process
biological_process	GO:0030198	extracellular matrix organization
biological_process	GO:0006508	proteolysis
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0031012	extracellular matrix
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0008237	metallopeptidase activity