Lsi05G021190 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G021190
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	non-specific lipid-transfer protein-like
Location	chr05: 28057903 .. 28058265 (-)
RNA-Seq Expression	Lsi05G021190
Synteny	Lsi05G021190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

mRNA sequence

ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

Coding sequence (CDS)

ATGGGGGCCCTAGCCTTCGTCGCCGTGTTCACATGCTCCCTGATGGTCGTTCTGTCTCAGAATGAGGACGTAGAAAGTTGTGTACCGGTGGCGCAGGAGCTATCACCATGTTTGGGCTTCATCAAAGGCAGCGACAGCGCGTTTGGTGGTGAAAATCCATCGCCGTCGTGCTGCAGCGGCGTTAAAAAGTTAGCGGGCGATGCTAAAACGAAGAAAGATAAGGTTGCTCTGTGCGAATGCATCAAGAAGACTTTGTCGATGATCGGACCTTATGATTCGAGTCGCATCCCTTTGATTCCAAAAGAATGTGGAATTCCCGTCCAAATCCCTCCCATCGACAATTCCACTGATTGCTCATCGTAA

Protein sequence

MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCSS

Homology

[Close]

BLAST of Lsi05G021190 vs. ExPASy Swiss-Prot
Match: O04004 (Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.5e-14
Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 0


Query: 26  SCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKTL 85
           +C  V   L+PC GF+        G+ PS +CC+GV  L    KTK D+VA+C CIK+  
Sbjct: 29  TCDTVQNILAPCAGFLT-------GQEPSKACCTGVNNLNNSRKTKADRVAVCNCIKELT 88

Query: 86  SMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
             I  YD  R+PL+  +CG+    P +D + DCS
Sbjct: 89  KSIA-YDPKRMPLLSTKCGVKPDFPAVDKNLDCS 114

[Close]

BLAST of Lsi05G021190 vs. ExPASy Swiss-Prot
Match: O04404 (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica OX=33127 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.6e-13
Identity = 37/97 (38.14%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  V + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+  
Sbjct: 39  ETCGTVVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGLQRVHACECIQTA 98

Query: 85  LSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 99  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 130

[Close]

BLAST of Lsi05G021190 vs. ExPASy Swiss-Prot
Match: P43217 (Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica OX=33127 GN=PMAI PE=1 SV=3)

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13
Identity = 36/97 (37.11%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  + + L PCL F++G +     + PS  CCSG K+L G+ KT   +V  CECI+  
Sbjct: 2   ETCGTMVRALMPCLPFVQGKE-----KEPSKGCCSGAKRLDGETKTGPQRVHACECIQTA 61

Query: 85  LSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 62  MKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 93

[Close]

BLAST of Lsi05G021190 vs. ExPASy Swiss-Prot
Match: P55958 (Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica OX=33127 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.7e-13
Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0


Query: 25  ESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCECIKKT 84
           E+C  V Q++ PCL F+KG +     + PS  CCSG KKL+ + KT + K   C+CI + 
Sbjct: 33  EACGKVVQDIMPCLHFVKGEE-----KEPSKECCSGTKKLSEEVKTTEQKREACKCIVRA 92

Query: 85  LSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
              I    +  +  +PK+C I   +PPI    DCS
Sbjct: 93  TKGISGIKNELVAEVPKKCDIKTTLPPITADFDCS 122

[Close]

BLAST of Lsi05G021190 vs. ExPASy Swiss-Prot
Match: Q40905 (Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica OX=33127 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 7.9e-13
Identity = 43/119 (36.13%), Postives = 62/119 (52.10%), Query Frame = 0


Query: 4   LAFVAVFTCSLMVVLSQNE-DVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 63
           +A V V+T S  V  +      E+C  V   L PCL F++G +     + PS  CCSG K
Sbjct: 16  VAAVLVWTSSASVAPAPAPGSEETCGTVVGALMPCLPFVQGKE-----KEPSKGCCSGAK 75

Query: 64  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGI-PVQIPPIDNSTDCSS 121
           +L G+ KT   +V  CECI+  +      D   +  +PK CGI   ++PPID + DC +
Sbjct: 76  RLDGETKTGPQRVHACECIQTAMKTYSDIDGKLVSEVPKHCGIVDSKLPPIDVNMDCKT 129

[Close]

BLAST of Lsi05G021190 vs. ExPASy TrEMBL
Match: A0A6J1ECH4 (non-specific lipid-transfer protein-like OS=Cucurbita moschata OX=3662 GN=LOC111431953 PE=3 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 6.4e-50
Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           +GALAFVA+FTCS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+G
Sbjct: 11  IGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTG 70

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           V KL  DAKTKKD+V LCECIK +LSMIGPYD SRIPLIP++CGIP QIPPID+STDCS
Sbjct: 71  VGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 129

[Close]

BLAST of Lsi05G021190 vs. ExPASy TrEMBL
Match: A0A6J1IV21 (non-specific lipid-transfer protein-like OS=Cucurbita maxima OX=3661 GN=LOC111479562 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.5e-48
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           +GALAFVA+F C  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPSPSCC+G
Sbjct: 11  IGALAFVAIFICPQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSGFGGENPSPSCCTG 70

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           V KL  DAKTKKD+V LCECIK +LSMIGPYD SRIPLIP++CGIP QIPPID+STDCS
Sbjct: 71  VGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 129

[Close]

BLAST of Lsi05G021190 vs. ExPASy TrEMBL
Match: A0A5A7U0R4 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G001070 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.0e-44
Identity = 93/117 (79.49%), Postives = 102/117 (87.18%), Query Frame = 0


Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAV TCSLMVVLSQ EDVESCVPVAQ LSPCLGFIKGS        PS SCCSGVK
Sbjct: 9   SLAFVAVLTCSLMVVLSQTEDVESCVPVAQSLSPCLGFIKGSG------KPSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LAG+ KTKKDKVALCECIKK+L+MIGPYD +RIPLIPK+CGI VQIPPI+NST+CS
Sbjct: 69  QLAGNTKTKKDKVALCECIKKSLAMIGPYDPTRIPLIPKQCGISVQIPPINNSTNCS 119

[Close]

BLAST of Lsi05G021190 vs. ExPASy TrEMBL
Match: A0A0A0L5X1 (Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G119620 PE=3 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.5e-43
Identity = 91/117 (77.78%), Postives = 101/117 (86.32%), Query Frame = 0


Query: 3   ALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVK 62
           +LAFVAVFTCSLMVVLSQNED+ESCVPVAQ L+PCLGFIKG+        PS SCCSGVK
Sbjct: 9   SLAFVAVFTCSLMVVLSQNEDLESCVPVAQALAPCLGFIKGNG------KPSASCCSGVK 68

Query: 63  KLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           +LA D KTKKDKVALCEC+KK+LS+IG YD SRIPLIPK+CG+ VQIPPI NSTDCS
Sbjct: 69  QLARDTKTKKDKVALCECVKKSLSVIGTYDPSRIPLIPKQCGVSVQIPPIKNSTDCS 119

[Close]

BLAST of Lsi05G021190 vs. ExPASy TrEMBL
Match: A0A6J1IBN9 (non-specific lipid-transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111473775 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 9.9e-43
Identity = 89/119 (74.79%), Postives = 98/119 (82.35%), Query Frame = 0


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           + AL F+A+ T S+MV LSQN D+ SC+ VAQELSPCL FIKGSD  F GENP PSCCSG
Sbjct: 11  ISALTFIAMLTSSMMVALSQNVDMGSCILVAQELSPCLSFIKGSDGGFLGENPPPSCCSG 70

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           V KLA DAKTK DKV LCECIKK+LSMIG YD +RIP IP+ CGIPVQIPPIDNSTDCS
Sbjct: 71  VTKLAADAKTKNDKVDLCECIKKSLSMIGAYDPNRIPSIPEGCGIPVQIPPIDNSTDCS 129

[Close]

BLAST of Lsi05G021190 vs. NCBI nr
Match: XP_038891281.1 (non-specific lipid-transfer protein Cw18-like [Benincasa hispida])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 112/119 (94.12%), Postives = 114/119 (95.80%), Query Frame = 0


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           MGALAFVAV TCSLMV LSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGE+PSPSCCSG
Sbjct: 11  MGALAFVAVLTCSLMVALSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGEHPSPSCCSG 70

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           VKKL GDAKTKKDKV LCECIKK+LSMIGPYD SRIPLIPKECGIPVQIPPIDNSTDCS
Sbjct: 71  VKKLVGDAKTKKDKVDLCECIKKSLSMIGPYDPSRIPLIPKECGIPVQIPPIDNSTDCS 129

[Close]

BLAST of Lsi05G021190 vs. NCBI nr
Match: XP_022924453.1 (non-specific lipid-transfer protein-like [Cucurbita moschata] >KAG6582670.1 hypothetical protein SDJN03_22672, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 206.5 bits (524), Expect = 1.3e-49
Identity = 97/119 (81.51%), Postives = 108/119 (90.76%), Query Frame = 0


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           +GALAFVA+FTCS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+G
Sbjct: 11  IGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTG 70

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           V KL  DAKTKKD+V LCECIK +LSMIGPYD SRIPLIP++CGIP QIPPID+STDCS
Sbjct: 71  VGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 129

[Close]

BLAST of Lsi05G021190 vs. NCBI nr
Match: KAG7019070.1 (Thioredoxin-like 2-2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 203.8 bits (517), Expect = 8.6e-49
Identity = 96/119 (80.67%), Postives = 107/119 (89.92%), Query Frame = 0


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           +GALAFVA+FTCS MV LSQ+ DVE+C+PV QELSPCLGFIKGSDSAFGGENPSPSCC+G
Sbjct: 254 IGALAFVAIFTCSQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSAFGGENPSPSCCTG 313

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           V KL  DAKTKK +V LCECIK +LSMIGPYD SRIPLIP++CGIP QIPPID+STDCS
Sbjct: 314 VGKLVDDAKTKKHRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 372

[Close]

BLAST of Lsi05G021190 vs. NCBI nr
Match: XP_022980045.1 (non-specific lipid-transfer protein-like [Cucurbita maxima])

HSP 1 Score: 200.7 bits (509), Expect = 7.3e-48
Identity = 94/119 (78.99%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           +GALAFVA+F C  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPSPSCC+G
Sbjct: 11  IGALAFVAIFICPQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSGFGGENPSPSCCTG 70

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           V KL  DAKTKKD+V LCECIK +LSMIGPYD SRIPLIP++CGIP QIPPID+STDCS
Sbjct: 71  VGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 129

[Close]

BLAST of Lsi05G021190 vs. NCBI nr
Match: XP_023526882.1 (non-specific lipid-transfer protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 197.2 bits (500), Expect = 8.0e-47
Identity = 93/119 (78.15%), Postives = 104/119 (87.39%), Query Frame = 0


Query: 1   MGALAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSG 60
           +GALAFVA+F C  MV LSQ+ DVE+C+PV QELSPCLGFIKGSDS FGGENPS SCC+G
Sbjct: 11  IGALAFVAIFICLQMVTLSQSADVEACIPVVQELSPCLGFIKGSDSGFGGENPSSSCCTG 70

Query: 61  VKKLAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECGIPVQIPPIDNSTDCS 120
           V KL  DAKTKKD+V LCECIK +LSMIGPYD SRIPLIP++CGIP QIPPID+STDCS
Sbjct: 71  VGKLVDDAKTKKDRVDLCECIKTSLSMIGPYDPSRIPLIPEDCGIPAQIPPIDSSTDCS 129

[Close]

BLAST of Lsi05G021190 vs. TAIR 10
Match: AT2G18370.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 7.8e-08
Identity = 36/119 (30.25%), Postives = 54/119 (45.38%), Query Frame = 0


Query: 4   LAFVAVFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKK 63
           LA ++V    +  +   +E   SC  V Q+L PC+ ++       G  NP  +CC GVK 
Sbjct: 7   LAIISVL--GIFFIPRYSESAISCSVVLQDLQPCVSYLTS-----GSGNPPETCCDGVKS 66

Query: 64  LAGDAKTKKDKVALCECIKKTLSMIGPYDSSRIPLIPKECG--IPVQIPPIDNSTDCSS 121
           LA    T  DK A C+CIK   + +          +   CG  +PV   P   + DC++
Sbjct: 67  LAAATTTSADKKAACQCIKSVANSV-TVKPELAQALASNCGASLPVDASP---TVDCTT 114

[Close]

BLAST of Lsi05G021190 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 52.0 bits (123), Expect = 3.9e-07
Identity = 35/111 (31.53%), Postives = 52/111 (46.85%), Query Frame = 0


Query: 14  LMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKD 73
           L++ L   E   SC  V  +L PCL ++       GG  P+  CC+G+  L   A+T  D
Sbjct: 10  LVLALHCGEAAVSCNTVIADLYPCLSYV-----TQGGPVPT-LCCNGLTTLKSQAQTSVD 69

Query: 74  KVALCECIKKTLS--MIGPYDSSRIPLIPKECGI--PVQIPPIDNSTDCSS 121
           +  +C CIK  +    + P        +P +CG+  P +  P   STDC S
Sbjct: 70  RQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSP---STDCDS 111

[Close]

BLAST of Lsi05G021190 vs. TAIR 10
Match: AT3G08770.2 (lipid transfer protein 6 )

HSP 1 Score: 52.0 bits (123), Expect = 3.9e-07
Identity = 35/111 (31.53%), Postives = 52/111 (46.85%), Query Frame = 0


Query: 14  LMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKD 73
           L++ L   E   SC  V  +L PCL ++       GG  P+  CC+G+  L   A+T  D
Sbjct: 10  LVLALHCGEAAVSCNTVIADLYPCLSYV-----TQGGPVPT-LCCNGLTTLKSQAQTSVD 69

Query: 74  KVALCECIKKTLS--MIGPYDSSRIPLIPKECGI--PVQIPPIDNSTDCSS 121
           +  +C CIK  +    + P        +P +CG+  P +  P   STDC S
Sbjct: 70  RQGVCRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSP---STDCDS 111

[Close]

BLAST of Lsi05G021190 vs. TAIR 10
Match: AT5G01870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 5.1e-07
Identity = 33/103 (32.04%), Postives = 52/103 (50.49%), Query Frame = 0


Query: 21  NEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDAKTKKDKVALCEC 80
           +E   SC  V   L PC+ ++       GG  P  SCC+G++ L+  A +  DK  +C C
Sbjct: 20  SEAAISCNAVQANLYPCVVYV-----VQGGAIPY-SCCNGIRMLSKQATSASDKQGVCRC 79

Query: 81  IKKTLSMIGPYDS---SRIPLIPKECGIPVQIPPIDNSTDCSS 121
           IK  +  +  Y S    +   +P +CG+ +    ID ST+C+S
Sbjct: 80  IKSVVGRVS-YSSIYLKKAAALPGKCGVKLPY-KIDPSTNCNS 114

[Close]

BLAST of Lsi05G021190 vs. TAIR 10
Match: AT3G51600.1 (lipid transfer protein 5 )

HSP 1 Score: 47.0 bits (110), Expect = 1.3e-05
Identity = 32/113 (28.32%), Postives = 51/113 (45.13%), Query Frame = 0


Query: 9   VFTCSLMVVLSQNEDVESCVPVAQELSPCLGFIKGSDSAFGGENPSPSCCSGVKKLAGDA 68
           V  C L+     +E   SC  V   L  C  ++       GG  P   CCSGV++L   A
Sbjct: 11  VIVCMLVTAPMASEAAISCGAVTGSLGQCYNYL-----TRGGFIPR-GCCSGVQRLNSLA 70

Query: 69  KTKKDKVALCECIKKTLSMIGP-YDSSRIPLIPKECGIPVQIPPIDNSTDCSS 121
           +T +D+   C CI+     +G   ++ R   +P  C + +   PI   T+C++
Sbjct: 71  RTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISY-PISARTNCNT 116

The following BLAST results are available for this feature:

BLAST of Lsi05G021190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04004	2.5e-14	40.43	Non-specific lipid-transfer protein OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1	[more]
O04404	1.6e-13	38.14	Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica OX=33127 PE...	[more]
P43217	2.7e-13	37.11	Probable non-specific lipid-transfer protein (Fragment) OS=Parietaria judaica OX...	[more]
P55958	2.7e-13	37.89	Probable non-specific lipid-transfer protein 2 OS=Parietaria judaica OX=33127 PE...	[more]
Q40905	7.9e-13	36.13	Probable non-specific lipid-transfer protein 1 OS=Parietaria judaica OX=33127 PE...	[more]

BLAST of Lsi05G021190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ECH4	6.4e-50	81.51	non-specific lipid-transfer protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1IV21	3.5e-48	78.99	non-specific lipid-transfer protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A5A7U0R4	9.0e-44	79.49	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0L5X1	4.5e-43	77.78	Non-specific lipid-transfer protein OS=Cucumis sativus OX=3659 GN=Csa_3G119620 P...	[more]
A0A6J1IBN9	9.9e-43	74.79	non-specific lipid-transfer protein 3-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of Lsi05G021190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891281.1	1.1e-56	94.12	non-specific lipid-transfer protein Cw18-like [Benincasa hispida]	[more]
XP_022924453.1	1.3e-49	81.51	non-specific lipid-transfer protein-like [Cucurbita moschata] >KAG6582670.1 hypo...	[more]
KAG7019070.1	8.6e-49	80.67	Thioredoxin-like 2-2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022980045.1	7.3e-48	78.99	non-specific lipid-transfer protein-like [Cucurbita maxima]	[more]
XP_023526882.1	8.0e-47	78.15	non-specific lipid-transfer protein-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi05G021190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G18370.1	7.8e-08	30.25	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G08770.1	3.9e-07	31.53	lipid transfer protein 6	[more]
AT3G08770.2	3.9e-07	31.53	lipid transfer protein 6	[more]
AT5G01870.1	5.1e-07	32.04	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G51600.1	1.3e-05	28.32	lipid transfer protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 26..42 score: 34.93 coord: 73..88 score: 32.69 coord: 90..107 score: 23.16 coord: 109..120 score: 41.54
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 8..119
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 27..118 e-value: 3.9E-10 score: 49.7
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 7..108 e-value: 8.2E-6 score: 25.9
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 26..120 e-value: 1.7E-23 score: 84.8
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 26..119
None	No IPR available	PANTHER	PTHR33076:SF73	NON-SPECIFIC LIPID-TRANSFER PROTEIN	coord: 8..119
None	No IPR available	CDD	cd01960	nsLTP1	coord: 26..119 e-value: 7.78647E-25 score: 88.1757

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G021190.1	Lsi05G021190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding