Lsi05G020470 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G020470
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
Location	chr05: 27420524 .. 27422791 (-)
RNA-Seq Expression	Lsi05G020470
Synteny	Lsi05G020470

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCACTATTTCTGTTAAATCCATTGATTTTTTTTATTATTTTGTTCAGACTCATAAACCATGAGAATTTGCTTGTCACGTTCTTCTCGTTTACCCGTCTTCATTCTCATCGTCCTCGTCGCCGGCATTTTCAAGGACGCCGGATTCAATCGCTTCGCCGACGGTGGTCAGCGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGATGATGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCCGCCTCTAGTGATTTCGACCTCCCGCCGGCCGATTTATCGAAGATGGAGTTTACGGAGATTCAGGCTGAGATGACGAAGCGGCATTCTGGTCCAGCTATGGGATTTGTCAAGCTTCGTCTCGGCGTTCGGCGGACTCCGGTTAGAAATTTCGCTATTCACCTTTACTGAGATGTTAATTAATTTCATGCCGGAAAGTGACGAACAATCCAATTGCTATTGGTCGATTTGGTTCCGGCTTCTTTACTGAAGTGGTTTTTGAATTCGAATACAAGTCGAATCTGGACTTTGCGCTTGGGAATTGGTGTAAACGGATGCTAATTTGAAACCAAAAACCTTGAAAACCTCGACGAACTTGTGTGTTTTCTGTTAATTTGAAGTGCATTCGGCTCCTAATTGTTAAATTCGTCGACTAACATCTGTATATGCTCACTTATTACCAGCATTTATCGCTCTTGATTTCAGGATATGGTGGCTGAGATTGCTATGCAATGGACGAAAGTTCTGAAAACTGGATCCGTGGAGGCAAAATTTATGGCGGTAGACCTTAATACACTCATGTTCACAATGGACAGAGGACAAGACTTAAGTGAGGTACGCTTTAATTGCCCGATTCTGGAACTGAGACTCCTCAATTGCTCTCCAATTTGTTTGAACAATAGTTTTCACACTCAATTTTGGTTTCTGGGATCCAATTCAAAAGGCCTAGCCCCAATTCCGGTTATGTATATAGTTCAAGTTGAACAGTTTTGGACCATTCTAATATTGTCATTGAAATTTGAATTTAAAATTGTAAAACTTCTAATAGTGTTGTTGGTTATAGTGTTAATGAGAATCCGCATTGGAAAAATCAAGATAAGTCTTATGTATTATCAACTTATTAGAAATATTCTTTAACCCATGAGAAAAAAATCACATTAGAATATAAGTAGAGCTCAATTTTGTTTCACTAGATCTATAATCCATTTAATAAATGAAGTATAAAAATCCACAATATAAGGAATAGCTCGAGAGTGAAGTTGGTATTGTATTCCAAATTAAGCTGTTTGTTAAGAACTTGCTTCTTAAATTTACTTTTATTCAGAAAACTCGTTGGATAGAAAAATTCTTTTAATTGAACAAAAAACTCTTTTAAATGTGGAACGCCTTTTGTTTTTGTTCTTACATGCTTTTTTTTTAAAACTTAAAATCACTCTTCATGTGAAAATCTCAATGTTTATAACTCAAACTTAAGGCATCACAAACTAATAAAAATGAAAATGTTAACACCATTCCTCACGCCTAGTTTTGATCAATTTTGTTATGGGCTGTTCCTCTGTTTTCATTTTCAGAAAGAACCCATCAAACACAACTTTCAGTTCAAAATTTTAACATAGTTTGTATCACATGATAATAGCTTTTGAAATTAAGTTTGTTTCTTTAAATTATTCTTTTTAAGAACAGTTGAAGGAGTTTGTGTTGAGCCAAGCAGAGTCATACGAGATCAAAATTGGGGACCAAGTATTTCGAAGACCTGGAGATCCTCCTCTGGAAGAAGTCATTGAGTTGCTCCAAAAAGAAAAGAACAAAGCTGATGGCACCAGTCGTTCAGAAAATGCTGGGCCATTGCATCAGGAATTGTAGAATTAATATGGTACCAATCTTCAACTTGAAACTAAGATTTTTGGATTTGTTTGTTTGTTTAGCTTTTGAATCTCGTTGTAGCCATGGATGGAAATTATGGAAAGAAAAAATCATCTATTTCCCCTTTAATACATATGAATTTGTTGTTCATAGTAGAAGTTATTCGACGAGGCTGTCATGATATAGCTGACAGTTTTACATTGTTGGATGTATGAGAAAAATATGCATCAAATTTACTGTTAGTAGGTAAAATTTTGAATCTACACCCAACTGTTATTACGAGACGTACTTGAATAATTTTTTCATAGACTCTTGGATACTGTAGAGTAAATGTTCTGTGTGGACTTTTTAATTTAAATTATAATAAAAGGTCATGTGTATAGTAGAATT

mRNA sequence

CTCCACTATTTCTGTTAAATCCATTGATTTTTTTTATTATTTTGTTCAGACTCATAAACCATGAGAATTTGCTTGTCACGTTCTTCTCGTTTACCCGTCTTCATTCTCATCGTCCTCGTCGCCGGCATTTTCAAGGACGCCGGATTCAATCGCTTCGCCGACGGTGGTCAGCGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGATGATGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCCGCCTCTAGTGATTTCGACCTCCCGCCGGCCGATTTATCGAAGATGGAGTTTACGGAGATTCAGGCTGAGATGACGAAGCGGCATTCTGGTCCAGCTATGGGATTTGTCAAGCTTCGTCTCGGCGTTCGGCGGACTCCGGATATGGTGGCTGAGATTGCTATGCAATGGACGAAAGTTCTGAAAACTGGATCCGTGGAGGCAAAATTTATGGCGGTAGACCTTAATACACTCATGTTCACAATGGACAGAGGACAAGACTTAAGTGAGTTGAAGGAGTTTGTGTTGAGCCAAGCAGAGTCATACGAGATCAAAATTGGGGACCAAGTATTTCGAAGACCTGGAGATCCTCCTCTGGAAGAAGTCATTGAGTTGCTCCAAAAAGAAAAGAACAAAGCTGATGGCACCAGTCGTTCAGAAAATGCTGGGCCATTGCATCAGGAATTGTAGAATTAATATGGTACCAATCTTCAACTTGAAACTAAGATTTTTGGATTTGTTTGTTTGTTTAGCTTTTGAATCTCGTTGTAGCCATGGATGGAAATTATGGAAAGAAAAAATCATCTATTTCCCCTTTAATACATATGAATTTGTTGTTCATAGTAGAAGTTATTCGACGAGGCTGTCATGATATAGCTGACAGTTTTACATTGTTGGATGTATGAGAAAAATATGCATCAAATTTACTGTTAGTAGGTAAAATTTTGAATCTACACCCAACTGTTATTACGAGACGTACTTGAATAATTTTTTCATAGACTCTTGGATACTGTAGAGTAAATGTTCTGTGTGGACTTTTTAATTTAAATTATAATAAAAGGTCATGTGTATAGTAGAATT

Coding sequence (CDS)

ATGAGAATTTGCTTGTCACGTTCTTCTCGTTTACCCGTCTTCATTCTCATCGTCCTCGTCGCCGGCATTTTCAAGGACGCCGGATTCAATCGCTTCGCCGACGGTGGTCAGCGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGATGATGAGGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCCGCCTCTAGTGATTTCGACCTCCCGCCGGCCGATTTATCGAAGATGGAGTTTACGGAGATTCAGGCTGAGATGACGAAGCGGCATTCTGGTCCAGCTATGGGATTTGTCAAGCTTCGTCTCGGCGTTCGGCGGACTCCGGATATGGTGGCTGAGATTGCTATGCAATGGACGAAAGTTCTGAAAACTGGATCCGTGGAGGCAAAATTTATGGCGGTAGACCTTAATACACTCATGTTCACAATGGACAGAGGACAAGACTTAAGTGAGTTGAAGGAGTTTGTGTTGAGCCAAGCAGAGTCATACGAGATCAAAATTGGGGACCAAGTATTTCGAAGACCTGGAGATCCTCCTCTGGAAGAAGTCATTGAGTTGCTCCAAAAAGAAAAGAACAAAGCTGATGGCACCAGTCGTTCAGAAAATGCTGGGCCATTGCATCAGGAATTGTAG

Protein sequence

MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAMQWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPGDPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL

Homology

[Close]

BLAST of Lsi05G020470 vs. ExPASy TrEMBL
Match: A0A5A7TZI6 (Mesd domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004750 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.2e-103
Identity = 191/214 (89.25%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC SRSS LPVFILIV+  GI KDAGFNRFADGGQRRIHITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKS SSDFD+PPADLSKM+F EIQAEM KRHSGP MGFVKLRLGVRRTPDMVAEIAM
Sbjct: 61  WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWTKVLKTGSV+AKFMAVDLNTLMFTMDRGQDL+ELKEFVLSQAESYEIKIGD VFRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPPLEEVI+LLQK+KNKADGT  SENA PLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]

BLAST of Lsi05G020470 vs. ExPASy TrEMBL
Match: A0A1S3AVD9 (uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=3 SV=1)

HSP 1 Score: 383.6 bits (984), Expect = 5.2e-103
Identity = 191/214 (89.25%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC SRSS LPVFILIV+  GI KDAGFNRFADGGQRRIHITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKS SSDFD+PPADLSKM+F EIQAEM KRHSGP MGFVKLRLGVRRTPDMVAEIAM
Sbjct: 61  WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWTKVLKTGSV+AKFMAVDLNTLMFTMDRGQDL+ELKEFVLSQAESYEIKIGD VFRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPPLEEVI+LLQK+KNKADGT  SENA PLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]

BLAST of Lsi05G020470 vs. ExPASy TrEMBL
Match: A0A0A0L7G1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122310 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.2e-101
Identity = 187/214 (87.38%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC SRSSRLPVFILIV+ AGI  D GFNRFADGGQRR+HITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSRLPVFILIVIAAGILNDVGFNRFADGGQRRVHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKSAS+DFD+PPADLSKM+  EIQAEM KRHSGP MGFVKLRLGVRRTPD VAEIAM
Sbjct: 61  WGKKKSASNDFDIPPADLSKMDIPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDTVAEIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDL+EL EFVLSQAESYEIKIGD VFRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLNELNEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPPLEEVI+LLQK+KNKADGT  S+N+ PLHQEL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVSSKNSEPLHQEL 214

[Close]

BLAST of Lsi05G020470 vs. ExPASy TrEMBL
Match: A0A6J1FVR6 (uncharacterized protein LOC111447309 OS=Cucurbita moschata OX=3662 GN=LOC111447309 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.2e-96
Identity = 179/214 (83.64%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC S SS LPVF LIVL AGIFKDAGFNRFA+GGQRRIHITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKSASSDFDLPP DLSKME  EIQAEM KR SGP MGFVKLRLGVRRTP+MV  IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWT++LKTGS+EAKFMAVDL+TLMFT+DRGQDL ELKEFV S  ESYEIKIG+Q FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPP+EEVIE+LQK+KNKAD T+ SE+  PLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Lsi05G020470 vs. ExPASy TrEMBL
Match: A0A6J1IAQ9 (uncharacterized protein LOC111473291 OS=Cucurbita maxima OX=3661 GN=LOC111473291 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.2e-94
Identity = 177/214 (82.71%), Postives = 191/214 (89.25%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC S SS LPVF LIVL AGIFKD GFNRFA+GGQRRI ITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIQITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKSASSDFDLPP DLSKME  EIQAEM KR SGP MGFVKLRLGVRRTP+MVA IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWT++LKTGS+EAKFMAVDL+TLMFT+DRGQDL ELKEFV +  ESYEIKIG+Q FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFNHPESYEIKIGEQAFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPP+EEVIE+LQK+KNKAD T+ SE+  PLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Lsi05G020470 vs. NCBI nr
Match: XP_038902444.1 (uncharacterized protein LOC120089088 [Benincasa hispida])

HSP 1 Score: 384.8 bits (987), Expect = 4.8e-103
Identity = 196/214 (91.59%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC SRSSR PVFILIVL AGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSRSSR-PVFILIVLAAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKSASSDFDLPPADLS MEF EIQAEMT RH GP MGFVKLRLGVRRTPDMVAEIAM
Sbjct: 61  WGKKKSASSDFDLPPADLSNMEFQEIQAEMTNRHFGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWTKVLKTGSVEAKFMAVDLNTLMFTM+RG+DL+ELKEFVLSQ++SYEIKIGDQVFRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMERGRDLNELKEFVLSQSQSYEIKIGDQVFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPPLEEVIELLQKEKNKA GT  SE A PLHQEL
Sbjct: 181 DPPLEEVIELLQKEKNKAGGTGSSEKAEPLHQEL 213

[Close]

BLAST of Lsi05G020470 vs. NCBI nr
Match: XP_008438032.1 (PREDICTED: uncharacterized protein LOC103483266 [Cucumis melo] >KAA0048962.1 Mesd domain-containing protein [Cucumis melo var. makuwa] >TYK17605.1 Mesd domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 383.6 bits (984), Expect = 1.1e-102
Identity = 191/214 (89.25%), Postives = 201/214 (93.93%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC SRSS LPVFILIV+  GI KDAGFNRFADGGQRRIHITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKS SSDFD+PPADLSKM+F EIQAEM KRHSGP MGFVKLRLGVRRTPDMVAEIAM
Sbjct: 61  WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWTKVLKTGSV+AKFMAVDLNTLMFTMDRGQDL+ELKEFVLSQAESYEIKIGD VFRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPPLEEVI+LLQK+KNKADGT  SENA PLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]

BLAST of Lsi05G020470 vs. NCBI nr
Match: XP_004133861.1 (uncharacterized protein LOC101221666 [Cucumis sativus])

HSP 1 Score: 378.3 bits (970), Expect = 4.5e-101
Identity = 187/214 (87.38%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC SRSSRLPVFILIV+ AGI  D GFNRFADGGQRR+HITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSRLPVFILIVIAAGILNDVGFNRFADGGQRRVHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKSAS+DFD+PPADLSKM+  EIQAEM KRHSGP MGFVKLRLGVRRTPD VAEIAM
Sbjct: 61  WGKKKSASNDFDIPPADLSKMDIPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDTVAEIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDL+EL EFVLSQAESYEIKIGD VFRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLNELNEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPPLEEVI+LLQK+KNKADGT  S+N+ PLHQEL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVSSKNSEPLHQEL 214

[Close]

BLAST of Lsi05G020470 vs. NCBI nr
Match: KAE8650248.1 (hypothetical protein Csa_010335 [Cucumis sativus])

HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96
Identity = 179/202 (88.61%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC SRSSRLPVFILIV+ AGI  D GFNRFADGGQRR+HITDDLDDVVDDEED+SWK+
Sbjct: 1   MRICFSRSSRLPVFILIVIAAGILNDVGFNRFADGGQRRVHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKSAS+DFD+PPADLSKM+  EIQAEM KRHSGP MGFVKLRLGVRRTPD VAEIAM
Sbjct: 61  WGKKKSASNDFDIPPADLSKMDIPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDTVAEIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDL+EL EFVLSQAESYEIKIGD VFRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLNELNEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTS 203
           DPPLEEVI+LLQK+KNKADGT+
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTT 202

[Close]

BLAST of Lsi05G020470 vs. NCBI nr
Match: XP_023540100.1 (uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 360.1 bits (923), Expect = 1.3e-95
Identity = 179/214 (83.64%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MRICLSRSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKE 60
           MRIC S SS LPVF LIVL AGIFKD GFNRFA+GGQRRIHITDDLDDVVDDEEDESWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKE 60

Query: 61  WGKKKSASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAM 120
           WGKKKSASSDFDLPP DLSKME  EIQAEM KR SGP MGFVKLRLGVRRTP+MVA IAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120

Query: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPG 180
           QWT++LKTGS+EAKFMAVDL+TLMFT+DRGQDL ELKEFV S  ESYEIKIG+Q FRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180

Query: 181 DPPLEEVIELLQKEKNKADGTSRSENAGPLHQEL 215
           DPP+EEVIE+LQK+KNKAD T+ SE+  PLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]

BLAST of Lsi05G020470 vs. TAIR 10
Match: AT2G46000.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Mesoderm development candidate 2 (InterPro:IPR019330); Has 31 Blast hits to 31 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 204.1 bits (518), Expect = 1.1e-52
Identity = 109/191 (57.07%), Postives = 138/191 (72.25%), Query Frame = 0


Query: 7   RSSRLPVFILIVLVAGIFKDAGFNRFADGGQRRIHITDDLDDVVDDEEDESWKEWGKKKS 66
           RSS L   IL+V +       GF R A+  +RRI I+DDLDDV D+EEDESWKEWG KK+
Sbjct: 6   RSSSL---ILLVGLLLFMNFHGFVRIAEATKRRIEISDDLDDVEDNEEDESWKEWG-KKA 65

Query: 67  ASSDFDLPPADLSKMEFTEIQAEMTKRHSGPAMGFVKLRLGVRRTPDMVAEIAMQWTKVL 126
            + +FD PP D + M F +IQ EM KR  G  +GFVKLRLGV RT D+V +IAM+WTKVL
Sbjct: 66  TTPEFD-PPPDFTNMGFDQIQEEMAKRTFGTVVGFVKLRLGVPRTKDVVIDIAMKWTKVL 125

Query: 127 KTGSVEAKFMAVDLNTLMFTMDRGQDLSELKEFVLSQAESYEIKIGDQVFRRPGDPPLEE 186
           +TG +  +FMAVD +T+MF M  G+ ++EL+EFVLSQ E+YE+KIG Q FRRPGDPP E+
Sbjct: 126 RTGGIGVRFMAVDRSTVMFNMQNGKLVTELREFVLSQEEAYEVKIGKQEFRRPGDPPFED 185

Query: 187 VIELLQKEKNK 198
           V +  Q E+ K
Sbjct: 186 VFDKFQAEQRK 191

The following BLAST results are available for this feature:

BLAST of Lsi05G020470 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G020470 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZI6	5.2e-103	89.25	Mesd domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3AVD9	5.2e-103	89.25	uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=...	[more]
A0A0A0L7G1	2.2e-101	87.38	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122310 PE=3 SV=1	[more]
A0A6J1FVR6	6.2e-96	83.64	uncharacterized protein LOC111447309 OS=Cucurbita moschata OX=3662 GN=LOC1114473...	[more]
A0A6J1IAQ9	1.2e-94	82.71	uncharacterized protein LOC111473291 OS=Cucurbita maxima OX=3661 GN=LOC111473291...	[more]

BLAST of Lsi05G020470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902444.1	4.8e-103	91.59	uncharacterized protein LOC120089088 [Benincasa hispida]	[more]
XP_008438032.1	1.1e-102	89.25	PREDICTED: uncharacterized protein LOC103483266 [Cucumis melo] >KAA0048962.1 Mes...	[more]
XP_004133861.1	4.5e-101	87.38	uncharacterized protein LOC101221666 [Cucumis sativus]	[more]
KAE8650248.1	1.2e-96	88.61	hypothetical protein Csa_010335 [Cucumis sativus]	[more]
XP_023540100.1	1.3e-95	83.64	uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi05G020470 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46000.1	1.1e-52	57.07	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019330	LRP chaperone MESD	PFAM	PF10185	Mesd	coord: 70..177 e-value: 1.3E-6 score: 28.4
None	No IPR available	GENE3D	3.30.70.260		coord: 84..178 e-value: 1.6E-14 score: 55.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..214
None	No IPR available	PANTHER	PTHR36357	OS03G0148300 PROTEIN	coord: 15..210
None	No IPR available	PANTHER	PTHR36357:SF1	OS03G0148300 PROTEIN	coord: 15..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G020470.1	Lsi05G020470.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane