Lsi05G020230 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G020230
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	LIM domain-containing protein PLIM2c-like
Location	chr05: 27237030 .. 27239402 (-)
RNA-Seq Expression	Lsi05G020230
Synteny	Lsi05G020230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTGTCTCAAAAAATAAAAATAATAACCTAAAAAAATAACATAATAATAAAAATAAAAACGATGCAAAAAACCCGGGAAACGCTGTCATCCAGTTCAACGAACACAACGGCGAACCAGTCAGATAATCGAAGGCAAATGGCTTTCATCTCTTCTCTCCGCCCTCCATTTTTGTTCTCTCGAAAAGCTCGACAAATTCCTTTGATATGGTCAACCAATCCGCCCTTCTTTCCCTCATAGACAAGTCATTCTGTCCGAAATTGGAGCGGATCCAACTTGTGATTCACAGTTCTCTGCCACATCTGGATTTACACCCCAAAATCCGACATTACCTGATGTATAAATTTGGTCTTGTACTTAATCCTTCGAAGCCTTCCATCTTGTCCAGTCGCATTCGATTTTATCTGGTAGACAAGGCTTCGGACGGCTTGGGGTTTTAATTGCCCTAGTTTTTCTTGGTTTCTGGGGGTGGTTTCTTTCTCTTTTTTTGTTCTTCTCCCGAAGTTCTTGCGTCTCGGATCGAGTTGATCTTGTAAAAGAGTAATTTCTTCATAATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAGGGGAATCCTTATCACAAGCAGTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGGTTAGTTTTTCTCTATTCAGTCTCTTTTACTTATTTCAATTTCAAATCTCATCATTCGAATTTGGCGGATTTTATCCCAATTGTTTGTTTATGACAGATGAGCAGCTACTCGTGGATGGACGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAACTCTTTAAGGAATCTGGAAACTTCAGCAAGAACTTTCAAAGTAGTATTACAACATCTCTTTCCATTTCTCCCATTTTTTCGTTTGTTCCTTTTTATTTTTTTCCCTTATTTCCTGACATTCTCTCATTTCCATGGTATTGAATGACAATAGCCAAACCTTCTGAGAAGCAACATGAACTGGTATGTTGCCACTCTTTTCACTTTTCTCAGGCTAGGTCAGCTAGATTATGATTAGCAATTCTCTGTTGGATGTATGAGAGAGCAACTGCAAATGTTTGGTTGTTATTATTAGGCGCCAAATTTTCAAATTCATATCTAATGGTTATTAGGATTAAGTGACATTTTGGCAGCTTCATCCAATAATTTTTCCTCCAAATCATGGGTTTGATTTTGAATATACCATTCCTAATATTTTTGATAAAAACAAACTGGCCTGGGAATTCTTGTACCTGAATGGTAGTGATTTTGTTTCTTATTTTAGAGCTTGCTCTCGAGTCTAATGGTGATATAATATGTCATGAGAATAGGACAGCTTTGAGTTAGAACTCCTATGATATCATTTTATCCTCATTTCATATTTGGTAGTTTATGTGTTAGCAATTTCAACCTTGTGCTCTTCATGCAAATGCTGTAATTTTTGCATAGTATTACAATTTTCATAATCTTTGACAGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTCTGTAGTTCTTCACCCCCCCTATCTTGTATAATACATTGTTACTGGATTCCTCTGTTTGTTTGGGATGACTTTTTAAGTGTTTATAAAAGCGTTTTTAGTTGGAGTTTTTTTTTTTTAAAACACTTAAAATGCCATTCCAAATAGTTGATATATGGTTAGGGAAATTGAAACTGTATGTTTCTTTGTTTTTTTGTTGGTTCCTGAATAGGTCACTTTGGAGGGGGAATGCTACCACAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAGCCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCACGCCCCCGGCCGAACATTCCGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACAAGTAGTAGAGCAATCTTAAAATGCTTTTTCTGCTCTACCAGCATTTGAGAATTCTTCTTCGCTTTATTCTTCTTATAAAGAAAACAAAAATTATTTTCTGTTTGGAAAGAAAAACCATTTGTTTTTGTTCACATTCACATTGACTTCCAATTTATAATGTAATTGAAGACACTATTTATGTCAGCCAGATAAACAGATCCTTCAAACAATTGCACCATATTCTCTGGGTGAATGAGAAGCTGGAATAAAAAGAAGATCTGCTGCAATTTCAAATATCATCAAATATATCTTACAAAAATATGATTTACCTT

mRNA sequence

TTTGTCTCAAAAAATAAAAATAATAACCTAAAAAAATAACATAATAATAAAAATAAAAACGATGCAAAAAACCCGGGAAACGCTGTCATCCAGTTCAACGAACACAACGGCGAACCAGTCAGATAATCGAAGGCAAATGGCTTTCATCTCTTCTCTCCGCCCTCCATTTTTGTTCTCTCGAAAAGCTCGACAAATTCCTTTGATATGGTCAACCAATCCGCCCTTCTTTCCCTCATAGACAAGTCATTCTGTCCGAAATTGGAGCGGATCCAACTTGTGATTCACAGTTCTCTGCCACATCTGGATTTACACCCCAAAATCCGACATTACCTGATGTATAAATTTGGTCTTGTACTTAATCCTTCGAAGCCTTCCATCTTGTCCAGTCGCATTCGATTTTATCTGGTAGACAAGGCTTCGGACGGCTTGGGGTTTTAATTGCCCTAGTTTTTCTTGGTTTCTGGGGGTGGTTTCTTTCTCTTTTTTTGTTCTTCTCCCGAAGTTCTTGCGTCTCGGATCGAGTTGATCTTGTAAAAGAGTAATTTCTTCATAATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAGGGGAATCCTTATCACAAGCAGTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGACGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAACTCTTTAAGGAATCTGGAAACTTCAGCAAGAACTTTCAAAGTACCAAACCTTCTGAGAAGCAACATGAACTGAGCTTGCTCTCGAGTCTAATGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTCACTTTGGAGGGGGAATGCTACCACAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAGCCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCACGCCCCCGGCCGAACATTCCGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACAAGTAGTAGAGCAATCTTAAAATGCTTTTTCTGCTCTACCAGCATTTGAGAATTCTTCTTCGCTTTATTCTTCTTATAAAGAAAACAAAAATTATTTTCTGTTTGGAAAGAAAAACCATTTGTTTTTGTTCACATTCACATTGACTTCCAATTTATAATGTAATTGAAGACACTATTTATGTCAGCCAGATAAACAGATCCTTCAAACAATTGCACCATATTCTCTGGGTGAATGAGAAGCTGGAATAAAAAGAAGATCTGCTGCAATTTCAAATATCATCAAATATATCTTACAAAAATATGATTTACCTT

Coding sequence (CDS)

ATGGCTTTCACAGGAACGTTGGATAAATGCAAGGCTTGTGATAAGACTGTTTATGTCGTTGATTTGTTGTCCCTTGAGGGGAATCCTTATCACAAGCAGTGCTTCAAATGCAGCCACTGCAAAGGCACCCTTTCGATGAGCAGCTACTCGTGGATGGACGGTGTCCTGTTTTGCAAGACTCATTTCGAGCAACTCTTTAAGGAATCTGGAAACTTCAGCAAGAACTTTCAAAGTACCAAACCTTCTGAGAAGCAACATGAACTGAGCTTGCTCTCGAGTCTAATGACAAGGACCCCCAGCAAACTCTCCTCCATGTTCTCTGGAACTCAAGATAAATGTGCTGTTTGCACTAAAACAGTTTATCCATTAGAGAAGGTCACTTTGGAGGGGGAATGCTACCACAAGAATTGCTTTAGATGTGCTCATGGTGGATGCCATTTGACACACTCTTCTTATGCTGCTCTTGATGGAGTCTTGTACTGCAAGCACCATTTTGCTCAGCTCTTCCTGGTCAAAGGCAACTATAGCCATGTCCTTGAAGCTGCTGCAAACAAGAAAAATACCACGCCCCCGGCCGAACATTCCGAAGAAGATGCCGAGCCTCAGCCTCAATCCGAGGAACAAGTAGTAGAGCAATCTTAA

Protein sequence

MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKTHFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTVYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLEAAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS

Homology

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BLAST of Lsi05G020230 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78
Identity = 142/215 (66.05%), Postives = 167/215 (77.67%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK CF+C+HCKGTL MS+YS MDGVL+CKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ  K  + +         +TRTPSK+SS+F GTQDKCA C KTV
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKPE---------LTRTPSKISSIFCGTQDKCAACEKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEK+ +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLF+ KGNY+HVL+
Sbjct: 121 YPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQ 180

Query: 181 AAANKK----NTTPPAEHSEEDAEPQPQSEEQVVE 212
           AA +++    NT PP     ED   + + E  V E
Sbjct: 181 AANHRRTASGNTLPP--EPTEDVAVEAKEENGVSE 204

[Close]

BLAST of Lsi05G020230 vs. ExPASy Swiss-Prot
Match: Q500W4 (LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C PE=1 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 3.3e-78
Identity = 141/207 (68.12%), Postives = 166/207 (80.19%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKTH 61
           AFTGT DKCKACDKTVYV+DL++LEG PYHK CF+CSHC GTL + +YS MDGVL+CKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTVY 121
           FEQLFKESGNFSKNFQ+   +EK ++        T+ P++LSS FSGTQDKCA C KTVY
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND-------ATKAPNRLSSFFSGTQDKCAACKKTVY 122

Query: 122 PLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLEA 181
           PLEK+T+EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLFL KGNY+HVL+A
Sbjct: 123 PLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQA 182

Query: 182 AANKKNTTPPAEHSE-EDAEPQPQSEE 208
           AAN + +T   + +E ++ E  P  EE
Sbjct: 183 AANHRRSTAEEDKTEPKEDEANPTEEE 202

[Close]

BLAST of Lsi05G020230 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 4.7e-77
Identity = 142/214 (66.36%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK CF+C+HCKGTL +S+YS MDGVL+CK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGN+SKNFQ+ K  +    L       TRTPSKLSS FSGTQDKCA C KTV
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHL-------TRTPSKLSSFFSGTQDKCATCKKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVT+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLFL KG+Y+HV +
Sbjct: 121 YPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQ 180

Query: 181 AAANKKNT------TPPA-EHSEEDAEPQPQSEE 208
           AAAN + +      +PP+ +H  +D    P+++E
Sbjct: 181 AAANHRRSASSGGASPPSDDHKPDDTASIPEAKE 207

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BLAST of Lsi05G020230 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68
Identity = 119/189 (62.96%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KC+AC+KTVY V+LLS +G  YHK CFKCSHCK  L +S+YS M+GV++C+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQS-TKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKT 120
           HFEQLFKESG+FSKNFQS  KP   +    L      RTPS+L+ MFSGTQDKCA CTKT
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPEL-----NRTPSRLAGMFSGTQDKCATCTKT 120

Query: 121 VYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVL 180
           VYP+EKVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+Y+H++
Sbjct: 121 VYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLI 180

Query: 181 EAAANKKNT 189
           ++A+ K+ T
Sbjct: 181 KSASIKRAT 184

[Close]

BLAST of Lsi05G020230 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 2.6e-67
Identity = 115/187 (61.50%), Postives = 151/187 (80.75%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KCKAC+KTVY V+LLS +G  YHK CFKC+HCK  L +SSYS M+GVL+CK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESG+F+KNFQS   S  +    L     TRTPS+++  FSGTQ+KCA C+KTV
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPEL-----TRTPSRVAGRFSGTQEKCATCSKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YP+EKVT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+Y+H+++
Sbjct: 121 YPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIK 180

Query: 181 AAANKKN 188
           +A+ K++
Sbjct: 181 SASIKRS 182

[Close]

BLAST of Lsi05G020230 vs. ExPASy TrEMBL
Match: A0A6J1IW81 (LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC111479790 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 2.8e-104
Identity = 188/213 (88.26%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ TKPSEKQ EL       TRTPSKLS+MFSGTQDKC+VCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQ-TKPSEKQSEL-------TRTPSKLSTMFSGTQDKCSVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHKNCFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKKNTTPPA+ +EEDAE QPQSE+  VEQS
Sbjct: 181 AAANKKNTTPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Lsi05G020230 vs. ExPASy TrEMBL
Match: A0A6J1E9W7 (LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC111432043 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.7e-104
Identity = 188/213 (88.26%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ TKPSEKQ EL       TRTPSKLSSMFSGTQDKC+VCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQ-TKPSEKQSEL-------TRTPSKLSSMFSGTQDKCSVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHKNCFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKKN TPPA+ +EEDAE QPQSE+  VEQS
Sbjct: 181 AAANKKNATPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Lsi05G020230 vs. ExPASy TrEMBL
Match: A0A1S3AVG8 (LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103483289 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.7e-104
Identity = 186/213 (87.32%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ TKPSE+Q++L       TRTPSKLSSMF GTQDKC+VCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQ-TKPSERQNDL-------TRTPSKLSSMFCGTQDKCSVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKK TTPPAEH++EDAEP P+S EQ VEQS
Sbjct: 181 AAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Lsi05G020230 vs. ExPASy TrEMBL
Match: A0A0A0L6A8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.4e-102
Identity = 183/213 (85.92%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ TK S+K ++L       TRTPSKLSSMFSGTQDKC+VCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQ-TKSSDKPNDL-------TRTPSKLSSMFSGTQDKCSVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKV+LEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNY+HVLE
Sbjct: 121 YPLEKVSLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKK TTPPA+H++EDAEP P+S EQ VEQS
Sbjct: 181 AAANKKTTTPPADHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Lsi05G020230 vs. ExPASy TrEMBL
Match: A0A1S3AW36 (LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC103483293 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 9.2e-100
Identity = 179/212 (84.43%), Postives = 192/212 (90.57%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYVV+LLSLEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MSFTGTLDKCKACDKTVYVVELLSLEGNPYHKSCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ+ KPSEKQ++LS       R PSKLSSMFSGTQDKCA CTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQNAKPSEKQNDLS-------RAPSKLSSMFSGTQDKCAACTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLF++KGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFMIKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEED---AEPQPQSEEQV 210
           AAANKK TTPP E +EE+    E QPQ++E V
Sbjct: 181 AAANKKATTPPPEPAEEEEGATEAQPQADEAV 205

[Close]

BLAST of Lsi05G020230 vs. NCBI nr
Match: XP_038891725.1 (LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida])

HSP 1 Score: 407.9 bits (1047), Expect = 5.3e-110
Identity = 197/213 (92.49%), Postives = 200/213 (93.90%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQSTKPSEKQ EL       TRTPSKLSSMFSGTQDKCAVCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQSTKPSEKQSEL-------TRTPSKLSSMFSGTQDKCAVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHKNCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKK TTPPAEH EEDA+PQPQSEE  VEQS
Sbjct: 181 AAANKKTTTPPAEHGEEDADPQPQSEEHAVEQS 206

[Close]

BLAST of Lsi05G020230 vs. NCBI nr
Match: XP_038891791.1 (LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida])

HSP 1 Score: 402.1 bits (1032), Expect = 2.9e-108
Identity = 196/213 (92.02%), Postives = 199/213 (93.43%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ TKPSEKQ EL       TRTPSKLSSMFSGTQDKCAVCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQ-TKPSEKQSEL-------TRTPSKLSSMFSGTQDKCAVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHKNCFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKK TTPPAEH EEDA+PQPQSEE  VEQS
Sbjct: 181 AAANKKTTTPPAEHGEEDADPQPQSEEHAVEQS 205

[Close]

BLAST of Lsi05G020230 vs. NCBI nr
Match: XP_022980415.1 (LIM domain-containing protein PLIM2b-like [Cucurbita maxima])

HSP 1 Score: 387.9 bits (995), Expect = 5.7e-104
Identity = 188/213 (88.26%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ TKPSEKQ EL       TRTPSKLS+MFSGTQDKC+VCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQ-TKPSEKQSEL-------TRTPSKLSTMFSGTQDKCSVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHKNCFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKKNTTPPA+ +EEDAE QPQSE+  VEQS
Sbjct: 181 AAANKKNTTPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Lsi05G020230 vs. NCBI nr
Match: XP_022924601.1 (LIM domain-containing protein PLIM2c-like [Cucurbita moschata] >XP_023526639.1 LIM domain-containing protein PLIM2c-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 387.1 bits (993), Expect = 9.7e-104
Identity = 188/213 (88.26%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLLSLEG PYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGIPYHKHCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ TKPSEKQ EL       TRTPSKLSSMFSGTQDKC+VCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQ-TKPSEKQSEL-------TRTPSKLSSMFSGTQDKCSVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHKNCFRCAHGGCHLTH SYAALDGVLYCKHHF+QLF+VKGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHGSYAALDGVLYCKHHFSQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKKN TPPA+ +EEDAE QPQSE+  VEQS
Sbjct: 181 AAANKKNATPPADRAEEDAESQPQSEDHAVEQS 205

[Close]

BLAST of Lsi05G020230 vs. NCBI nr
Match: XP_008438068.1 (PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo])

HSP 1 Score: 387.1 bits (993), Expect = 9.7e-104
Identity = 186/213 (87.32%), Postives = 197/213 (92.49%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           MAFTGTLDKCKACDKTVYVVDLL+LEGNPYHK CFKCSHCKGTLSMSSYSWMDGVL+CKT
Sbjct: 1   MAFTGTLDKCKACDKTVYVVDLLTLEGNPYHKNCFKCSHCKGTLSMSSYSWMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ TKPSE+Q++L       TRTPSKLSSMF GTQDKC+VCTKTV
Sbjct: 61  HFEQLFKESGNFSKNFQ-TKPSERQNDL-------TRTPSKLSSMFCGTQDKCSVCTKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVTLEGECYHK CFRCAHGGCHLTH SYAALDGVLYCKHHFAQLF+VKGNY+HVLE
Sbjct: 121 YPLEKVTLEGECYHKKCFRCAHGGCHLTHCSYAALDGVLYCKHHFAQLFMVKGNYNHVLE 180

Query: 181 AAANKKNTTPPAEHSEEDAEPQPQSEEQVVEQS 214
           AAANKK TTPPAEH++EDAEP P+S EQ VEQS
Sbjct: 181 AAANKKTTTPPAEHTDEDAEPSPRSGEQAVEQS 205

[Close]

BLAST of Lsi05G020230 vs. TAIR 10
Match: AT1G01780.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 294.3 bits (752), Expect = 8.0e-80
Identity = 142/215 (66.05%), Postives = 167/215 (77.67%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKC  CDKTVYVVD+LS+EG PYHK CF+C+HCKGTL MS+YS MDGVL+CKT
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGNFSKNFQ  K  + +         +TRTPSK+SS+F GTQDKCA C KTV
Sbjct: 61  HFEQLFKESGNFSKNFQPGKTEKPE---------LTRTPSKISSIFCGTQDKCAACEKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEK+ +EGEC+HK CFRCAHGGC LTHSSYA+LD VLYC+HHF QLF+ KGNY+HVL+
Sbjct: 121 YPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQ 180

Query: 181 AAANKK----NTTPPAEHSEEDAEPQPQSEEQVVE 212
           AA +++    NT PP     ED   + + E  V E
Sbjct: 181 AANHRRTASGNTLPP--EPTEDVAVEAKEENGVSE 204

[Close]

BLAST of Lsi05G020230 vs. TAIR 10
Match: AT3G61230.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 292.7 bits (748), Expect = 2.3e-79
Identity = 141/207 (68.12%), Postives = 166/207 (80.19%), Query Frame = 0


Query: 2   AFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKTH 61
           AFTGT DKCKACDKTVYV+DL++LEG PYHK CF+CSHC GTL + +YS MDGVL+CKTH
Sbjct: 3   AFTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLYCKTH 62

Query: 62  FEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTVY 121
           FEQLFKESGNFSKNFQ+   +EK ++        T+ P++LSS FSGTQDKCA C KTVY
Sbjct: 63  FEQLFKESGNFSKNFQTAGKTEKSND-------ATKAPNRLSSFFSGTQDKCAACKKTVY 122

Query: 122 PLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLEA 181
           PLEK+T+EGE YHK CFRCAH GC LTHSSYAALDGVLYCK HF+QLFL KGNY+HVL+A
Sbjct: 123 PLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALDGVLYCKVHFSQLFLEKGNYNHVLQA 182

Query: 182 AANKKNTTPPAEHSE-EDAEPQPQSEE 208
           AAN + +T   + +E ++ E  P  EE
Sbjct: 183 AANHRRSTAEEDKTEPKEDEANPTEEE 202

[Close]

BLAST of Lsi05G020230 vs. TAIR 10
Match: AT2G45800.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 288.9 bits (738), Expect = 3.4e-78
Identity = 142/214 (66.36%), Postives = 168/214 (78.50%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGTLDKCKACDKTVYV+DLL+LEGN YHK CF+C+HCKGTL +S+YS MDGVL+CK 
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESGN+SKNFQ+ K  +    L       TRTPSKLSS FSGTQDKCA C KTV
Sbjct: 61  HFEQLFKESGNYSKNFQAGKTEKPNDHL-------TRTPSKLSSFFSGTQDKCATCKKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YPLEKVT+EGE YHK CFRC H GC LTHSSYA+L+GVLYCK HF QLFL KG+Y+HV +
Sbjct: 121 YPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQ 180

Query: 181 AAANKKNT------TPPA-EHSEEDAEPQPQSEE 208
           AAAN + +      +PP+ +H  +D    P+++E
Sbjct: 181 AAANHRRSASSGGASPPSDDHKPDDTASIPEAKE 207

[Close]

BLAST of Lsi05G020230 vs. TAIR 10
Match: AT2G39900.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 261.2 bits (666), Expect = 7.5e-70
Identity = 119/189 (62.96%), Postives = 153/189 (80.95%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KC+AC+KTVY V+LLS +G  YHK CFKCSHCK  L +S+YS M+GV++C+ 
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKESGNFSKNFQS-TKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKT 120
           HFEQLFKESG+FSKNFQS  KP   +    L      RTPS+L+ MFSGTQDKCA CTKT
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPEL-----NRTPSRLAGMFSGTQDKCATCTKT 120

Query: 121 VYPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVL 180
           VYP+EKVT+E +CYHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+Y+H++
Sbjct: 121 VYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLI 180

Query: 181 EAAANKKNT 189
           ++A+ K+ T
Sbjct: 181 KSASIKRAT 184

[Close]

BLAST of Lsi05G020230 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 256.5 bits (654), Expect = 1.8e-68
Identity = 115/187 (61.50%), Postives = 151/187 (80.75%), Query Frame = 0


Query: 1   MAFTGTLDKCKACDKTVYVVDLLSLEGNPYHKQCFKCSHCKGTLSMSSYSWMDGVLFCKT 60
           M+FTGT  KCKAC+KTVY V+LLS +G  YHK CFKC+HCK  L +SSYS M+GVL+CK 
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKESGNFSKNFQSTKPSEKQHELSLLSSLMTRTPSKLSSMFSGTQDKCAVCTKTV 120
           HFEQLFKESG+F+KNFQS   S  +    L     TRTPS+++  FSGTQ+KCA C+KTV
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPEL-----TRTPSRVAGRFSGTQEKCATCSKTV 120

Query: 121 YPLEKVTLEGECYHKNCFRCAHGGCHLTHSSYAALDGVLYCKHHFAQLFLVKGNYSHVLE 180
           YP+EKVT+E + YHK+CF+C+HGGC ++ S+YAAL+G+LYCKHHFAQLF  KG+Y+H+++
Sbjct: 121 YPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIK 180

Query: 181 AAANKKN 188
           +A+ K++
Sbjct: 181 SASIKRS 182

The following BLAST results are available for this feature:

BLAST of Lsi05G020230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q1ECF5	1.1e-78	66.05	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
Q500W4	3.3e-78	68.12	LIM domain-containing protein PLIM2c OS=Arabidopsis thaliana OX=3702 GN=PLIM2C P...	[more]
O80839	4.7e-77	66.36	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
O04193	1.1e-68	62.96	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q9M047	2.6e-67	61.50	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]

BLAST of Lsi05G020230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IW81	2.8e-104	88.26	LIM domain-containing protein PLIM2b-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1E9W7	4.7e-104	88.26	LIM domain-containing protein PLIM2c-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A1S3AVG8	4.7e-104	87.32	LIM domain-containing protein PLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10348328...	[more]
A0A0A0L6A8	3.4e-102	85.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122580 PE=4 SV=1	[more]
A0A1S3AW36	9.2e-100	84.43	LIM domain-containing protein PLIM2c-like OS=Cucumis melo OX=3656 GN=LOC10348329...	[more]

BLAST of Lsi05G020230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891725.1	5.3e-110	92.49	LIM domain-containing protein PLIM2b-like isoform X1 [Benincasa hispida]	[more]
XP_038891791.1	2.9e-108	92.02	LIM domain-containing protein PLIM2b-like isoform X2 [Benincasa hispida]	[more]
XP_022980415.1	5.7e-104	88.26	LIM domain-containing protein PLIM2b-like [Cucurbita maxima]	[more]
XP_022924601.1	9.7e-104	88.26	LIM domain-containing protein PLIM2c-like [Cucurbita moschata] >XP_023526639.1 L...	[more]
XP_008438068.1	9.7e-104	87.32	PREDICTED: LIM domain-containing protein PLIM2b-like [Cucumis melo]	[more]

BLAST of Lsi05G020230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G01780.1	8.0e-80	66.05	GATA type zinc finger transcription factor family protein	[more]
AT3G61230.1	2.3e-79	68.12	GATA type zinc finger transcription factor family protein	[more]
AT2G45800.1	3.4e-78	66.36	GATA type zinc finger transcription factor family protein	[more]
AT2G39900.1	7.5e-70	62.96	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.1	1.8e-68	61.50	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 2.5E-11 score: 53.7 coord: 112..164 e-value: 1.2E-12 score: 58.0
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 10..65 e-value: 6.1E-12 score: 45.6 coord: 113..168 e-value: 3.1E-10 score: 40.1
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 111..171 score: 12.2068
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.2463
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 107..177 e-value: 2.6E-18 score: 67.9
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 5..103 e-value: 4.2E-18 score: 67.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..213
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..207
None	No IPR available	PANTHER	PTHR24206:SF69	LIM DOMAIN-CONTAINING PROTEIN PLIM2C	coord: 1..207
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 105..138
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 2..35
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 139..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G020230.1	Lsi05G020230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
cellular_component	GO:0015629	actin cytoskeleton
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0046872	metal ion binding