Lsi05G020070 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G020070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	UBX domain-containing protein
Location	chr05: 27122849 .. 27129854 (-)
RNA-Seq Expression	Lsi05G020070
Synteny	Lsi05G020070

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGAAACTTTACCTTTCAATCAAAACAAAGCCAAAAAGGCGCGCAATCTTGGAGTTCGTCTATACATATACATATATATACATTACATTCGTACTTATATATATATAGACATATTGTCTGCATTCTTCTTCCAGGAGTCCACCCAAAAGCCCTTCTTTCTCTCTGCCTCTGTTAATTCCCGAGACAATTCGGAGCAATGGCCCGGCCGGATCAAGAAGCGGTCGAAACCTTCATGAGAATCACCGGCGCTTCCGAGTCTCTCGCCCTGCGCAAGCTCGAGGTCCACTCTCCCTTTCTTTTTTCCCCCTCACATTCTCTTGTTCGACTTCAAAATTTTCCGATCTCCTACTTTTTTTCTTTTTTGTTATCGCGGTCTCTGTTCCTCGTAATGTACTCGGTTCTCCGATTTACTGCATTGTCCTGATTAAGCCACATTCCATCTGTAGATTGACTCCGTTATATTTTTTGTTTATAATCGGCATTTGGGTTTTGGTTCCTGCCTTGTTTGGTGATCAATCGCTTTGATTTGAGAGTCTGGGAGAGTAATGTGGTGAAATTTGAAAGCTAATGCTCGATTCAATTTTGCCCCTGAGACAATGGCTGGAATGAAAATCATTACGGCGACAATTTGGTTTTAATCGTTTTGTATGGCTGGAGTTTTAGATAGCGTAATTTTTGTTAATTTCTTACATCAATAATGTTCATTACAGAATTCGCCTTTTGTTTTACTTCCTTTGATTCATATTGAGACATCTTCTGTTTATTATATTGGGATTCTTCATCATGGTCATACGGGTTTGCGTCGATAAAATATTTTTACATGATCTATAGAATATCGATCATCTGATTTCCTATGTTAGCCCTCTTGTATGTGTCATTTTATACTCTAGACCTATACAGCATGTAACTTGAATGTGAGCTTAGAAAATTTAGCTGCCTGGACTTTTCACCTAAACTTTGTTTTTATTAGGGTTAGTGTTCTAGTAATCTAACATTATGGGCATGGGCAGGAATACAGAGGCAATGTCAATGCAGCTGTCAATTCTCATTTCAGTGAAGGGTACAGTTTCAAGTACGTAGTTTCACATTATCAAAATTTAGTATTTTTTTCAGTCCCTACCTCCTTTTATTTTTATATTGCAATATGCTGGCTTCATCTGTTTAGTTGCATACAATGCTTATGCCTTATCCTTTCTTTGTTCTGTTCTTCCTTGCTCAGTCGATTCGTTGCACCCACCTACCCAGAGCATAACTACACTAATGCAAGTGGTGGGACTCAAGGTGGACAATATGGGCTTTGGCCACTTCTTAATGCTGCCAGAAGTTTCAGGCCATCAAACCTTCTCGATCCAAATTATAGAAGACGTTTTTTTGACCAGATGCGTAGATATCCATCAATTGGCCCTCCGTCTTCTAGTTCACATTCACAACCAGGAGGTATGGGGCTTCCTTCAGAGTTCAATAGCTTTCCGGCACAACCATCTCATCAACCATGGAGAGCTAACTTTGAGGATGAAAATCACACTTCAGCATCCAGGAATCAGATAAGAGAGAGTGACACTGAGGATGAAATGCTTAGAGCTGCGATTGAGGCTTCAAAACAGGTTGAAAGATTTGATATATGCTTGCAGGCATTGCTGGACATATATGCTAGTTCTTGATTGTATGTTATATATATATTTTTGGTAACGTAATCTGTATATTCTGTTGCAGGATTCTGATATTGAGCTCTTACAAAGGCAACTTCAGCAGGAGGAGGAGGATCTTGCTCGTGCAGTTTCATTGTCGTTGAGAGTATTGTACTCCCCTTTTCTTAAAGGAAAATCGATAGTTTGATGCTTGTCCATACCTTAAAAGTTGAATTGACTTCAGATGGCCGAGCAAGAGAAAGCAGTCCGTGAGCTGATGGTAGAGAACAACGATGAAGCTACGAGCATAGGAAGAAGAGAACCTAGCAACAGTGGACCAAAGGTATTAGTCACTGTTTTTCATTTGTGCCCTTTGTGCTTTTTATGCTTCTCGCTGACTTAGATCTGTATTTCATTTCACAAAAATGATTTGTCCATTGAAATGCCTAGGAGTGCAAAGGGGACACTAGTACTCATCACCAGCATCGACGAGGAGATCTTTATCCTAAAGAGGTAGTATGGTACATGTTTATCTTTTGATTTGTTATGCATATATATATTTGATTGGCAAGCACACTCATGAACAAATATTGATGACAATGACTTTGTACTTCATATTATGAGAATATGTTAGGACGTCCAACTTCCCTCTGGCACTCTTGATGAGGGAAGAAGTAACACGTGTTTCATTTTTATGGGAACTTGATTCATGTTCTTTTTTTCCCTGAACTTAAAGTGGGATGGCATCACTTCCAAGGAGTTAAGTGAATCAGTATTGCTTGAAGCTGCCCTTTTCAGGGGAGCTTCTGATGACTTCTCAGAGAACTCTCTGCGAGCATCTCATTTGCAAAATCATAAAATTCCAGGCACAAGTAAGGGCAGTGATCTGCAACCTGTGCCGTGTCTTTCAATACCATCTTCATCAACACAGCAATCACAACAGCAACAAAAGGTTTGATCCTGTTTCCCATGGTTTAAGCTCGCAATATTTTATGCTTTCTATACTGTACTGCGACATTTTATTTGATGCTTAGGAATGGTGAGTACTTAGCTGTTGACCTTATCTGTGGCTTTTAAAATGTCGCTAGTTTTTTTATGTGATCTATATCTGGACTATTTTTATTTATTGATTTTTAAATTTCATGCTCCTTCACTGAACTTCACGTTTTATTCCTATTTTTTGACTTGGAAAGTAACAACAAAATGTTAATAAAAAAGTATTCAAGTAACTTTCATGCCTGGATATTCTGTGTTACCCGCTCCACTGTTTAACGTGGATAAAATTTTGGTTAGACATTTGTTGATGTGCATTTGATGGTGCCTAATTTAGTTCACTAATAGCCTTCACAATTTATACCTGCTTTTAAGTTCATAGGTAATGGGGTATTATCCATTTGAGCACTCTAAAACGTTCATTATATTTATTAGCATGCAGATCCCTCCTTTGAAAGTTTTATGCCTTTATAGACTTCTATTCACACTATTCTTATACTGAATACCATCCTCGCCTCGTAATAATGGATCAAACTTCTCTATCTATTTGAAGATAAGTAAGTATTACCAATGAATTCTCATCCTTGGACCTTTGATTCACCATGGGTGTAACAGGACACAGTAAGAAGTTTAGCTGCTCAAGAAGCTCCATTTCCTCGAGAACCAGAAATAAATGATAAAGATTCAGTGACCCTTCTTCTTCGATTGCCAGATGGACGTCGCCATGAGCGACGCTTTCTTAAGTCTGACAAGCTTCGGGTAAACTTTCATGGATGCTCAGTAGGATTGCAAGAATTTTGTTTAGGCTAAATATGTGTTTTTGTCCCTAATGTATGATGTTTTTCAATTTACTCCCTTATGTTTGACATTCTAACAATTATGCTTGTTGGTGTATGTTTAAATTGGTTCTTGATAATCTTACATTGCATAGTAGTTTAGTCTTAGTGAGTTATATAGTTTAGAGAAGGAATTAGGTTTCACTTAAGAAGATTTTCTAATTTCTCTTTCAAATTTTTTTAAGGTAGTAGAAATTCTGACTTTTCTTCTTTTGGGTGGCTTAATCTCTCATCTAAATTTTGGCTAACTATCATGCAATGAAAACTTATAATCATCCTATTTTAACCTTCATCGACGGGAAGGGTATAGTTAAAAAAGATACTAAAATATAAAGTACTAAATCAATTTTAAACATGGACTAAATTAAAAACATTTTTTCACTCTCAACTGACTTTGGCTTTCTTGTTTTGAAGCTTCTTTTCAACTTCATTGATGACAAATTAGCTATGAAGCCTGGCACATATAAAGTGGTAAGCTAGTAATTTTCCTCCTGCCCTTGATTCCTAAACAGCTGCTAACTTGCTTGGCATAATACTGCAGCGTTTTCAAATTTCAACCATGCCCTTGTAATTTTACTGTTTGTTTTTGGCATTTTAGCTTTCAAAGCAGAACTGAATGAACACATTCACAATAACATCATGAATGATCGATCTGAGTTTCACATCTTTTTTTTTTTTGTATGAACAGGCAAGGCCATATCCGAGGTGTACTTTTGGAGTTGAAGATGGTTTGATGATGTTGAGAGATCTCGGCCTCACTGGAAAGCAAGAAGCCTTGTTTGTGGAGTTAATATAGTGTAACATTTTGCATCAACCACTTTTGAAACGAAGCGAACAATTGAATTGATGGGTGACCATGCAGACAGGTGCTCAAGCTATCTAGTTTATGTATGTGAATAGTTGAAAACTATTGGTGTGTCGGTGGCTAAAAGAAACGAGAGTTCTTTGAACAAGGGGCTGTTTGAGTATCTTAATAGATGGTTCTATTTAAAGCAATTGACTTGATTAATACTATTCAATGTCAGATCTGAAGTCCTAACAAAAGTCATTTGGTCCATGTCTCGGAAAATTTCTAGCAAAATTTCCATACTACTTCCATTCATTATTTGCCTTAAAAGAAGAATTTCAACGTTTGAGTTTTGTACTTAATACAGGTAATTATGCCACTTGTACTACCAAACATCAAAGCTGTTCTCAACAGTCTCTCTCTGACTAAATTACTAGCTCGTGGTAAAACGTTGACTTCAAGATTGCATGTGAATGTGGTGGTTTGGGATCCGTTTGTAAGCATATTACAGACTGTTTATTAGTTTGTTGAGTTTGAAATGTTGTACTGATATTTCATTATGGTACCTCAATAGTTCTTTTTAATATAATTTGTCAAATGTCAACACCAACAATTTCATCGAAATTTTATCCATCACTTCACTGTGATCCAGCCTCCGAAAGTCTCTTCACAAAAAAATGGGTGTTGAAACAAAAAAAAATGAATTTATAATCAGAGTTATTGACCCGAAAGATTAGAAAGGAAAAAGGGAACAGAACTTTGAATCAAAACATTGGGGCACTGCTAGCTCTCAGAAGATGTTTGCTTTTCTTGATTTTCTTCTTCAGGTGCAGGTGCAGTCCAATACTGCTTGGTTGCCACCAATATCTTTTCTCTCTGATGGGGTCCTTTCTCATGGTCTGCAATTCTGCATTCCCATTGCATAGCCTCTGCAATGTTCTTGACCTCCACCAACACATCCACGTCGTCTCTAAGGATCACGCTGCCCTGTGGCCGCAGAATCCTGTCCATTTCCAGCAGAATGTCCTCCATTTCACATCTGCATCACAGGTATAATTTCCTCACAAATTAGTTTTTGAGCACTTTACGAAAGAATATTGTAATGTGCATAGTCTAATTTACCTGTCCTTGTACATACTGAAGACGGAATCTCCATGAATGAAGTCATATGTTCGAGGATAAGTTGACATTGCCTCGCACCTAAGATCAATTAGCGTTTTCAATTCAAAGTGATTATAATAGGCTAAACTATGATACAAGTACTACAACATGCTTATGCTGTATTTGTCAAGTTTAGTTTGCTGCAGCAGTTAAGGATGCATTTTAGTTCTACATACCAATTTTGATATGTTCCAATAAGTCCTCGTTCGTAGATGACTCCAAGGGTGTTAAAATCCGCTTCGACAGGGACAACGTTCATGACCCACAGAGGATCATCAACAAGGGCAGCTGCAAAGCCACCCAAGAACGAGTTCATGTCGAGCAAATTGCGGTACCTCCCAGGCTCAGCAAGCTGGTTGTCCAAGGCCTTGTAATGTGCTACTCTCTTTCTCCATAACTCTGTATTTTCAGTGAAGTTTTCTGCTGTGATTTGCTTTAAACTCCTACTGCTAATTCTTGGTGGAACCGAAGTCAGTCTCTCTGGCCAATTGAGCAGCTGCCCACCAGCTGTTTCTTTTATATCAGACACGTCAGGAAGTGGAGTCAGACAAGGCTCCATTTTAGTGTACCTGCAGTTAGACAGATAAGTGTAAATACAAGGTAATAACTAATAAATATTATGACTGAAAAGATGGAAACTGTTCTCCTTGTCTTGTTCTCCAAATGAGGAATTGATTTCTGTTGATTCTTGGAAACAAAACCAAGCTTAGAATAAAGAAATAGCTGGTGAAAGAAGCAAAGAGCCCAACCCCTTGAGCATCTTTTAGATATCAAACTTTTTAATCTCTTTGGTTTTGGTATCACAGCTAAAGTGAGATCACTTGCAGACTCTGGCTTTTAGCTTTGAATATCTCTAGAAAAAAGAATCAAGGCAAAACAGTTTACAAACCATGCGGTATCGGGGTCCTGTCCCTGGCAAAAGTTGGGGAATTTGAAGACCTTGCGATTCTTTTTACAGTGAATATGGTTGGTTGGTTTTTGCCAAATTGCTATATCATCCTTCTGCTTTAACTTTTTCCAGCAAAGGCTTTTAGCCACAGCCTCGATCTTCGACTGCTCGTCTTGGAGATCACCGGTCGTTCTGTTCCAACCTTTCCAGTGATTTTCCCAGTTTATCGGTGGCCCGGAGAGAATCCAATAGCCACCAGGCCTTAGAATTCTATCAACTTCGATCAAGTACATCCCATCTGCTCCACACAGAAGATGAAATAGCTTTGAATGAGAATGTATGTGGTAGTTAGTACTTGGAATGGAAGAATGAAGTATAAAAATACCAGATTGAGCCCAGGGAATGAGGCAGCGAGAGCAGTGCGCCATGTCGAAGGCTCGAGACGGATAGGGAAGTCTAATGGAAGCAAGAACTCCGATCAAAGCGGGAACTCCGCGCTCGAGTGCAAATTGAACTTGTGCTTCATGAGTGTCTCTAGGTGCAAATGACATTGTTACTATGTTCCTTGACAATAAGTATGCTCCCCAACTTGCCACCTTACCAAACAACAACAAATCATTGTTTCTCAATACAATACTTTCTACTTTCAATGATTTTTCAAAGGACTTAATGCAATATTACTACCATCTACAAACAGTTTAAACAAAATTATT

mRNA sequence

TGAAACTTTACCTTTCAATCAAAACAAAGCCAAAAAGGCGCGCAATCTTGGAGTTCGTCTATACATATACATATATATACATTACATTCGTACTTATATATATATAGACATATTGTCTGCATTCTTCTTCCAGGAGTCCACCCAAAAGCCCTTCTTTCTCTCTGCCTCTGTTAATTCCCGAGACAATTCGGAGCAATGGCCCGGCCGGATCAAGAAGCGGTCGAAACCTTCATGAGAATCACCGGCGCTTCCGAGTCTCTCGCCCTGCGCAAGCTCGAGGAATACAGAGGCAATGTCAATGCAGCTGTCAATTCTCATTTCAGTGAAGGGTACAGTTTCAATCGATTCGTTGCACCCACCTACCCAGAGCATAACTACACTAATGCAAGTGGTGGGACTCAAGGTGGACAATATGGGCTTTGGCCACTTCTTAATGCTGCCAGAAGTTTCAGGCCATCAAACCTTCTCGATCCAAATTATAGAAGACGTTTTTTTGACCAGATGCGTAGATATCCATCAATTGGCCCTCCGTCTTCTAGTTCACATTCACAACCAGGAGGTATGGGGCTTCCTTCAGAGTTCAATAGCTTTCCGGCACAACCATCTCATCAACCATGGAGAGCTAACTTTGAGGATGAAAATCACACTTCAGCATCCAGGAATCAGATAAGAGAGAGTGACACTGAGGATGAAATGCTTAGAGCTGCGATTGAGGCTTCAAAACAGGATTCTGATATTGAGCTCTTACAAAGGCAACTTCAGCAGGAGGAGGAGGATCTTGCTCGTGCAGTTTCATTGTCGTTGAGAATGGCCGAGCAAGAGAAAGCAGTCCGTGAGCTGATGGTAGAGAACAACGATGAAGCTACGAGCATAGGAAGAAGAGAACCTAGCAACAGTGGACCAAAGGAGTGCAAAGGGGACACTAGTACTCATCACCAGCATCGACGAGGAGATCTTTATCCTAAAGAGGTAGTATGGACGTCCAACTTCCCTCTGGCACTCTTGATGAGGGAAGAATGGGATGGCATCACTTCCAAGGAGTTAAGTGAATCAGTATTGCTTGAAGCTGCCCTTTTCAGGGGAGCTTCTGATGACTTCTCAGAGAACTCTCTGCGAGCATCTCATTTGCAAAATCATAAAATTCCAGGCACAAGTAAGGGCAGTGATCTGCAACCTGTGCCGTGTCTTTCAATACCATCTTCATCAACACAGCAATCACAACAGCAACAAAAGGACACAGTAAGAAGTTTAGCTGCTCAAGAAGCTCCATTTCCTCGAGAACCAGAAATAAATGATAAAGATTCAGTGACCCTTCTTCTTCGATTGCCAGATGGACGTCGCCATGAGCGACGCTTTCTTAAGTCTGACAAGCTTCGGGCAAGGCCATATCCGAGGTGTACTTTTGGAGTTGAAGATGGTTTGATGATGTTGAGAGATCTCGGCCTCACTGGAAAGCAAGAAGCCTTGTTTGTGGAGTTAATATAGTGTAACATTTTGCATCAACCACTTTTGAAACGAAGCGAACAATTGAATTGATGGGTGACCATGCAGACAGGTGCTCAAGCTATCTAGTTTATGTATGTGAATAGTTGAAAACTATTGGTGTGTCGGTGGCTAAAAGAAACGAGAGTTCTTTGAACAAGGGGCTGTTTGAGTATCTTAATAGATGGTTCTATTTAAAGCAATTGACTTGATTAATACTATTCAATGTCAGATCTGAAGTCCTAACAAAAGTCATTTGGTCCATGTCTCGGAAAATTTCTAGCAAAATTTCCATACTACTTCCATTCATTATTTGCCTTAAAAGAAGAATTTCAACGTTTGAGTTTTGTACTTAATACAGGTAATTATGCCACTTGTACTACCAAACATCAAAGCTGTTCTCAACAGTCTCTCTCTGACTAAATTACTAGCTCGTGGTAAAACGTTGACTTCAAGATTGCATGTGAATGTGGTGGTTTGGGATCCGTTTGTAAGCATATTACAGACTGTTTATTAGTTTGTTGAGTTTGAAATGTTGTACTGATATTTCATTATGGTACCTCAATAGTTCTTTTTAATATAATTTGTCAAATGTCAACACCAACAATTTCATCGAAATTTTATCCATCACTTCACTGTGATCCAGCCTCCGAAAGTCTCTTCACAAAAAAATGGGTGTTGAAACAAAAAAAAATGAATTTATAATCAGAGTTATTGACCCGAAAGATTAGAAAGGAAAAAGGGAACAGAACTTTGAATCAAAACATTGGGGCACTGCTAGCTCTCAGAAGATGTTTGCTTTTCTTGATTTTCTTCTTCAGGTGCAGGTGCAGTCCAATACTGCTTGGTTGCCACCAATATCTTTTCTCTCTGATGGGGTCCTTTCTCATGGTCTGCAATTCTGCATTCCCATTGCATAGCCTCTGCAATGTTCTTGACCTCCACCAACACATCCACGTCGTCTCTAAGGATCACGCTGCCCTGTGGCCGCAGAATCCTGTCCATTTCCAGCAGAATGTCCTCCATTTCACATCTGCATCACAGGGACAACGTTCATGACCCACAGAGGATCATCAACAAGGGCAGCTGCAAAGCCACCCAAGAACGAGTTCATGTCGAGCAAATTGCGGTACCTCCCAGGCTCAGCAAGCTGGTTGTCCAAGGCCTTGTAATGTGCTACTCTCTTTCTCCATAACTCTGTATTTTCAGTGAAGTTTTCTGCTGTGATTTGCTTTAAACTCCTACTGCTAATTCTTGGTGGAACCGAAGTCAGTCTCTCTGGCCAATTGAGCAGCTGCCCACCAGCTGTTTCTTTTATATCAGACACGTCAGGAAGTGGAGTCAGACAAGGCTCCATTTTAGTGTACCTGCAGTTAGACAGATAAGTGTAAATACAAGGTAATAACTAATAAATATTATGACTGAAAAGATGGAAACTGTTCTCCTTGTCTTGTTCTCCAAATGAGGAATTGATTTCTGTTGATTCTTGGAAACAAAACCAAGCTTAGAATAAAGAAATAGCTGGTGAAAGAAGCAAAGAGCCCAACCCCTTGAGCATCTTTTAGATATCAAACTTTTTAATCTCTTTGGTTTTGGTATCACAGCTAAAGTGAGATCACTTGCAGACTCTGGCTTTTAGCTTTGAATATCTCTAGAAAAAAGAATCAAGGCAAAACAGTTTACAAACCATGCGGTATCGGGGTCCTGTCCCTGGCAAAAGTTGGGGAATTTGAAGACCTTGCGATTCTTTTTACAGTGAATATGGTTGGTTGGTTTTTGCCAAATTGCTATATCATCCTTCTGCTTTAACTTTTTCCAGCAAAGGCTTTTAGCCACAGCCTCGATCTTCGACTGCTCGTCTTGGAGATCACCGGTCGTTCTGTTCCAACCTTTCCAGTGATTTTCCCAGTTTATCGGTGGCCCGGAGAGAATCCAATAGCCACCAGGCCTTAGAATTCTATCAACTTCGATCAAGTACATCCCATCTGCTCCACACAGAAGATGAAATAGCTTTGAATGAGAATGTATGTGGTAGTTAGTACTTGGAATGGAAGAATGAAGTATAAAAATACCAGATTGAGCCCAGGGAATGAGGCAGCGAGAGCAGTGCGCCATGTCGAAGGCTCGAGACGGATAGGGAAGTCTAATGGAAGCAAGAACTCCGATCAAAGCGGGAACTCCGCGCTCGAGTGCAAATTGAACTTGTGCTTCATGAGTGTCTCTAGGTGCAAATGACATTGTTACTATGTTCCTTGACAATAAGTATGCTCCCCAACTTGCCACCTTACCAAACAACAACAAATCATTGTTTCTCAATACAATACTTTCTACTTTCAATGATTTTTCAAAGGACTTAATGCAATATTACTACCATCTACAAACAGTTTAAACAAAATTATT

Coding sequence (CDS)

ATGGCCCGGCCGGATCAAGAAGCGGTCGAAACCTTCATGAGAATCACCGGCGCTTCCGAGTCTCTCGCCCTGCGCAAGCTCGAGGAATACAGAGGCAATGTCAATGCAGCTGTCAATTCTCATTTCAGTGAAGGGTACAGTTTCAATCGATTCGTTGCACCCACCTACCCAGAGCATAACTACACTAATGCAAGTGGTGGGACTCAAGGTGGACAATATGGGCTTTGGCCACTTCTTAATGCTGCCAGAAGTTTCAGGCCATCAAACCTTCTCGATCCAAATTATAGAAGACGTTTTTTTGACCAGATGCGTAGATATCCATCAATTGGCCCTCCGTCTTCTAGTTCACATTCACAACCAGGAGGTATGGGGCTTCCTTCAGAGTTCAATAGCTTTCCGGCACAACCATCTCATCAACCATGGAGAGCTAACTTTGAGGATGAAAATCACACTTCAGCATCCAGGAATCAGATAAGAGAGAGTGACACTGAGGATGAAATGCTTAGAGCTGCGATTGAGGCTTCAAAACAGGATTCTGATATTGAGCTCTTACAAAGGCAACTTCAGCAGGAGGAGGAGGATCTTGCTCGTGCAGTTTCATTGTCGTTGAGAATGGCCGAGCAAGAGAAAGCAGTCCGTGAGCTGATGGTAGAGAACAACGATGAAGCTACGAGCATAGGAAGAAGAGAACCTAGCAACAGTGGACCAAAGGAGTGCAAAGGGGACACTAGTACTCATCACCAGCATCGACGAGGAGATCTTTATCCTAAAGAGGTAGTATGGACGTCCAACTTCCCTCTGGCACTCTTGATGAGGGAAGAATGGGATGGCATCACTTCCAAGGAGTTAAGTGAATCAGTATTGCTTGAAGCTGCCCTTTTCAGGGGAGCTTCTGATGACTTCTCAGAGAACTCTCTGCGAGCATCTCATTTGCAAAATCATAAAATTCCAGGCACAAGTAAGGGCAGTGATCTGCAACCTGTGCCGTGTCTTTCAATACCATCTTCATCAACACAGCAATCACAACAGCAACAAAAGGACACAGTAAGAAGTTTAGCTGCTCAAGAAGCTCCATTTCCTCGAGAACCAGAAATAAATGATAAAGATTCAGTGACCCTTCTTCTTCGATTGCCAGATGGACGTCGCCATGAGCGACGCTTTCTTAAGTCTGACAAGCTTCGGGCAAGGCCATATCCGAGGTGTACTTTTGGAGTTGAAGATGGTTTGATGATGTTGAGAGATCTCGGCCTCACTGGAAAGCAAGAAGCCTTGTTTGTGGAGTTAATATAG

Protein sequence

MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHNYTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQPGGMGLPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDSDIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKECKGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASDDFSENSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAPFPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLRARPYPRCTFGVEDGLMMLRDLGLTGKQEALFVELI

Homology

[Close]

BLAST of Lsi05G020070 vs. ExPASy Swiss-Prot
Match: Q4V3D3 (Plant UBX domain-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=PUX9 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.7e-47
Identity = 162/517 (31.33%), Postives = 247/517 (47.78%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFS--EGYSFNRFVAPTYPE 60
           M  P ++A++++M ITGASESLA+++LEE+  N+  A+N+HF   E   ++     T  +
Sbjct: 1   MVSPTRDAIQSYMSITGASESLAIQRLEEHGNNLPEAINAHFRDVERSIYDDSSLDTRSD 60

Query: 61  HNYTNASGGTQGGQY-----------GLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYP 120
           +N    +   +G +             L  +L+AAR+FRPS LLDPNYRR    Q+    
Sbjct: 61  YNVVEDNNHVRGSETRPVNESRPVPGALPSILSAARAFRPSLLLDPNYRRNILRQLSGSA 120

Query: 121 SIGPPSSSS-----------------HSQPGGMGLPSEFNSFPAQPSHQP-WRANFEDEN 180
             G PS SS                 H++P G+G   +         H P + +      
Sbjct: 121 LSGSPSPSSHTGEVTGFPAHSTWGNDHTRPPGLGAVGD-----GYARHSPSYGSQVHGGT 180

Query: 181 HTSASRNQIRESDTEDEMLRAAIEASKQD----------------SDIELLQRQLQQEEE 240
           H  A  + +  +D E+EM+RAAIEASK+D                S +   +  + +E+E
Sbjct: 181 HRDAD-SPVHSNDAEEEMIRAAIEASKKDFQEGRLNTRYSLDNNPSSVLSPREVINREDE 240

Query: 241 DLARAVSLSLRMAEQEKAVRELMVE--------------NNDEATSIGRREPSNSGPKEC 300
           D+ARA+S+SL M E E  +R+ + E              N +E+T   R +P +S  ++ 
Sbjct: 241 DIARAISMSLEMEEHESVLRDQLAEFMPQSVEHHDPCQSNTNEST---RYQPGSSSVQDN 300

Query: 301 KGD--------TSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEA 360
           + D        +S+ H+H   DL   E     ++P      EEW GI SKEL E+++LE 
Sbjct: 301 REDMNQKQPINSSSQHRH---DLQNSE----GSYP------EEWGGIPSKELQEAIMLEK 360

Query: 361 ALFRGASDDFSENSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRS 420
           A+F G +   +E++   + L  HK                        +SQ   +  VR 
Sbjct: 361 AIFGGVA---NESASHNNQLGIHK------------------------ESQSPNQRVVRE 420

Query: 421 LAAQEAPFPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR----------------- 430
              ++A  P EP   ++D++TLL+R+PD  RH RRFLKSDKL+                 
Sbjct: 421 EPERKAALPIEPSGENEDAITLLVRMPDSSRHGRRFLKSDKLKYLFDFIDAAGLVKPGTY 468

[Close]

BLAST of Lsi05G020070 vs. ExPASy Swiss-Prot
Match: F4JPR7 (Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUX8 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.9e-33
Identity = 167/574 (29.09%), Postives = 250/574 (43.55%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYP--E 60
           MA P+QEA++TF+ ITGAS+++AL+KLEE+RG++N AVN++FSEG   +R V    P  +
Sbjct: 1   MATPNQEAIDTFISITGASDAVALQKLEEHRGDLNQAVNAYFSEG---DRNVVREAPVND 60

Query: 61  HNYTNASGGTQGGQYGLWPLLNAARSF--RPSNLLDPNYRRRFFDQ---MRRYPSIGPPS 120
            +  +        Q  L  + NAAR+    P +LLD ++ RR FD    M R P +  P 
Sbjct: 61  DDEMDIDDVIPAPQSPL-SMFNAARTIGRPPFSLLDSDFARRVFDSDPLMPRPPFVSHPR 120

Query: 121 S--------SSHSQPGGMGLPSEFNSFPAQPSH-----------------------QPWR 180
                       S P G    +       + +H                        P  
Sbjct: 121 EVRQIPIEVKDSSGPSGRSSDAPTIEDVTETAHVQGPVTTQGTVIIDEESDDDIPFAPMG 180

Query: 181 ANFEDENHTSASRNQIRE-SDTEDEMLRAAIEASKQD----SDIELLQRQLQQE-EEDLA 240
            + +D    S + N  ++ +D E+EM+RAAIEASK++    S+  L +R L  E ++D+A
Sbjct: 181 RSRQDRPAGSVANNNNQDYNDIEEEMIRAAIEASKKEAEGSSNPLLEERPLHMEDDDDIA 240

Query: 241 RAVSLSLRMAEQE--------------KAVRELMVENNDEATSIGRREPSNSGPKECKGD 300
            AV++SL+ AE+E               A      +   +  ++  R  + S P +   D
Sbjct: 241 IAVTMSLKSAEEEVLRSQGYKASTSEIGASAVTAAQGPQDTQALNGRLAAPSSPFDDDSD 300

Query: 301 -----TSTHHQHRR---GDLYPKEVVWT------------------SNFPLALLMREEWD 360
                    H+ RR   G L P     +                  S FP       EW 
Sbjct: 301 DVDEQPLVRHRPRRAASGSLAPPNADRSRSGSPEEEHASINPAERGSGFP------SEWG 360

Query: 361 GITSKELSESVLLEAALFRG-----------------------------------ASDDF 420
           GI+S+E  E+V+LEAA+F G                                     DD 
Sbjct: 361 GISSEEHDEAVMLEAAMFGGIPETGYNHLPFLPPQPRAQPRPPSPSLTAQRLIREQQDDE 420

Query: 421 SENSLRASHLQNHKIPGTSKGSDLQPVPCLSI-------PSSSTQQSQQQQKDTVRSLAA 430
              SL+A   +  K    ++   L+                   Q+  +++++  R L A
Sbjct: 421 YVASLQADRDKEMKSIRDAEARQLEEETARKAFLEEEKKKEEEAQRKLEEEQELERQLDA 480

[Close]

BLAST of Lsi05G020070 vs. ExPASy Swiss-Prot
Match: Q9C5G7 (Plant UBX domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUX13 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-32
Identity = 149/557 (26.75%), Postives = 237/557 (42.55%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           MA P QEA++TFM ITG+S ++A+RKLEEYRGN+N AVN++F+ G   N + A    +  
Sbjct: 1   MATPTQEAIDTFMTITGSSNAVAVRKLEEYRGNLNRAVNAYFTHG-DQNSYDAMDIDD-- 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQ---MRRYPSIGPPSSS-- 120
                        G+ P+L+ AR+  P  L DPN+ R  FD    M R P +  P  +  
Sbjct: 61  -------------GVTPVLSEARTTDPFPLRDPNFGRSLFDNDPVMSRPPFVSHPREARE 120

Query: 121 ------SHSQPGGMG--LPSEFNSFPAQPSHQPWRAN-------FEDENHT--------- 180
                   + P G     P+  +      +H P            +D+N +         
Sbjct: 121 IPIEVKDSNGPSGQSNDAPTIEDVTETAQAHGPAAQEAVIIDEVSDDDNQSAPTGQSRHA 180

Query: 181 ----SASRNQIRESDTEDEMLRAAIEASK-------------QDSDIELLQRQ---LQQE 240
               SA  N    +D E++++RAAIEASK             Q ++ E+L+ +       
Sbjct: 181 VPVGSAENNMQHYNDIEEQIIRAAIEASKMETGDDVTKSVTVQSAEREVLRSEGWKASSS 240

Query: 241 EEDLARAVSLSLRMAEQEK----AVRELMVENNDE-----------------------AT 300
           E + +  VS+ ++   +      A    + E++D+                       A 
Sbjct: 241 EREASEMVSIPVQQGSRASNGRFAAPSSLSEDDDDDDDDDPDYVEEEEEPLVSHRPRRAV 300

Query: 301 SIGRREPSNSGPKECKGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELS 360
           S  R   ++  P+  + + +T H    G+ +P                 EW GI+S+E  
Sbjct: 301 SGSRSSLNDDLPRSPEAEDATIHSPGAGNGFP----------------SEWGGISSEEHD 360

Query: 361 ESVLLEAALFRGAS---------------------------------DDFSENSLRASHL 420
           E+++LEAA+F G S                                 DD    SL A  +
Sbjct: 361 EAIMLEAAMFGGISESEYGVPYAHYPQRTQRPPSPSLTAQRLIREQQDDEYLASLEADRV 420

Query: 421 QNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAPFPREPEINDKDSV 430
           +        + + ++ +          ++  +++++  R L ++EA  P+EP   +++++
Sbjct: 421 KAEARRLEEEAARVEAIEEAKRKEEEARRKVEEEQELERQLVSKEASLPQEPPAGEENAI 480

[Close]

BLAST of Lsi05G020070 vs. ExPASy TrEMBL
Match: A0A5A7U110 (Plant UBX domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002180 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 3.6e-188
Identity = 357/450 (79.33%), Postives = 381/450 (84.67%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           M RPDQEA+ETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFN++VAPTYPEHN
Sbjct: 1   MVRPDQEAIETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNQYVAPTYPEHN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           +T+ASGG+QGGQYG WPLL AARSFRPSNLLDPNYRR  FDQMR YPS+G PSS+SHSQP
Sbjct: 61  FTDASGGSQGGQYGFWPLLRAARSFRPSNLLDPNYRRNLFDQMRGYPSLGLPSSNSHSQP 120

Query: 121 GGM-GLPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGM  +PSEFN+FPAQPSHQ WRANFEDENHTS+SRNQIRESD+EDEMLRAAIEASKQDS
Sbjct: 121 GGMERIPSEFNNFPAQPSHQAWRANFEDENHTSSSRNQIRESDSEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D++LLQRQLQQEEEDLA AVSLSLRMAEQEKAVREL+VEN DEATSIGR  PSNSGPKEC
Sbjct: 181 DLQLLQRQLQQEEEDLAHAVSLSLRMAEQEKAVRELIVENTDEATSIGRGGPSNSGPKEC 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           +G TSTHHQH +G  YPK                EWDGITSKELSESVLLEAA FRG SD
Sbjct: 241 EGSTSTHHQHEQGASYPK----------------EWDGITSKELSESVLLEAAFFRGVSD 300

Query: 301 DFSE-NSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAP 360
           +FSE NS  ASHLQN KI GTSK S + PVPC SIPSSSTQ  +QQQK+T+RSLAAQEAP
Sbjct: 301 NFSENNSQPASHLQNDKIQGTSKDSHMHPVPCRSIPSSSTQPPRQQQKETMRSLAAQEAP 360

Query: 361 FPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYP 420
           FP EPEINDK+SVTLLLRLPDG RHERRFLKSDKL+                   ARPYP
Sbjct: 361 FPPEPEINDKNSVTLLLRLPDGHRHERRFLKSDKLQLLFNFIDDKLAMKPGTYKVARPYP 420

Query: 421 RCTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           RCTFGVEDG MMLRDLGLTGKQEALFVELI
Sbjct: 421 RCTFGVEDGSMMLRDLGLTGKQEALFVELI 434

[Close]

BLAST of Lsi05G020070 vs. ExPASy TrEMBL
Match: A0A1S3AVM3 (plant UBX domain-containing protein 9 OS=Cucumis melo OX=3656 GN=LOC103483304 PE=4 SV=1)

HSP 1 Score: 667.5 bits (1721), Expect = 3.6e-188
Identity = 357/450 (79.33%), Postives = 381/450 (84.67%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           M RPDQEA+ETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFN++VAPTYPEHN
Sbjct: 1   MVRPDQEAIETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNQYVAPTYPEHN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           +T+ASGG+QGGQYG WPLL AARSFRPSNLLDPNYRR  FDQMR YPS+G PSS+SHSQP
Sbjct: 61  FTDASGGSQGGQYGFWPLLRAARSFRPSNLLDPNYRRNLFDQMRGYPSLGLPSSNSHSQP 120

Query: 121 GGM-GLPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGM  +PSEFN+FPAQPSHQ WRANFEDENHTS+SRNQIRESD+EDEMLRAAIEASKQDS
Sbjct: 121 GGMERIPSEFNNFPAQPSHQAWRANFEDENHTSSSRNQIRESDSEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D++LLQRQLQQEEEDLA AVSLSLRMAEQEKAVREL+VEN DEATSIGR  PSNSGPKEC
Sbjct: 181 DLQLLQRQLQQEEEDLAHAVSLSLRMAEQEKAVRELIVENTDEATSIGRGGPSNSGPKEC 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           +G TSTHHQH +G  YPK                EWDGITSKELSESVLLEAA FRG SD
Sbjct: 241 EGSTSTHHQHEQGASYPK----------------EWDGITSKELSESVLLEAAFFRGVSD 300

Query: 301 DFSE-NSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAP 360
           +FSE NS  ASHLQN KI GTSK S + PVPC SIPSSSTQ  +QQQK+T+RSLAAQEAP
Sbjct: 301 NFSENNSQPASHLQNDKIQGTSKDSHMHPVPCRSIPSSSTQPPRQQQKETMRSLAAQEAP 360

Query: 361 FPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYP 420
           FP EPEINDK+SVTLLLRLPDG RHERRFLKSDKL+                   ARPYP
Sbjct: 361 FPPEPEINDKNSVTLLLRLPDGHRHERRFLKSDKLQLLFNFIDDKLAMKPGTYKVARPYP 420

Query: 421 RCTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           RCTFGVEDG MMLRDLGLTGKQEALFVELI
Sbjct: 421 RCTFGVEDGSMMLRDLGLTGKQEALFVELI 434

[Close]

BLAST of Lsi05G020070 vs. ExPASy TrEMBL
Match: A0A5D3D1S6 (Plant UBX domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004400 PE=4 SV=1)

HSP 1 Score: 663.7 bits (1711), Expect = 5.2e-187
Identity = 356/450 (79.11%), Postives = 380/450 (84.44%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           M RPDQEA+ETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFN++VAPTYPEHN
Sbjct: 1   MVRPDQEAIETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNQYVAPTYPEHN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           +T+ASGG+QGGQYG WPLL AARSFRPSNLLDPNYRR  FDQMR YPS+G  SS+SHSQP
Sbjct: 61  FTDASGGSQGGQYGFWPLLRAARSFRPSNLLDPNYRRNLFDQMRGYPSLGLLSSNSHSQP 120

Query: 121 GGM-GLPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGM  +PSEFN+FPAQPSHQ WRANFEDENHTS+SRNQIRESD+EDEMLRAAIEASKQDS
Sbjct: 121 GGMERIPSEFNNFPAQPSHQAWRANFEDENHTSSSRNQIRESDSEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D++LLQRQLQQEEEDLA AVSLSLR+AEQEKAVRELMVEN DEATSIGRR PSNSGPKEC
Sbjct: 181 DLQLLQRQLQQEEEDLAHAVSLSLRVAEQEKAVRELMVENTDEATSIGRRGPSNSGPKEC 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           +G TSTHHQH +G  YPK                EWDGITSKELSESVLLEAA FRG SD
Sbjct: 241 EGSTSTHHQHEQGASYPK----------------EWDGITSKELSESVLLEAAFFRGVSD 300

Query: 301 DFSE-NSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAP 360
           +FSE NS  ASHLQN KI GTSK S + PVPC SIPSSSTQ  +QQQK+T+RSLAAQEAP
Sbjct: 301 NFSENNSQPASHLQNDKIQGTSKDSHMHPVPCHSIPSSSTQPPRQQQKETMRSLAAQEAP 360

Query: 361 FPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYP 420
           FP EPEINDK+SVTLLLRLPDG RHERRFLKSDKL+                   ARPYP
Sbjct: 361 FPPEPEINDKNSVTLLLRLPDGHRHERRFLKSDKLQLLFNFIDDKLAMKPGTYKVARPYP 420

Query: 421 RCTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           RCTFGVEDG MML DLGLTGKQEALFVELI
Sbjct: 421 RCTFGVEDGSMMLSDLGLTGKQEALFVELI 434

[Close]

BLAST of Lsi05G020070 vs. ExPASy TrEMBL
Match: A0A0A0L6B8 (UBX domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G123710 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 9.0e-187
Identity = 356/450 (79.11%), Postives = 379/450 (84.22%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           M RPDQEA+ETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGY+FN++VAPTYPE+N
Sbjct: 1   MVRPDQEAIETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYNFNQYVAPTYPENN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           +T+ASGG+QGGQYG WPLL AARSFRPSNLLDPNYRR  FDQMR YPS G PSS+SHSQP
Sbjct: 61  FTDASGGSQGGQYGFWPLLRAARSFRPSNLLDPNYRRNLFDQMRGYPSPGLPSSNSHSQP 120

Query: 121 GGM-GLPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGM  +PSEFNSFPAQPSHQ WR NFEDEN TS+SRNQ RESDTEDEMLRAAIEASKQDS
Sbjct: 121 GGMERIPSEFNSFPAQPSHQAWRTNFEDENPTSSSRNQTRESDTEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D++LLQRQLQQEEEDLA AVSLSLRMAEQEKA RELMVEN DEATSIGRREPSNSGPK+C
Sbjct: 181 DLQLLQRQLQQEEEDLAHAVSLSLRMAEQEKAGRELMVENKDEATSIGRREPSNSGPKDC 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           +G TSTHHQH +G  YPK                +WDGITS ELSESVLLEAA FRG SD
Sbjct: 241 EGSTSTHHQHEQGASYPK----------------QWDGITSNELSESVLLEAAFFRGVSD 300

Query: 301 DFSE-NSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAP 360
           +FSE NSL ASHLQN KI G SKGSD+QPVPC SIPSSSTQ  +QQQK+TVRSLAAQEA 
Sbjct: 301 NFSEKNSLPASHLQNDKIQGKSKGSDMQPVPCCSIPSSSTQPPRQQQKETVRSLAAQEAQ 360

Query: 361 FPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYP 420
           FP EPEINDK+SVTLLLRLPDG RHERRFLKSDKL+                   ARPYP
Sbjct: 361 FPPEPEINDKNSVTLLLRLPDGHRHERRFLKSDKLQLLFNFIDDKLAMKPGTYKVARPYP 420

Query: 421 RCTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           RCTFGVEDG MMLRDLGLTGKQEALFVELI
Sbjct: 421 RCTFGVEDGSMMLRDLGLTGKQEALFVELI 434

[Close]

BLAST of Lsi05G020070 vs. ExPASy TrEMBL
Match: A0A6J1IDY7 (plant UBX domain-containing protein 9 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111474595 PE=4 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 2.5e-173
Identity = 330/449 (73.50%), Postives = 364/449 (81.07%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           MA PDQEAVETFMRITGASESLALRKLEEYRG++NAAVN+HFSEGY FNR+VAPT PEHN
Sbjct: 1   MAWPDQEAVETFMRITGASESLALRKLEEYRGDINAAVNAHFSEGYGFNRYVAPTIPEHN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           YTNA+GG+QGGQYGL PLLNAARSFRPS+LLDPNYRR  FDQMRRYPS GPPSSSSH QP
Sbjct: 61  YTNANGGSQGGQYGLSPLLNAARSFRPSSLLDPNYRRHLFDQMRRYPSFGPPSSSSHPQP 120

Query: 121 GGMG-LPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGMG +PS FNS  AQPSHQ WR  FE ENH+S+  NQ  E DTEDEMLRAAIEASKQDS
Sbjct: 121 GGMGSVPSGFNSLLAQPSHQAWRGTFEGENHSSSFSNQKTERDTEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D ELLQRQLQ+E++DLA AVSLSLR+AEQEKAVRELM EN DEA+SIGR EPSNSGPKE 
Sbjct: 181 DAELLQRQLQREDDDLAHAVSLSLRIAEQEKAVRELMPENKDEASSIGRGEPSNSGPKES 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           KG TSTHHQH +   YP E +             +W GI SKELSE++ LEAA+F G S+
Sbjct: 241 KGGTSTHHQHDQDPFYPNESL-------------KWGGINSKELSEAIFLEAAIFGGVSE 300

Query: 301 DFSENSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAPF 360
           DFSENS+ ASHLQN KI GTSKG+DLQPVPCLSIPSSST+QSQQQQKDT R+L  QEAPF
Sbjct: 301 DFSENSVPASHLQNDKIQGTSKGTDLQPVPCLSIPSSSTEQSQQQQKDTGRNLDVQEAPF 360

Query: 361 PREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYPR 420
           P EPEI++KDSVTLLLR+PDGR H+ RFL SD+L+                    RPYPR
Sbjct: 361 PPEPEIDNKDSVTLLLRMPDGRCHQHRFLNSDRLQLLFNFIADKLAMQPGTYKVVRPYPR 420

Query: 421 CTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           C FGVEDG MMLRDLGLTGK EAL+VE+I
Sbjct: 421 CAFGVEDGSMMLRDLGLTGKHEALYVEII 436

[Close]

BLAST of Lsi05G020070 vs. NCBI nr
Match: XP_038883756.1 (plant UBX domain-containing protein 9 [Benincasa hispida])

HSP 1 Score: 692.6 bits (1786), Expect = 2.2e-195
Identity = 371/450 (82.44%), Postives = 388/450 (86.22%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           M RPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFN++VAPT PEHN
Sbjct: 1   MFRPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNQYVAPTNPEHN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           YTNASGG+QGGQYGLWPL NAARSFRPSNLLDPNYRR FFDQMRRYPS G PSS+SHS+P
Sbjct: 61  YTNASGGSQGGQYGLWPLFNAARSFRPSNLLDPNYRRNFFDQMRRYPSFGLPSSNSHSRP 120

Query: 121 GGMG-LPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGMG +PSEFNSFPAQPSHQ WRANF DEN+ S+SRNQIRESDTEDEMLRAAIEASKQDS
Sbjct: 121 GGMGPIPSEFNSFPAQPSHQAWRANFLDENYNSSSRNQIRESDTEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D+ELLQRQLQQEEEDLARAVSLSLRMAEQEKA+RELMVEN DEATSIGRREPSNSGPKEC
Sbjct: 181 DLELLQRQLQQEEEDLARAVSLSLRMAEQEKAIRELMVENKDEATSIGRREPSNSGPKEC 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           KG TSTHHQH RG  YPK                EWDGITSKELSESVLLEAALFRG SD
Sbjct: 241 KGGTSTHHQHERGAFYPK----------------EWDGITSKELSESVLLEAALFRGVSD 300

Query: 301 DFSENSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQ-EAP 360
           +FSENS+ ASHLQ  KI GTS+GSDL PVPC SIPSSSTQQS+QQQK+TVRSLAAQ  AP
Sbjct: 301 NFSENSMPASHLQKDKIQGTSEGSDLLPVPCFSIPSSSTQQSRQQQKETVRSLAAQGGAP 360

Query: 361 FPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYP 420
           FP EPEINDKDS+TLLLRLPDG RHERRFLKSDKL+                   ARPYP
Sbjct: 361 FPPEPEINDKDSMTLLLRLPDGHRHERRFLKSDKLQLLFNFIDDKLAMKPGTYKVARPYP 420

Query: 421 RCTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           RCTFGVEDG MMLRDLGLTGKQEALFVELI
Sbjct: 421 RCTFGVEDGSMMLRDLGLTGKQEALFVELI 434

[Close]

BLAST of Lsi05G020070 vs. NCBI nr
Match: XP_008438091.1 (PREDICTED: plant UBX domain-containing protein 9 [Cucumis melo] >KAA0048994.1 plant UBX domain-containing protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 667.5 bits (1721), Expect = 7.5e-188
Identity = 357/450 (79.33%), Postives = 381/450 (84.67%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           M RPDQEA+ETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFN++VAPTYPEHN
Sbjct: 1   MVRPDQEAIETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNQYVAPTYPEHN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           +T+ASGG+QGGQYG WPLL AARSFRPSNLLDPNYRR  FDQMR YPS+G PSS+SHSQP
Sbjct: 61  FTDASGGSQGGQYGFWPLLRAARSFRPSNLLDPNYRRNLFDQMRGYPSLGLPSSNSHSQP 120

Query: 121 GGM-GLPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGM  +PSEFN+FPAQPSHQ WRANFEDENHTS+SRNQIRESD+EDEMLRAAIEASKQDS
Sbjct: 121 GGMERIPSEFNNFPAQPSHQAWRANFEDENHTSSSRNQIRESDSEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D++LLQRQLQQEEEDLA AVSLSLRMAEQEKAVREL+VEN DEATSIGR  PSNSGPKEC
Sbjct: 181 DLQLLQRQLQQEEEDLAHAVSLSLRMAEQEKAVRELIVENTDEATSIGRGGPSNSGPKEC 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           +G TSTHHQH +G  YPK                EWDGITSKELSESVLLEAA FRG SD
Sbjct: 241 EGSTSTHHQHEQGASYPK----------------EWDGITSKELSESVLLEAAFFRGVSD 300

Query: 301 DFSE-NSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAP 360
           +FSE NS  ASHLQN KI GTSK S + PVPC SIPSSSTQ  +QQQK+T+RSLAAQEAP
Sbjct: 301 NFSENNSQPASHLQNDKIQGTSKDSHMHPVPCRSIPSSSTQPPRQQQKETMRSLAAQEAP 360

Query: 361 FPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYP 420
           FP EPEINDK+SVTLLLRLPDG RHERRFLKSDKL+                   ARPYP
Sbjct: 361 FPPEPEINDKNSVTLLLRLPDGHRHERRFLKSDKLQLLFNFIDDKLAMKPGTYKVARPYP 420

Query: 421 RCTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           RCTFGVEDG MMLRDLGLTGKQEALFVELI
Sbjct: 421 RCTFGVEDGSMMLRDLGLTGKQEALFVELI 434

[Close]

BLAST of Lsi05G020070 vs. NCBI nr
Match: TYK17570.1 (plant UBX domain-containing protein 9 [Cucumis melo var. makuwa])

HSP 1 Score: 663.7 bits (1711), Expect = 1.1e-186
Identity = 356/450 (79.11%), Postives = 380/450 (84.44%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           M RPDQEA+ETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFN++VAPTYPEHN
Sbjct: 1   MVRPDQEAIETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNQYVAPTYPEHN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           +T+ASGG+QGGQYG WPLL AARSFRPSNLLDPNYRR  FDQMR YPS+G  SS+SHSQP
Sbjct: 61  FTDASGGSQGGQYGFWPLLRAARSFRPSNLLDPNYRRNLFDQMRGYPSLGLLSSNSHSQP 120

Query: 121 GGM-GLPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGM  +PSEFN+FPAQPSHQ WRANFEDENHTS+SRNQIRESD+EDEMLRAAIEASKQDS
Sbjct: 121 GGMERIPSEFNNFPAQPSHQAWRANFEDENHTSSSRNQIRESDSEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D++LLQRQLQQEEEDLA AVSLSLR+AEQEKAVRELMVEN DEATSIGRR PSNSGPKEC
Sbjct: 181 DLQLLQRQLQQEEEDLAHAVSLSLRVAEQEKAVRELMVENTDEATSIGRRGPSNSGPKEC 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           +G TSTHHQH +G  YPK                EWDGITSKELSESVLLEAA FRG SD
Sbjct: 241 EGSTSTHHQHEQGASYPK----------------EWDGITSKELSESVLLEAAFFRGVSD 300

Query: 301 DFSE-NSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAP 360
           +FSE NS  ASHLQN KI GTSK S + PVPC SIPSSSTQ  +QQQK+T+RSLAAQEAP
Sbjct: 301 NFSENNSQPASHLQNDKIQGTSKDSHMHPVPCHSIPSSSTQPPRQQQKETMRSLAAQEAP 360

Query: 361 FPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYP 420
           FP EPEINDK+SVTLLLRLPDG RHERRFLKSDKL+                   ARPYP
Sbjct: 361 FPPEPEINDKNSVTLLLRLPDGHRHERRFLKSDKLQLLFNFIDDKLAMKPGTYKVARPYP 420

Query: 421 RCTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           RCTFGVEDG MML DLGLTGKQEALFVELI
Sbjct: 421 RCTFGVEDGSMMLSDLGLTGKQEALFVELI 434

[Close]

BLAST of Lsi05G020070 vs. NCBI nr
Match: XP_004133881.1 (plant UBX domain-containing protein 9 [Cucumis sativus] >KGN56549.1 hypothetical protein Csa_010232 [Cucumis sativus])

HSP 1 Score: 662.9 bits (1709), Expect = 1.8e-186
Identity = 356/450 (79.11%), Postives = 379/450 (84.22%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           M RPDQEA+ETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGY+FN++VAPTYPE+N
Sbjct: 1   MVRPDQEAIETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYNFNQYVAPTYPENN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           +T+ASGG+QGGQYG WPLL AARSFRPSNLLDPNYRR  FDQMR YPS G PSS+SHSQP
Sbjct: 61  FTDASGGSQGGQYGFWPLLRAARSFRPSNLLDPNYRRNLFDQMRGYPSPGLPSSNSHSQP 120

Query: 121 GGM-GLPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGM  +PSEFNSFPAQPSHQ WR NFEDEN TS+SRNQ RESDTEDEMLRAAIEASKQDS
Sbjct: 121 GGMERIPSEFNSFPAQPSHQAWRTNFEDENPTSSSRNQTRESDTEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D++LLQRQLQQEEEDLA AVSLSLRMAEQEKA RELMVEN DEATSIGRREPSNSGPK+C
Sbjct: 181 DLQLLQRQLQQEEEDLAHAVSLSLRMAEQEKAGRELMVENKDEATSIGRREPSNSGPKDC 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           +G TSTHHQH +G  YPK                +WDGITS ELSESVLLEAA FRG SD
Sbjct: 241 EGSTSTHHQHEQGASYPK----------------QWDGITSNELSESVLLEAAFFRGVSD 300

Query: 301 DFSE-NSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAP 360
           +FSE NSL ASHLQN KI G SKGSD+QPVPC SIPSSSTQ  +QQQK+TVRSLAAQEA 
Sbjct: 301 NFSEKNSLPASHLQNDKIQGKSKGSDMQPVPCCSIPSSSTQPPRQQQKETVRSLAAQEAQ 360

Query: 361 FPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYP 420
           FP EPEINDK+SVTLLLRLPDG RHERRFLKSDKL+                   ARPYP
Sbjct: 361 FPPEPEINDKNSVTLLLRLPDGHRHERRFLKSDKLQLLFNFIDDKLAMKPGTYKVARPYP 420

Query: 421 RCTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           RCTFGVEDG MMLRDLGLTGKQEALFVELI
Sbjct: 421 RCTFGVEDGSMMLRDLGLTGKQEALFVELI 434

[Close]

BLAST of Lsi05G020070 vs. NCBI nr
Match: XP_022975366.1 (plant UBX domain-containing protein 9 isoform X1 [Cucurbita maxima])

HSP 1 Score: 618.2 bits (1593), Expect = 5.2e-173
Identity = 330/449 (73.50%), Postives = 364/449 (81.07%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           MA PDQEAVETFMRITGASESLALRKLEEYRG++NAAVN+HFSEGY FNR+VAPT PEHN
Sbjct: 1   MAWPDQEAVETFMRITGASESLALRKLEEYRGDINAAVNAHFSEGYGFNRYVAPTIPEHN 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYPSIGPPSSSSHSQP 120
           YTNA+GG+QGGQYGL PLLNAARSFRPS+LLDPNYRR  FDQMRRYPS GPPSSSSH QP
Sbjct: 61  YTNANGGSQGGQYGLSPLLNAARSFRPSSLLDPNYRRHLFDQMRRYPSFGPPSSSSHPQP 120

Query: 121 GGMG-LPSEFNSFPAQPSHQPWRANFEDENHTSASRNQIRESDTEDEMLRAAIEASKQDS 180
           GGMG +PS FNS  AQPSHQ WR  FE ENH+S+  NQ  E DTEDEMLRAAIEASKQDS
Sbjct: 121 GGMGSVPSGFNSLLAQPSHQAWRGTFEGENHSSSFSNQKTERDTEDEMLRAAIEASKQDS 180

Query: 181 DIELLQRQLQQEEEDLARAVSLSLRMAEQEKAVRELMVENNDEATSIGRREPSNSGPKEC 240
           D ELLQRQLQ+E++DLA AVSLSLR+AEQEKAVRELM EN DEA+SIGR EPSNSGPKE 
Sbjct: 181 DAELLQRQLQREDDDLAHAVSLSLRIAEQEKAVRELMPENKDEASSIGRGEPSNSGPKES 240

Query: 241 KGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEAALFRGASD 300
           KG TSTHHQH +   YP E +             +W GI SKELSE++ LEAA+F G S+
Sbjct: 241 KGGTSTHHQHDQDPFYPNESL-------------KWGGINSKELSEAIFLEAAIFGGVSE 300

Query: 301 DFSENSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAPF 360
           DFSENS+ ASHLQN KI GTSKG+DLQPVPCLSIPSSST+QSQQQQKDT R+L  QEAPF
Sbjct: 301 DFSENSVPASHLQNDKIQGTSKGTDLQPVPCLSIPSSSTEQSQQQQKDTGRNLDVQEAPF 360

Query: 361 PREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR-------------------ARPYPR 420
           P EPEI++KDSVTLLLR+PDGR H+ RFL SD+L+                    RPYPR
Sbjct: 361 PPEPEIDNKDSVTLLLRMPDGRCHQHRFLNSDRLQLLFNFIADKLAMQPGTYKVVRPYPR 420

Query: 421 CTFGVEDGLMMLRDLGLTGKQEALFVELI 430
           C FGVEDG MMLRDLGLTGK EAL+VE+I
Sbjct: 421 CAFGVEDGSMMLRDLGLTGKHEALYVEII 436

[Close]

BLAST of Lsi05G020070 vs. TAIR 10
Match: AT4G00752.1 (UBX domain-containing protein )

HSP 1 Score: 191.0 bits (484), Expect = 1.9e-48
Identity = 162/517 (31.33%), Postives = 247/517 (47.78%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFS--EGYSFNRFVAPTYPE 60
           M  P ++A++++M ITGASESLA+++LEE+  N+  A+N+HF   E   ++     T  +
Sbjct: 1   MVSPTRDAIQSYMSITGASESLAIQRLEEHGNNLPEAINAHFRDVERSIYDDSSLDTRSD 60

Query: 61  HNYTNASGGTQGGQY-----------GLWPLLNAARSFRPSNLLDPNYRRRFFDQMRRYP 120
           +N    +   +G +             L  +L+AAR+FRPS LLDPNYRR    Q+    
Sbjct: 61  YNVVEDNNHVRGSETRPVNESRPVPGALPSILSAARAFRPSLLLDPNYRRNILRQLSGSA 120

Query: 121 SIGPPSSSS-----------------HSQPGGMGLPSEFNSFPAQPSHQP-WRANFEDEN 180
             G PS SS                 H++P G+G   +         H P + +      
Sbjct: 121 LSGSPSPSSHTGEVTGFPAHSTWGNDHTRPPGLGAVGD-----GYARHSPSYGSQVHGGT 180

Query: 181 HTSASRNQIRESDTEDEMLRAAIEASKQD----------------SDIELLQRQLQQEEE 240
           H  A  + +  +D E+EM+RAAIEASK+D                S +   +  + +E+E
Sbjct: 181 HRDAD-SPVHSNDAEEEMIRAAIEASKKDFQEGRLNTRYSLDNNPSSVLSPREVINREDE 240

Query: 241 DLARAVSLSLRMAEQEKAVRELMVE--------------NNDEATSIGRREPSNSGPKEC 300
           D+ARA+S+SL M E E  +R+ + E              N +E+T   R +P +S  ++ 
Sbjct: 241 DIARAISMSLEMEEHESVLRDQLAEFMPQSVEHHDPCQSNTNEST---RYQPGSSSVQDN 300

Query: 301 KGD--------TSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELSESVLLEA 360
           + D        +S+ H+H   DL   E     ++P      EEW GI SKEL E+++LE 
Sbjct: 301 REDMNQKQPINSSSQHRH---DLQNSE----GSYP------EEWGGIPSKELQEAIMLEK 360

Query: 361 ALFRGASDDFSENSLRASHLQNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRS 420
           A+F G +   +E++   + L  HK                        +SQ   +  VR 
Sbjct: 361 AIFGGVA---NESASHNNQLGIHK------------------------ESQSPNQRVVRE 420

Query: 421 LAAQEAPFPREPEINDKDSVTLLLRLPDGRRHERRFLKSDKLR----------------- 430
              ++A  P EP   ++D++TLL+R+PD  RH RRFLKSDKL+                 
Sbjct: 421 EPERKAALPIEPSGENEDAITLLVRMPDSSRHGRRFLKSDKLKYLFDFIDAAGLVKPGTY 468

[Close]

BLAST of Lsi05G020070 vs. TAIR 10
Match: AT4G11740.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 2.1e-34
Identity = 167/574 (29.09%), Postives = 250/574 (43.55%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYP--E 60
           MA P+QEA++TF+ ITGAS+++AL+KLEE+RG++N AVN++FSEG   +R V    P  +
Sbjct: 1   MATPNQEAIDTFISITGASDAVALQKLEEHRGDLNQAVNAYFSEG---DRNVVREAPVND 60

Query: 61  HNYTNASGGTQGGQYGLWPLLNAARSF--RPSNLLDPNYRRRFFDQ---MRRYPSIGPPS 120
            +  +        Q  L  + NAAR+    P +LLD ++ RR FD    M R P +  P 
Sbjct: 61  DDEMDIDDVIPAPQSPL-SMFNAARTIGRPPFSLLDSDFARRVFDSDPLMPRPPFVSHPR 120

Query: 121 S--------SSHSQPGGMGLPSEFNSFPAQPSH-----------------------QPWR 180
                       S P G    +       + +H                        P  
Sbjct: 121 EVRQIPIEVKDSSGPSGRSSDAPTIEDVTETAHVQGPVTTQGTVIIDEESDDDIPFAPMG 180

Query: 181 ANFEDENHTSASRNQIRE-SDTEDEMLRAAIEASKQD----SDIELLQRQLQQE-EEDLA 240
            + +D    S + N  ++ +D E+EM+RAAIEASK++    S+  L +R L  E ++D+A
Sbjct: 181 RSRQDRPAGSVANNNNQDYNDIEEEMIRAAIEASKKEAEGSSNPLLEERPLHMEDDDDIA 240

Query: 241 RAVSLSLRMAEQE--------------KAVRELMVENNDEATSIGRREPSNSGPKECKGD 300
            AV++SL+ AE+E               A      +   +  ++  R  + S P +   D
Sbjct: 241 IAVTMSLKSAEEEVLRSQGYKASTSEIGASAVTAAQGPQDTQALNGRLAAPSSPFDDDSD 300

Query: 301 -----TSTHHQHRR---GDLYPKEVVWT------------------SNFPLALLMREEWD 360
                    H+ RR   G L P     +                  S FP       EW 
Sbjct: 301 DVDEQPLVRHRPRRAASGSLAPPNADRSRSGSPEEEHASINPAERGSGFP------SEWG 360

Query: 361 GITSKELSESVLLEAALFRG-----------------------------------ASDDF 420
           GI+S+E  E+V+LEAA+F G                                     DD 
Sbjct: 361 GISSEEHDEAVMLEAAMFGGIPETGYNHLPFLPPQPRAQPRPPSPSLTAQRLIREQQDDE 420

Query: 421 SENSLRASHLQNHKIPGTSKGSDLQPVPCLSI-------PSSSTQQSQQQQKDTVRSLAA 430
              SL+A   +  K    ++   L+                   Q+  +++++  R L A
Sbjct: 421 YVASLQADRDKEMKSIRDAEARQLEEETARKAFLEEEKKKEEEAQRKLEEEQELERQLDA 480

[Close]

BLAST of Lsi05G020070 vs. TAIR 10
Match: AT4G23040.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 141.7 bits (356), Expect = 1.3e-33
Identity = 149/557 (26.75%), Postives = 237/557 (42.55%), Query Frame = 0


Query: 1   MARPDQEAVETFMRITGASESLALRKLEEYRGNVNAAVNSHFSEGYSFNRFVAPTYPEHN 60
           MA P QEA++TFM ITG+S ++A+RKLEEYRGN+N AVN++F+ G   N + A    +  
Sbjct: 1   MATPTQEAIDTFMTITGSSNAVAVRKLEEYRGNLNRAVNAYFTHG-DQNSYDAMDIDD-- 60

Query: 61  YTNASGGTQGGQYGLWPLLNAARSFRPSNLLDPNYRRRFFDQ---MRRYPSIGPPSSS-- 120
                        G+ P+L+ AR+  P  L DPN+ R  FD    M R P +  P  +  
Sbjct: 61  -------------GVTPVLSEARTTDPFPLRDPNFGRSLFDNDPVMSRPPFVSHPREARE 120

Query: 121 ------SHSQPGGMG--LPSEFNSFPAQPSHQPWRAN-------FEDENHT--------- 180
                   + P G     P+  +      +H P            +D+N +         
Sbjct: 121 IPIEVKDSNGPSGQSNDAPTIEDVTETAQAHGPAAQEAVIIDEVSDDDNQSAPTGQSRHA 180

Query: 181 ----SASRNQIRESDTEDEMLRAAIEASK-------------QDSDIELLQRQ---LQQE 240
               SA  N    +D E++++RAAIEASK             Q ++ E+L+ +       
Sbjct: 181 VPVGSAENNMQHYNDIEEQIIRAAIEASKMETGDDVTKSVTVQSAEREVLRSEGWKASSS 240

Query: 241 EEDLARAVSLSLRMAEQEK----AVRELMVENNDE-----------------------AT 300
           E + +  VS+ ++   +      A    + E++D+                       A 
Sbjct: 241 EREASEMVSIPVQQGSRASNGRFAAPSSLSEDDDDDDDDDPDYVEEEEEPLVSHRPRRAV 300

Query: 301 SIGRREPSNSGPKECKGDTSTHHQHRRGDLYPKEVVWTSNFPLALLMREEWDGITSKELS 360
           S  R   ++  P+  + + +T H    G+ +P                 EW GI+S+E  
Sbjct: 301 SGSRSSLNDDLPRSPEAEDATIHSPGAGNGFP----------------SEWGGISSEEHD 360

Query: 361 ESVLLEAALFRGAS---------------------------------DDFSENSLRASHL 420
           E+++LEAA+F G S                                 DD    SL A  +
Sbjct: 361 EAIMLEAAMFGGISESEYGVPYAHYPQRTQRPPSPSLTAQRLIREQQDDEYLASLEADRV 420

Query: 421 QNHKIPGTSKGSDLQPVPCLSIPSSSTQQSQQQQKDTVRSLAAQEAPFPREPEINDKDSV 430
           +        + + ++ +          ++  +++++  R L ++EA  P+EP   +++++
Sbjct: 421 KAEARRLEEEAARVEAIEEAKRKEEEARRKVEEEQELERQLVSKEASLPQEPPAGEENAI 480

The following BLAST results are available for this feature:

BLAST of Lsi05G020070 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4V3D3	2.7e-47	31.33	Plant UBX domain-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=PUX9 PE...	[more]
F4JPR7	2.9e-33	29.09	Plant UBX domain-containing protein 8 OS=Arabidopsis thaliana OX=3702 GN=PUX8 PE...	[more]
Q9C5G7	1.9e-32	26.75	Plant UBX domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUX13 ...	[more]

BLAST of Lsi05G020070 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U110	3.6e-188	79.33	Plant UBX domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3AVM3	3.6e-188	79.33	plant UBX domain-containing protein 9 OS=Cucumis melo OX=3656 GN=LOC103483304 PE...	[more]
A0A5D3D1S6	5.2e-187	79.11	Plant UBX domain-containing protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A0A0L6B8	9.0e-187	79.11	UBX domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G123710 PE=4 SV...	[more]
A0A6J1IDY7	2.5e-173	73.50	plant UBX domain-containing protein 9 isoform X1 OS=Cucurbita maxima OX=3661 GN=...	[more]

BLAST of Lsi05G020070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883756.1	2.2e-195	82.44	plant UBX domain-containing protein 9 [Benincasa hispida]	[more]
XP_008438091.1	7.5e-188	79.33	PREDICTED: plant UBX domain-containing protein 9 [Cucumis melo] >KAA0048994.1 pl...	[more]
TYK17570.1	1.1e-186	79.11	plant UBX domain-containing protein 9 [Cucumis melo var. makuwa]	[more]
XP_004133881.1	1.8e-186	79.11	plant UBX domain-containing protein 9 [Cucumis sativus] >KGN56549.1 hypothetical...	[more]
XP_022975366.1	5.2e-173	73.50	plant UBX domain-containing protein 9 isoform X1 [Cucurbita maxima]	[more]

BLAST of Lsi05G020070 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G00752.1	1.9e-48	31.33	UBX domain-containing protein	[more]
AT4G11740.1	2.1e-34	29.09	Ubiquitin-like superfamily protein	[more]
AT4G23040.1	1.3e-33	26.75	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 174..201
None	No IPR available	GENE3D	3.10.20.90		coord: 368..395 e-value: 1.2E-5 score: 27.2
None	No IPR available	GENE3D	1.10.8.10		coord: 1..45 e-value: 1.7E-5 score: 26.8
None	No IPR available	PFAM	PF14555	UBA_4	coord: 6..45 e-value: 1.3E-8 score: 34.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 233..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..251
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..365
None	No IPR available	PANTHER	PTHR23322:SF68	PLANT UBX DOMAIN-CONTAINING PROTEIN 9 ISOFORM X1	coord: 351..429 coord: 1..354
None	No IPR available	PANTHER	PTHR23322	FAS-ASSOCIATED PROTEIN	coord: 351..429
None	No IPR available	PANTHER	PTHR23322	FAS-ASSOCIATED PROTEIN	coord: 1..354
None	No IPR available	CDD	cd14351	UBA_Ubx1_like	coord: 6..42 e-value: 1.96979E-14 score: 64.8018
None	No IPR available	CDD	cd01767	UBX	coord: 372..427 e-value: 1.35565E-10 score: 55.3472
IPR003903	Ubiquitin interacting motif	SMART	SM00726	uim	coord: 163..182 e-value: 15.0 score: 14.5 coord: 190..209 e-value: 0.086 score: 22.0
IPR003903	Ubiquitin interacting motif	PFAM	PF02809	UIM	coord: 190..203 e-value: 0.056 score: 13.4 coord: 163..178 e-value: 0.0034 score: 17.2
IPR003903	Ubiquitin interacting motif	PROSITE	PS50330	UIM	coord: 190..209 score: 9.552739
IPR001012	UBX domain	PFAM	PF00789	UBX	coord: 367..394 e-value: 2.5E-4 score: 21.2
IPR001012	UBX domain	PROSITE	PS50033	UBX	coord: 366..394 score: 10.336788
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 357..424
IPR009060	UBA-like superfamily	SUPERFAMILY	46934	UBA-like	coord: 2..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G020070.1	Lsi05G020070.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding