Lsi05G019650 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G019650
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr05: 26781968 .. 26785667 (-)
RNA-Seq ExpressionLsi05G019650
SyntenyLsi05G019650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCAATCCGACGGATTTCTTGCAGAGCTCCATGTTAGGGATTAACATCTTCTTCTTTATCCTTTTTGCTTGAACACACTTTCCAATTTTGTGTTCAGACTTTGGATTTTCGTTCTGCGAATCTCTCTGCCGCTTAATCGAATTCGGGGAATTAGAACAACACTATTTTTTTTCTCTCGAGTTTTTTGTTGATTATGATGCGAACCAGTAACATTCTCTATCAACTTCATCCCAAACAGCCGCTGGTTAATGGAACTCCAAGGAGTTCGTATTCTTGTCACTGGAGAGGCTCAATTGATCAAACATTCAGAGTCTTAAGCTCTCCCCCCAGATGTTCTCAATTGGCTACTGTTGCCGCCATTGTTGAGGAAGTTCACAAATTAGAGAGTGAAGGAGAGATACCGAGGTTTCGATGGGTCGAGGTGGGATCTGATATTACTGAAATGCAGAAGCAGGCTGTATCTCAGCTTCCTCCTAAGATGACTAAAAGATGTAAGGCTCTAATGAAACAAATTATATGTTTTTCGCCTCAAAAGGGTAATTTATCAGATTTGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCTGATTGGCTTTCAGTTCTTAAGCATTTGAGGGTTCTGAATCATCCTCTCTACATCGAGGTATGAATTTTTTACAATCAAATATTATAAGGTCAAACAATTAAAATAGTTGCATGGACTCGGATACAGTATTTGAAAATTATATATGATTTTCAATTACGGTAGAAGTTATCAAAGTTTCTCTTTAAATCGTATGATGTAGTTGCAATTATCATCTAGATTCTTGGTTATGTATTTAAGCGGAGTACCATTTTTTCATATTCGAACAATCTTAGTTGATATGATAAAGTTCCTATTTATTAAGGTTTTTTTTTTTTTTTTTGAAAAAAGAAAAAATAGTAGTTATTTTTGTTTTTGAGTTTTGCTAAGAATTCAAATACTTTTTAACCGTTGTTAAGAAATGGTGAGAAAACAAGCCTAATTTTCAAAAATCAAATAGATATCAAATGGAGCCTAAGCAATTGGTGATATCTCATGGCTTTCTCATGGCCTAAGTTGATGAGTGTTGTTGCTCTTAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAAGCCAATACTCGAGACTACACAAAGATTATTCATCACTATGGGAAGCAAAACCGACTCGAGAATGCTGAAAAAGTTCTTTTAAGCATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACGTTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATTTTGCCAAACAAACTTTTGAAGAGCTCAAACTGCTCGAGCAACCAATGGATAGAAGATCATACGGTGCGATGATTATGGCATATGTCAGGGCTGGGATGCCTGAGGAAGGAGAAAACATTCTGAGAGAAATGGATGCAAAAGAAATTTATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCATATTCCATGGCTGGCAATGCTGAAGGAGCCCAAAGGGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGTTATGTGGTCTGCTGATCAATGCCTATCTGATGGCCGGTCAAAGCCAAAAGGCGCAAATTGCTTTTGACAATATGAGGAGGGCAGGTCTTGAACCTAGTGACAAATGCATAGCTTTGGTTTTAAGTGCATATGAAAAGGAGAACAGGCTAAACGCAGCGTTGGAACTTCTAATAGATTTAGAGAAGGATAACCTCATGATTGGGAAGGAAGCTTCAGAAATATTAGCAGCTTGGCTTAAAAGACTTGGGGTGGTAGAAGAGGTTGAACTTGTCTTGAGAGAATACACTGCGAAAGGAGCGAGCGGATAAGGTACGATCACATCCTTGCTTGCAAAAGTTCTCTTTTCCTATTGAATTGATGCATAAAAGAACACAATTTTTCTGCTTCATTTCTGTTTTAAGGGTAATGGTTGCATAATTTTCAAACCGAAAAAGCACCCCCCTCCCCCAACAACCCCAAACACACACACACACACGAGACAAGAGTTTTACAAGCCTGTTATCGAAACTTTTATGCTGATCAAAACATGATATAAGTAAGCTGAAGTTTAATTTATTATTCAGCAGGAGAAACCCTGAGATTAGCAGCCCAATGACCTGTTAGGCTCGTTTAGGGGCGCACGGAAAGAGCGAGGCACCAATGTGTTGCATCAAGGACAGTTGTTTTTGGACGATTTGTTGATCAATGCTGCCCATGGATGGAAAACTGTTGCTTCCAATTTGGGACAATTCTAATGGAGACTGCAATTTTGGCTGTGAAGCATGCTCAACGGGATCGAGAAGTAGAGAAAGATCTGATTCAGCAGGAAAAGAAGGGTAATCTGATGGAAGGTTTACAATTGAGGATAGAGTTGGCTTCTTGACCAGAGCTGGTGGCTGTGCCTGTGGATGGGGTGCAGGTCTTGGAAGCTCAGATGTTGCTAGGTACGCTTGCAAATATGAGATCTCTACTTGCAACCTCGCAGCCTAAAAAATAATGTATATCACTCAAAATTTGACATTTATATATTGATAAACAAATTATGTGTGAAACTGAAATTGAAAACTAAATAACGTATACAAGTCTGTGTTTCTCATATGAAGATGTAGATGATATATGATGATAAGTCTCGAGTGGATATTATAAAAGTAATCGAGGGCTCCGTTTGATAATCATTTAGTTTTTTAAAATTGTGCGAATTTTCATCTTTTCTGGAAACATTTGAATTTTTACAAGCTTAAACTTTCTAAAAAAAAAAATCTGGTTGTCGAATGGAGTTGGATGGAGTTATTTGTTTTTACCTGTTGTTGAAGGGCGAAGATATGAGCAACACAACCAAAAACAGGCTCTCTAACTCGAGCATGTGCCTCATAACATATAGTTATAGCTGCATCGAGCCGTTTGTGTTCAGGAATATGTAGAAGCATCTTCGACACATTGCTGGCTCCAAACACCTTGTGCACGGCTGCAAAATGAGTTGTCCCTTGTTCGGAGTCGAAGTAGGGTGCAAAGATACACTCTGGCATACACTTCCTCCGCAGAAACTTGCACGCCCCACATGGTCCACCACTGCCCTTGCCTTCTGTGCAACTCCCACCCCTGCGCCTCGAGCTCATCTCAGCCTTGCTTGCTTGCGTTCTTTCAGGAAAAGCTAAGCAAAGCTTACTGGAAGAGAAGACAGGTATATATGTGTGTATGTGTGTGGAGCTGACTTTGAGGTTTGCGGATCACAAGGTATATATAATACTTCTTTTCTCTCTTTCTCTTAGTTTGATGGGATTTGCAAATTAGAAGGACATGTAGGTTTTGGAAGATTGAAACATAGGTCCTTTTTTTTCCTCTTTTTTTTTTTGGAAATAGCATAGGTCACTTTTTGTAGTAATATTATGAAATTCCGCCACCCTGCTTGTGTTTTAAAGCTGCGTGGAGTGAAGGATACGAGGACCTCGAATAATGCTTTTTTAAGCTAATTAATGATACTTTGCAAATTCGGGAAAATATTGAAAATGGTAACCTACTTGTAAAGTAATTTGTGTTGACAACGAGATGAGTTATAGGGATCATAGGATAGGTGTTTTTGTCAATACAATTATTGTTTATTATTAATATTAATGTATTTATATATTTGTCTGATTCAATTTGAGT

mRNA sequence

CTCAATCCGACGGATTTCTTGCAGAGCTCCATGTTAGGGATTAACATCTTCTTCTTTATCCTTTTTGCTTGAACACACTTTCCAATTTTGTGTTCAGACTTTGGATTTTCGTTCTGCGAATCTCTCTGCCGCTTAATCGAATTCGGGGAATTAGAACAACACTATTTTTTTTCTCTCGAGTTTTTTGTTGATTATGATGCGAACCAGTAACATTCTCTATCAACTTCATCCCAAACAGCCGCTGGTTAATGGAACTCCAAGGAGTTCGTATTCTTGTCACTGGAGAGGCTCAATTGATCAAACATTCAGAGTCTTAAGCTCTCCCCCCAGATGTTCTCAATTGGCTACTGTTGCCGCCATTGTTGAGGAAGTTCACAAATTAGAGAGTGAAGGAGAGATACCGAGGTTTCGATGGGTCGAGGTGGGATCTGATATTACTGAAATGCAGAAGCAGGCTGTATCTCAGCTTCCTCCTAAGATGACTAAAAGATGTAAGGCTCTAATGAAACAAATTATATGTTTTTCGCCTCAAAAGGGTAATTTATCAGATTTGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCTGATTGGCTTTCAGTTCTTAAGCATTTGAGGGTTCTGAATCATCCTCTCTACATCGAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAAGCCAATACTCGAGACTACACAAAGATTATTCATCACTATGGGAAGCAAAACCGACTCGAGAATGCTGAAAAAGTTCTTTTAAGCATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACGTTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATTTTGCCAAACAAACTTTTGAAGAGCTCAAACTGCTCGAGCAACCAATGGATAGAAGATCATACGGTGCGATGATTATGGCATATGTCAGGGCTGGGATGCCTGAGGAAGGAGAAAACATTCTGAGAGAAATGGATGCAAAAGAAATTTATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCATATTCCATGGCTGGCAATGCTGAAGGAGCCCAAAGGGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGTTATGTGGTCTGCTGATCAATGCCTATCTGATGGCCGGTCAAAGCCAAAAGGCGCAAATTGCTTTTGACAATATGAGGAGGGCAGGTCTTGAACCTAGTGACAAATGCATAGCTTTGGTTTTAAGTGCATATGAAAAGGAGAACAGGCTAAACGCAGCGTTGGAACTTCTAATAGATTTAGAGAAGGATAACCTCATGATTGGGAAGGAAGCTTCAGAAATATTAGCAGCTTGGCTTAAAAGACTTGGGGTGGTAGAAGAGGTTGAACTTGTCTTGAGAGAATACACTGCGAAAGGAGCGAGCGGATAAGCAGGAGAAACCCTGAGATTAGCAGCCCAATGACCTGTTAGGCTCGTTTAGGGGCGCACGGAAAGAGCGAGGCACCAATGTGTTGCATCAAGGACAGTTGTTTTTGGACGATTTGTTGATCAATGCTGCCCATGGATGGAAAACTGTTGCTTCCAATTTGGGACAATTCTAATGGAGACTGCAATTTTGGCTGTGAAGCATGCTCAACGGGATCGAGAAGTAGAGAAAGATCTGATTCAGCAGGAAAAGAAGGGTAATCTGATGGAAGGTTTACAATTGAGGATAGAGTTGGCTTCTTGACCAGAGCTGGTGGCTGTGCCTGTGGATGGGGTGCAGGTCTTGGAAGCTCAGATGTTGCTAGGGCGAAGATATGAGCAACACAACCAAAAACAGGCTCTCTAACTCGAGCATGTGCCTCATAACATATAGTTATAGCTGCATCGAGCCGTTTGTGTTCAGGAATATGTAGAAGCATCTTCGACACATTGCTGGCTCCAAACACCTTGTGCACGGCTGCAAAATGAGTTGTCCCTTGTTCGGAGTCGAAGTAGGGTGCAAAGATACACTCTGGCATACACTTCCTCCGCAGAAACTTGCACGCCCCACATGGTCCACCACTGCCCTTGCCTTCTGTGCAACTCCCACCCCTGCGCCTCGAGCTCATCTCAGCCTTGCTTGCTTGCGTTCTTTCAGGAAAAGCTAAGCAAAGCTTACTGGAAGAGAAGACAGGTATATATGTGTGTATGTGTGTGGAGCTGACTTTGAGGTTTGCGGATCACAAGGTATATATAATACTTCTTTTCTCTCTTTCTCTTAGTTTGATGGGATTTGCAAATTAGAAGGACATGTAGGTTTTGGAAGATTGAAACATAGGTCCTTTTTTTTCCTCTTTTTTTTTTTGGAAATAGCATAGGTCACTTTTTGTAGTAATATTATGAAATTCCGCCACCCTGCTTGTGTTTTAAAGCTGCGTGGAGTGAAGGATACGAGGACCTCGAATAATGCTTTTTTAAGCTAATTAATGATACTTTGCAAATTCGGGAAAATATTGAAAATGGTAACCTACTTGTAAAGTAATTTGTGTTGACAACGAGATGAGTTATAGGGATCATAGGATAGGTGTTTTTGTCAATACAATTATTGTTTATTATTAATATTAATGTATTTATATATTTGTCTGATTCAATTTGAGT

Coding sequence (CDS)

ATGATGCGAACCAGTAACATTCTCTATCAACTTCATCCCAAACAGCCGCTGGTTAATGGAACTCCAAGGAGTTCGTATTCTTGTCACTGGAGAGGCTCAATTGATCAAACATTCAGAGTCTTAAGCTCTCCCCCCAGATGTTCTCAATTGGCTACTGTTGCCGCCATTGTTGAGGAAGTTCACAAATTAGAGAGTGAAGGAGAGATACCGAGGTTTCGATGGGTCGAGGTGGGATCTGATATTACTGAAATGCAGAAGCAGGCTGTATCTCAGCTTCCTCCTAAGATGACTAAAAGATGTAAGGCTCTAATGAAACAAATTATATGTTTTTCGCCTCAAAAGGGTAATTTATCAGATTTGTTGGCGGCTTGGGTGAGGATTATGAAGCCTGAAAGAGCTGATTGGCTTTCAGTTCTTAAGCATTTGAGGGTTCTGAATCATCCTCTCTACATCGAGGTGGCAGAAGCTGCTCTTGTAGAGATAACATTTGAAGCCAATACTCGAGACTACACAAAGATTATTCATCACTATGGGAAGCAAAACCGACTCGAGAATGCTGAAAAAGTTCTTTTAAGCATGAGAGAAAGGGGTTTTGCTTGTGATCAGATAACGTTAACCACAATGATCCACATATATAGCAAGGCTGACAAACTTAATTTTGCCAAACAAACTTTTGAAGAGCTCAAACTGCTCGAGCAACCAATGGATAGAAGATCATACGGTGCGATGATTATGGCATATGTCAGGGCTGGGATGCCTGAGGAAGGAGAAAACATTCTGAGAGAAATGGATGCAAAAGAAATTTATGCAGGAAGTGAAGTTTACAAGGCTTTGTTAAGAGCATATTCCATGGCTGGCAATGCTGAAGGAGCCCAAAGGGTATTCGATGCAATTCAATTGGCTGCTATTCCTCCTGATGAAAAGTTATGTGGTCTGCTGATCAATGCCTATCTGATGGCCGGTCAAAGCCAAAAGGCGCAAATTGCTTTTGACAATATGAGGAGGGCAGGTCTTGAACCTAGTGACAAATGCATAGCTTTGGTTTTAAGTGCATATGAAAAGGAGAACAGGCTAAACGCAGCGTTGGAACTTCTAATAGATTTAGAGAAGGATAACCTCATGATTGGGAAGGAAGCTTCAGAAATATTAGCAGCTTGGCTTAAAAGACTTGGGGTGGTAGAAGAGGTTGAACTTGTCTTGAGAGAATACACTGCGAAAGGAGCGAGCGGATAA

Protein sequence

MMRTSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG
Homology
BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match: Q9LPC4 (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX=3702 GN=At1g01970 PE=2 SV=1)

HSP 1 Score: 451.1 bits (1159), Expect = 1.4e-125
Identity = 217/359 (60.45%), Postives = 292/359 (81.34%), Query Frame = 0

Query: 47  CSQLATVAAIVEEVHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQ 106
           CS     +  + EV + E   +   F W +VG ++TE Q +A++++P KM+KRC+ALM+Q
Sbjct: 45  CSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQ 104

Query: 107 IICFSPQKGNLSDLLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEAN 166
           IICFSP+KG+  DLL AW+R M P RADWLS+LK L+ L+ P YI+VAE +L++ +FEAN
Sbjct: 105 IICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEAN 164

Query: 167 TRDYTKIIHHYGKQNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFE 226
            RDYTKIIH+YGK N++E+AE+ LLSM+ RGF  DQ+TLT M+ +YSKA     A++TF 
Sbjct: 165 ARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFN 224

Query: 227 ELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAG 286
           E+KLL +P+D RSYG+MIMAY+RAG+PE+GE++LREMD++EI AG EVYKALLR YSM G
Sbjct: 225 EIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGG 284

Query: 287 NAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIA 346
           +AEGA+RVFDA+Q+A I PD KLCGLLINAY ++GQSQ A++AF+NMR+AG++ +DKC+A
Sbjct: 285 DAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVA 344

Query: 347 LVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTA 406
           LVL+AYEKE +LN AL  L++LEKD++M+GKEAS +LA W K+LGVVEEVEL+LRE+++
Sbjct: 345 LVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFSS 403

BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match: Q940Z1 (Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX=3702 GN=At1g19525 PE=2 SV=2)

HSP 1 Score: 164.1 bits (414), Expect = 3.4e-39
Identity = 91/216 (42.13%), Postives = 129/216 (59.72%), Query Frame = 0

Query: 193 MRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGM 252
           M + G   D +T T ++H+YSK+     A + FE LK      D + Y AMI+ YV AG 
Sbjct: 1   MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60

Query: 253 PEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP-DEKLCG 312
           P+ GE +++EM AKE+ A  EVY ALLRAY+  G+A GA  +  ++Q A+  P   +   
Sbjct: 61  PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120

Query: 313 LLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKD 372
           L + AY  AGQ  KA+  FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEKD
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180

Query: 373 NLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKG 408
            + IG     +L  W+  LG++EE E +L + +  G
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLG 216

BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match: O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 9.0e-16
Identity = 65/239 (27.20%), Postives = 112/239 (46.86%), Query Frame = 0

Query: 170 YTKIIHHYGKQNR-LENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEEL 229
           Y  I+  +GK  R       VL  MR +G   D+ T +T++   ++   L  AK+ F EL
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307

Query: 230 KLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNA 289
           K         +Y A++  + +AG+  E  ++L+EM+     A S  Y  L+ AY  AG +
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367

Query: 290 EGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALV 349
           + A  V + +    + P+      +I+AY  AG+  +A   F +M+ AG  P+      V
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427

Query: 350 LSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKG 408
           LS   K++R N  +++L D++ +     +     + A     G+ + V  V RE  + G
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486

BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match: O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.0e-15
Identity = 67/259 (25.87%), Postives = 121/259 (46.72%), Query Frame = 0

Query: 151 IEVAEAALVEI-TFEANTRDYTKIIHH---YGKQNRLENAEKVL-LSMRERGFACDQITL 210
           IE AE  LVE+     + +     +++    G   R  N E+ + +  R +   C   T 
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265

Query: 211 T--TMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREM 270
           T   MI++Y KA K   + + + E++  +   +  +Y A++ A+ R G+ E+ E I  ++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325

Query: 271 DAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQS 330
               +     VY AL+ +YS AG   GA  +F  +Q     PD     ++++AY  AG  
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385

Query: 331 QKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEIL 390
             A+  F+ M+R G+ P+ K   L+LSAY K   +     ++ ++ ++ +         +
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445

Query: 391 AAWLKRLGVVEEVELVLRE 403
                RLG   ++E +L E
Sbjct: 446 LNLYGRLGQFTKMEKILAE 464

BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 82.8 bits (203), Expect = 9.9e-15
Identity = 55/250 (22.00%), Postives = 115/250 (46.00%), Query Frame = 0

Query: 158 LVEITFEANTRDYTKIIHHYGKQNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADK 217
           ++E     N   ++ +I  + K+ +L  AEK+   M +R    D  T +++I+ +   D+
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375

Query: 218 LNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKA 277
           L+ AK  FE +   +   +  +Y  +I  + +A   EEG  + REM  + +   +  Y  
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 278 LLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAG 337
           L++    AG+ + AQ++F  +    +PPD     +L++     G+ +KA + F+ ++++ 
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495

Query: 338 LEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVE 397
           +EP      +++    K  ++    +L   L    +         + +   R G+ EE +
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555

Query: 398 LVLREYTAKG 408
            + RE    G
Sbjct: 556 ALFREMKEDG 565

BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match: A0A6J1IR15 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=3661 GN=LOC111479721 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 3.1e-197
Identity = 353/405 (87.16%), Postives = 379/405 (93.58%), Query Frame = 0

Query: 6   NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKLES 65
           NILYQ+HPKQPLVNGT RSSYSC+ RG   +  RVLS    C QLATVAAIVEEVHKLES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEEVHKLES 66

Query: 66  EGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAAWV 125
             E PRFRWVEVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICF PQ G+LSD+LAAWV
Sbjct: 67  GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSDMLAAWV 126

Query: 126 RIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLEN 185
           RIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGKQN+LE+
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKQNQLED 186

Query: 186 AEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIM 245
           AE++LLSMRERGFACDQITLTTMIHIYSKAD+LN AKQTFEELKLLE+P+DRRSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRSYDAMIM 246

Query: 246 AYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 305
           A+VRAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306

Query: 306 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 365
           D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 366 IDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
           IDLEK+ LM+GKEASE+LAAWLKRLGVVEEVELVLREY  K ASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match: A0A6J1EER0 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita moschata OX=3662 GN=LOC111431862 PE=4 SV=1)

HSP 1 Score: 691.8 bits (1784), Expect = 1.7e-195
Identity = 351/411 (85.40%), Postives = 381/411 (92.70%), Query Frame = 0

Query: 2   MRTS--NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEE 61
           M TS  NILYQ+HPKQPLVNGT RSSYSC+ RG   +  RVLS   RC QL  VAAIVEE
Sbjct: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60

Query: 62  VHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSD 121
           VHKLES  E PRFRW+EVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICFSPQ GNLSD
Sbjct: 61  VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120

Query: 122 LLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK 181
           +LAAWVRIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180

Query: 182 QNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRS 241
           +N+LE+AE++LLSMRERGFACDQITLTTMIHIYSKAD+L+ AKQTFEELKLLE+P+DRRS
Sbjct: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240

Query: 242 YGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQ 301
           Y AMIMA++RAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300

Query: 302 LAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 361
           LAAIPPD+KLCGLLINAYLMA QSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360

Query: 362 AALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
           AALELLIDLEK+ L++GKEASE+LAAWLKRLGVVEEVELVLREY  K ASG
Sbjct: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match: A0A5D3D032 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004020 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 4.0e-192
Identity = 347/406 (85.47%), Postives = 378/406 (93.10%), Query Frame = 0

Query: 4   TSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKL 63
           TSNILYQLH   PLVNGT  +S S +W+ SI     VL+S  RCSQ+ATV AIV+E+HKL
Sbjct: 5   TSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELHKL 64

Query: 64  ESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAA 123
           ESE E PRFRWVEVG +ITE QKQA+SQLPPKMTK+CKA+MKQIICFSPQKG LSD+LAA
Sbjct: 65  ESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAA 124

Query: 124 WVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRL 183
           WVRIMKPERADWLSVLKHLR+LNHPLYI+VAEAALVEITFEANTRDYTKIIHHYGKQN+L
Sbjct: 125 WVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQL 184

Query: 184 ENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAM 243
           E+AEKVLL+MRERGFACDQITLTTMIHIYSKADKL  AKQTFEELKLLEQ +D+RSYGAM
Sbjct: 185 EDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAM 244

Query: 244 IMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAI 303
           IMAYVRAG+PEEGE IL+EMDAK+IYAGSEVYKALLRAYSMAG+AEGAQRVFDAIQLAAI
Sbjct: 245 IMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAI 304

Query: 304 PPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALE 363
           PPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLNAALE
Sbjct: 305 PPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALE 364

Query: 364 LLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGAS 410
           LLIDLEKDN+M+GKEAS+ILAAWLKRLGVVEE+E+VLREYTAK  S
Sbjct: 365 LLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVS 403

BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match: A0A1S3AWA7 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN=LOC103483346 PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 6.8e-192
Identity = 346/403 (85.86%), Postives = 377/403 (93.55%), Query Frame = 0

Query: 4   TSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKL 63
           TSNILYQLH   PLVNGT  +S S +W+ SI     VL+S  RCSQ+ATV AIV+E+HKL
Sbjct: 5   TSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELHKL 64

Query: 64  ESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAA 123
           ESE E PRFRWVEVG +ITE QKQA+SQLPPKMTK+CKA+MKQIICFSPQKG LSD+LAA
Sbjct: 65  ESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAA 124

Query: 124 WVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRL 183
           WVRIMKPERADWLSVLKHLR+LNHPLYI+VAEAALVEITFEANTRDYTKIIHHYGKQN+L
Sbjct: 125 WVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQL 184

Query: 184 ENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAM 243
           E+AEKVLL+MRERGFACDQITLTTMIHIYSKADKL  AKQTFEELKLLEQ +D+RSYGAM
Sbjct: 185 EDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAM 244

Query: 244 IMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAI 303
           IMAYVRAG+PEEGE IL+EMDAK+IYAGSEVYKALLRAYSMAG+AEGAQRVFDAIQLAAI
Sbjct: 245 IMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAI 304

Query: 304 PPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALE 363
           PPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLNAALE
Sbjct: 305 PPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALE 364

Query: 364 LLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAK 407
           LLIDLEKDN+M+GKEAS+ILAAWLKRLGVVEE+E+VLREYTAK
Sbjct: 365 LLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAK 400

BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match: A0A5A7U612 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002570 PE=4 SV=1)

HSP 1 Score: 679.9 bits (1753), Expect = 6.8e-192
Identity = 346/403 (85.86%), Postives = 377/403 (93.55%), Query Frame = 0

Query: 4   TSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKL 63
           TSNILYQLH   PLVNGT  +S S +W+ SI     VL+S  RCSQ+ATV AIV+E+HKL
Sbjct: 5   TSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELHKL 64

Query: 64  ESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAA 123
           ESE E PRFRWVEVG +ITE QKQA+SQLPPKMTK+CKA+MKQIICFSPQKG LSD+LAA
Sbjct: 65  ESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAA 124

Query: 124 WVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRL 183
           WVRIMKPERADWLSVLKHLR+LNHPLYI+VAEAALVEITFEANTRDYTKIIHHYGKQN+L
Sbjct: 125 WVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQL 184

Query: 184 ENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAM 243
           E+AEKVLL+MRERGFACDQITLTTMIHIYSKADKL  AKQTFEELKLLEQ +D+RSYGAM
Sbjct: 185 EDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAM 244

Query: 244 IMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAI 303
           IMAYVRAG+PEEGE IL+EMDAK+IYAGSEVYKALLRAYSMAG+AEGAQRVFDAIQLAAI
Sbjct: 245 IMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAI 304

Query: 304 PPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALE 363
           PPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLNAALE
Sbjct: 305 PPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALE 364

Query: 364 LLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAK 407
           LLIDLEKDN+M+GKEAS+ILAAWLKRLGVVEE+E+VLREYTAK
Sbjct: 365 LLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAK 400

BLAST of Lsi05G019650 vs. NCBI nr
Match: XP_038903030.1 (pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida] >XP_038903038.1 pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida])

HSP 1 Score: 723.0 bits (1865), Expect = 1.4e-204
Identity = 365/407 (89.68%), Postives = 389/407 (95.58%), Query Frame = 0

Query: 4   TSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKL 63
           TS+I YQLHPKQPLVNGTPRSSY+ +WRGSI+QT  VLSS  RCS+LATVAAIVEEVHKL
Sbjct: 6   TSSIFYQLHPKQPLVNGTPRSSYTRYWRGSIEQTLSVLSSRRRCSRLATVAAIVEEVHKL 65

Query: 64  ESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAA 123
           E+E E PRFRWVEVGSDITE+QKQA+SQLPPKMTKRCKALMKQIICFSPQKG+LSD+L A
Sbjct: 66  ENEREKPRFRWVEVGSDITEIQKQAISQLPPKMTKRCKALMKQIICFSPQKGSLSDMLTA 125

Query: 124 WVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRL 183
           WVRIMKPERADWLSVLKHLR+ NHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK+N+L
Sbjct: 126 WVRIMKPERADWLSVLKHLRISNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKRNQL 185

Query: 184 ENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAM 243
           E+AEKVLLSMRERG ACDQITLTTMIHIYSKAD+LN AKQTFEELKLLE+ +DRRSYGAM
Sbjct: 186 EDAEKVLLSMRERGLACDQITLTTMIHIYSKADRLNLAKQTFEELKLLEKSLDRRSYGAM 245

Query: 244 IMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAI 303
           IMAYVRAGMPEEGENIL+EMDAK+IYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLA I
Sbjct: 246 IMAYVRAGMPEEGENILKEMDAKQIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAVI 305

Query: 304 PPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALE 363
           PPDEKLCGLLINAYLMAG+S+KAQIAFDNMRRAG+EPSDKCIALVLSAYE ENRLNAALE
Sbjct: 306 PPDEKLCGLLINAYLMAGESRKAQIAFDNMRRAGIEPSDKCIALVLSAYETENRLNAALE 365

Query: 364 LLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
           LLIDLEKDNL++ KEASEILAAWLKRLGVVEEVELVLREYTAK  SG
Sbjct: 366 LLIDLEKDNLVVRKEASEILAAWLKRLGVVEEVELVLREYTAKEVSG 412

BLAST of Lsi05G019650 vs. NCBI nr
Match: XP_022980308.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980309.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980310.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980311.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980312.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980313.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima])

HSP 1 Score: 697.6 bits (1799), Expect = 6.5e-197
Identity = 353/405 (87.16%), Postives = 379/405 (93.58%), Query Frame = 0

Query: 6   NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKLES 65
           NILYQ+HPKQPLVNGT RSSYSC+ RG   +  RVLS    C QLATVAAIVEEVHKLES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEEVHKLES 66

Query: 66  EGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAAWV 125
             E PRFRWVEVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICF PQ G+LSD+LAAWV
Sbjct: 67  GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSDMLAAWV 126

Query: 126 RIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLEN 185
           RIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGKQN+LE+
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKQNQLED 186

Query: 186 AEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIM 245
           AE++LLSMRERGFACDQITLTTMIHIYSKAD+LN AKQTFEELKLLE+P+DRRSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRSYDAMIM 246

Query: 246 AYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 305
           A+VRAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306

Query: 306 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 365
           D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 366 IDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
           IDLEK+ LM+GKEASE+LAAWLKRLGVVEEVELVLREY  K ASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

BLAST of Lsi05G019650 vs. NCBI nr
Match: XP_023526280.1 (pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526281.1 pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 696.8 bits (1797), Expect = 1.1e-196
Identity = 351/405 (86.67%), Postives = 380/405 (93.83%), Query Frame = 0

Query: 6   NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKLES 65
           NILYQ+HPKQPLVNGT RSSYSC+ RG   +  RVLS   RC QLATVAAIVEEVH LES
Sbjct: 7   NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLATVAAIVEEVHTLES 66

Query: 66  EGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAAWV 125
             E PRFRWVEVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICFSPQ GNLSD+LAAWV
Sbjct: 67  GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSDMLAAWV 126

Query: 126 RIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLEN 185
           RIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGK+N+LE+
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLED 186

Query: 186 AEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIM 245
           AE++LLSMRERGFACDQITLTTMIHIYSKAD+L+ AKQTFEELKLLE+P+DRRSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIM 246

Query: 246 AYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 305
           A++RAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NA+GAQRVFDAIQLAAIPP
Sbjct: 247 AFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNADGAQRVFDAIQLAAIPP 306

Query: 306 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 365
           D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366

Query: 366 IDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
           IDLEK+ LM+GKEASE+LAAWLKRLGVVEEVELVLREY  K ASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

BLAST of Lsi05G019650 vs. NCBI nr
Match: KAG6582566.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018949.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 693.0 bits (1787), Expect = 1.6e-195
Identity = 351/411 (85.40%), Postives = 381/411 (92.70%), Query Frame = 0

Query: 2   MRTS--NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEE 61
           M TS  NILYQ+HPKQPLVNGT RSSYSC+ RG   +  RVLS   RC QLA VAAIVEE
Sbjct: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLAIVAAIVEE 60

Query: 62  VHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSD 121
           VH LES  E PRFRWVEVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICFSPQ GNLSD
Sbjct: 61  VHTLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120

Query: 122 LLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK 181
           +LAAWVRIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180

Query: 182 QNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRS 241
           +N+LE+AE++LL M+ERGFACDQITLTTMIHIYSKAD+LN AKQTFE++KLLE+P+DRRS
Sbjct: 181 RNQLEDAERILLCMKERGFACDQITLTTMIHIYSKADELNLAKQTFEDIKLLEEPLDRRS 240

Query: 242 YGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQ 301
           Y AMIMA++RAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300

Query: 302 LAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 361
           LAAIPPD+KLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360

Query: 362 AALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
           AALELLIDLEK+ LM+GKEASE+LAAWLKRLGVVEEVELVLREY  K ASG
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

BLAST of Lsi05G019650 vs. NCBI nr
Match: XP_022924339.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_022924340.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_022924341.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata])

HSP 1 Score: 691.8 bits (1784), Expect = 3.6e-195
Identity = 351/411 (85.40%), Postives = 381/411 (92.70%), Query Frame = 0

Query: 2   MRTS--NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEE 61
           M TS  NILYQ+HPKQPLVNGT RSSYSC+ RG   +  RVLS   RC QL  VAAIVEE
Sbjct: 1   METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60

Query: 62  VHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSD 121
           VHKLES  E PRFRW+EVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICFSPQ GNLSD
Sbjct: 61  VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120

Query: 122 LLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK 181
           +LAAWVRIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180

Query: 182 QNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRS 241
           +N+LE+AE++LLSMRERGFACDQITLTTMIHIYSKAD+L+ AKQTFEELKLLE+P+DRRS
Sbjct: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240

Query: 242 YGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQ 301
           Y AMIMA++RAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300

Query: 302 LAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 361
           LAAIPPD+KLCGLLINAYLMA QSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360

Query: 362 AALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
           AALELLIDLEK+ L++GKEASE+LAAWLKRLGVVEEVELVLREY  K ASG
Sbjct: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411

BLAST of Lsi05G019650 vs. TAIR 10
Match: AT1G01970.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 451.1 bits (1159), Expect = 9.8e-127
Identity = 217/359 (60.45%), Postives = 292/359 (81.34%), Query Frame = 0

Query: 47  CSQLATVAAIVEEVHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQ 106
           CS     +  + EV + E   +   F W +VG ++TE Q +A++++P KM+KRC+ALM+Q
Sbjct: 45  CSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQ 104

Query: 107 IICFSPQKGNLSDLLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEAN 166
           IICFSP+KG+  DLL AW+R M P RADWLS+LK L+ L+ P YI+VAE +L++ +FEAN
Sbjct: 105 IICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEAN 164

Query: 167 TRDYTKIIHHYGKQNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFE 226
            RDYTKIIH+YGK N++E+AE+ LLSM+ RGF  DQ+TLT M+ +YSKA     A++TF 
Sbjct: 165 ARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFN 224

Query: 227 ELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAG 286
           E+KLL +P+D RSYG+MIMAY+RAG+PE+GE++LREMD++EI AG EVYKALLR YSM G
Sbjct: 225 EIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGG 284

Query: 287 NAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIA 346
           +AEGA+RVFDA+Q+A I PD KLCGLLINAY ++GQSQ A++AF+NMR+AG++ +DKC+A
Sbjct: 285 DAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVA 344

Query: 347 LVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTA 406
           LVL+AYEKE +LN AL  L++LEKD++M+GKEAS +LA W K+LGVVEEVEL+LRE+++
Sbjct: 345 LVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFSS 403

BLAST of Lsi05G019650 vs. TAIR 10
Match: AT1G19520.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 246.5 bits (628), Expect = 3.7e-65
Identity = 135/337 (40.06%), Postives = 206/337 (61.13%), Query Frame = 0

Query: 73  RWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKG-NLSDLLAAWVRIMKPE 132
           +WVE+   I E +++A  + P  +T +CK +M+++   S Q+G + S LLA W  +++P 
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKL--ESLQEGDDPSGLLAEWAELLEPN 350

Query: 133 RADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLENAEKVLL 192
           R DW++++  LR  N   Y++VAE  L E +F A+  DY+K+IH + K+N +E+ E++L 
Sbjct: 351 RVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILK 410

Query: 193 SMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAG 252
            M + G   D +T T ++H+YSK+     A + FE LK      D + Y AMI+ YV AG
Sbjct: 411 KMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAG 470

Query: 253 MPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP-DEKLC 312
            P+ GE +++EM AKE+ A  EVY ALLRAY+  G+A GA  +  ++Q A+  P   +  
Sbjct: 471 KPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAY 530

Query: 313 GLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEK 372
            L + AY  AGQ  KA+  FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEK
Sbjct: 531 SLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 590

Query: 373 DNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKG 408
           D + IG     +L  W+  LG++EE E +L + +  G
Sbjct: 591 DGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLG 625

BLAST of Lsi05G019650 vs. TAIR 10
Match: AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 86.3 bits (212), Expect = 6.4e-17
Identity = 65/239 (27.20%), Postives = 112/239 (46.86%), Query Frame = 0

Query: 170 YTKIIHHYGKQNR-LENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEEL 229
           Y  I+  +GK  R       VL  MR +G   D+ T +T++   ++   L  AK+ F EL
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307

Query: 230 KLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNA 289
           K         +Y A++  + +AG+  E  ++L+EM+     A S  Y  L+ AY  AG +
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367

Query: 290 EGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALV 349
           + A  V + +    + P+      +I+AY  AG+  +A   F +M+ AG  P+      V
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427

Query: 350 LSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKG 408
           LS   K++R N  +++L D++ +     +     + A     G+ + V  V RE  + G
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486

BLAST of Lsi05G019650 vs. TAIR 10
Match: AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-16
Identity = 67/259 (25.87%), Postives = 121/259 (46.72%), Query Frame = 0

Query: 151 IEVAEAALVEI-TFEANTRDYTKIIHH---YGKQNRLENAEKVL-LSMRERGFACDQITL 210
           IE AE  LVE+     + +     +++    G   R  N E+ + +  R +   C   T 
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265

Query: 211 T--TMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREM 270
           T   MI++Y KA K   + + + E++  +   +  +Y A++ A+ R G+ E+ E I  ++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325

Query: 271 DAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQS 330
               +     VY AL+ +YS AG   GA  +F  +Q     PD     ++++AY  AG  
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385

Query: 331 QKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEIL 390
             A+  F+ M+R G+ P+ K   L+LSAY K   +     ++ ++ ++ +         +
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445

Query: 391 AAWLKRLGVVEEVELVLRE 403
                RLG   ++E +L E
Sbjct: 446 LNLYGRLGQFTKMEKILAE 464

BLAST of Lsi05G019650 vs. TAIR 10
Match: AT2G35130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 85.1 bits (209), Expect = 1.4e-16
Identity = 67/259 (25.87%), Postives = 121/259 (46.72%), Query Frame = 0

Query: 151 IEVAEAALVEI-TFEANTRDYTKIIHH---YGKQNRLENAEKVL-LSMRERGFACDQITL 210
           IE AE  LVE+     + +     +++    G   R  N E+ + +  R +   C   T 
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287

Query: 211 T--TMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREM 270
           T   MI++Y KA K   + + + E++  +   +  +Y A++ A+ R G+ E+ E I  ++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347

Query: 271 DAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQS 330
               +     VY AL+ +YS AG   GA  +F  +Q     PD     ++++AY  AG  
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407

Query: 331 QKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEIL 390
             A+  F+ M+R G+ P+ K   L+LSAY K   +     ++ ++ ++ +         +
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467

Query: 391 AAWLKRLGVVEEVELVLRE 403
                RLG   ++E +L E
Sbjct: 468 LNLYGRLGQFTKMEKILAE 486

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9LPC41.4e-12560.45Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX... [more]
Q940Z13.4e-3942.13Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX... [more]
O646249.0e-1627.20Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... [more]
O821782.0e-1525.87Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX... [more]
Q9LQ149.9e-1522.00Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1IR153.1e-19787.16pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=366... [more]
A0A6J1EER01.7e-19585.40pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita moschata OX=3... [more]
A0A5D3D0324.0e-19285.47Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AWA76.8e-19285.86pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN... [more]
A0A5A7U6126.8e-19285.86Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
XP_038903030.11.4e-20489.68pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida] >XP_03... [more]
XP_022980308.16.5e-19787.16pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022... [more]
XP_023526280.11.1e-19686.67pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo... [more]
KAG6582566.11.6e-19585.40Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022924339.13.6e-19585.40pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_0... [more]
Match NameE-valueIdentityDescription
AT1G01970.19.8e-12760.45Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G19520.13.7e-6540.06pentatricopeptide (PPR) repeat-containing protein [more]
AT2G18940.16.4e-1727.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G35130.11.4e-1625.87Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G35130.21.4e-1625.87Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 170..211
e-value: 1.8E-7
score: 31.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 170..201
e-value: 1.0E-5
score: 23.4
coord: 239..268
e-value: 4.1E-5
score: 21.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 312..338
e-value: 0.13
score: 12.5
coord: 239..266
e-value: 5.8E-6
score: 26.2
coord: 274..297
e-value: 0.15
score: 12.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 271..305
score: 8.61564
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 166..200
score: 9.54735
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..340
score: 9.700809
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 236..270
score: 10.13926
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 151..299
e-value: 1.3E-28
score: 102.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 300..374
e-value: 8.6E-8
score: 33.9
IPR044657Pentatricopeptide repeat-containing protein NFD5-likePANTHERPTHR46862OS07G0661900 PROTEINcoord: 52..408
NoneNo IPR availablePANTHERPTHR46862:SF3OS07G0661900 PROTEINcoord: 52..408

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G019650.1Lsi05G019650.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding