Homology
BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match:
Q9LPC4 (Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX=3702 GN=At1g01970 PE=2 SV=1)
HSP 1 Score: 451.1 bits (1159), Expect = 1.4e-125
Identity = 217/359 (60.45%), Postives = 292/359 (81.34%), Query Frame = 0
Query: 47 CSQLATVAAIVEEVHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQ 106
CS + + EV + E + F W +VG ++TE Q +A++++P KM+KRC+ALM+Q
Sbjct: 45 CSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQ 104
Query: 107 IICFSPQKGNLSDLLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEAN 166
IICFSP+KG+ DLL AW+R M P RADWLS+LK L+ L+ P YI+VAE +L++ +FEAN
Sbjct: 105 IICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEAN 164
Query: 167 TRDYTKIIHHYGKQNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFE 226
RDYTKIIH+YGK N++E+AE+ LLSM+ RGF DQ+TLT M+ +YSKA A++TF
Sbjct: 165 ARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFN 224
Query: 227 ELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAG 286
E+KLL +P+D RSYG+MIMAY+RAG+PE+GE++LREMD++EI AG EVYKALLR YSM G
Sbjct: 225 EIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGG 284
Query: 287 NAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIA 346
+AEGA+RVFDA+Q+A I PD KLCGLLINAY ++GQSQ A++AF+NMR+AG++ +DKC+A
Sbjct: 285 DAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVA 344
Query: 347 LVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTA 406
LVL+AYEKE +LN AL L++LEKD++M+GKEAS +LA W K+LGVVEEVEL+LRE+++
Sbjct: 345 LVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFSS 403
BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match:
Q940Z1 (Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX=3702 GN=At1g19525 PE=2 SV=2)
HSP 1 Score: 164.1 bits (414), Expect = 3.4e-39
Identity = 91/216 (42.13%), Postives = 129/216 (59.72%), Query Frame = 0
Query: 193 MRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGM 252
M + G D +T T ++H+YSK+ A + FE LK D + Y AMI+ YV AG
Sbjct: 1 MSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAGK 60
Query: 253 PEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP-DEKLCG 312
P+ GE +++EM AKE+ A EVY ALLRAY+ G+A GA + ++Q A+ P +
Sbjct: 61 PKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAYS 120
Query: 313 LLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKD 372
L + AY AGQ KA+ FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEKD
Sbjct: 121 LFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEKD 180
Query: 373 NLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKG 408
+ IG +L W+ LG++EE E +L + + G
Sbjct: 181 GIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLG 216
BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match:
O64624 (Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g18940 PE=2 SV=1)
HSP 1 Score: 86.3 bits (212), Expect = 9.0e-16
Identity = 65/239 (27.20%), Postives = 112/239 (46.86%), Query Frame = 0
Query: 170 YTKIIHHYGKQNR-LENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEEL 229
Y I+ +GK R VL MR +G D+ T +T++ ++ L AK+ F EL
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 230 KLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNA 289
K +Y A++ + +AG+ E ++L+EM+ A S Y L+ AY AG +
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367
Query: 290 EGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALV 349
+ A V + + + P+ +I+AY AG+ +A F +M+ AG P+ V
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 350 LSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKG 408
LS K++R N +++L D++ + + + A G+ + V V RE + G
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match:
O82178 (Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX=3702 GN=At2g35130 PE=3 SV=1)
HSP 1 Score: 85.1 bits (209), Expect = 2.0e-15
Identity = 67/259 (25.87%), Postives = 121/259 (46.72%), Query Frame = 0
Query: 151 IEVAEAALVEI-TFEANTRDYTKIIHH---YGKQNRLENAEKVL-LSMRERGFACDQITL 210
IE AE LVE+ + + +++ G R N E+ + + R + C T
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 211 T--TMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREM 270
T MI++Y KA K + + + E++ + + +Y A++ A+ R G+ E+ E I ++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 271 DAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQS 330
+ VY AL+ +YS AG GA +F +Q PD ++++AY AG
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 331 QKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEIL 390
A+ F+ M+R G+ P+ K L+LSAY K + ++ ++ ++ + +
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 391 AAWLKRLGVVEEVELVLRE 403
RLG ++E +L E
Sbjct: 446 LNLYGRLGQFTKMEKILAE 464
BLAST of Lsi05G019650 vs. ExPASy Swiss-Prot
Match:
Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)
HSP 1 Score: 82.8 bits (203), Expect = 9.9e-15
Identity = 55/250 (22.00%), Postives = 115/250 (46.00%), Query Frame = 0
Query: 158 LVEITFEANTRDYTKIIHHYGKQNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADK 217
++E N ++ +I + K+ +L AEK+ M +R D T +++I+ + D+
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 218 LNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKA 277
L+ AK FE + + + +Y +I + +A EEG + REM + + + Y
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 278 LLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAG 337
L++ AG+ + AQ++F + +PPD +L++ G+ +KA + F+ ++++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 338 LEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVE 397
+EP +++ K ++ +L L + + + R G+ EE +
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 398 LVLREYTAKG 408
+ RE G
Sbjct: 556 ALFREMKEDG 565
BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match:
A0A6J1IR15 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=3661 GN=LOC111479721 PE=4 SV=1)
HSP 1 Score: 697.6 bits (1799), Expect = 3.1e-197
Identity = 353/405 (87.16%), Postives = 379/405 (93.58%), Query Frame = 0
Query: 6 NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKLES 65
NILYQ+HPKQPLVNGT RSSYSC+ RG + RVLS C QLATVAAIVEEVHKLES
Sbjct: 7 NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEEVHKLES 66
Query: 66 EGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAAWV 125
E PRFRWVEVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICF PQ G+LSD+LAAWV
Sbjct: 67 GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSDMLAAWV 126
Query: 126 RIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLEN 185
RIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGKQN+LE+
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKQNQLED 186
Query: 186 AEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIM 245
AE++LLSMRERGFACDQITLTTMIHIYSKAD+LN AKQTFEELKLLE+P+DRRSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRSYDAMIM 246
Query: 246 AYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 305
A+VRAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306
Query: 306 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 365
D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366
Query: 366 IDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
IDLEK+ LM+GKEASE+LAAWLKRLGVVEEVELVLREY K ASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411
BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match:
A0A6J1EER0 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita moschata OX=3662 GN=LOC111431862 PE=4 SV=1)
HSP 1 Score: 691.8 bits (1784), Expect = 1.7e-195
Identity = 351/411 (85.40%), Postives = 381/411 (92.70%), Query Frame = 0
Query: 2 MRTS--NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEE 61
M TS NILYQ+HPKQPLVNGT RSSYSC+ RG + RVLS RC QL VAAIVEE
Sbjct: 1 METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
Query: 62 VHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSD 121
VHKLES E PRFRW+EVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICFSPQ GNLSD
Sbjct: 61 VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
Query: 122 LLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK 181
+LAAWVRIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 182 QNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRS 241
+N+LE+AE++LLSMRERGFACDQITLTTMIHIYSKAD+L+ AKQTFEELKLLE+P+DRRS
Sbjct: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
Query: 242 YGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQ 301
Y AMIMA++RAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
Query: 302 LAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 361
LAAIPPD+KLCGLLINAYLMA QSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 362 AALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
AALELLIDLEK+ L++GKEASE+LAAWLKRLGVVEEVELVLREY K ASG
Sbjct: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411
BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match:
A0A5D3D032 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004020 PE=4 SV=1)
HSP 1 Score: 680.6 bits (1755), Expect = 4.0e-192
Identity = 347/406 (85.47%), Postives = 378/406 (93.10%), Query Frame = 0
Query: 4 TSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKL 63
TSNILYQLH PLVNGT +S S +W+ SI VL+S RCSQ+ATV AIV+E+HKL
Sbjct: 5 TSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELHKL 64
Query: 64 ESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAA 123
ESE E PRFRWVEVG +ITE QKQA+SQLPPKMTK+CKA+MKQIICFSPQKG LSD+LAA
Sbjct: 65 ESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAA 124
Query: 124 WVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRL 183
WVRIMKPERADWLSVLKHLR+LNHPLYI+VAEAALVEITFEANTRDYTKIIHHYGKQN+L
Sbjct: 125 WVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQL 184
Query: 184 ENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAM 243
E+AEKVLL+MRERGFACDQITLTTMIHIYSKADKL AKQTFEELKLLEQ +D+RSYGAM
Sbjct: 185 EDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAM 244
Query: 244 IMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAI 303
IMAYVRAG+PEEGE IL+EMDAK+IYAGSEVYKALLRAYSMAG+AEGAQRVFDAIQLAAI
Sbjct: 245 IMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAI 304
Query: 304 PPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALE 363
PPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLNAALE
Sbjct: 305 PPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALE 364
Query: 364 LLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGAS 410
LLIDLEKDN+M+GKEAS+ILAAWLKRLGVVEE+E+VLREYTAK S
Sbjct: 365 LLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAKEVS 403
BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match:
A0A1S3AWA7 (pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN=LOC103483346 PE=4 SV=1)
HSP 1 Score: 679.9 bits (1753), Expect = 6.8e-192
Identity = 346/403 (85.86%), Postives = 377/403 (93.55%), Query Frame = 0
Query: 4 TSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKL 63
TSNILYQLH PLVNGT +S S +W+ SI VL+S RCSQ+ATV AIV+E+HKL
Sbjct: 5 TSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELHKL 64
Query: 64 ESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAA 123
ESE E PRFRWVEVG +ITE QKQA+SQLPPKMTK+CKA+MKQIICFSPQKG LSD+LAA
Sbjct: 65 ESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAA 124
Query: 124 WVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRL 183
WVRIMKPERADWLSVLKHLR+LNHPLYI+VAEAALVEITFEANTRDYTKIIHHYGKQN+L
Sbjct: 125 WVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQL 184
Query: 184 ENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAM 243
E+AEKVLL+MRERGFACDQITLTTMIHIYSKADKL AKQTFEELKLLEQ +D+RSYGAM
Sbjct: 185 EDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAM 244
Query: 244 IMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAI 303
IMAYVRAG+PEEGE IL+EMDAK+IYAGSEVYKALLRAYSMAG+AEGAQRVFDAIQLAAI
Sbjct: 245 IMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAI 304
Query: 304 PPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALE 363
PPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLNAALE
Sbjct: 305 PPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALE 364
Query: 364 LLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAK 407
LLIDLEKDN+M+GKEAS+ILAAWLKRLGVVEE+E+VLREYTAK
Sbjct: 365 LLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAK 400
BLAST of Lsi05G019650 vs. ExPASy TrEMBL
Match:
A0A5A7U612 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G002570 PE=4 SV=1)
HSP 1 Score: 679.9 bits (1753), Expect = 6.8e-192
Identity = 346/403 (85.86%), Postives = 377/403 (93.55%), Query Frame = 0
Query: 4 TSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKL 63
TSNILYQLH PLVNGT +S S +W+ SI VL+S RCSQ+ATV AIV+E+HKL
Sbjct: 5 TSNILYQLH--LPLVNGTSNTSSSRYWKDSI-----VLNSRRRCSQMATVTAIVDELHKL 64
Query: 64 ESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAA 123
ESE E PRFRWVEVG +ITE QKQA+SQLPPKMTK+CKA+MKQIICFSPQKG LSD+LAA
Sbjct: 65 ESEREKPRFRWVEVGYNITETQKQAISQLPPKMTKKCKAVMKQIICFSPQKGELSDMLAA 124
Query: 124 WVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRL 183
WVRIMKPERADWLSVLKHLR+LNHPLYI+VAEAALVEITFEANTRDYTKIIHHYGKQN+L
Sbjct: 125 WVRIMKPERADWLSVLKHLRILNHPLYIQVAEAALVEITFEANTRDYTKIIHHYGKQNQL 184
Query: 184 ENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAM 243
E+AEKVLL+MRERGFACDQITLTTMIHIYSKADKL AKQTFEELKLLEQ +D+RSYGAM
Sbjct: 185 EDAEKVLLTMRERGFACDQITLTTMIHIYSKADKLKLAKQTFEELKLLEQSLDKRSYGAM 244
Query: 244 IMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAI 303
IMAYVRAG+PEEGE IL+EMDAK+IYAGSEVYKALLRAYSMAG+AEGAQRVFDAIQLAAI
Sbjct: 245 IMAYVRAGLPEEGEKILKEMDAKDIYAGSEVYKALLRAYSMAGDAEGAQRVFDAIQLAAI 304
Query: 304 PPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALE 363
PPDEKLCGLL+NAYLMAGQS+KAQIAFDNMRRAG+EPSDKCIAL LSAYEKENRLNAALE
Sbjct: 305 PPDEKLCGLLMNAYLMAGQSRKAQIAFDNMRRAGIEPSDKCIALALSAYEKENRLNAALE 364
Query: 364 LLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAK 407
LLIDLEKDN+M+GKEAS+ILAAWLKRLGVVEE+E+VLREYTAK
Sbjct: 365 LLIDLEKDNVMVGKEASQILAAWLKRLGVVEEIEIVLREYTAK 400
BLAST of Lsi05G019650 vs. NCBI nr
Match:
XP_038903030.1 (pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida] >XP_038903038.1 pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida])
HSP 1 Score: 723.0 bits (1865), Expect = 1.4e-204
Identity = 365/407 (89.68%), Postives = 389/407 (95.58%), Query Frame = 0
Query: 4 TSNILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKL 63
TS+I YQLHPKQPLVNGTPRSSY+ +WRGSI+QT VLSS RCS+LATVAAIVEEVHKL
Sbjct: 6 TSSIFYQLHPKQPLVNGTPRSSYTRYWRGSIEQTLSVLSSRRRCSRLATVAAIVEEVHKL 65
Query: 64 ESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAA 123
E+E E PRFRWVEVGSDITE+QKQA+SQLPPKMTKRCKALMKQIICFSPQKG+LSD+L A
Sbjct: 66 ENEREKPRFRWVEVGSDITEIQKQAISQLPPKMTKRCKALMKQIICFSPQKGSLSDMLTA 125
Query: 124 WVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRL 183
WVRIMKPERADWLSVLKHLR+ NHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK+N+L
Sbjct: 126 WVRIMKPERADWLSVLKHLRISNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKRNQL 185
Query: 184 ENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAM 243
E+AEKVLLSMRERG ACDQITLTTMIHIYSKAD+LN AKQTFEELKLLE+ +DRRSYGAM
Sbjct: 186 EDAEKVLLSMRERGLACDQITLTTMIHIYSKADRLNLAKQTFEELKLLEKSLDRRSYGAM 245
Query: 244 IMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAI 303
IMAYVRAGMPEEGENIL+EMDAK+IYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLA I
Sbjct: 246 IMAYVRAGMPEEGENILKEMDAKQIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAVI 305
Query: 304 PPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALE 363
PPDEKLCGLLINAYLMAG+S+KAQIAFDNMRRAG+EPSDKCIALVLSAYE ENRLNAALE
Sbjct: 306 PPDEKLCGLLINAYLMAGESRKAQIAFDNMRRAGIEPSDKCIALVLSAYETENRLNAALE 365
Query: 364 LLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
LLIDLEKDNL++ KEASEILAAWLKRLGVVEEVELVLREYTAK SG
Sbjct: 366 LLIDLEKDNLVVRKEASEILAAWLKRLGVVEEVELVLREYTAKEVSG 412
BLAST of Lsi05G019650 vs. NCBI nr
Match:
XP_022980308.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980309.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980310.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980311.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980312.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022980313.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima])
HSP 1 Score: 697.6 bits (1799), Expect = 6.5e-197
Identity = 353/405 (87.16%), Postives = 379/405 (93.58%), Query Frame = 0
Query: 6 NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKLES 65
NILYQ+HPKQPLVNGT RSSYSC+ RG + RVLS C QLATVAAIVEEVHKLES
Sbjct: 7 NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRTCYQLATVAAIVEEVHKLES 66
Query: 66 EGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAAWV 125
E PRFRWVEVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICF PQ G+LSD+LAAWV
Sbjct: 67 GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFLPQNGHLSDMLAAWV 126
Query: 126 RIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLEN 185
RIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGKQN+LE+
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKQNQLED 186
Query: 186 AEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIM 245
AE++LLSMRERGFACDQITLTTMIHIYSKAD+LN AKQTFEELKLLE+P+DRRSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELNLAKQTFEELKLLEEPLDRRSYDAMIM 246
Query: 246 AYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 305
A+VRAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQLAAIPP
Sbjct: 247 AFVRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQLAAIPP 306
Query: 306 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 365
D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366
Query: 366 IDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
IDLEK+ LM+GKEASE+LAAWLKRLGVVEEVELVLREY K ASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411
BLAST of Lsi05G019650 vs. NCBI nr
Match:
XP_023526280.1 (pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023526281.1 pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 696.8 bits (1797), Expect = 1.1e-196
Identity = 351/405 (86.67%), Postives = 380/405 (93.83%), Query Frame = 0
Query: 6 NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEEVHKLES 65
NILYQ+HPKQPLVNGT RSSYSC+ RG + RVLS RC QLATVAAIVEEVH LES
Sbjct: 7 NILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLATVAAIVEEVHTLES 66
Query: 66 EGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSDLLAAWV 125
E PRFRWVEVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICFSPQ GNLSD+LAAWV
Sbjct: 67 GREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSDMLAAWV 126
Query: 126 RIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLEN 185
RIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGK+N+LE+
Sbjct: 127 RIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGKRNQLED 186
Query: 186 AEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIM 245
AE++LLSMRERGFACDQITLTTMIHIYSKAD+L+ AKQTFEELKLLE+P+DRRSY AMIM
Sbjct: 187 AERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRSYDAMIM 246
Query: 246 AYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP 305
A++RAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NA+GAQRVFDAIQLAAIPP
Sbjct: 247 AFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNADGAQRVFDAIQLAAIPP 306
Query: 306 DEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 365
D+KLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL
Sbjct: 307 DDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELL 366
Query: 366 IDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
IDLEK+ LM+GKEASE+LAAWLKRLGVVEEVELVLREY K ASG
Sbjct: 367 IDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411
BLAST of Lsi05G019650 vs. NCBI nr
Match:
KAG6582566.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018949.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 693.0 bits (1787), Expect = 1.6e-195
Identity = 351/411 (85.40%), Postives = 381/411 (92.70%), Query Frame = 0
Query: 2 MRTS--NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEE 61
M TS NILYQ+HPKQPLVNGT RSSYSC+ RG + RVLS RC QLA VAAIVEE
Sbjct: 1 METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLAIVAAIVEE 60
Query: 62 VHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSD 121
VH LES E PRFRWVEVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICFSPQ GNLSD
Sbjct: 61 VHTLESGREKPRFRWVEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
Query: 122 LLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK 181
+LAAWVRIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 182 QNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRS 241
+N+LE+AE++LL M+ERGFACDQITLTTMIHIYSKAD+LN AKQTFE++KLLE+P+DRRS
Sbjct: 181 RNQLEDAERILLCMKERGFACDQITLTTMIHIYSKADELNLAKQTFEDIKLLEEPLDRRS 240
Query: 242 YGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQ 301
Y AMIMA++RAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
Query: 302 LAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 361
LAAIPPD+KLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 362 AALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
AALELLIDLEK+ LM+GKEASE+LAAWLKRLGVVEEVELVLREY K ASG
Sbjct: 361 AALELLIDLEKEKLMVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411
BLAST of Lsi05G019650 vs. NCBI nr
Match:
XP_022924339.1 (pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_022924340.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_022924341.1 pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata])
HSP 1 Score: 691.8 bits (1784), Expect = 3.6e-195
Identity = 351/411 (85.40%), Postives = 381/411 (92.70%), Query Frame = 0
Query: 2 MRTS--NILYQLHPKQPLVNGTPRSSYSCHWRGSIDQTFRVLSSPPRCSQLATVAAIVEE 61
M TS NILYQ+HPKQPLVNGT RSSYSC+ RG + RVLS RC QL VAAIVEE
Sbjct: 1 METSVCNILYQIHPKQPLVNGTARSSYSCYCRGLTGRRLRVLSPRRRCYQLCAVAAIVEE 60
Query: 62 VHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKGNLSD 121
VHKLES E PRFRW+EVGSDITEMQKQA+SQLPPKMTKRCKA+MKQIICFSPQ GNLSD
Sbjct: 61 VHKLESGREKPRFRWLEVGSDITEMQKQAISQLPPKMTKRCKAVMKQIICFSPQNGNLSD 120
Query: 122 LLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGK 181
+LAAWVRIMKP+RADWLSVLKHLR+L+HPLYIEVAEAALVE TFEA+TRDYTKIIH+YGK
Sbjct: 121 MLAAWVRIMKPKRADWLSVLKHLRILDHPLYIEVAEAALVERTFEASTRDYTKIIHYYGK 180
Query: 182 QNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRS 241
+N+LE+AE++LLSMRERGFACDQITLTTMIHIYSKAD+L+ AKQTFEELKLLE+P+DRRS
Sbjct: 181 RNQLEDAERILLSMRERGFACDQITLTTMIHIYSKADELSLAKQTFEELKLLEEPLDRRS 240
Query: 242 YGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQ 301
Y AMIMA++RAGMPEEGENIL+EMD K+IYAGSEVYKALLRAYSMA NAEGAQRVFDAIQ
Sbjct: 241 YDAMIMAFIRAGMPEEGENILKEMDEKDIYAGSEVYKALLRAYSMASNAEGAQRVFDAIQ 300
Query: 302 LAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 361
LAAIPPD+KLCGLLINAYLMA QSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN
Sbjct: 301 LAAIPPDDKLCGLLINAYLMADQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLN 360
Query: 362 AALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKGASG 411
AALELLIDLEK+ L++GKEASE+LAAWLKRLGVVEEVELVLREY K ASG
Sbjct: 361 AALELLIDLEKEKLVVGKEASEVLAAWLKRLGVVEEVELVLREYAVKEASG 411
BLAST of Lsi05G019650 vs. TAIR 10
Match:
AT1G01970.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 451.1 bits (1159), Expect = 9.8e-127
Identity = 217/359 (60.45%), Postives = 292/359 (81.34%), Query Frame = 0
Query: 47 CSQLATVAAIVEEVHKLESEGEIPRFRWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQ 106
CS + + EV + E + F W +VG ++TE Q +A++++P KM+KRC+ALM+Q
Sbjct: 45 CSCKCNASLAIGEVVEKEDAEQSRSFNWADVGLNLTEEQDEAITRIPIKMSKRCQALMRQ 104
Query: 107 IICFSPQKGNLSDLLAAWVRIMKPERADWLSVLKHLRVLNHPLYIEVAEAALVEITFEAN 166
IICFSP+KG+ DLL AW+R M P RADWLS+LK L+ L+ P YI+VAE +L++ +FEAN
Sbjct: 105 IICFSPEKGSFCDLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEAN 164
Query: 167 TRDYTKIIHHYGKQNRLENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFE 226
RDYTKIIH+YGK N++E+AE+ LLSM+ RGF DQ+TLT M+ +YSKA A++TF
Sbjct: 165 ARDYTKIIHYYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFN 224
Query: 227 ELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAG 286
E+KLL +P+D RSYG+MIMAY+RAG+PE+GE++LREMD++EI AG EVYKALLR YSM G
Sbjct: 225 EIKLLGEPLDYRSYGSMIMAYIRAGVPEKGESLLREMDSQEICAGREVYKALLRDYSMGG 284
Query: 287 NAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIA 346
+AEGA+RVFDA+Q+A I PD KLCGLLINAY ++GQSQ A++AF+NMR+AG++ +DKC+A
Sbjct: 285 DAEGAKRVFDAVQIAGITPDVKLCGLLINAYSVSGQSQNARLAFENMRKAGIKATDKCVA 344
Query: 347 LVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTA 406
LVL+AYEKE +LN AL L++LEKD++M+GKEAS +LA W K+LGVVEEVEL+LRE+++
Sbjct: 345 LVLAAYEKEEKLNEALGFLVELEKDSIMLGKEASAVLAQWFKKLGVVEEVELLLREFSS 403
BLAST of Lsi05G019650 vs. TAIR 10
Match:
AT1G19520.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 246.5 bits (628), Expect = 3.7e-65
Identity = 135/337 (40.06%), Postives = 206/337 (61.13%), Query Frame = 0
Query: 73 RWVEVGSDITEMQKQAVSQLPPKMTKRCKALMKQIICFSPQKG-NLSDLLAAWVRIMKPE 132
+WVE+ I E +++A + P +T +CK +M+++ S Q+G + S LLA W +++P
Sbjct: 291 KWVEMADKIHEAEEEADWREPKPVTGKCKLVMEKL--ESLQEGDDPSGLLAEWAELLEPN 350
Query: 133 RADWLSVLKHLRVLNHPLYIEVAEAALVEITFEANTRDYTKIIHHYGKQNRLENAEKVLL 192
R DW++++ LR N Y++VAE L E +F A+ DY+K+IH + K+N +E+ E++L
Sbjct: 351 RVDWIALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHIEDVERILK 410
Query: 193 SMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAG 252
M + G D +T T ++H+YSK+ A + FE LK D + Y AMI+ YV AG
Sbjct: 411 KMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAMILGYVNAG 470
Query: 253 MPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPP-DEKLC 312
P+ GE +++EM AKE+ A EVY ALLRAY+ G+A GA + ++Q A+ P +
Sbjct: 471 KPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASDGPLSFEAY 530
Query: 313 GLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEK 372
L + AY AGQ KA+ FD MR+ G +P DKCIA ++ AY+ EN L+ AL LL+ LEK
Sbjct: 531 SLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDKALRLLLQLEK 590
Query: 373 DNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKG 408
D + IG +L W+ LG++EE E +L + + G
Sbjct: 591 DGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLG 625
BLAST of Lsi05G019650 vs. TAIR 10
Match:
AT2G18940.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 86.3 bits (212), Expect = 6.4e-17
Identity = 65/239 (27.20%), Postives = 112/239 (46.86%), Query Frame = 0
Query: 170 YTKIIHHYGKQNR-LENAEKVLLSMRERGFACDQITLTTMIHIYSKADKLNFAKQTFEEL 229
Y I+ +GK R VL MR +G D+ T +T++ ++ L AK+ F EL
Sbjct: 248 YNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAEL 307
Query: 230 KLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREMDAKEIYAGSEVYKALLRAYSMAGNA 289
K +Y A++ + +AG+ E ++L+EM+ A S Y L+ AY AG +
Sbjct: 308 KSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFS 367
Query: 290 EGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQSQKAQIAFDNMRRAGLEPSDKCIALV 349
+ A V + + + P+ +I+AY AG+ +A F +M+ AG P+ V
Sbjct: 368 KEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 350 LSAYEKENRLNAALELLIDLEKDNLMIGKEASEILAAWLKRLGVVEEVELVLREYTAKG 408
LS K++R N +++L D++ + + + A G+ + V V RE + G
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
BLAST of Lsi05G019650 vs. TAIR 10
Match:
AT2G35130.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 85.1 bits (209), Expect = 1.4e-16
Identity = 67/259 (25.87%), Postives = 121/259 (46.72%), Query Frame = 0
Query: 151 IEVAEAALVEI-TFEANTRDYTKIIHH---YGKQNRLENAEKVL-LSMRERGFACDQITL 210
IE AE LVE+ + + +++ G R N E+ + + R + C T
Sbjct: 206 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 265
Query: 211 T--TMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREM 270
T MI++Y KA K + + + E++ + + +Y A++ A+ R G+ E+ E I ++
Sbjct: 266 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 325
Query: 271 DAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQS 330
+ VY AL+ +YS AG GA +F +Q PD ++++AY AG
Sbjct: 326 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 385
Query: 331 QKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEIL 390
A+ F+ M+R G+ P+ K L+LSAY K + ++ ++ ++ + +
Sbjct: 386 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 445
Query: 391 AAWLKRLGVVEEVELVLRE 403
RLG ++E +L E
Sbjct: 446 LNLYGRLGQFTKMEKILAE 464
BLAST of Lsi05G019650 vs. TAIR 10
Match:
AT2G35130.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 85.1 bits (209), Expect = 1.4e-16
Identity = 67/259 (25.87%), Postives = 121/259 (46.72%), Query Frame = 0
Query: 151 IEVAEAALVEI-TFEANTRDYTKIIHH---YGKQNRLENAEKVL-LSMRERGFACDQITL 210
IE AE LVE+ + + +++ G R N E+ + + R + C T
Sbjct: 228 IERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTE 287
Query: 211 T--TMIHIYSKADKLNFAKQTFEELKLLEQPMDRRSYGAMIMAYVRAGMPEEGENILREM 270
T MI++Y KA K + + + E++ + + +Y A++ A+ R G+ E+ E I ++
Sbjct: 288 TYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQL 347
Query: 271 DAKEIYAGSEVYKALLRAYSMAGNAEGAQRVFDAIQLAAIPPDEKLCGLLINAYLMAGQS 330
+ VY AL+ +YS AG GA +F +Q PD ++++AY AG
Sbjct: 348 QEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLH 407
Query: 331 QKAQIAFDNMRRAGLEPSDKCIALVLSAYEKENRLNAALELLIDLEKDNLMIGKEASEIL 390
A+ F+ M+R G+ P+ K L+LSAY K + ++ ++ ++ + +
Sbjct: 408 SDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSM 467
Query: 391 AAWLKRLGVVEEVELVLRE 403
RLG ++E +L E
Sbjct: 468 LNLYGRLGQFTKMEKILAE 486
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LPC4 | 1.4e-125 | 60.45 | Pentatricopeptide repeat-containing protein At1g01970 OS=Arabidopsis thaliana OX... | [more] |
Q940Z1 | 3.4e-39 | 42.13 | Pentatricopeptide repeat-containing protein At1g19525 OS=Arabidopsis thaliana OX... | [more] |
O64624 | 9.0e-16 | 27.20 | Pentatricopeptide repeat-containing protein At2g18940, chloroplastic OS=Arabidop... | [more] |
O82178 | 2.0e-15 | 25.87 | Pentatricopeptide repeat-containing protein At2g35130 OS=Arabidopsis thaliana OX... | [more] |
Q9LQ14 | 9.9e-15 | 22.00 | Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1IR15 | 3.1e-197 | 87.16 | pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita maxima OX=366... | [more] |
A0A6J1EER0 | 1.7e-195 | 85.40 | pentatricopeptide repeat-containing protein At1g01970 OS=Cucurbita moschata OX=3... | [more] |
A0A5D3D032 | 4.0e-192 | 85.47 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3AWA7 | 6.8e-192 | 85.86 | pentatricopeptide repeat-containing protein At1g01970 OS=Cucumis melo OX=3656 GN... | [more] |
A0A5A7U612 | 6.8e-192 | 85.86 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
XP_038903030.1 | 1.4e-204 | 89.68 | pentatricopeptide repeat-containing protein At1g01970 [Benincasa hispida] >XP_03... | [more] |
XP_022980308.1 | 6.5e-197 | 87.16 | pentatricopeptide repeat-containing protein At1g01970 [Cucurbita maxima] >XP_022... | [more] |
XP_023526280.1 | 1.1e-196 | 86.67 | pentatricopeptide repeat-containing protein At1g01970 isoform X1 [Cucurbita pepo... | [more] |
KAG6582566.1 | 1.6e-195 | 85.40 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
XP_022924339.1 | 3.6e-195 | 85.40 | pentatricopeptide repeat-containing protein At1g01970 [Cucurbita moschata] >XP_0... | [more] |
Match Name | E-value | Identity | Description | |
AT1G01970.1 | 9.8e-127 | 60.45 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G19520.1 | 3.7e-65 | 40.06 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT2G18940.1 | 6.4e-17 | 27.20 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G35130.1 | 1.4e-16 | 25.87 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G35130.2 | 1.4e-16 | 25.87 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |