Lsi05G019380 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G019380
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	tRNA threonylcarbamoyladenosine dehydratase isoform X1
Location	chr05: 26537963 .. 26545667 (+)
RNA-Seq Expression	Lsi05G019380
Synteny	Lsi05G019380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCACGGTCGGTTCATGCATTTGTGGAGGCCGGCGGGAAAGGCGAGAGGTGGGTTGAAGGAAATGGAGGGAAAATTCAAGTCTCTTTCATTGGTGGGAGCTGGAGCTCTCTTCGGTTCTGTTTCTACCTTCTTCATCCTCAAGCTCCTTCACAGGCAAGTTTAGCGGTAGAATCGCTTCTTTCTTATGCCGTTTGTTCCAATTTTTTTTATTCATCGATCACTCTCACATGCTTGATCTAGAGCTTGAGTAATAGTCGGCGAAATCCAAAACTTAACAGCACAGATAGTCTTCTAGCTTAGGGTTATATCACTTGAAAGAAACAATCGAACTTCTGATTATGAACTCTTAAGATGGTAGTTTCTTGAAGGGATGCTGATAATTAGTTTCAATTTGCAGACAGATCGCGAACCAAGCTGAGACGAAGGCAACCAAGCTGCGTGGTAAGTAATCATCGCAATAAATACTAAATAGAGGCTTTCCTCCATCCTATGGCTTATTCGAAGGAAAACTTTACTAAACACGATGGTTTATGTAGCACAAAGTCTGTTCATGGCTGGTTCAAGCTTCAATTTTTTTGGCTCTACTTTCGTGCACTCCGCAGTTGAAGCTTTAGTTAATCTTGAATTATTATCTCTTAGCATACATAAGTAGACTACAAGAGTCACATTAATGTTGATAGTCTTCTATGATGTGATCATAAATAAACTATGGGGGGTGGCGGTAGCTGTAGACATTTATAATTTCTTTTTTTAAAGAGGAAATAAAATTCAATTGAAAACAATGTACCCAAACGTTTTGTAGTTTAGGGGTCTTAAGCATCTGATGGCTTTGATTTGTTGTGCAAAGGTTTTTTTTAATACAAACCAAACTATTGGCATGTTTCCTCTTAATTTATTTTTTTTTTTCCTTCCTCATTTGTTTCAGAGGTTTATTTCATCAACTTGTGTTCTATTCTCAGTCTAAGTTACTCTGGCTCTAAACTCAATTTTGCTAAGATCTTCTTCCCTCCTTTCAAAAACCTTTTAGCAACCCAAATTTACCCAAACCAGACATAAAGCTGCTCAAATTTGTTTTTTCATTTCCACATTTTTGTATCATCATTAAGTTTTGCTGCAACTTCTACTAATAGTAAACGAGCATTAGCTTGAAATATAGAACCACTGGCTGCCACACAGTTCATATTGCTGGTGGATTGAGTATGCATTATGGCGCTCAAGTAAATATTTAATCTTCATATTAACCCTTGTATCCATAGCCCAGGTCAGGGAAGGTTAGAACGTATCTTTCTTTTCTTTTTCTTTTCTTGTCTTCTTTTTATACTTCAGAAAGAAGTCCACATCATCGTTGAAGTGCTCTAATGTGTAATAAGTGAAACACAGTAATTTTATTCTTGATTGAAATTGATGTGATCTTGTTTGTAGATTTTCTGGTGTCAGTGTAGAGCATGAGAAATGACATCAATGCTCATGTCTCAAAATGTTGATTTTCATGTTTCTGTTGGAATTTGGAACTTACTTAAAGCAAAATTTAGGGTATTTGTTTCATTAAAATTTATAATAATATGATTCTTATAATGATTGTCGAAGGCATTTTATCGAAAAAAAATATAATGTGTTTTGAAGGTAATGGACATATGGTTGAGACTACTATAAAGGGCAGTCCTGTAGTTGGGTGCACCAATCGTGGAATTTTTGATGTAGATCTTCTAACTGATGAAATTGTTTCCGAACAACTAACGAGGTATTTTTGTTTGATTTTGGAAGATTGTATTGTTGTGATAGATTTGACGTGTTGTTTTTTTGGAATTTTTTGGTTTTTCAAGAATTTTTATTAAGATTAATCTCTTTTTATTAATCCTCTGATCTACTAACTTGCGACCATATGCATAGGGTTCTATTTTGCAACCCTTTTCTGGTTTTCTTTTTTGTTATCCCTGGTTGGATATATATTATTATTATTGTTGTTGTTATTATTATTATTATTCCTACCTTCCAGTGTCTTTCAGTGCCCTCATACTTATTCATGCTCAAGCTTGATACTTGATAGGTATATGCTCTTTATTGTTTTCAATTTTGGAACTCAGGGTAGTGAATTCAAAACTGAGATTCCAGCGATACTTCCATATTTCAGCAAGTCTTTATGTTCTTCACTGTGCTGTCATCAAGGGGAGTCTAGGATGAGAGAAGCAAATAGGGATAGTTGTCCACCCACGTCTTCCCAAAATTGAACTGAAGCTCCATATACAACCTTGTTAATTGATCTCTCTCTTCAATAATTGTTCAACATTTTGAGACAGAGAACATAGAACTCCTGTTTCTGCGTAATAAGTGAGCATAGACAACCTTGAAAGTGTTCCATATTAAGATGCAATAATTTTATGCTATTTAAATCTCTAGTTTGTTGTTTGAAGTGGGTGTGATGGGGTGTTATATTAGGGTTATATTTGGAATTATTTTGATTGTTTGTTTTATTTGTTTTATAAGTATTAAGGGTTAAATTAATTAATCTTCCTTGGGTTAATATTGTTTTAACCTTTGTAATTGATTCCGTTTCCTTAAAGCCTAGTCGAATATAGAGGAAATGGCTCTCTTATGTGCACAATTAATTTGAGATGAATAAAATAACTTGAGATTTCCTTGCTTCATCAAGTTATGCTTGACGTTTATACTTTATCATTAATCTGCTTTTCCTTTAACATGTTAGTTATATGGCTGTTGTCATTAGGAACATTCAGTTCTTTGGCCTTAGCTCACAGAAGAATGTGACTGCATCCTATGTTGTCGTAATTGGTCTTGGTGGCGTTGGGAGTCATGCTGCTATGATGCTTCTTCGATCAGGGGTTGGCAGGCTTCTCCTTGTTGACTTTGACCAGGTCTTATGCATATCTTTCAGATGGTGACTTCTTTTTTTGTGCAATCTGTTTGATTCTACCTCCTCGTTGAATCTCTGACTTCTGCTACTTGCCAATCTGCAAGATTTCCTTTCCCTTCTTGTGAATGTGATTTTTAGTGTTCATTAGCTTTTATATCCAATATAATACTTTTATATAGTTTGGCATGAACCCCCCAATTTCCTAACACAACTGTTTTTATTTTAAGTTTTTTATTTGTATCAATTTTCATTATGATTATATATAAGAAACCGGCTTTCATTATATACATTGGTTGTCGGTACATTATATCTACATCTAAATGTATGAAAAAAAAAATAATGCATCTATATTCTCTCTTGTAGCTTGTATACTCATTTGATAATTGATGCATCTATATTCTCTCTTGTAGCTTGTATACTCATTTGATAATTGCTTGAAAAGGTGTCACTTTCTTCTCTAAATCGACATGCCGTTGCAACAAGAGCAGATGTTGGTGTCCCAAAAGCTCAGTGCCTCAAGGAGCACTTTCTGTCCATCTTTCCAGAGTGTCAAGTAGAAGCAAAAGTGCTATTATATGATGCAACATCTGAAGAAGAAATTCTTTCTGGGAAACCTGATTTTGTTCTGGACTGCATTGACAATATTGATACAAAGGTGCCTATTTATCTGCAAGACTGTAACTTACAATAAATCTTTCTTAATCTCTCTTCTTTTATATATATATATATATATATATAAAGATTTATTGGCAGTGGCTTCAATATTGATGCTAAATAGATGTATAGAGAGAGGATAAATAAGGATGATGGTATTTAGAAAATTAATTTACCAAAACTGTTTGTGAAACACTATACATTTGCGCATGGGGTATTTATAGGGTCCCTCCTGTTAAGTTTACATTTGCGAGCAAGAATAGGAGAGAGAACAAGGGCCTTAAAGATGGGGGCCACTTTTGATCAGCCTTTGTCAGCATAGCTTTCTTATTTCAGTGGGCCCAAGTTAATTAACTAAAAGCGGGTGGTTAGAGAAGAGGATTATATAAAGAAGGAATGTATGTGAAAAGGCGAATGAGAGAGTTATGGTGCATCCAACATCTTTGGGCTAGGAGGAATCAAGTTCCTCATATATAACCTAAGTTCATAATGAAGGATTAAAAGAACTACCGTTCAGTGAGGTGGATGGAAACGCACGTGTTACTTGTATAATGTTGTTCCTTTTGGGTGATAAGTTTTCCCTGTAACAAGCCTTTTGGCCAAAGGAATAGTTTGTTTATTTGCATTTTAATCATTTTAAGCAATTGATATTGTCAAATTTTACTTTAATTTATTTATGTTTACATTGGAATGTGATTGTCTAATAGGAATTTATTTTTAAATGCTTTGTAAATCATATGTGATAGGTATCCCTTCTTGCTGCATGTGTACGTAGGGGATTGAAAGTATTATCAGCAACAGGAGCTGGAGCTCGAGCTGACCCAACAAGAATTCGTGTGGCTGATTTAAGAGAGTCAACAAATGACCCATTATCTCGAGCTGTAATGTTTATTGCATGTGACAAGAGTTTTCTTTAAGCTAAAAAATTTAATAGTCAACTTCCTTCGTTTGAACTTTGAAGGTTGCATCAAAGAAGTTATTGGTTTCTGGAAATTGTTTTAAATTGAACTCTTAATTTAGAGGATAGTTTATTATATATTTTGGCTCATATAAACTCCTAAACCACTTTTTCTTTTATTTTAATATTTGGGATCCAATTAGAAGGTTAGAGAGTGACTTAGTAAGTGAAGGAGTGATTAACCTTTGTTAGCAAAATACTTAAAAGCATTTGGAAAGATCATTTTTGTGATAAGTAGATATCAACTTCTTTTTCTTGTGTTGAGTTATTAATATGCCATTGTACCATATGTTTGGTAATTGTATAGTAACGCATAAACATTTTAAACCTCCTTTTTGGAAATTTAGGCTGAGGCTATTTGTTAAATATAGGTGAGGCATCGTTTGCGGAAAGGTTATGGCATTGAAGGGGGCATTCCTGTTGTATTTTCTTTAGAAAAACCCAAAGCAAAGCTGCTTCCATTCCAAGGACCAAGCGGAGAAGCTGAAAATCCTTCAGATTATCAGGTGAGGAATATACTTGTAGTACGAAATGATCGTATTTATGTCTTTAGAGCAAGACTAACCTGCATTTGGATATGTTATGTACTTGCTTCCGAGGTTGACATAGACTTTACAATGAAAGAATATTTTTGATAGGAAAATACTAAGAAAATATTACTGTGAATAAACATTTTAAATTTTTATCATGATATCAGATAGTTCCTGGGTTCAGAGTTCGCATCATACCTGTTCTAGGTACCATCCCTGCAATTTTTGGACAGGTAATGGCCTCGTATGTTGTGACACAACTAGCAGGGCTTCAAGTGGAAACAGAACCTATCGTTAATTTGGACACAGATCATTATAGGTTGCTTCATCAGCGACTCATTGAGCATGAAGAATCATTATATGGCACTGCCATGCAAGTCCAGGTGTGAAGGCTTTCACCTGTAGATGAATTTTGCATGAGTTATTTAAAGTATCTATTGTCCTTTTGTTTTCTTTTGGATTTGTTTGCATGATGCTAGTTACTAGGTTAATCACATTAAATGGAATGATGTTGATGTTTTCCAAGTTTGCATTTTATGAATTTAAGTATACTTTTTAGGCTTGAAGGCATAGTTTTGATTGATTCTTTTATCACAAGTACTTCAATCAGAAGAATTTAGTCTAAAGTGCCCAATAACAAATCACTATGATGTGTGTGGTTCTACAGTTTTAAAAAAGCTTTTGAGTGCCTTTTGATCAAGCATCAAGTATACAATCACTGAATGCTTTTTTGCGAAGTACTTTAAAGTATCTTTTACACTTGTTTCAAAAGCACTTTAATATTTCTCCTAAACAAAGCCTGTCATTCATTTGGACATCGATCAGGGTGAATCTAAGTGAGAAGTACTTTTATACCAGTTAAGCACTTTTCAGTTTTCATGTCTGAATGAAATTCTCCTCTCATCAACAGATGAAATCTTTTTTGTTAACAACAATCAATCACTCAGTTGTTGGAATCCATTAGTTAGAATTCTAATCCTGTTTCTTTGTGCCATTTACTGTAGGTGGATGTTGAAGAAGTGATGTTTGTTGCAAAAGAGCTCTGGCATGGAAGAAGCGCAAGAGACCAGTCTGCGAAAGATGTTGGACGAGGAATGTGGCGAGCTATTAATGAATTAATGCTTGTGAGGTATGAATAGCTTTTCTGGCAGTGTTGTCTAGTATGCAATAATATTTTTTGTGGATTCAAATAAAAGATATCTGGGCCATACACTTTCTCTTTTCTTTGAACATGAACATATAATCATCTCCATTATTTAAAAGTATATATCTTCTTTTTGGGTTTTATATATCTTACTGAGGAAGATAAACGTATATTTCACTCAGAATTCTATAAAATTGCATTGATAACATTGGTGTTTGTTTCCATAACATGCGACATTGTGTCTTATGAGAATGAGGTGCTGCATGTCCCTAACATAAAACTAACAGAAAATTAAGATTGTAATAAGGTACGTGGATTTGTTATAGATGTTCAGTTTGTCTGGCGCTGACATTTTTGGTGTACAAATTAGGTGGGATCGAGCAAAACCAGCATCCGTGGCTAACTTAATTCTTTTGAAATTTAAAGAGGTAATTCAGCTTTACATATTAGAGGAATTTATGAAAATTATCCTGAAGTAAGTTTTACAGCTATGATCTGCAAGTCATCCGTGTTTGTCAGTTCTTTTATGTTTTCATTTGAGGTCATTTTCTTTCTCGACAAAGAATGTACTTCGTTTGAATGTGAGCGTCTACCAATGCTTCCTTGCACTTCTTCCCCCTTAAACTAAATATTATTTGTTTACAGTTGGTAACTTCAAAAGTTGAGGCAAGTCTCTTCTTCAATTTGTTTATTTATTTTTTATTTTTAAAAAAGGGAAAGTTTTTACAAGCTGTTGATGTTGATCACAGAACTCGTTGGTCTCTTACACCATTTCTAATATACAAAAGACCTAATAATAGAGACTTCTTATGAAACTGACTAAGCCTATGCAAATAAATTTCTCTTCGCATGATTACTTCACTGCTGCAAAGCAGCCATAGTCTTTTTACATCACCCCGTCATGTAGTTTTCATTTTGATGAAGAAAAAAAACGGTTGAATTGAAATATGTTCTAAATTTTATTTAGGTCCTAAACTTTCATACTTATTTCATTTTAGTCCATATACTTATAGATATTTTGTTTTGGTCCCAGTTGGTTTCATCTTGATCCTAAAAGAACTGATTGTGATTCATATAGCACTTTATGATTGATGGGAAATTGAGTTTTTATCAATGTGGTTCTTTGATGCAGGCTGATGAACATGAGTCATCGACCCTAGATGACATAAAGGAAAAAGAACCTGAATTCTTTAGGAGGGTAACTGCTATTTTGAAGCGAGCTGAGATTGAATTTTCTTTATGAGAAGATACGTTTCTTGTTTGGAATAGGTAAGGGTTTGTTGCTTTCATCCCCAATATTACCATTTCTTTAATAGTTCAACATGGGAGATACTAGATAGTGCCTTAAGCCTCAGATTAGCCCAATATTATCAGTTTTGAGTTAAAATTTTGGTCTTGTTAGTTATTTTTTGGATTATGAAATCTAGTTTTCTACTATTTGCTCATTCTTGGAGTTCACTGTATTTCTTAGTTCAAACACAACACTGGAGAATATTATATTTTATAAATTTTTATTAGACAAATCGTTAAGGTTGTGGAAGGCATCG

mRNA sequence

GCACGGTCGGTTCATGCATTTGTGGAGGCCGGCGGGAAAGGCGAGAGGTGGGTTGAAGGAAATGGAGGGAAAATTCAAGTCTCTTTCATTGGTGGGAGCTGGAGCTCTCTTCGGTTCTGTTTCTACCTTCTTCATCCTCAAGCTCCTTCACAGGCAAGTTTAGCGGTAGAATCGCTTCTTTCTTATGCCATCGCGAACCAAGCTGAGACGAAGGCAACCAAGCTGCGTGGTAATGGACATATGGTTGAGACTACTATAAAGGGCAGTCCTGTAGTTGGGTGCACCAATCGTGGAATTTTTGATGTAGATCTTCTAACTGATGAAATTGTTTCCGAACAACTAACGAGGAACATTCAGTTCTTTGGCCTTAGCTCACAGAAGAATGTGACTGCATCCTATGTTGTCGTAATTGGTCTTGGTGGCGTTGGGAGTCATGCTGCTATGATGCTTCTTCGATCAGGGGTTGGCAGGCTTCTCCTTGTTGACTTTGACCAGGTGTCACTTTCTTCTCTAAATCGACATGCCGTTGCAACAAGAGCAGATGTTGGTGTCCCAAAAGCTCAGTGCCTCAAGGAGCACTTTCTGTCCATCTTTCCAGAGTGTCAAGTAGAAGCAAAAGTGCTATTATATGATGCAACATCTGAAGAAGAAATTCTTTCTGGGAAACCTGATTTTGTTCTGGACTGCATTGACAATATTGATACAAAGGTATCCCTTCTTGCTGCATGTGTACGTAGGGGATTGAAAGTATTATCAGCAACAGGAGCTGGAGCTCGAGCTGACCCAACAAGAATTCGTGTGGCTGATTTAAGAGAGTCAACAAATGACCCATTATCTCGAGCTGTGAGGCATCGTTTGCGGAAAGGTTATGGCATTGAAGGGGGCATTCCTGTTGTATTTTCTTTAGAAAAACCCAAAGCAAAGCTGCTTCCATTCCAAGGACCAAGCGGAGAAGCTGAAAATCCTTCAGATTATCAGATAGTTCCTGGGTTCAGAGTTCGCATCATACCTGTTCTAGGTACCATCCCTGCAATTTTTGGACAGGTAATGGCCTCGTATGTTGTGACACAACTAGCAGGGCTTCAAGTGGAAACAGAACCTATCGTTAATTTGGACACAGATCATTATAGGTTGCTTCATCAGCGACTCATTGAGCATGAAGAATCATTATATGGCACTGCCATGCAAGTCCAGGTGGATGTTGAAGAAGTGATGTTTGTTGCAAAAGAGCTCTGGCATGGAAGAAGCGCAAGAGACCAGTCTGCGAAAGATGTTGGACGAGGAATGTGGCGAGCTATTAATGAATTAATGCTTGTGAGGTGGGATCGAGCAAAACCAGCATCCGTGGCTAACTTAATTCTTTTGAAATTTAAAGAGGCTGATGAACATGAGTCATCGACCCTAGATGACATAAAGGAAAAAGAACCTGAATTCTTTAGGAGGGTAACTGCTATTTTGAAGCGAGCTGAGATTGAATTTTCTTTATGAGAAGATACGTTTCTTGTTTGGAATAGGTAAGGGTTTGTTGCTTTCATCCCCAATATTACCATTTCTTTAATAGTTCAACATGGGAGATACTAGATAGTGCCTTAAGCCTCAGATTAGCCCAATATTATCAGTTTTGAGTTAAAATTTTGGTCTTGTTAGTTATTTTTTGGATTATGAAATCTAGTTTTCTACTATTTGCTCATTCTTGGAGTTCACTGTATTTCTTAGTTCAAACACAACACTGGAGAATATTATATTTTATAAATTTTTATTAGACAAATCGTTAAGGTTGTGGAAGGCATCG

Coding sequence (CDS)

GCACGGTCGGTTCATGCATTTGTGGAGGCCGGCGGGAAAGGCGAGAGGTGGGTTGAAGGAAATGGAGGGAAAATTCAAGTCTCTTTCATTGGTGGGAGCTGGAGCTCTCTTCGGTTCTGTTTCTACCTTCTTCATCCTCAAGCTCCTTCACAGGCAAGTTTAGCGGTAGAATCGCTTCTTTCTTATGCCATCGCGAACCAAGCTGAGACGAAGGCAACCAAGCTGCGTGGTAATGGACATATGGTTGAGACTACTATAAAGGGCAGTCCTGTAGTTGGGTGCACCAATCGTGGAATTTTTGATGTAGATCTTCTAACTGATGAAATTGTTTCCGAACAACTAACGAGGAACATTCAGTTCTTTGGCCTTAGCTCACAGAAGAATGTGACTGCATCCTATGTTGTCGTAATTGGTCTTGGTGGCGTTGGGAGTCATGCTGCTATGATGCTTCTTCGATCAGGGGTTGGCAGGCTTCTCCTTGTTGACTTTGACCAGGTGTCACTTTCTTCTCTAAATCGACATGCCGTTGCAACAAGAGCAGATGTTGGTGTCCCAAAAGCTCAGTGCCTCAAGGAGCACTTTCTGTCCATCTTTCCAGAGTGTCAAGTAGAAGCAAAAGTGCTATTATATGATGCAACATCTGAAGAAGAAATTCTTTCTGGGAAACCTGATTTTGTTCTGGACTGCATTGACAATATTGATACAAAGGTATCCCTTCTTGCTGCATGTGTACGTAGGGGATTGAAAGTATTATCAGCAACAGGAGCTGGAGCTCGAGCTGACCCAACAAGAATTCGTGTGGCTGATTTAAGAGAGTCAACAAATGACCCATTATCTCGAGCTGTGAGGCATCGTTTGCGGAAAGGTTATGGCATTGAAGGGGGCATTCCTGTTGTATTTTCTTTAGAAAAACCCAAAGCAAAGCTGCTTCCATTCCAAGGACCAAGCGGAGAAGCTGAAAATCCTTCAGATTATCAGATAGTTCCTGGGTTCAGAGTTCGCATCATACCTGTTCTAGGTACCATCCCTGCAATTTTTGGACAGGTAATGGCCTCGTATGTTGTGACACAACTAGCAGGGCTTCAAGTGGAAACAGAACCTATCGTTAATTTGGACACAGATCATTATAGGTTGCTTCATCAGCGACTCATTGAGCATGAAGAATCATTATATGGCACTGCCATGCAAGTCCAGGTGGATGTTGAAGAAGTGATGTTTGTTGCAAAAGAGCTCTGGCATGGAAGAAGCGCAAGAGACCAGTCTGCGAAAGATGTTGGACGAGGAATGTGGCGAGCTATTAATGAATTAATGCTTGTGAGGTGGGATCGAGCAAAACCAGCATCCGTGGCTAACTTAATTCTTTTGAAATTTAAAGAGGCTGATGAACATGAGTCATCGACCCTAGATGACATAAAGGAAAAAGAACCTGAATTCTTTAGGAGGGTAACTGCTATTTTGAAGCGAGCTGAGATTGAATTTTCTTTATGA

Protein sequence

ARSVHAFVEAGGKGERWVEGNGGKIQVSFIGGSWSSLRFCFYLLHPQAPSQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLDDIKEKEPEFFRRVTAILKRAEIEFSL

Homology

[Close]

BLAST of Lsi05G019380 vs. ExPASy Swiss-Prot
Match: O13861 (tRNA threonylcarbamoyladenosine dehydratase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC1A6.10 PE=3 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 7.9e-67
Identity = 150/397 (37.78%), Postives = 221/397 (55.67%), Query Frame = 0


Query: 79  GHMVETTIKGSPV----VGCTNRGIFDVDLLTDEIVSEQLTRNIQFFGLSSQKNVTASYV 138
           G  ++ +  G P+     G  + GI       + ++ EQL RN  FFG    + +  S+V
Sbjct: 70  GKSIQLSSSGVPIEIYDAGEEDEGISKGVPYDENLIREQLARNYAFFGEDGMERLRNSFV 129

Query: 139 VVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLKEHF 198
           +V+G GGVGS    ML RSGV ++ +VDFDQVSLSSLNRH++AT  DVG PK   +K+  
Sbjct: 130 IVVGCGGVGSWVINMLARSGVQKIRIVDFDQVSLSSLNRHSIATLQDVGTPKTLAIKKAI 189

Query: 199 LSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVLSAT 258
               P  +V+A+  L++  S +++LSG PDFV+D IDNI TKV LL+ C    L V+++T
Sbjct: 190 KKFAPWIEVDARNALFNPDSADDLLSGNPDFVIDAIDNIQTKVDLLSYCYNHKLPVIAST 249

Query: 259 GAGARADPTRIRVADLRESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLEKP---KAKLLP 318
           G+  ++DPTR+ +AD+  ++ DPLSRA R RLR   GI  GIPVVFS EKP   KA LLP
Sbjct: 250 GSACKSDPTRVNIADISATSEDPLSRATRRRLRL-LGIMEGIPVVFSTEKPDPRKASLLP 309

Query: 319 FQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQVMASYVVTQLAGLQVETEPIVNL 378
                 E  +  +   +P FR RI+PV+G +P IFG  +A+YV+T +A  +   +PI  +
Sbjct: 310 LSEEEFEKGDVDELSALPEFRARILPVIGPMPGIFGLTIATYVLTSIA--KYPMDPISTM 369

Query: 379 DTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWR 438
                     + +  E    G  +    +  E+ ++ +E++ GRSA              
Sbjct: 370 TRPRLYEEAVKRLHAEARKAGVNLDKTFNASEMSYIIEEVYVGRSALPPHES-------- 429

Query: 439 AINELMLVRWDRAKPASVANLILLKFKEADEHESSTL 469
              ++ +VRW+   P    NL+ +   EA  HE + L
Sbjct: 430 --QKVTVVRWNPQLPFDHTNLVAMTRNEARYHEDNVL 453

[Close]

BLAST of Lsi05G019380 vs. ExPASy Swiss-Prot
Match: P36101 (tRNA threonylcarbamoyladenosine dehydratase 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TCD2 PE=1 SV=1)

HSP 1 Score: 241.9 bits (616), Expect = 1.5e-62
Identity = 137/367 (37.33%), Postives = 213/367 (58.04%), Query Frame = 0


Query: 107 DEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQV 166
           ++ + + L  N++F G  + + ++  YVVV+G GGVGS     L+RSG  ++ +VDFDQV
Sbjct: 62  EQFIRQSLKNNVEFLGEDTIEKLSNQYVVVVGAGGVGSWVVNSLVRSGCRKIRVVDFDQV 121

Query: 167 SLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEIL--SGKPD 226
           SLSSLNRH+ A   DVG PK +CL+ H   I P C+++    L+   + E +   +G PD
Sbjct: 122 SLSSLNRHSCAILNDVGTPKVECLRRHMREIAPWCEIDPINELWTLQNGERLTLGNGTPD 181

Query: 227 FVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRH 286
           F++DCIDNIDTKV LL      G+KV+S+ GA A++DPT++ V DL  +  DPL+R VR 
Sbjct: 182 FIVDCIDNIDTKVDLLEFAYNHGIKVISSMGASAKSDPTKLNVGDLATTEEDPLARVVRR 241

Query: 287 RLRKGYGIEGGIPVVFSLEKP---KAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGT 346
           +L+K  GI  GIPVVFS EKP   KAKLLP      E     +   +  FRVRI+PVLGT
Sbjct: 242 KLKK-RGILSGIPVVFSAEKPDPKKAKLLPLPDEEYERGKVDELSALKDFRVRILPVLGT 301

Query: 347 IPAIFGQVMASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDV 406
           +P++FG  + +++++ ++   +E     N     Y  ++Q L      +   + ++ + +
Sbjct: 302 MPSLFGLTITTWILSNISDKPLEPVEGKN-RIKVYDGIYQSLAGQMSRVGIPSQRIPLAL 361

Query: 407 EEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEAD 466
           ++V ++ +E++ G+S     +             L L +WD +KP S+ N+++L   E  
Sbjct: 362 KDVSYLVEEVFKGKSPISGIS-----------TRLTLTKWDPSKPISLQNVVVLTKNEQK 415

Query: 467 EHESSTL 469
            HE   L
Sbjct: 422 VHEDRVL 415

[Close]

BLAST of Lsi05G019380 vs. ExPASy Swiss-Prot
Match: P38756 (tRNA threonylcarbamoyladenosine dehydratase 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TCD1 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.2e-46
Identity = 117/393 (29.77%), Postives = 204/393 (51.91%), Query Frame = 0


Query: 107 DEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQV 166
           D +  EQL RN  F G    + +   Y+V++G G VGS    ML+RSG  +++++D + +
Sbjct: 50  DHLFREQLARNYAFLGEEGMRKIKEQYIVIVGAGEVGSWVCTMLIRSGCQKIMIIDPENI 109

Query: 167 SLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEIL---SGKP 226
           S+ SLN H  A  +D+G PK QCLKEH   I P  +++A+   +   +  +++      P
Sbjct: 110 SIDSLNTHCCAVLSDIGKPKVQCLKEHLSKIAPWSEIKARAKAWTKENSHDLIFADGESP 169

Query: 227 DFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVR 286
            F++DC+DN+++KV LL       + V+S+ G   ++DPTR+ + D+  +  DP+SR VR
Sbjct: 170 TFIVDCLDNLESKVDLLEYAHHNKIDVISSMGVATKSDPTRVSINDISMTEFDPISRCVR 229

Query: 287 HRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIP 346
            +LRK  GI  GI VVFS E    +      P  + E+ +    V    +R +P LGT+P
Sbjct: 230 RKLRK-RGIATGISVVFSNEMLDPRRDDILSPI-DCEHRA-INAVRDEALRHLPELGTMP 289

Query: 347 AIFGQVMASYVVTQLAGLQVETEPIVN--------LDTDHYRLLHQRLIEHEESLYGTAM 406
            IFG  +A++++T+++G  ++   + N        L+T   ++      +   SL G   
Sbjct: 290 GIFGLSIATWILTKVSGYPMKENEVKNRLKFYDSILETFQKQMARLNENKERSSLLG--- 349

Query: 407 QVQVDVEEVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILL 466
                +EEV ++ +E++ G+S     +            +L L +W+  K  S+ N++L+
Sbjct: 350 -----LEEVGYIVEEMFRGKSPISGYS-----------TKLALTKWEANKEISLTNVVLM 409

Query: 467 KFKEADEHESSTLDDIKEKEPEFFRRVTAILKR 489
             +E + HE   L D ++    +   V   ++R
Sbjct: 410 TKEEQEIHEKRILLDGEKLTAVYSEEVLDFIER 420

[Close]

BLAST of Lsi05G019380 vs. ExPASy Swiss-Prot
Match: O32037 (tRNA threonylcarbamoyladenosine dehydratase OS=Bacillus subtilis (strain 168) OX=224308 GN=tcdA PE=3 SV=3)

HSP 1 Score: 142.9 bits (359), Expect = 9.7e-33
Identity = 77/193 (39.90%), Postives = 116/193 (60.10%), Query Frame = 0


Query: 113 QLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLN 172
           Q +RN    G    + +  S V V+G+GGVGS AA  L RSGVGR+LLVD D V ++++N
Sbjct: 4   QFSRNELAIGKEGLETLKNSTVAVLGVGGVGSFAAEALARSGVGRILLVDKDDVDITNVN 63

Query: 173 RHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDN 232
           R   A  + VG PK   +K     I PEC+V A  + Y   + E+      D+V+D  D 
Sbjct: 64  RQLHALLSTVGQPKVDLMKARIADINPECEVIALKMFYTEETYEQFFDYGLDYVIDASDT 123

Query: 233 IDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKGYGI 292
           I  K+ L+  C++R + ++S+ GA  + DPTR ++AD+ ++  DP+++ VR +LRK  GI
Sbjct: 124 ICYKIHLMKECLKRDIPLISSMGAANKTDPTRFQIADISKTHTDPIAKVVRTKLRK-EGI 183

Query: 293 EGGIPVVFSLEKP 306
           + G+ V+FS E P
Sbjct: 184 KKGVQVIFSDESP 195

[Close]

BLAST of Lsi05G019380 vs. ExPASy Swiss-Prot
Match: Q57097 (tRNA threonylcarbamoyladenosine dehydratase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=tcdA PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 1.8e-26
Identity = 64/172 (37.21%), Postives = 97/172 (56.40%), Query Frame = 0


Query: 132 SYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRADVGVPKAQCLK 191
           +++ VIG+GGVGS     L RSG+G L L+D D + ++++NR   A    +G  K + + 
Sbjct: 34  AHICVIGIGGVGSWVVEALARSGIGELTLIDMDDICVTNINRQLPAMSGTIGKLKTEVMS 93

Query: 192 EHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLLAACVRRGLKVL 251
           E    I PEC V          ++ + L+   D+V+D IDN+ TK SL+A C R  + V+
Sbjct: 94  ERVKLINPECTVNIIDDFISPENQSDYLNRGYDYVIDAIDNVKTKASLIAYCKRNKINVI 153

Query: 252 SATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKGYGIEGGIPVVFSLE 304
           +  GAG + DPT+I++ADL ++  DPL   VR  LRK Y         FS++
Sbjct: 154 TIGGAGGQTDPTQIQIADLSKTIQDPLLAKVRSVLRKDYNFSQNPKRKFSID 205

[Close]

BLAST of Lsi05G019380 vs. ExPASy TrEMBL
Match: A0A5D3D3C0 (tRNA threonylcarbamoyladenosine dehydratase isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003730 PE=4 SV=1)

HSP 1 Score: 821.2 bits (2120), Expect = 2.3e-234
Identity = 421/446 (94.39%), Postives = 433/446 (97.09%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  LL   IA+QAE+KATKLRGNG MVETT+KGSPVVGCTNRG+ DVDLLTDEI
Sbjct: 19  SVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPVVGCTNRGLSDVDLLTDEI 78

Query: 110 VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 169
           VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS
Sbjct: 79  VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 138

Query: 170 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 229
           SLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VEAKVLLYDATSEEEILSGKPDFVLDC
Sbjct: 139 SLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVEAKVLLYDATSEEEILSGKPDFVLDC 198

Query: 230 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 289
           IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG
Sbjct: 199 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 258

Query: 290 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 349
           YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV
Sbjct: 259 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 318

Query: 350 MASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 409
           MASYVVTQLAGLQVETEP+VNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK
Sbjct: 319 MASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 378

Query: 410 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 469
           ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASV+NLILLKFKEADEHESSTLD
Sbjct: 379 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVSNLILLKFKEADEHESSTLD 438

Query: 470 DIKEKEPEFFRRVTAILKRAEIEFSL 496
           DIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 439 DIKENEPEFFGRVTATLKRAEVEFSL 464

[Close]

BLAST of Lsi05G019380 vs. ExPASy TrEMBL
Match: A0A1S3AWE8 (tRNA threonylcarbamoyladenosine dehydratase isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483373 PE=4 SV=1)

HSP 1 Score: 821.2 bits (2120), Expect = 2.3e-234
Identity = 421/446 (94.39%), Postives = 433/446 (97.09%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  LL   IA+QAE+KATKLRGNG MVETT+KGSPVVGCTNRG+ DVDLLTDEI
Sbjct: 19  SVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPVVGCTNRGLSDVDLLTDEI 78

Query: 110 VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 169
           VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS
Sbjct: 79  VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 138

Query: 170 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 229
           SLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VEAKVLLYDATSEEEILSGKPDFVLDC
Sbjct: 139 SLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVEAKVLLYDATSEEEILSGKPDFVLDC 198

Query: 230 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 289
           IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG
Sbjct: 199 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 258

Query: 290 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 349
           YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV
Sbjct: 259 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 318

Query: 350 MASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 409
           MASYVVTQLAGLQVETEP+VNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK
Sbjct: 319 MASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 378

Query: 410 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 469
           ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASV+NLILLKFKEADEHESSTLD
Sbjct: 379 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVSNLILLKFKEADEHESSTLD 438

Query: 470 DIKEKEPEFFRRVTAILKRAEIEFSL 496
           DIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 439 DIKENEPEFFGRVTATLKRAEVEFSL 464

[Close]

BLAST of Lsi05G019380 vs. ExPASy TrEMBL
Match: A0A1S3AWF9 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483373 PE=4 SV=1)

HSP 1 Score: 814.3 bits (2102), Expect = 2.8e-232
Identity = 421/453 (92.94%), Postives = 433/453 (95.58%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  LL   IA+QAE+KATKLRGNG MVETT+KGSPVVGCTNRG+ DVDLLTDEI
Sbjct: 19  SVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPVVGCTNRGLSDVDLLTDEI 78

Query: 110 VSEQLT-------RNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVD 169
           VSEQLT       RNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVD
Sbjct: 79  VSEQLTSYVPVVLRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVD 138

Query: 170 FDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGK 229
           FDQVSLSSLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VEAKVLLYDATSEEEILSGK
Sbjct: 139 FDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVEAKVLLYDATSEEEILSGK 198

Query: 230 PDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAV 289
           PDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAV
Sbjct: 199 PDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAV 258

Query: 290 RHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTI 349
           RHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTI
Sbjct: 259 RHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTI 318

Query: 350 PAIFGQVMASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVE 409
           PAIFGQVMASYVVTQLAGLQVETEP+VNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVE
Sbjct: 319 PAIFGQVMASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVE 378

Query: 410 EVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADE 469
           EVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASV+NLILLKFKEADE
Sbjct: 379 EVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVSNLILLKFKEADE 438

Query: 470 HESSTLDDIKEKEPEFFRRVTAILKRAEIEFSL 496
           HESSTLDDIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 439 HESSTLDDIKENEPEFFGRVTATLKRAEVEFSL 471

[Close]

BLAST of Lsi05G019380 vs. ExPASy TrEMBL
Match: A0A6J1F2I9 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111439179 PE=4 SV=1)

HSP 1 Score: 807.7 bits (2085), Expect = 2.6e-230
Identity = 412/444 (92.79%), Postives = 426/444 (95.95%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  L++  IANQAETK TKLRGNGHMVETT+KGSP V CT+ GI DVDLLTDEI
Sbjct: 19  SVSTFFILKLINRRIANQAETKETKLRGNGHMVETTVKGSPAVACTSHGISDVDLLTDEI 78

Query: 110 VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 169
           VSEQLTRNIQFFGLS+QKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS
Sbjct: 79  VSEQLTRNIQFFGLSAQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 138

Query: 170 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 229
           SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC
Sbjct: 139 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 198

Query: 230 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 289
           IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG
Sbjct: 199 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 258

Query: 290 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 349
           YGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV
Sbjct: 259 YGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 318

Query: 350 MASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 409
           MASYVVTQLAGLQVETEP+VNLD +HYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK
Sbjct: 319 MASYVVTQLAGLQVETEPVVNLDIEHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 378

Query: 410 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 469
           ELWHGRSARDQ AKDVGRGMWRAINELMLVRWDRAKPASVANLILL+FKEADEHES+TLD
Sbjct: 379 ELWHGRSARDQFAKDVGRGMWRAINELMLVRWDRAKPASVANLILLRFKEADEHESATLD 438

Query: 470 DIKEKEPEFFRRVTAILKRAEIEF 494
           DIKE EPEFF RVT +LKRAE+EF
Sbjct: 439 DIKENEPEFFTRVTGVLKRAEMEF 462

[Close]

BLAST of Lsi05G019380 vs. ExPASy TrEMBL
Match: A0A6J1I7L9 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111470738 PE=4 SV=1)

HSP 1 Score: 807.4 bits (2084), Expect = 3.4e-230
Identity = 412/446 (92.38%), Postives = 428/446 (95.96%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  L++  +ANQAETKATKLRGNGHMVETT+KGSPVV CT+  I DVDLLTDEI
Sbjct: 19  SVSTFFILKLINRRLANQAETKATKLRGNGHMVETTVKGSPVVACTSHEISDVDLLTDEI 78

Query: 110 VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 169
           VSEQLTRNIQFFGLS+QKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS
Sbjct: 79  VSEQLTRNIQFFGLSAQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 138

Query: 170 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 229
           SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC
Sbjct: 139 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 198

Query: 230 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 289
           IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG
Sbjct: 199 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 258

Query: 290 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 349
           YGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV
Sbjct: 259 YGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 318

Query: 350 MASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 409
           MASYVVTQ+AGLQVETEP+VNLD +HYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK
Sbjct: 319 MASYVVTQIAGLQVETEPVVNLDIEHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 378

Query: 410 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 469
           ELWHGRSARDQ AKDVGRGMWRAINELMLVRWDRAKPASVANLILL+FKEADEHES+TLD
Sbjct: 379 ELWHGRSARDQFAKDVGRGMWRAINELMLVRWDRAKPASVANLILLRFKEADEHESATLD 438

Query: 470 DIKEKEPEFFRRVTAILKRAEIEFSL 496
           DIKE EPEFF RVT +LKRAE+EF L
Sbjct: 439 DIKENEPEFFTRVTGVLKRAEMEFFL 464

[Close]

BLAST of Lsi05G019380 vs. NCBI nr
Match: XP_038893153.1 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Benincasa hispida])

HSP 1 Score: 829.7 bits (2142), Expect = 1.3e-236
Identity = 427/446 (95.74%), Postives = 434/446 (97.31%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  LL   IANQAETKATKL GNGHMVETT+K SPVVGCTNRGIFDVDLLTDEI
Sbjct: 19  SVSTFFILRLLHRRIANQAETKATKLCGNGHMVETTVKDSPVVGCTNRGIFDVDLLTDEI 78

Query: 110 VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 169
           VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS
Sbjct: 79  VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 138

Query: 170 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 229
           SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDA SEEEILSGKPDFVLDC
Sbjct: 139 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDAASEEEILSGKPDFVLDC 198

Query: 230 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 289
           IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG
Sbjct: 199 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 258

Query: 290 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 349
           YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV
Sbjct: 259 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 318

Query: 350 MASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 409
           MASYVVTQLAGLQVETEP+VNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK
Sbjct: 319 MASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 378

Query: 410 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 469
           ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD
Sbjct: 379 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 438

Query: 470 DIKEKEPEFFRRVTAILKRAEIEFSL 496
           DIKEKEPEFFR+V AILKRAE+EFSL
Sbjct: 439 DIKEKEPEFFRKVNAILKRAEMEFSL 464

[Close]

BLAST of Lsi05G019380 vs. NCBI nr
Match: XP_008438196.1 (PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo] >KAA0049057.1 tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo var. makuwa] >TYK17506.1 tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 821.2 bits (2120), Expect = 4.7e-234
Identity = 421/446 (94.39%), Postives = 433/446 (97.09%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  LL   IA+QAE+KATKLRGNG MVETT+KGSPVVGCTNRG+ DVDLLTDEI
Sbjct: 19  SVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPVVGCTNRGLSDVDLLTDEI 78

Query: 110 VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 169
           VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS
Sbjct: 79  VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 138

Query: 170 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 229
           SLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VEAKVLLYDATSEEEILSGKPDFVLDC
Sbjct: 139 SLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVEAKVLLYDATSEEEILSGKPDFVLDC 198

Query: 230 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 289
           IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG
Sbjct: 199 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 258

Query: 290 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 349
           YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV
Sbjct: 259 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 318

Query: 350 MASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 409
           MASYVVTQLAGLQVETEP+VNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK
Sbjct: 319 MASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 378

Query: 410 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 469
           ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASV+NLILLKFKEADEHESSTLD
Sbjct: 379 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVSNLILLKFKEADEHESSTLD 438

Query: 470 DIKEKEPEFFRRVTAILKRAEIEFSL 496
           DIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 439 DIKENEPEFFGRVTATLKRAEVEFSL 464

[Close]

BLAST of Lsi05G019380 vs. NCBI nr
Match: XP_008438195.1 (PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucumis melo])

HSP 1 Score: 814.3 bits (2102), Expect = 5.7e-232
Identity = 421/453 (92.94%), Postives = 433/453 (95.58%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  LL   IA+QAE+KATKLRGNG MVETT+KGSPVVGCTNRG+ DVDLLTDEI
Sbjct: 19  SVSTFFILKLLHRQIADQAESKATKLRGNGDMVETTVKGSPVVGCTNRGLSDVDLLTDEI 78

Query: 110 VSEQLT-------RNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVD 169
           VSEQLT       RNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVD
Sbjct: 79  VSEQLTSYVPVVLRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVD 138

Query: 170 FDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGK 229
           FDQVSLSSLNRHAVATRADVG+PKAQCLKEHFLSIFPEC+VEAKVLLYDATSEEEILSGK
Sbjct: 139 FDQVSLSSLNRHAVATRADVGIPKAQCLKEHFLSIFPECRVEAKVLLYDATSEEEILSGK 198

Query: 230 PDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAV 289
           PDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAV
Sbjct: 199 PDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAV 258

Query: 290 RHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTI 349
           RHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTI
Sbjct: 259 RHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTI 318

Query: 350 PAIFGQVMASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVE 409
           PAIFGQVMASYVVTQLAGLQVETEP+VNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVE
Sbjct: 319 PAIFGQVMASYVVTQLAGLQVETEPVVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVE 378

Query: 410 EVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADE 469
           EVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASV+NLILLKFKEADE
Sbjct: 379 EVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVSNLILLKFKEADE 438

Query: 470 HESSTLDDIKEKEPEFFRRVTAILKRAEIEFSL 496
           HESSTLDDIKE EPEFF RVTA LKRAE+EFSL
Sbjct: 439 HESSTLDDIKENEPEFFGRVTATLKRAEVEFSL 471

[Close]

BLAST of Lsi05G019380 vs. NCBI nr
Match: XP_023538843.1 (tRNA threonylcarbamoyladenosine dehydratase [Cucurbita pepo subsp. pepo])

HSP 1 Score: 812.4 bits (2097), Expect = 2.2e-231
Identity = 414/446 (92.83%), Postives = 430/446 (96.41%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  L++  +ANQAETKATKLRGNGHMVETT+KGSPVV CT+ GI DVDLLTDEI
Sbjct: 19  SVSTFFILKLINRRLANQAETKATKLRGNGHMVETTVKGSPVVACTSHGISDVDLLTDEI 78

Query: 110 VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 169
           VSEQLTRNIQFFGLS+QKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS
Sbjct: 79  VSEQLTRNIQFFGLSAQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 138

Query: 170 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 229
           SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC
Sbjct: 139 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 198

Query: 230 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 289
           IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG
Sbjct: 199 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 258

Query: 290 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 349
           YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV
Sbjct: 259 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 318

Query: 350 MASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 409
           MASYVVTQLAGLQVETEP+VNLD +HYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK
Sbjct: 319 MASYVVTQLAGLQVETEPVVNLDIEHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 378

Query: 410 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 469
           ELWHGRSARDQ AKDVGRGMWRAINELMLVRWDRAKPASVANL+LL+FKEADEHES+TLD
Sbjct: 379 ELWHGRSARDQFAKDVGRGMWRAINELMLVRWDRAKPASVANLVLLRFKEADEHESATLD 438

Query: 470 DIKEKEPEFFRRVTAILKRAEIEFSL 496
           DIKE EPEFF RVT +LKRAE+EF L
Sbjct: 439 DIKENEPEFFTRVTGVLKRAEMEFFL 464

[Close]

BLAST of Lsi05G019380 vs. NCBI nr
Match: XP_022932713.1 (tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucurbita moschata])

HSP 1 Score: 807.7 bits (2085), Expect = 5.4e-230
Identity = 412/444 (92.79%), Postives = 426/444 (95.95%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQAETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDEI 109
           S ++  +  L++  IANQAETK TKLRGNGHMVETT+KGSP V CT+ GI DVDLLTDEI
Sbjct: 19  SVSTFFILKLINRRIANQAETKETKLRGNGHMVETTVKGSPAVACTSHGISDVDLLTDEI 78

Query: 110 VSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 169
           VSEQLTRNIQFFGLS+QKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS
Sbjct: 79  VSEQLTRNIQFFGLSAQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLS 138

Query: 170 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 229
           SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC
Sbjct: 139 SLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDC 198

Query: 230 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 289
           IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG
Sbjct: 199 IDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRKG 258

Query: 290 YGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 349
           YGIEGGIPVVFSLEKPKAKLLPFQGP GEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV
Sbjct: 259 YGIEGGIPVVFSLEKPKAKLLPFQGPGGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQV 318

Query: 350 MASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 409
           MASYVVTQLAGLQVETEP+VNLD +HYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK
Sbjct: 319 MASYVVTQLAGLQVETEPVVNLDIEHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVAK 378

Query: 410 ELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTLD 469
           ELWHGRSARDQ AKDVGRGMWRAINELMLVRWDRAKPASVANLILL+FKEADEHES+TLD
Sbjct: 379 ELWHGRSARDQFAKDVGRGMWRAINELMLVRWDRAKPASVANLILLRFKEADEHESATLD 438

Query: 470 DIKEKEPEFFRRVTAILKRAEIEF 494
           DIKE EPEFF RVT +LKRAE+EF
Sbjct: 439 DIKENEPEFFTRVTGVLKRAEMEF 462

[Close]

BLAST of Lsi05G019380 vs. TAIR 10
Match: AT5G37530.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 660.6 bits (1703), Expect = 9.9e-190
Identity = 336/445 (75.51%), Postives = 385/445 (86.52%), Query Frame = 0


Query: 50  SQASLAVESLLSYAIANQA-ETKATKLRGNGHMVETTIKGSPVVGCTNRGIFDVDLLTDE 109
           S +++A+  LLS +   Q  E   T   GNG  +E+  +   V           DLL DE
Sbjct: 19  SISTVALLKLLSRSSLKQLNENPETNFLGNG--IESETRPDTVAN-------GQDLLKDE 78

Query: 110 IVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSL 169
           IVSE LTRNIQFFGL SQ  VT SYVVVIGLGGVGSHAA MLLRSGVG+LLLVDFDQVSL
Sbjct: 79  IVSEHLTRNIQFFGLESQHKVTGSYVVVIGLGGVGSHAASMLLRSGVGKLLLVDFDQVSL 138

Query: 170 SSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLD 229
           SSLNRHAVATRADVG+PKA CLK+HF SIFPEC +EAKV+LYD++SEEEILSGKPDFVLD
Sbjct: 139 SSLNRHAVATRADVGIPKAMCLKKHFSSIFPECHIEAKVMLYDSSSEEEILSGKPDFVLD 198

Query: 230 CIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAVRHRLRK 289
           CIDNIDTKV LLAACV+RGLKVLSATGAGARADPTRIRVAD+REST DPLSR+VRHRLR+
Sbjct: 199 CIDNIDTKVGLLAACVKRGLKVLSATGAGARADPTRIRVADIRESTIDPLSRSVRHRLRR 258

Query: 290 GYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTIPAIFGQ 349
            +GIEGGIPVVFSLEKPKAKLLPF+G +GE ENP DYQ+VPGFRVRIIPVLGTIPAIFGQ
Sbjct: 259 KHGIEGGIPVVFSLEKPKAKLLPFEGTNGEDENPLDYQVVPGFRVRIIPVLGTIPAIFGQ 318

Query: 350 VMASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVEEVMFVA 409
           +MASYV+TQLAG+QV+ EPIVNLD DHYRLLHQRLIEHEE++YGT+ +V+VDVEEVM++ 
Sbjct: 319 IMASYVITQLAGVQVQMEPIVNLDLDHYRLLHQRLIEHEETVYGTSAEVEVDVEEVMYIV 378

Query: 410 KELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADEHESSTL 469
           KELWHGRSARD++AKDVGRGMWRA+NELMLVRWD  KPA+V+NL+LLKFKEADEHE+ TL
Sbjct: 379 KELWHGRSARDETAKDVGRGMWRAMNELMLVRWDAKKPATVSNLVLLKFKEADEHETKTL 438

Query: 470 DDIKEKEPEFFRRVTAILKRAEIEF 494
           +++KE E EFF RV+ +LK+AE++F
Sbjct: 439 EEVKESETEFFERVSCVLKKAELDF 454

[Close]

BLAST of Lsi05G019380 vs. TAIR 10
Match: AT5G37530.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 659.8 bits (1701), Expect = 1.7e-189
Identity = 323/391 (82.61%), Postives = 364/391 (93.09%), Query Frame = 0


Query: 103 DLLTDEIVSEQLTRNIQFFGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVD 162
           DLL DEIVSE LTRNIQFFGL SQ  VT SYVVVIGLGGVGSHAA MLLRSGVG+LLLVD
Sbjct: 65  DLLKDEIVSEHLTRNIQFFGLESQHKVTGSYVVVIGLGGVGSHAASMLLRSGVGKLLLVD 124

Query: 163 FDQVSLSSLNRHAVATRADVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGK 222
           FDQVSLSSLNRHAVATRADVG+PKA CLK+HF SIFPEC +EAKV+LYD++SEEEILSGK
Sbjct: 125 FDQVSLSSLNRHAVATRADVGIPKAMCLKKHFSSIFPECHIEAKVMLYDSSSEEEILSGK 184

Query: 223 PDFVLDCIDNIDTKVSLLAACVRRGLKVLSATGAGARADPTRIRVADLRESTNDPLSRAV 282
           PDFVLDCIDNIDTKV LLAACV+RGLKVLSATGAGARADPTRIRVAD+REST DPLSR+V
Sbjct: 185 PDFVLDCIDNIDTKVGLLAACVKRGLKVLSATGAGARADPTRIRVADIRESTIDPLSRSV 244

Query: 283 RHRLRKGYGIEGGIPVVFSLEKPKAKLLPFQGPSGEAENPSDYQIVPGFRVRIIPVLGTI 342
           RHRLR+ +GIEGGIPVVFSLEKPKAKLLPF+G +GE ENP DYQ+VPGFRVRIIPVLGTI
Sbjct: 245 RHRLRRKHGIEGGIPVVFSLEKPKAKLLPFEGTNGEDENPLDYQVVPGFRVRIIPVLGTI 304

Query: 343 PAIFGQVMASYVVTQLAGLQVETEPIVNLDTDHYRLLHQRLIEHEESLYGTAMQVQVDVE 402
           PAIFGQ+MASYV+TQLAG+QV+ EPIVNLD DHYRLLHQRLIEHEE++YGT+ +V+VDVE
Sbjct: 305 PAIFGQIMASYVITQLAGVQVQMEPIVNLDLDHYRLLHQRLIEHEETVYGTSAEVEVDVE 364

Query: 403 EVMFVAKELWHGRSARDQSAKDVGRGMWRAINELMLVRWDRAKPASVANLILLKFKEADE 462
           EVM++ KELWHGRSARD++AKDVGRGMWRA+NELMLVRWD  KPA+V+NL+LLKFKEADE
Sbjct: 365 EVMYIVKELWHGRSARDETAKDVGRGMWRAMNELMLVRWDAKKPATVSNLVLLKFKEADE 424

Query: 463 HESSTLDDIKEKEPEFFRRVTAILKRAEIEF 494
           HE+ TL+++KE E EFF RV+ +LK+AE++F
Sbjct: 425 HETKTLEEVKESETEFFERVSCVLKKAELDF 455

[Close]

BLAST of Lsi05G019380 vs. TAIR 10
Match: AT5G55130.1 (co-factor for nitrate, reductase and xanthine dehydrogenase 5 )

HSP 1 Score: 70.9 bits (172), Expect = 3.3e-12
Identity = 46/143 (32.17%), Postives = 73/143 (51.05%), Query Frame = 0


Query: 121 FGLSSQKNVTASYVVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRA 180
           F +  Q N+  S V+VIG GG+GS A + L   GVG+L ++D D V L++++R  + T A
Sbjct: 81  FAVEGQSNLLKSSVLVIGAGGLGSPALLYLAACGVGQLGIIDHDVVELNNMHRQIIHTEA 140

Query: 181 DVGVPKAQCLKEHFLSIFPECQVEAKVLLYDATSEEEILSGKPDFVLDCIDNIDTKVSLL 240
            +G PK +       SI    +V+  V     ++  EILS + D ++D  DN  ++  + 
Sbjct: 141 FIGHPKVKSAAAACRSINSTIKVDEYVEALRTSNALEILS-QYDIIVDATDNPPSRYMIS 200

Query: 241 AACVRRGLKVLSATGAGARADPT 264
             CV  G  ++S    G     T
Sbjct: 201 DCCVLLGKPLVSGAALGMEGQLT 222

[Close]

BLAST of Lsi05G019380 vs. TAIR 10
Match: AT1G05350.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-09
Identity = 41/126 (32.54%), Postives = 63/126 (50.00%), Query Frame = 0


Query: 134 VVVIGLGGVGSHAAMMLLRSGVGRLLLVDFDQVSLSSLNRHAVATRAD-VGVPKAQCLKE 193
           V ++G+GGVGS AA ML R G+GRLLL D+D V L+++NR  +  R D VG+ K     +
Sbjct: 85  VAIVGIGGVGSVAAEMLTRCGIGRLLLYDYDTVELANMNR--LFFRPDQVGMTKTDAAVQ 144

Query: 194 HFLSIFPECQVEAKVLLYDATSEEEILSGK---------------PDFVLDCIDNIDTKV 244
               I P+  +E+  +        E  +                  D VL C+DN + ++
Sbjct: 145 TLAEINPDVVLESFTMNITTVQGFETFTSSLTNKSFCPSKEGGSGVDLVLSCVDNYEARM 204

The following BLAST results are available for this feature:

BLAST of Lsi05G019380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O13861	7.9e-67	37.78	tRNA threonylcarbamoyladenosine dehydratase OS=Schizosaccharomyces pombe (strain...	[more]
P36101	1.5e-62	37.33	tRNA threonylcarbamoyladenosine dehydratase 2 OS=Saccharomyces cerevisiae (strai...	[more]
P38756	1.2e-46	29.77	tRNA threonylcarbamoyladenosine dehydratase 1 OS=Saccharomyces cerevisiae (strai...	[more]
O32037	9.7e-33	39.90	tRNA threonylcarbamoyladenosine dehydratase OS=Bacillus subtilis (strain 168) OX...	[more]
Q57097	1.8e-26	37.21	tRNA threonylcarbamoyladenosine dehydratase OS=Haemophilus influenzae (strain AT...	[more]

BLAST of Lsi05G019380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3C0	2.3e-234	94.39	tRNA threonylcarbamoyladenosine dehydratase isoform X2 OS=Cucumis melo var. maku...	[more]
A0A1S3AWE8	2.3e-234	94.39	tRNA threonylcarbamoyladenosine dehydratase isoform X2 OS=Cucumis melo OX=3656 G...	[more]
A0A1S3AWF9	2.8e-232	92.94	tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucumis melo OX=3656 G...	[more]
A0A6J1F2I9	2.6e-230	92.79	tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucurbita moschata OX=...	[more]
A0A6J1I7L9	3.4e-230	92.38	tRNA threonylcarbamoyladenosine dehydratase isoform X1 OS=Cucurbita maxima OX=36...	[more]

BLAST of Lsi05G019380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038893153.1	1.3e-236	95.74	tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Benincasa hispida]	[more]
XP_008438196.1	4.7e-234	94.39	PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Cucumis melo]...	[more]
XP_008438195.1	5.7e-232	92.94	PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucumis melo]	[more]
XP_023538843.1	2.2e-231	92.83	tRNA threonylcarbamoyladenosine dehydratase [Cucurbita pepo subsp. pepo]	[more]
XP_022932713.1	5.4e-230	92.79	tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Cucurbita moschata]	[more]

BLAST of Lsi05G019380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G37530.2	9.9e-190	75.51	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G37530.1	1.7e-189	82.61	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT5G55130.1	3.3e-12	32.17	co-factor for nitrate, reductase and xanthine dehydrogenase 5	[more]
AT1G05350.1	1.2e-09	32.54	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000594	THIF-type NAD/FAD binding fold	PFAM	PF00899	ThiF	coord: 115..362 e-value: 7.8E-40 score: 136.8
None	No IPR available	GENE3D	3.40.50.720		coord: 104..366 e-value: 6.7E-68 score: 231.0
None	No IPR available	PANTHER	PTHR43267	TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE	coord: 106..493
None	No IPR available	PANTHER	PTHR43267:SF2	TRNA THREONYLCARBAMOYLADENOSINE DEHYDRATASE 1-RELATED	coord: 106..493
None	No IPR available	CDD	cd00755	YgdL_like	coord: 140..355 e-value: 2.59462E-89 score: 271.015
IPR035985	Ubiquitin-activating enzyme	SUPERFAMILY	69572	Activating enzymes of the ubiquitin-like proteins	coord: 111..387

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G019380.1	Lsi05G019380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008641	ubiquitin-like modifier activating enzyme activity