Lsi05G019230 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G019230
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr05: 26424942 .. 26432087 (-)
RNA-Seq ExpressionLsi05G019230
SyntenyLsi05G019230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGTAAGCACCTAGCTTGGAGAACTCCGGAACCATCTGAGCAGATCCTAGATAAGAATGCAGAATGAAACCAGCAGGAAAAGGTCCCATAGATCTGAAGCAATTGCGATGACAGAACAAGGCGTGCAAACAAATCAACAAAGGACATGACTACGAATGGCAATTTGAAATTAACAATAAACATATAATTATTAGGAAAAGTCATACTTCATTATCTGAAGGAGGTCACCAAAAGCACGAACACAATGGATGGATGCTGGTCTTTCTAAAGACTTAGCAAGCTCTAGCTGTTGCTGAAAGACCTCAATCTGCAGCATCGTTTTATGTCAATAACAGTCTAAATCACTTAAGTATTTAAGAAAATCTGCTTCTTACAATCTGAAAATGTATAATAGCCATACATTTTCTTTCATAACCTCATAAGAAAATGCATAGTAGCCATACCTGATCTGTAAAATTGATCTCCCTTCCTCGTGAACCTTTGTCTAGACCAATCTGAAAAGGTAAACATTAGTCCTAAATTTAGCAACCTACTAAAAGGACACCTCATGTTGAGGCAACAAATTAATCATTAGAGACCTGTGTGCTGTTCTGGATCCTAGCACATAGTTAAAGGTGCAAAGATAATAAAATTAAGAGCGCATAATCCAGGAAGCTCTTTTAATAAAAATTCTAGCACGTACAATATTATCCAAGGTCAAGAACAAGAAGGCACTAGTAACATGCATAAGCAACAAAGGCTCAGTATAACTTCAGAAATCACCCCAAAACATGCTCTTAAGATTATTCCAGGAATAATGCAAGAAGAGCAAAATAATTATTTAGCAGAAAGAATTTATCTGATTCCCAATTTCTTCTGTGTTTTTCCAAATTTTATCTAAAAATGAAATTTAGAACTTTAATCCCTAACCAAATATCCGGAGCACAAATTGGTCTTCAAGGATACATCTTTGGCTACAAATACCTACCTCTCCAACTGCTGCGCTTGGTACTGCTTCAAAAAATTCCTTAAGTTTTTCAAGCCAGCTAGGAGTTCTTTCAAGAACATACCTAAATACAGCAAGATGGATGAATATCATACAATATACTTCATAATGGCAGTAAAAGAGTTGTGTGCGTGTGTACATGGGAAAAGAGGGGGGTGGTGAAAGTGGACAGTGCTTACCAGGGATGAAGACCAAAGGATGGAACTATGCAAGTATGTAATTCACTCAATTGCTTGACCAAATGCCAATCTTTCTATGAACTCGACAGCAGAAAAAAATGAGCAGGAGATGGCACGTATATTAAAAAAACAATATATACAACACAAGATGCATAACTATTGTACCTCAGAGAGTCCATTAACAGCAAAACGAACAACACCAGAATCCACTGCTGCACTAATTAATTGAGGTGCTTTGTCAAATATTCTTGGATCTTGGAGGTGGCAATGTGCATCAAATAGTCTCAATGTCATAGACAATTTAGCCATCCCTGTGTATAAAAGGGGAGGAAGAGTTTCTTCTTGTGTCAGAAAACAGATCCAAGATGAAGAGTTTCTTCTTATGTCAGCAAAAGAATTTCAACTTAAAAGTTCTTGAAAATGTAATTAATCTTTTCAAGAAAATGCATAAGAAAATTTCCTGTTCAGAAAAAACCTACAACTTCAATTACAGTTCAGTGACAGTAGAAGCTTTATAAAAACTTGAAACTCAATGATAGAGAAGACATAAGTAAATCGCACAGCTTGAGCAGTACCTTCAACTCCCATTTGTGGATGATTAACTTAAAATTTAAAAGCCTATGTCCATTTAAATTTAATTCTTCAGAATGTAATTTACCACGTCGAGACAGTGCGTTAGAACATTTCCTTCTCGCGAAAACCTAATACAATAGCTACTGCAGAAGATCTAAGAAATTGTAGAATTTCAGCGAGCGAGAGAGATATACAAAAAATCGCGCAGCGAGTACAGTACCTTCGTTATCCAACTGCGAAGGATTTCAATTCAAAAGCCTATTATATCCATTTCAGTTCAATTCTTCATGGTGTAATTATCATATCGAGAATGTACGTAAGAAGATTTCCTACTCAGAGAAAACCTACGACTTCATTTACTGCAGATGATTTAAGAAACAGGAGAACAAGCGAGCGAGATAGAGAGAGAGACAAAAATCACAAAGCTAACACAGTATCTTCGTCTTCCAATCACGAGAGTAAGAAGAACGAAGCGAAATTAGAGACAAATCGGAAACGCTGTCAATTTCGAAACGATAAGAATATTGAATACGTCAAAGTAGAGATCCAATTCAAGCGTCTGATTAAATAAGCTGTAGAGAAGAAAACTCAAACAAGAACAGTGAAGAAACAAATTGCAATGAACTTCACGCCGATATCGAAAGCCGGAGATACCTCGTCAGCCGATGGAAGCAGAGCTTTGTTTCAGAAACCGCCTTCCGACAATGTATAGCGCGCGCAAAACCTATTGCCGCGCAGTTCACCAGAATAACGAAGTATCAATAGCACGAACCATTTTAAGGGAGCTTATAATTAAATTTCGTTTCGGTGTTCAACTTTCCATATTTCTATTTGAACACCAAAATTTTAAAATATTCAATTTTGTTACCAAATTTCTTTAACTCTCAATAATCCTTATTATGGAATTTTAAAAAATAATTAAACTTTAAAAGTTTAGGCATGTTTAATAATCATTTAATTTTTAATTTTTAAAAATTAAGTCTACAAACACTTCTTTCATCATTAAATTTGTTGTTTTGTTATCTACTTTTTATCTATATTTTAAAAAAAAATGAAAATAGTAAAAACTTGTTTGAGAAATTGAACAATATAGCAAGATTTGAGGTTTGTTCTGGAGATTTGGCAAATTCCACAAAACATTTGTCATGTCCCGTTTTATATGTATTCTCAGTTTGCTTAGTAAAAAATTAATATATATTTACACATATAACAATAATATGAAATTATGAGATTTAACTAATCTATAATTACACACATAATGTGAAGTTATGAAATTTTAACTAATTATAACATAATATTATATATTTATAATTTTTCTCCACCAATATTGGTATGTTTTGATAATTAACTAATATATATCTACATATATAGTATAATAGTAATATCAAGCTATGAGATTTAAGTAATCTATATTTATACCTACAGTATAATTATAATGTGAAGTTACGAGACTTTGACTATTATTTTTAGTAATTTTTTTATTATAACAAAATATTGTATCTTTCATATTTTTCTCCATTAATATTTATTTAAATATATTTTTTGTTATCAAATTTAGTTTTATCTTATTATTTTTATATGAAAAAAAGAACATAGATATTATTTTTAAATATAAAAAATAAGTCAAACTATTTACAAATATAGAAGAATTTTACTTCTTATAAATCACGATAGAATTCTATTGTTGGGACAATAACTTTCAGAAATTATTTGATATTTTGTCTATTTATAATAATTAAAAAAAAAACAAAACAGCGGGTTGAACCAAAAAGAAAAATTGAGAAATCATTTCATGTCTAAGAGGCAAGGGCAAAGAGGTCATTTCGTAAAAACTTATCGAGAAACTGTAAGCACAGAGCTCGCGCGCAGTCGCATCGGACTCGCAGCTCATTCTGTTCTCCCCAGAAATCCCTCGGCGTAGCGACGACGACGATGCTTCTCCAAACTTCGGTTCACCACCGTACCGTCTCTCTCTCCTCCTCAATTTCTTATTCTCGTAAACTTCCGCCTCTAATCCAATCTCAGGCCTTTCACCAGAATGTGAATTATCGGAGGCTTCCTCTCTCTGTAACATGCTCTATCTCCCAAGTCCATAGCTATGGAACTGTTGACTTCGAGCGGAGGCCTATGGTAAAATGGAACGCTATTTACAGGAGGATATCGCTGATGGAGAATCCCGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAAGCTTACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTGAGGAAGTACAGGCGGTTTGATAGGGCTTTGGAGGTAAAGTAGATGATAATTTTTAGGCAATTTTTTTATGTATATATTGGTGTTCATGGATTGTTTCAATTGGGTTGTGAAGTGTGATGTTAATTCAGTCTTTAGTTGAGCTAATGAGGAAGAATCTAATGTCGATTTCTATATAGGATTAACTCATATGCAGCTGCATTGATGAGGTTATAGATGCTTTATGCTTCTTGGCTTGTATTTTTATATGTTTATGACATGTTTGGTAGAGATTTTGAAAGGGTTAAAATCAACCCATATATACATTCAAAAACATGTTTTTTGATTAATCAAAATCAATTTTGATAGAATGAAAATTATGCTTAGGAAATCAAACATTGAAATAATTATTAATGATTAAAGACATGTTTATAAGTGATTTAGAATATGAAAAAAATTTCTTACCATTTCAAAATTACTCTCAAACGCACTCTTAACTAGTTCTTCTGGCAATTATGTAAGCCATTCGAGGTTTGAATCTCTTTTTCACTTTGTAGTTTGGATTGGTTCAGTTGATTCTTTCCATCGAAGTTGATTGTAGTCAGGATTTATTTGTGCAGTGTGAAGTTTACACGACCAGTGATGACCATCTAATTTTTTGTCTCTTGTTTGAAATCCTCACTTTTGGCTGAAGTAATATTGATTTGTGTTCTGATAAATGAAAATATAAGTTCTTTGCTTGCTTTGGTTACATTATGGTAGAAAACAAAAGGCATTTATTAATTTCTTGGGTTGGCTAGTAAAACTAAAGTTTTTTCTTCTTCATCATAGGACATTCTAACTTAGTATGAGTTCAAATATAAACTGTGCTGATGCTTTAGCGTTCGTTTATTGGGAGGCAATGATTTATTTCATTGAAGAATGTTAGATACCATCTTTTGAACATTTCCCTCTAACTCTTTGGATCCCCTATATTGAGAAATTATTTGTTTTCATCATTTAGCTGATCTCGATGCTTATTTATTACTGTCTCTTGAGGCGAGGAGCGTTGTCCAATATTCTTACACGTGTTCATAATTTATCTTTTTTATATATATGAAATACGTCTGATCATTTGAATCTGGTTATACAATACCTTTCCAAACTTCAAAAGGTTGATGTGCAGTAATTCTGAATTTGGTTATTTGTTGCATGCAGTGCATAAATGATATAGCTATATAGATTGTTAAAGCTGTTTCGATTCTAAAATTCCATTTTTTTTTTGTAGATATATGATTGGATGAGCAATAGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCGATTCAATTGGATCTTATTTCGAAAGTCCGTGGTATTAAAAGTGCTGAAGACTACTTCCTTAGGCTGCCAGATAATTTGAAGGACAGGAGAATATATGGGGCTCTTCTGAATGCATATGTGAAAGCAAGACAGAGAGAAAAAGCAGAAAATTTACTTGCAAAAATGAGAACCAAAAGCTACGCGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACCTTAAAGAGTATGAGAAAGTTGAGTCATTAGTGTCAGAAATGACAGAAAAGAGCATTCAACTTGACATATACTCCTACAACATTTGGCTATCATCTTGTGGGTTACAAGGATCAACTGAGAAGATGGAAGAAGTATATGAGCAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCAACAATGTATATTAAGATGGGACTGATAGAAAAAGCTGAAGAATGCTTGAGGAGGGTTGAAAGTAGAATTGTAGGCCGTGATCGAATACCGTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAATGTATCGGGTGTGGAACATTTACAAAACTGTTTTCCCCACGATTCCAAACTTGGGATACCATGCTATAATTTCTGCTCTAATCAGGGTAGGTGATGTTGAAGGTGCTGAAAAAATTTACGAGGAATGGCTAACCGTTAAATCGACCTACGACCCGCGAATTGCTAATCTTTTCATAGGGTGGTATGTTAAGGAAGGGAATGTGAGCAAAGCTGAAAGCTTCTTTGATCACATGGTTGAAGTTGGTGGAAAGCCAAATTCAAGTACGTGGGAGACTCTTGCCGATGGGCATACTAAAGAGGGTCGGGTTTCCGATGCTTTAGCTAGTTGGAAAGAAGCCTTTTCTGCTGAGGGTTCAAAGAGTTGGAGGCCAAAACCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGGAGACATTGCCAGCAAGGAGGTTCTAGTTGGATTGTTGAGGCAGTCCAAATATCTTCAAGACAAAACATATGCATCACTCATCGGTTTGTCAGATGAGACAATTGACAACGATGTAGTTTCGGAAAAAGGTAGTAATATAGACGATGAAATCGATAAAACCGAGTTCGAATCTGATGATTCTGAGATGCTTCTCAAGTTGTGACAGATTCAATGATATTGTCATCCATGGTTTCTGGGATTCGTAATCAGAAGTTTGGCAAAATATGTTATATCTGTGTCGTCCCGAACCCGGAGGGTTGAGAATGCTCATCACTGGTTCACTCTTCAAGTGTAAAGGGTGAAAGCAAATTTGAAATTTTGCTTTGGGGTCTGGGAGTTGGGTAAAATCCAAAGTTATACTCAGCAGAGGTATTTTTATTTATGTTACACTTGGCAGCCATCTCTATCTCTTCTCCAGAATTAGATATTTCTATGAATTTTGAATGTAATTTTCCCAGGTAGAAGTCTTGGATAATACTAAATAGGGTGGAAATTTTGGTGCAATTTTTTAAGCTTGATTTGATAAAGGGAAGGGGCATCCAAGTTTCTTAATATTAGTTCTTGTTCTAATAAGAACTCTACAAAACAACAAATGGTTATTAGTTCTAACAAAAACTCGATACGTCTTGTCTGTTAGTCGTAAAATAATCCTTTTTAGTTCTCTCAAAATTTCAAATTTTAAGTTGTAATTGAGTTGTATGTGTAACTAGTATAGAATGAGAGGGAGAGGGAGATGTAGTGAAGATTAAGTTTAGTTTGTGATATTGTTTATATGATTGTTAATTATTGATATAATTTTCTGAAAAAGATTATG

mRNA sequence

ATGAAAACGAGCGAGAGAGATATACAAAAAATCGCGCAGCGAGTACAGTACCTTCGTTATCCAACTGCGAAGGATTTCAATTCAAAAGCCTATTATATCCATTTCAGTTCAATTCTTCATGGTGTAATTATCATATCGAGAATGTACGTAAGAAGATTTCCTACTCAGAGAAAACCTACGACTTCATTTACTGCAGATGATTTAAGAAACAGGAGAACAAGCGAGCGAGATAGAGAGAGAGACAAAAATCACAAAGCTAACACAGTATCTTCGTCTTCCAATCACGAGAGTAAGAAGAACGAAGCGAAATTAGAGACAAATCGGAAACGCTGTCAATTTCGAAACGATAAGAATATTGAATACGTCAAAGTAGAGATCCAATTCAAGCAGAAGAAAACTCAAACAAGAACAGTGAAGAAACAAATTGCAATGAACTTCACGCCGATATCGAAAGCCGGAGATACCTCGTCAGCCGATGGAAGCAGAGCTTTGTTTCAGAAACCGCCTTCCGACAATGCAAGGGCAAAGAGGTCATTTCGTAAAAACTTATCGAGAAACTGTAAGCACAGAGCTCGCGCGCAGTCGCATCGGACTCGCAGCTCATTCTGTTCTCCCCAGAAATCCCTCGGCGTAGCGACGACGACGATGCTTCTCCAAACTTCGGTTCACCACCGTACCGTCTCTCTCTCCTCCTCAATTTCTTATTCTCGTAAACTTCCGCCTCTAATCCAATCTCAGGCCTTTCACCAGAATGTGAATTATCGGAGGCTTCCTCTCTCTGTAACATGCTCTATCTCCCAAGTCCATAGCTATGGAACTGTTGACTTCGAGCGGAGGCCTATGGTAAAATGGAACGCTATTTACAGGAGGATATCGCTGATGGAGAATCCCGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAAGCTTACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTGAGGAAGTACAGGCGGTTTGATAGGGCTTTGGAGATATATGATTGGATGAGCAATAGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCGATTCAATTGGATCTTATTTCGAAAGTCCGTGGTATTAAAAGTGCTGAAGACTACTTCCTTAGGCTGCCAGATAATTTGAAGGACAGGAGAATATATGGGGCTCTTCTGAATGCATATGTGAAAGCAAGACAGAGAGAAAAAGCAGAAAATTTACTTGCAAAAATGAGAACCAAAAGCTACGCGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACCTTAAAGAGTATGAGAAAGTTGAGTCATTAGTGTCAGAAATGACAGAAAAGAGCATTCAACTTGACATATACTCCTACAACATTTGGCTATCATCTTGTGGGTTACAAGGATCAACTGAGAAGATGGAAGAAGTATATGAGCAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCAACAATGTATATTAAGATGGGACTGATAGAAAAAGCTGAAGAATGCTTGAGGAGGGTTGAAAGTAGAATTGTAGGCCGTGATCGAATACCGTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAATGTATCGGGTGTGGAACATTTACAAAACTGTTTTCCCCACGATTCCAAACTTGGGATACCATGCTATAATTTCTGCTCTAATCAGGGTAGGTGATGTTGAAGGTGCTGAAAAAATTTACGAGGAATGGCTAACCGTTAAATCGACCTACGACCCGCGAATTGCTAATCTTTTCATAGGGTGGTATGTTAAGGAAGGGAATGTGAGCAAAGCTGAAAGCTTCTTTGATCACATGGTTGAAGTTGGTGGAAAGCCAAATTCAAGTACGTGGGAGACTCTTGCCGATGGGCATACTAAAGAGGGTCGGGTTTCCGATGCTTTAGCTAGTTGGAAAGAAGCCTTTTCTGCTGAGGGTTCAAAGAGTTGGAGGCCAAAACCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGGAGACATTGCCAGCAAGGAGGTTCTAGTTGGATTGTTGAGGCAGTCCAAATATCTTCAAGACAAAACATATGCATCACTCATCGGTTTGTCAGATGAGACAATTGACAACGATGTAGTTTCGGAAAAAGGTAGTAATATAGACGATGAAATCGATAAAACCGAGTTCGAATCTGATGATTCTGAGATGCTTCTCAAGTTGTGACAGATTCAATGATATTGTCATCCATGGTTTCTGGGATTCGTAATCAGAAGTTTGGCAAAATATGTTATATCTGTGTCGTCCCGAACCCGGAGGGTTGAGAATGCTCATCACTGGTTCACTCTTCAAGTGTAAAGGGTGAAAGCAAATTTGAAATTTTGCTTTGGGGTCTGGGAGTTGGGTAAAATCCAAAGTTATACTCAGCAGAGGTATTTTTATTTATGTTACACTTGGCAGCCATCTCTATCTCTTCTCCAGAATTAGATATTTCTATGAATTTTGAATGTAATTTTCCCAGGTAGAAGTCTTGGATAATACTAAATAGGGTGGAAATTTTGGTGCAATTTTTTAAGCTTGATTTGATAAAGGGAAGGGGCATCCAAGTTTCTTAATATTAGTTCTTGTTCTAATAAGAACTCTACAAAACAACAAATGGTTATTAGTTCTAACAAAAACTCGATACGTCTTGTCTGTTAGTCGTAAAATAATCCTTTTTAGTTCTCTCAAAATTTCAAATTTTAAGTTGTAATTGAGTTGTATGTGTAACTAGTATAGAATGAGAGGGAGAGGGAGATGTAGTGAAGATTAAGTTTAGTTTGTGATATTGTTTATATGATTGTTAATTATTGATATAATTTTCTGAAAAAGATTATG

Coding sequence (CDS)

ATGAAAACGAGCGAGAGAGATATACAAAAAATCGCGCAGCGAGTACAGTACCTTCGTTATCCAACTGCGAAGGATTTCAATTCAAAAGCCTATTATATCCATTTCAGTTCAATTCTTCATGGTGTAATTATCATATCGAGAATGTACGTAAGAAGATTTCCTACTCAGAGAAAACCTACGACTTCATTTACTGCAGATGATTTAAGAAACAGGAGAACAAGCGAGCGAGATAGAGAGAGAGACAAAAATCACAAAGCTAACACAGTATCTTCGTCTTCCAATCACGAGAGTAAGAAGAACGAAGCGAAATTAGAGACAAATCGGAAACGCTGTCAATTTCGAAACGATAAGAATATTGAATACGTCAAAGTAGAGATCCAATTCAAGCAGAAGAAAACTCAAACAAGAACAGTGAAGAAACAAATTGCAATGAACTTCACGCCGATATCGAAAGCCGGAGATACCTCGTCAGCCGATGGAAGCAGAGCTTTGTTTCAGAAACCGCCTTCCGACAATGCAAGGGCAAAGAGGTCATTTCGTAAAAACTTATCGAGAAACTGTAAGCACAGAGCTCGCGCGCAGTCGCATCGGACTCGCAGCTCATTCTGTTCTCCCCAGAAATCCCTCGGCGTAGCGACGACGACGATGCTTCTCCAAACTTCGGTTCACCACCGTACCGTCTCTCTCTCCTCCTCAATTTCTTATTCTCGTAAACTTCCGCCTCTAATCCAATCTCAGGCCTTTCACCAGAATGTGAATTATCGGAGGCTTCCTCTCTCTGTAACATGCTCTATCTCCCAAGTCCATAGCTATGGAACTGTTGACTTCGAGCGGAGGCCTATGGTAAAATGGAACGCTATTTACAGGAGGATATCGCTGATGGAGAATCCCGAGTTGGGCTCTGCGAGTGTGCTGAACCAGTGGGAGAATGAGGGCAAGAAGCTTACGAAATGGGAGCTTTCTCGGGTCGTTAAGGAGTTGAGGAAGTACAGGCGGTTTGATAGGGCTTTGGAGATATATGATTGGATGAGCAATAGAGAAGAGAGGTTTAGATTAACAACTAGTGATGCTGCGATTCAATTGGATCTTATTTCGAAAGTCCGTGGTATTAAAAGTGCTGAAGACTACTTCCTTAGGCTGCCAGATAATTTGAAGGACAGGAGAATATATGGGGCTCTTCTGAATGCATATGTGAAAGCAAGACAGAGAGAAAAAGCAGAAAATTTACTTGCAAAAATGAGAACCAAAAGCTACGCGACTCACCCGCTTCCGTTCAATGTAATGATGACTCTCTACATGAACCTTAAAGAGTATGAGAAAGTTGAGTCATTAGTGTCAGAAATGACAGAAAAGAGCATTCAACTTGACATATACTCCTACAACATTTGGCTATCATCTTGTGGGTTACAAGGATCAACTGAGAAGATGGAAGAAGTATATGAGCAGATGAAACAAGACAGGACCATCAATGCCAATTGGACTACATTCAGCACAATGGCAACAATGTATATTAAGATGGGACTGATAGAAAAAGCTGAAGAATGCTTGAGGAGGGTTGAAAGTAGAATTGTAGGCCGTGATCGAATACCGTATCATTATCTGATAAGTCTGTATGGTAGTGTTGGTAATAAAGAAGAAATGTATCGGGTGTGGAACATTTACAAAACTGTTTTCCCCACGATTCCAAACTTGGGATACCATGCTATAATTTCTGCTCTAATCAGGGTAGGTGATGTTGAAGGTGCTGAAAAAATTTACGAGGAATGGCTAACCGTTAAATCGACCTACGACCCGCGAATTGCTAATCTTTTCATAGGGTGGTATGTTAAGGAAGGGAATGTGAGCAAAGCTGAAAGCTTCTTTGATCACATGGTTGAAGTTGGTGGAAAGCCAAATTCAAGTACGTGGGAGACTCTTGCCGATGGGCATACTAAAGAGGGTCGGGTTTCCGATGCTTTAGCTAGTTGGAAAGAAGCCTTTTCTGCTGAGGGTTCAAAGAGTTGGAGGCCAAAACCCTATAATGTGTTGGCTTACTTCGACCTCTGTGAGAAAGGAGACATTGCCAGCAAGGAGGTTCTAGTTGGATTGTTGAGGCAGTCCAAATATCTTCAAGACAAAACATATGCATCACTCATCGGTTTGTCAGATGAGACAATTGACAACGATGTAGTTTCGGAAAAAGGTAGTAATATAGACGATGAAATCGATAAAACCGAGTTCGAATCTGATGATTCTGAGATGCTTCTCAAGTTGTGA

Protein sequence

MKTSERDIQKIAQRVQYLRYPTAKDFNSKAYYIHFSSILHGVIIISRMYVRRFPTQRKPTTSFTADDLRNRRTSERDRERDKNHKANTVSSSSNHESKKNEAKLETNRKRCQFRNDKNIEYVKVEIQFKQKKTQTRTVKKQIAMNFTPISKAGDTSSADGSRALFQKPPSDNARAKRSFRKNLSRNCKHRARAQSHRTRSSFCSPQKSLGVATTTMLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDRALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLNAYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKGDIASKEVLVGLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL
Homology
[Close]
BLAST of Lsi05G019230 vs. ExPASy Swiss-Prot
Match: Q8LPS6 (Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX=3702 GN=At1g02150 PE=2 SV=2)

HSP 1 Score: 672.2 bits (1733), Expect = 7.0e-192
Identity = 330/514 (64.20%), Postives = 413/514 (80.35%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKL---PPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYG 275
           MLLQ +V +R V L+SS SYSR L    P++   A  +         ++ CSISQV+ YG
Sbjct: 1   MLLQAAVQNRNVPLASSASYSRLLRCRSPVVSVAALSKKT------AAIVCSISQVYGYG 60

Query: 276 TVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRR 335
           TVD+ERRP+V+WNAIY++ISLME PELG+ASVLNQWE  G+KLTKWEL RVVKELRKY+R
Sbjct: 61  TVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKR 120

Query: 336 FDRALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGA 395
            ++ALE+YDWM+NR ERFRL+ SDAAIQLDLI KVRGI  AE++FL+LP+N KDRR+YG+
Sbjct: 121 ANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGS 180

Query: 396 LLNAYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKS 455
           LLNAYV+A+ REKAE LL  MR K YA HPLPFNVMMTLYMNL+EY+KV+++V EM +K 
Sbjct: 181 LLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKD 240

Query: 456 IQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKA 515
           I+LDIYSYNIWLSSCG  GS EKME VY+QMK D +I  NWTTFSTMATMYIKMG  EKA
Sbjct: 241 IRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKA 300

Query: 516 EECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISA 575
           E+ LR+VE+RI GR+RIPYHYL+SLYGS+GNK+E+YRVW++YK+V P+IPNLGYHA++S+
Sbjct: 301 EDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSS 360

Query: 576 LIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPN 635
           L+R+GD+EGAEK+YEEWL VKS+YDPRI NL +  YVK   +  AE  FDHMVE+GGKP+
Sbjct: 361 LVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPS 420

Query: 636 SSTWETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLC-EKGDIASKE 695
           SSTWE LA GHT++  +S+AL   + AFSAEGS +WRPK   +  +F LC E+ D+ SKE
Sbjct: 421 SSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKE 480

Query: 696 VLVGLLRQSKYLQDKTYASLIGLSD-ETIDNDVV 725
            ++ LLRQS  L+DK+Y +LI + +  T++N  +
Sbjct: 481 AVLELLRQSGDLEDKSYLALIDVDENRTVNNSEI 508

[Close]
BLAST of Lsi05G019230 vs. ExPASy Swiss-Prot
Match: O22714 (Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX=3702 GN=At1g60770 PE=1 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 1.5e-69
Identity = 148/418 (35.41%), Postives = 230/418 (55.02%), Query Frame = 0 

Query: 287 IYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDRALEIYDWMSNR 346
           +Y R+      E+     LNQ+    K + KWE+   +K+LR    +  AL++ + M   
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM--E 84

Query: 347 EERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLNAYVKARQREKA 406
           E     T SD AI LDL++K R I + E+YF+ LP+  K    YG+LLN Y K    EKA
Sbjct: 85  ERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 144

Query: 407 ENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYSYNIWLSS 466
           E LL KM+  +     + +N +MTLY    E EKV +++ E+  +++  D Y+YN+W+ +
Sbjct: 145 EGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRA 204

Query: 467 CGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGR 526
                    +E V E+M +D  +  +WTT+S MA++Y+  GL +KAE+ L+ +E +   R
Sbjct: 205 LAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQR 264

Query: 527 DRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIY 586
           D   Y +LI+LYG +G   E+YR+W   +   P   N+ Y  +I  L+++ D+ GAE ++
Sbjct: 265 DFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 324

Query: 587 EEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWETLADGHTKE 646
           +EW    STYD RI N+ IG Y +EG + KA    +     GGK N+ TWE   D + K 
Sbjct: 325 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 384

Query: 647 GRVSDALASWKEAFS---AEGSKSWRPKPYNV---LAYFDLCEKGDIASKEVLVGLLR 699
           G ++ AL    +A S    +G K W P P  V   ++YF+  +K D+   E L+ +L+
Sbjct: 385 GDMARALECMSKAVSIGKGDGGK-WLPSPETVRALMSYFE--QKKDVNGAENLLEILK 437

[Close]
BLAST of Lsi05G019230 vs. ExPASy Swiss-Prot
Match: Q9SKU6 (Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g20710 PE=2 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.8e-68
Identity = 144/405 (35.56%), Postives = 229/405 (56.54%), Query Frame = 0 

Query: 280 PMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDRALEI 339
           P+  ++ + RR++   +P      VL+ W ++G  +   EL  ++K LRK+ RF  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 340 YDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLNAYVK 399
            DWMS       ++  D AI+LDLI+KV G+  AE +F  +P   ++  +YGALLN Y  
Sbjct: 93  SDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 400 ARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYS 459
            +   KAE +  +M+   +    LP+NVM+ LY+   +Y  VE L+ EM +++++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 460 YNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRV 519
            N  L +  +    E ME+   + + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 520 ESRIVGRDR-IPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGD 579
           E  +  + R   Y  L+S YG+ G KEE+YR+W++YK +     N GY ++ISAL+++ D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 580 VEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWET 639
           +E  EKI EEW    S +D RI +L I  Y K+G + KAE   + +V+     ++STWE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 640 LADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCE 684
           LA G+   G++  A+  WK A        WRP    +++  D  E
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLE 434

[Close]
BLAST of Lsi05G019230 vs. ExPASy Swiss-Prot
Match: Q9SY07 (Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At4g02820 PE=2 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 6.6e-65
Identity = 138/409 (33.74%), Postives = 241/409 (58.92%), Query Frame = 0 

Query: 305 LNQWENEGKKLTKWELSRVVKELRKYRRFDRALEIYDWMSNREERFRLTTSDAAIQLDLI 364
           + +W+ EG  + K+EL+R+V+ELRK +R+  ALEI +WM  +E+  +L   D A+ LDLI
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED-IKLQAGDYAVHLDLI 140

Query: 365 SKVRGIKSAEDYFLRLPDNLKDRRIYGALLNAYVKARQREKAENLLAKMRTKSYATHPLP 424
           SK+RG+ SAE +F  +PD ++      +LL++YV+ +  +KAE L  KM    +    LP
Sbjct: 141 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 200

Query: 425 FNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMK 484
           +N M+++Y++  ++EKV  L+ E+  ++   DI +YN+WL++       E  E+VY + K
Sbjct: 201 YNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAK 260

Query: 485 QDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNK 544
           +++ +N +W T+S +  +Y K   +EKA   L+ +E  +  ++R+ Y  LISL+ ++G+K
Sbjct: 261 EEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 320

Query: 545 EEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLF 604
           + +   W   K+ F  + +  Y ++ISA++++G+ E A+ +Y+EW +V  T D RI NL 
Sbjct: 321 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLI 380

Query: 605 IGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWETLADGHTKEGRVSDALASWKEAFSAEG 664
           +  Y+    V   E F++ +VE G  P+ STWE L   + K   +   L  + +A   + 
Sbjct: 381 LAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI--DS 440

Query: 665 SKSWRPKPYNVL-AYFDLCEKGDIASKEVLVGLLRQSKYLQDKTYASLI 713
            K W      V  A  +L E+G++   E L+ LL+++ Y+  + Y SL+
Sbjct: 441 VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484

[Close]
BLAST of Lsi05G019230 vs. ExPASy Swiss-Prot
Match: Q3E911 (Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX=3702 GN=At5g27460 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 1.1e-64
Identity = 137/400 (34.25%), Postives = 219/400 (54.75%), Query Frame = 0 

Query: 289 RRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDRALEIYDWMSNREE 348
           + I     P     S+L +  + G  ++  EL  + K L +  R+D AL++ +WM N+++
Sbjct: 42  KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD 101

Query: 349 RFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRI----YGALLNAYVKARQRE 408
               +  D A++LDLI K  G+K  E+YF +L  +    R+    Y  LL AYVK +  +
Sbjct: 102 -IEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVK 161

Query: 409 KAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYSYNIWL 468
           +AE L+ K+    +   P PFN MM LY    +YEKV  +VS M    I  ++ SYN+W+
Sbjct: 162 EAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWM 221

Query: 469 SSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIV 528
           ++C        +E VY++M  D+++   W++  T+A +YIK G  EKA   L   E  + 
Sbjct: 222 NACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN 281

Query: 529 GRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGDVEGAEK 588
             +R+ Y +LI+LY S+GNKE + R+W + K+V   I  + Y  ++S+L++ GD+E AE+
Sbjct: 282 RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAER 341

Query: 589 IYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWETLADGHT 648
           ++ EW      YD R++N+ +G YV+ G + KAES    ++E GG PN  TWE L +G  
Sbjct: 342 VFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWV 401

Query: 649 KEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK 685
           K   +  A+ +  + F       WRP    V+A  +  EK
Sbjct: 402 KCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEK 440

[Close]
BLAST of Lsi05G019230 vs. ExPASy TrEMBL
Match: A0A5D3D0Y4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003570 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 3.2e-288
Identity = 502/537 (93.48%), Postives = 517/537 (96.28%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHHRTVSL SS+SYSRK  P IQSQ F  NVNYRRL LSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGK LTKWELSRVVKELRKY+RF+R
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AY KARQREKAENLLAKMRTK YATHPLPFNVMMTLYMN+KEYEKV+SLVSEMTEKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIWLSSCGLQGST+KMEEVYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LR+VESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
           VGDVEGAEKIYEEWLTVK+TYDPRIANLFIGWYVKE N+SKAE FFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WE LADGHTKEGRVSDALASWKEAFS+EGSKSWRPKPYNVLAYFDLCEK GDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
           G LRQ KYLQDK+YASLIGL DETIDND VSEKGS+I+DEIDKTE+ESDDSEMLLKL
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

[Close]
BLAST of Lsi05G019230 vs. ExPASy TrEMBL
Match: A0A1S3AVV3 (pentatricopeptide repeat-containing protein At1g02150 OS=Cucumis melo OX=3656 GN=LOC103483392 PE=4 SV=1)

HSP 1 Score: 1000.7 bits (2586), Expect = 3.2e-288
Identity = 502/537 (93.48%), Postives = 517/537 (96.28%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHHRTVSL SS+SYSRK  P IQSQ F  NVNYRRL LSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGK LTKWELSRVVKELRKY+RF+R
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AY KARQREKAENLLAKMRTK YATHPLPFNVMMTLYMN+KEYEKV+SLVSEMTEKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIWLSSCGLQGST+KMEEVYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LR+VESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
           VGDVEGAEKIYEEWLTVK+TYDPRIANLFIGWYVKE N+SKAE FFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WE LADGHTKEGRVSDALASWKEAFS+EGSKSWRPKPYNVLAYFDLCEK GDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
           G LRQ KYLQDK+YASLIGL DETIDND VSEKGS+I+DEIDKTE+ESDDSEMLLKL
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

[Close]
BLAST of Lsi05G019230 vs. ExPASy TrEMBL
Match: A0A0A0L6I4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127020 PE=4 SV=1)

HSP 1 Score: 995.0 bits (2571), Expect = 1.7e-286
Identity = 500/537 (93.11%), Postives = 512/537 (95.34%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHHRTVSL S ISYSRK  PLIQSQ F  NVNYRRLPLSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPM KWNAIYRRISLMENPELGSASVLNQWENEGK +TKWELSRVVKELRKY+RF+R
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAE+YFLRLP++LKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AY K RQREKAENLL KMRTK + THPLPFNVMMTLYMN+KEYEKVESLVSEMTE SIQL
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
           VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGN SKAESFFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WE L D HTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK GDIASKEVLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
           GLLRQ KYLQDKTYASLIGL DETIDN+ VSEKGSNI+DEIDKTE+ESDDSEM LKL
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

[Close]
BLAST of Lsi05G019230 vs. ExPASy TrEMBL
Match: A0A6J1D178 (pentatricopeptide repeat-containing protein At1g02150 OS=Momordica charantia OX=3673 GN=LOC111016090 PE=4 SV=1)

HSP 1 Score: 979.9 bits (2532), Expect = 5.8e-282
Identity = 490/537 (91.25%), Postives = 516/537 (96.09%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHHRTVSLSSSISYS KLP +I +QAF +NVN+RRL L+VTCSIS VH+YGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSGKLPCVIPAQAFRRNVNFRRLSLAVTCSISHVHNYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKY+R++R
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRYER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI SAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AYV+AR REKAENLLAKMRTK YATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEK IQL
Sbjct: 181 AYVRARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKGIQL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIWLSSCGLQGSTE ME+VYE MKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTENMEKVYELMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LRRVESRIVGRDRIPYHYLISLYGS+GNK+E YRVWNIYKTVFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSIGNKDETYRVWNIYKTVFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
           +GDVEGAEKIYEEWL+VK+TYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST
Sbjct: 361 IGDVEGAEKIYEEWLSVKTTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WETLADGHTKEGRVSDA+ASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK G+I SKEVLV
Sbjct: 421 WETLADGHTKEGRVSDAVASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGEIGSKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
            LLRQSKYLQDK+YASLIGLS++T+D+ VVS  GS+IDDE D TE+ESDDSE+LLKL
Sbjct: 481 ELLRQSKYLQDKSYASLIGLSNDTVDSSVVSGNGSSIDDERDTTEYESDDSEILLKL 537

[Close]
BLAST of Lsi05G019230 vs. ExPASy TrEMBL
Match: A0A6J1ID87 (pentatricopeptide repeat-containing protein At1g02150 OS=Cucurbita maxima OX=3661 GN=LOC111472746 PE=4 SV=1)

HSP 1 Score: 918.3 bits (2372), Expect = 2.1e-263
Identity = 459/537 (85.47%), Postives = 494/537 (91.99%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHH  VSLSSS SYS KLPP+IQSQAF +NVNYRRLPLS+TCSISQ HSYGTVD
Sbjct: 1   MLLQTSVHHYNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSISQTHSYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKK+TKWE+ RV+KELRKYRR++R
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI SAEDYF+RLP NLKDRR YGALLN
Sbjct: 121 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AYVKARQREKAE LLAKMRTK YA H L FNVMMTLY+N KEYEKVESLVSEM EK I+L
Sbjct: 181 AYVKARQREKAETLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIW+SS GLQGS EKMEEVYE+MKQDRTINANWTTFSTMATMYIK GLIEKAEEC
Sbjct: 241 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGLIEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LRRVESRIVGRDRIP+HYL+SLYGSVGNKEE YRVW +YKT+FPTIPNLG+HAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGFHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
            GD+EGAEKIYEEWL+VK+ YDPRIANLF+GWYVKEG  SKAESFF+HMVE GGKPNSS+
Sbjct: 361 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WE LADG +KEGRVSDALASWKEAFSAEGS++WRPK + VLA+F+LCEK GDIASKEVLV
Sbjct: 421 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
           GLLRQSK LQDK Y SLIGLSDETIDNDVVS +GSNIDDE DKT +ESDDSEMLL++
Sbjct: 481 GLLRQSKCLQDKAYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM 537

[Close]
BLAST of Lsi05G019230 vs. NCBI nr
Match: XP_038903663.1 (pentatricopeptide repeat-containing protein At1g02150 [Benincasa hispida])

HSP 1 Score: 1027.3 bits (2655), Expect = 6.5e-296
Identity = 519/537 (96.65%), Postives = 524/537 (97.58%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHHRTVSLSSSISYSRKLPPLIQS+AF QNVNYRRLPLSV CSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSRKLPPLIQSEAFRQNVNYRRLPLSVNCSISQVHSYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKY+RF+ 
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRFEM 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AYVKAR REKAENLLAKMRTK YATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL
Sbjct: 181 AYVKARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LRRVESRIVGRDRIPYHYLISLYGSVGNKEE YRVW IYKTVFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEETYRVWTIYKTVFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
           VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEG VSKAESFFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGTVSKAESFFDHMVEVGGKPNSST 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WE LADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK GDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
           GLLRQSKYLQDK+Y SLIGLSDETIDNDVV EK SNID+EIDKTEFESDDSEMLLKL
Sbjct: 481 GLLRQSKYLQDKSYVSLIGLSDETIDNDVVLEKDSNIDEEIDKTEFESDDSEMLLKL 537

[Close]
BLAST of Lsi05G019230 vs. NCBI nr
Match: XP_008438222.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo] >KAA0049070.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17492.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1000.7 bits (2586), Expect = 6.5e-288
Identity = 502/537 (93.48%), Postives = 517/537 (96.28%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHHRTVSL SS+SYSRK  P IQSQ F  NVNYRRL LSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSSVSYSRKFLPPIQSQPFFHNVNYRRLRLSVTCSISQVHSYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGK LTKWELSRVVKELRKY+RF+R
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKNLTKWELSRVVKELRKYKRFER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AY KARQREKAENLLAKMRTK YATHPLPFNVMMTLYMN+KEYEKV+SLVSEMTEKSIQL
Sbjct: 181 AYAKARQREKAENLLAKMRTKGYATHPLPFNVMMTLYMNVKEYEKVDSLVSEMTEKSIQL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIWLSSCGLQGST+KMEEVYEQMKQD+TINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTDKMEEVYEQMKQDKTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LR+VESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRKVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
           VGDVEGAEKIYEEWLTVK+TYDPRIANLFIGWYVKE N+SKAE FFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKATYDPRIANLFIGWYVKEANMSKAEGFFDHMVEVGGKPNSST 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WE LADGHTKEGRVSDALASWKEAFS+EGSKSWRPKPYNVLAYFDLCEK GDIASKEVLV
Sbjct: 421 WEILADGHTKEGRVSDALASWKEAFSSEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
           G LRQ KYLQDK+YASLIGL DETIDND VSEKGS+I+DEIDKTE+ESDDSEMLLKL
Sbjct: 481 GFLRQPKYLQDKSYASLIGLLDETIDNDEVSEKGSSINDEIDKTEYESDDSEMLLKL 537

[Close]
BLAST of Lsi05G019230 vs. NCBI nr
Match: XP_004133941.1 (pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativus] >KGN56639.1 hypothetical protein Csa_010401 [Cucumis sativus])

HSP 1 Score: 995.0 bits (2571), Expect = 3.6e-286
Identity = 500/537 (93.11%), Postives = 512/537 (95.34%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHHRTVSL S ISYSRK  PLIQSQ F  NVNYRRLPLSVTCSISQVHSYGTVD
Sbjct: 1   MLLQTSVHHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSISQVHSYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPM KWNAIYRRISLMENPELGSASVLNQWENEGK +TKWELSRVVKELRKY+RF+R
Sbjct: 61  FERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKELRKYKRFER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAE+YFLRLP++LKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKDRRIYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AY K RQREKAENLL KMRTK + THPLPFNVMMTLYMN+KEYEKVESLVSEMTE SIQL
Sbjct: 181 AYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVSEMTENSIQL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGL+EKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLMEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYK VFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
           VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGN SKAESFFDHMVEVGGKPNSST
Sbjct: 361 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVEVGGKPNSST 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WE L D HTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK GDIASKEVLV
Sbjct: 421 WEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGDIASKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
           GLLRQ KYLQDKTYASLIGL DETIDN+ VSEKGSNI+DEIDKTE+ESDDSEM LKL
Sbjct: 481 GLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTEYESDDSEMFLKL 537

[Close]
BLAST of Lsi05G019230 vs. NCBI nr
Match: XP_022147061.1 (pentatricopeptide repeat-containing protein At1g02150 [Momordica charantia])

HSP 1 Score: 979.9 bits (2532), Expect = 1.2e-281
Identity = 490/537 (91.25%), Postives = 516/537 (96.09%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHHRTVSLSSSISYS KLP +I +QAF +NVN+RRL L+VTCSIS VH+YGTVD
Sbjct: 1   MLLQTSVHHRTVSLSSSISYSGKLPCVIPAQAFRRNVNFRRLSLAVTCSISHVHNYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKY+R++R
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYKRYER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGI SAEDYFLRLPDNLKDRRIYGALLN
Sbjct: 121 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGITSAEDYFLRLPDNLKDRRIYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AYV+AR REKAENLLAKMRTK YATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEK IQL
Sbjct: 181 AYVRARLREKAENLLAKMRTKGYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKGIQL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIWLSSCGLQGSTE ME+VYE MKQDRTINANWTTFSTMATMYIKMGLIEKAEEC
Sbjct: 241 DIYSYNIWLSSCGLQGSTENMEKVYELMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LRRVESRIVGRDRIPYHYLISLYGS+GNK+E YRVWNIYKTVFPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPYHYLISLYGSIGNKDETYRVWNIYKTVFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
           +GDVEGAEKIYEEWL+VK+TYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST
Sbjct: 361 IGDVEGAEKIYEEWLSVKTTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WETLADGHTKEGRVSDA+ASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK G+I SKEVLV
Sbjct: 421 WETLADGHTKEGRVSDAVASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKEGEIGSKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
            LLRQSKYLQDK+YASLIGLS++T+D+ VVS  GS+IDDE D TE+ESDDSE+LLKL
Sbjct: 481 ELLRQSKYLQDKSYASLIGLSNDTVDSSVVSGNGSSIDDERDTTEYESDDSEILLKL 537

[Close]
BLAST of Lsi05G019230 vs. NCBI nr
Match: KAG6597223.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028695.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 919.1 bits (2374), Expect = 2.5e-263
Identity = 458/537 (85.29%), Postives = 496/537 (92.36%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKLPPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYGTVD 275
           MLLQTSVHH  VSLSSS SYS KLPP+IQSQAF +NVNYRRLPLS+TCS+SQ HSYGTVD
Sbjct: 1   MLLQTSVHHCNVSLSSSTSYSHKLPPVIQSQAFFRNVNYRRLPLSITCSVSQTHSYGTVD 60

Query: 276 FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDR 335
           FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKK+TKWE+ RV+KELRKYRR++R
Sbjct: 61  FERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKITKWEIFRVIKELRKYRRYER 120

Query: 336 ALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLN 395
           ALEIYDWMSNR E F+LT SDAAIQLDLISKV GI SAEDYF+RLP NLKDRR YGALLN
Sbjct: 121 ALEIYDWMSNRGETFKLTASDAAIQLDLISKVYGIASAEDYFVRLPKNLKDRRTYGALLN 180

Query: 396 AYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQL 455
           AYVKARQREKAE+LLAKMRTK YA H L FNVMMTLY+N KEYEKVESLVSEM EK I+L
Sbjct: 181 AYVKARQREKAESLLAKMRTKGYAIHTLSFNVMMTLYVNFKEYEKVESLVSEMIEKGIRL 240

Query: 456 DIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEEC 515
           DIYSYNIW+SS GLQGS EKMEEVYE+MKQDRTINANWTTFSTMATMYIK G+IEKAEEC
Sbjct: 241 DIYSYNIWISSRGLQGSIEKMEEVYERMKQDRTINANWTTFSTMATMYIKTGMIEKAEEC 300

Query: 516 LRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIR 575
           LRRVESRIVGRDRIP+HYL+SLYGSVGNKEE YRVW +YKT+FPTIPNLGYHAIISALIR
Sbjct: 301 LRRVESRIVGRDRIPFHYLMSLYGSVGNKEETYRVWKVYKTIFPTIPNLGYHAIISALIR 360

Query: 576 VGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSST 635
            GD+EGAEKIYEEWL+VK+ YDPRIANLF+GWYVKEG  SKAESFF+HMVE GGKPNSS+
Sbjct: 361 AGDIEGAEKIYEEWLSVKTAYDPRIANLFMGWYVKEGMSSKAESFFNHMVEAGGKPNSSS 420

Query: 636 WETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK-GDIASKEVLV 695
           WE LADG +KEGRVSDALASWKEAFSAEGS++WRPK + VLA+F+LCEK GDIASKEVLV
Sbjct: 421 WEILADGLSKEGRVSDALASWKEAFSAEGSRTWRPKHFKVLAFFNLCEKEGDIASKEVLV 480

Query: 696 GLLRQSKYLQDKTYASLIGLSDETIDNDVVSEKGSNIDDEIDKTEFESDDSEMLLKL 752
           GLLRQSK LQDK+Y SLIGLSDETIDNDVVS +GSNIDDE DKT +ESDDSEMLL++
Sbjct: 481 GLLRQSKCLQDKSYVSLIGLSDETIDNDVVSGEGSNIDDESDKTVYESDDSEMLLEM 537

[Close]
BLAST of Lsi05G019230 vs. TAIR 10
Match: AT1G02150.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 672.2 bits (1733), Expect = 5.0e-193
Identity = 330/514 (64.20%), Postives = 413/514 (80.35%), Query Frame = 0 

Query: 216 MLLQTSVHHRTVSLSSSISYSRKL---PPLIQSQAFHQNVNYRRLPLSVTCSISQVHSYG 275
           MLLQ +V +R V L+SS SYSR L    P++   A  +         ++ CSISQV+ YG
Sbjct: 1   MLLQAAVQNRNVPLASSASYSRLLRCRSPVVSVAALSKKT------AAIVCSISQVYGYG 60

Query: 276 TVDFERRPMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRR 335
           TVD+ERRP+V+WNAIY++ISLME PELG+ASVLNQWE  G+KLTKWEL RVVKELRKY+R
Sbjct: 61  TVDYERRPIVQWNAIYKKISLMEKPELGAASVLNQWEKAGRKLTKWELCRVVKELRKYKR 120

Query: 336 FDRALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGA 395
            ++ALE+YDWM+NR ERFRL+ SDAAIQLDLI KVRGI  AE++FL+LP+N KDRR+YG+
Sbjct: 121 ANQALEVYDWMNNRGERFRLSASDAAIQLDLIGKVRGIPDAEEFFLQLPENFKDRRVYGS 180

Query: 396 LLNAYVKARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKS 455
           LLNAYV+A+ REKAE LL  MR K YA HPLPFNVMMTLYMNL+EY+KV+++V EM +K 
Sbjct: 181 LLNAYVRAKSREKAEALLNTMRDKGYALHPLPFNVMMTLYMNLREYDKVDAMVFEMKQKD 240

Query: 456 IQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKA 515
           I+LDIYSYNIWLSSCG  GS EKME VY+QMK D +I  NWTTFSTMATMYIKMG  EKA
Sbjct: 241 IRLDIYSYNIWLSSCGSLGSVEKMELVYQQMKSDVSIYPNWTTFSTMATMYIKMGETEKA 300

Query: 516 EECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISA 575
           E+ LR+VE+RI GR+RIPYHYL+SLYGS+GNK+E+YRVW++YK+V P+IPNLGYHA++S+
Sbjct: 301 EDALRKVEARITGRNRIPYHYLLSLYGSLGNKKELYRVWHVYKSVVPSIPNLGYHALVSS 360

Query: 576 LIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPN 635
           L+R+GD+EGAEK+YEEWL VKS+YDPRI NL +  YVK   +  AE  FDHMVE+GGKP+
Sbjct: 361 LVRMGDIEGAEKVYEEWLPVKSSYDPRIPNLLMNAYVKNDQLETAEGLFDHMVEMGGKPS 420

Query: 636 SSTWETLADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLC-EKGDIASKE 695
           SSTWE LA GHT++  +S+AL   + AFSAEGS +WRPK   +  +F LC E+ D+ SKE
Sbjct: 421 SSTWEILAVGHTRKRCISEALTCLRNAFSAEGSSNWRPKVLMLSGFFKLCEEESDVTSKE 480

Query: 696 VLVGLLRQSKYLQDKTYASLIGLSD-ETIDNDVV 725
            ++ LLRQS  L+DK+Y +LI + +  T++N  +
Sbjct: 481 AVLELLRQSGDLEDKSYLALIDVDENRTVNNSEI 508

[Close]
BLAST of Lsi05G019230 vs. TAIR 10
Match: AT1G60770.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 265.8 bits (678), Expect = 1.1e-70
Identity = 148/418 (35.41%), Postives = 230/418 (55.02%), Query Frame = 0 

Query: 287 IYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDRALEIYDWMSNR 346
           +Y R+      E+     LNQ+    K + KWE+   +K+LR    +  AL++ + M   
Sbjct: 25  LYNRLFKDGGTEVKVRQQLNQFLKGTKHVFKWEVGDTIKKLRNRGLYYPALKLSEVM--E 84

Query: 347 EERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLNAYVKARQREKA 406
           E     T SD AI LDL++K R I + E+YF+ LP+  K    YG+LLN Y K    EKA
Sbjct: 85  ERGMNKTVSDQAIHLDLVAKAREITAGENYFVDLPETSKTELTYGSLLNCYCKELLTEKA 144

Query: 407 ENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYSYNIWLSS 466
           E LL KM+  +     + +N +MTLY    E EKV +++ E+  +++  D Y+YN+W+ +
Sbjct: 145 EGLLNKMKELNITPSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRA 204

Query: 467 CGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGR 526
                    +E V E+M +D  +  +WTT+S MA++Y+  GL +KAE+ L+ +E +   R
Sbjct: 205 LAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQR 264

Query: 527 DRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIY 586
           D   Y +LI+LYG +G   E+YR+W   +   P   N+ Y  +I  L+++ D+ GAE ++
Sbjct: 265 DFTAYQFLITLYGRLGKLTEVYRIWRSLRLAIPKTSNVAYLNMIQVLVKLNDLPGAETLF 324

Query: 587 EEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWETLADGHTKE 646
           +EW    STYD RI N+ IG Y +EG + KA    +     GGK N+ TWE   D + K 
Sbjct: 325 KEWQANCSTYDIRIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKS 384

Query: 647 GRVSDALASWKEAFS---AEGSKSWRPKPYNV---LAYFDLCEKGDIASKEVLVGLLR 699
           G ++ AL    +A S    +G K W P P  V   ++YF+  +K D+   E L+ +L+
Sbjct: 385 GDMARALECMSKAVSIGKGDGGK-WLPSPETVRALMSYFE--QKKDVNGAENLLEILK 437

[Close]
BLAST of Lsi05G019230 vs. TAIR 10
Match: AT2G20710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 261.5 bits (667), Expect = 2.0e-69
Identity = 144/405 (35.56%), Postives = 229/405 (56.54%), Query Frame = 0 

Query: 280 PMVKWNAIYRRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDRALEI 339
           P+  ++ + RR++   +P      VL+ W ++G  +   EL  ++K LRK+ RF  AL+I
Sbjct: 33  PLDPYDTLQRRVARSGDPSASIIKVLDGWLDQGNLVKTSELHSIIKMLRKFSRFSHALQI 92

Query: 340 YDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRIYGALLNAYVK 399
            DWMS       ++  D AI+LDLI+KV G+  AE +F  +P   ++  +YGALLN Y  
Sbjct: 93  SDWMSEHRVH-EISEGDVAIRLDLIAKVGGLGEAEKFFETIPMERRNYHLYGALLNCYAS 152

Query: 400 ARQREKAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYS 459
            +   KAE +  +M+   +    LP+NVM+ LY+   +Y  VE L+ EM +++++ DI++
Sbjct: 153 KKVLHKAEQVFQEMKELGFLKGCLPYNVMLNLYVRTGKYTMVEKLLREMEDETVKPDIFT 212

Query: 460 YNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRV 519
            N  L +  +    E ME+   + + D+ ++ +W T++  A  YIK GL EKA E LR+ 
Sbjct: 213 VNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLDWRTYADTANGYIKAGLTEKALEMLRKS 272

Query: 520 ESRIVGRDR-IPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGD 579
           E  +  + R   Y  L+S YG+ G KEE+YR+W++YK +     N GY ++ISAL+++ D
Sbjct: 273 EQMVNAQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKEL-DGFYNTGYISVISALLKMDD 332

Query: 580 VEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWET 639
           +E  EKI EEW    S +D RI +L I  Y K+G + KAE   + +V+     ++STWE 
Sbjct: 333 IEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNILVQKWRVEDTSTWER 392

Query: 640 LADGHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCE 684
           LA G+   G++  A+  WK A        WRP    +++  D  E
Sbjct: 393 LALGYKMAGKMEKAVEKWKRAIEV-SKPGWRPHQVVLMSCVDYLE 434

[Close]
BLAST of Lsi05G019230 vs. TAIR 10
Match: AT4G02820.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 250.4 bits (638), Expect = 4.7e-66
Identity = 138/409 (33.74%), Postives = 241/409 (58.92%), Query Frame = 0 

Query: 305 LNQWENEGKKLTKWELSRVVKELRKYRRFDRALEIYDWMSNREERFRLTTSDAAIQLDLI 364
           + +W+ EG  + K+EL+R+V+ELRK +R+  ALEI +WM  +E+  +L   D A+ LDLI
Sbjct: 81  IRKWKEEGHSVRKYELNRIVRELRKIKRYKHALEICEWMVVQED-IKLQAGDYAVHLDLI 140

Query: 365 SKVRGIKSAEDYFLRLPDNLKDRRIYGALLNAYVKARQREKAENLLAKMRTKSYATHPLP 424
           SK+RG+ SAE +F  +PD ++      +LL++YV+ +  +KAE L  KM    +    LP
Sbjct: 141 SKIRGLNSAEKFFEDMPDQMRGHAACTSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLP 200

Query: 425 FNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMK 484
           +N M+++Y++  ++EKV  L+ E+  ++   DI +YN+WL++       E  E+VY + K
Sbjct: 201 YNHMLSMYISRGQFEKVPVLIKELKIRT-SPDIVTYNLWLTAFASGNDVEGAEKVYLKAK 260

Query: 485 QDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNK 544
           +++ +N +W T+S +  +Y K   +EKA   L+ +E  +  ++R+ Y  LISL+ ++G+K
Sbjct: 261 EEK-LNPDWVTYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDK 320

Query: 545 EEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLF 604
           + +   W   K+ F  + +  Y ++ISA++++G+ E A+ +Y+EW +V  T D RI NL 
Sbjct: 321 DGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLI 380

Query: 605 IGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWETLADGHTKEGRVSDALASWKEAFSAEG 664
           +  Y+    V   E F++ +VE G  P+ STWE L   + K   +   L  + +A   + 
Sbjct: 381 LAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLDCFGKAI--DS 440

Query: 665 SKSWRPKPYNVL-AYFDLCEKGDIASKEVLVGLLRQSKYLQDKTYASLI 713
            K W      V  A  +L E+G++   E L+ LL+++ Y+  + Y SL+
Sbjct: 441 VKKWTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGYVNTQLYNSLL 484

[Close]
BLAST of Lsi05G019230 vs. TAIR 10
Match: AT5G27460.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 249.6 bits (636), Expect = 8.0e-66
Identity = 137/400 (34.25%), Postives = 219/400 (54.75%), Query Frame = 0 

Query: 289 RRISLMENPELGSASVLNQWENEGKKLTKWELSRVVKELRKYRRFDRALEIYDWMSNREE 348
           + I     P     S+L +  + G  ++  EL  + K L +  R+D AL++ +WM N+++
Sbjct: 42  KEILRKNGPRRSVTSLLQERIDSGHAVSLSELRLISKRLIRSNRYDLALQMMEWMENQKD 101

Query: 349 RFRLTTSDAAIQLDLISKVRGIKSAEDYFLRLPDNLKDRRI----YGALLNAYVKARQRE 408
               +  D A++LDLI K  G+K  E+YF +L  +    R+    Y  LL AYVK +  +
Sbjct: 102 -IEFSVYDIALRLDLIIKTHGLKQGEEYFEKLLHSSVSMRVAKSAYLPLLRAYVKNKMVK 161

Query: 409 KAENLLAKMRTKSYATHPLPFNVMMTLYMNLKEYEKVESLVSEMTEKSIQLDIYSYNIWL 468
           +AE L+ K+    +   P PFN MM LY    +YEKV  +VS M    I  ++ SYN+W+
Sbjct: 162 EAEALMEKLNGLGFLVTPHPFNEMMKLYEASGQYEKVVMVVSMMKGNKIPRNVLSYNLWM 221

Query: 469 SSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKMGLIEKAEECLRRVESRIV 528
           ++C        +E VY++M  D+++   W++  T+A +YIK G  EKA   L   E  + 
Sbjct: 222 NACCEVSGVAAVETVYKEMVGDKSVEVGWSSLCTLANVYIKSGFDEKARLVLEDAEKMLN 281

Query: 529 GRDRIPYHYLISLYGSVGNKEEMYRVWNIYKTVFPTIPNLGYHAIISALIRVGDVEGAEK 588
             +R+ Y +LI+LY S+GNKE + R+W + K+V   I  + Y  ++S+L++ GD+E AE+
Sbjct: 282 RSNRLGYFFLITLYASLGNKEGVVRLWEVSKSVCGRISCVNYICVLSSLVKTGDLEEAER 341

Query: 589 IYEEWLTVKSTYDPRIANLFIGWYVKEGNVSKAESFFDHMVEVGGKPNSSTWETLADGHT 648
           ++ EW      YD R++N+ +G YV+ G + KAES    ++E GG PN  TWE L +G  
Sbjct: 342 VFSEWEAQCFNYDVRVSNVLLGAYVRNGEIRKAESLHGCVLERGGTPNYKTWEILMEGWV 401

Query: 649 KEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEK 685
           K   +  A+ +  + F       WRP    V+A  +  EK
Sbjct: 402 KCENMEKAIDAMHQVFVLMRRCHWRPSHNIVMAIAEYFEK 440

The following BLAST results are available for this feature:
BLAST of Lsi05G019230 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8LPS67.0e-19264.20Pentatricopeptide repeat-containing protein At1g02150 OS=Arabidopsis thaliana OX... [more]
O227141.5e-6935.41Pentatricopeptide repeat-containing protein At1g60770 OS=Arabidopsis thaliana OX... [more]
Q9SKU62.8e-6835.56Pentatricopeptide repeat-containing protein At2g20710, mitochondrial OS=Arabidop... [more]
Q9SY076.6e-6533.74Pentatricopeptide repeat-containing protein At4g02820, mitochondrial OS=Arabidop... [more]
Q3E9111.1e-6434.25Pentatricopeptide repeat-containing protein At5g27460 OS=Arabidopsis thaliana OX... [more]
BLAST of Lsi05G019230 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3D0Y43.2e-28893.48Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A1S3AVV33.2e-28893.48pentatricopeptide repeat-containing protein At1g02150 OS=Cucumis melo OX=3656 GN... [more]
A0A0A0L6I41.7e-28693.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127020 PE=4 SV=1[more]
A0A6J1D1785.8e-28291.25pentatricopeptide repeat-containing protein At1g02150 OS=Momordica charantia OX=... [more]
A0A6J1ID872.1e-26385.47pentatricopeptide repeat-containing protein At1g02150 OS=Cucurbita maxima OX=366... [more]
BLAST of Lsi05G019230 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038903663.16.5e-29696.65pentatricopeptide repeat-containing protein At1g02150 [Benincasa hispida][more]
XP_008438222.16.5e-28893.48PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Cucumis melo] ... [more]
XP_004133941.13.6e-28693.11pentatricopeptide repeat-containing protein At1g02150 [Cucumis sativus] >KGN5663... [more]
XP_022147061.11.2e-28191.25pentatricopeptide repeat-containing protein At1g02150 [Momordica charantia][more]
KAG6597223.12.5e-26385.29Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
BLAST of Lsi05G019230 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G02150.15.0e-19364.20Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G60770.11.1e-7035.41Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT2G20710.12.0e-6935.56Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G02820.14.7e-6633.74Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G27460.18.0e-6634.25Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 443..503
e-value: 1.7E-6
score: 28.0
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 389..416
e-value: 0.001
score: 17.1
coord: 425..456
e-value: 0.0026
score: 15.8
coord: 602..632
e-value: 2.7E-5
score: 22.1
coord: 458..486
e-value: 5.6E-6
score: 24.2
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 389..416
e-value: 0.012
score: 15.8
coord: 566..589
e-value: 0.14
score: 12.5
coord: 602..628
e-value: 0.0039
score: 17.3
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 597..631
score: 9.580234
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 456..486
score: 8.823904
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 386..420
score: 9.141782
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 429..561
e-value: 6.4E-19
score: 70.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 563..690
e-value: 4.7E-16
score: 61.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 298..428
e-value: 9.4E-12
score: 46.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 373..594
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 572..667
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..86
NoneNo IPR availablePANTHERPTHR45717OS12G0527900 PROTEINcoord: 245..715
NoneNo IPR availablePANTHERPTHR45717:SF3OSJNBB0038F03.9 PROTEINcoord: 245..715

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G019230.1Lsi05G019230.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003729 mRNA binding
molecular_function GO:0005515 protein binding