Homology
BLAST of Lsi05G019210 vs. ExPASy Swiss-Prot
Match:
Q8VXX4 (Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1)
HSP 1 Score: 140.6 bits (353), Expect = 5.0e-32
Identity = 87/272 (31.99%), Postives = 157/272 (57.72%), Query Frame = 0
Query: 252 WGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 311
W DKYRPK L+ I ++ A +LK++V E+ C H +F G G GK+T+I A+L+Q +G
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPH-LLFYGPSGSGKKTLIMALLKQIYGA 62
Query: 312 QPMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMSQTKGCEKQVIVQLMKESHSP 371
++K + + D S + +E+ S+++VE+ S ++ ++ +++KE
Sbjct: 63 SAEKVKVENRAWKVDAGSRTI-DLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN 122
Query: 372 LPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLSSL 431
P + +G ++L E D+LS E ++ +E+ ++ CC+ +SK+ + S
Sbjct: 123 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 182
Query: 432 CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQ 491
C V ++ PS++EIV+VLEF+AK++ L + A RIA+ S +LR+AI SLE ++
Sbjct: 183 CLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNY 242
Query: 492 LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
F ++ WE+ +A++A +++EQSPK+
Sbjct: 243 PFTGNQVISPMDWEEYVAEIATDMMKEQSPKK 272
BLAST of Lsi05G019210 vs. ExPASy Swiss-Prot
Match:
Q852K3 (Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 PE=2 SV=1)
HSP 1 Score: 135.6 bits (340), Expect = 1.6e-30
Identity = 86/271 (31.73%), Postives = 147/271 (54.24%), Query Frame = 0
Query: 252 WGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 311
W DKYRPK L+ + + A LK++V E+ C H +F G G GK+T++ A+++Q FG
Sbjct: 3 WVDKYRPKTLDKVTVHDQVAQNLKKLVAEQDCPH-LLFYGPSGSGKKTLVMALIKQMFGA 62
Query: 312 QPMEIKEVVKVFDLKSEMLG-SIEVKVKESSHYVEVNMSQTKGCEKQVIVQLMKESHSPL 371
++K K + + + IE+ + S+H+VE+N S ++ V+ +++KE
Sbjct: 63 GADKVKMENKTWKIDTGSRNIEIELAMLSSAHHVEMNPSDAGFQDRYVVQEVIKEMAKNR 122
Query: 372 PCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLSSLC 431
P + R ++L E D+LS E ++ +E+ ++ CC+ +SK+ + S C
Sbjct: 123 PIDAKGKRAFKVLVLNEVDKLSREAQHSLRRTMEKYSASCRLILCCNSSSKVTEAVRSRC 182
Query: 432 TLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQL 491
V ++ PS+ +IV+VLEFI K++ L A RIA S NLR+AI E +
Sbjct: 183 LNVRVNAPSEDQIVQVLEFIGKKENLQLPFGFAARIAAQSNRNLRRAILFFETCKVQQYP 242
Query: 492 FEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
F ++ WE ++++A I++EQSPK+
Sbjct: 243 FTSNQVAPPLDWEQYVSEIAADIMKEQSPKR 272
BLAST of Lsi05G019210 vs. ExPASy Swiss-Prot
Match:
Q8R323 (Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1)
HSP 1 Score: 113.6 bits (283), Expect = 6.6e-24
Identity = 75/270 (27.78%), Postives = 140/270 (51.85%), Query Frame = 0
Query: 252 WGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 311
W DKYRP L +K++A +L+ +V+ H ++ G G GK+T I +LR+ +G
Sbjct: 4 WVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVY-GPSGAGKKTRIMCILRELYGI 63
Query: 312 QPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGCEKQVIVQLMK---ESHS 371
+++ + S+ IE+ S++++EVN S ++ VI +++K +S
Sbjct: 64 GVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 123
Query: 372 PLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLSSLCT 431
+ + + +LL E D+L+ + ++ +E+ ++ CC+ SK++ + S C
Sbjct: 124 LETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 183
Query: 432 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 491
V + PS ++I VL + +++G L LA R+A+ S NLR+A+ EA + F
Sbjct: 184 AVRVPAPSIEDICSVLSTVCRKEGLALPSTLARRLAEKSCRNLRKALLMCEACRVQQYPF 243
Query: 492 EEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
ED+ T WE + + A IV +Q+P++
Sbjct: 244 TEDQEIPETDWEVYLRETANAIVSQQTPQR 270
BLAST of Lsi05G019210 vs. ExPASy Swiss-Prot
Match:
Q2TBV1 (Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1)
HSP 1 Score: 113.2 bits (282), Expect = 8.6e-24
Identity = 75/270 (27.78%), Postives = 141/270 (52.22%), Query Frame = 0
Query: 252 WGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 311
W DKYRP L +K++A +L+ +V+ H ++ G G GK+T I +LR+ +G
Sbjct: 4 WVDKYRPCSLGQLDYHKEQAAQLRNLVQCGDFPHLLVY-GPSGAGKKTRIMCILRELYGV 63
Query: 312 QPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGCEKQVIVQLMK---ESHS 371
+++ + S+ IE+ S++++EVN S ++ VI +++K +S
Sbjct: 64 GVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 123
Query: 372 PLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLSSLCT 431
+ + + +LL E D+L+ + ++ +E+ ++ CC+ SK++ + S C
Sbjct: 124 LETSSQKDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 183
Query: 432 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 491
V + PS ++I VL + K++G +L +LA R+A+ S NLR+A+ EA + F
Sbjct: 184 AVRVPAPSIEDICHVLSTVCKKEGLNLPPQLAHRLAEKSCRNLRKALLMCEACRVQQYPF 243
Query: 492 EEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
D+ T WE + + A IV +Q+P++
Sbjct: 244 TADQEIPETDWEVYLRETANAIVSQQTPQR 270
BLAST of Lsi05G019210 vs. ExPASy Swiss-Prot
Match:
P40938 (Replication factor C subunit 3 OS=Homo sapiens OX=9606 GN=RFC3 PE=1 SV=2)
HSP 1 Score: 112.1 bits (279), Expect = 1.9e-23
Identity = 75/270 (27.78%), Postives = 141/270 (52.22%), Query Frame = 0
Query: 252 WGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 311
W DKYRP L +K++A +L+ +V+ H ++ G G GK+T I +LR+ +G
Sbjct: 4 WVDKYRPCSLGRLDYHKEQAAQLRNLVQCGDFPHLLVY-GPSGAGKKTRIMCILRELYGV 63
Query: 312 QPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGCEKQVIVQLMK---ESHS 371
+++ + S+ IE+ S++++EVN S ++ VI +++K +S
Sbjct: 64 GVEKLRIEHQTITTPSKK--KIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ 123
Query: 372 PLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLSSLCT 431
+ + + +LL E D+L+ + ++ +E+ ++ CC+ SK++ + S C
Sbjct: 124 LETNSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL 183
Query: 432 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 491
V + PS ++I VL + K++G +L +LA R+A+ S NLR+A+ EA + F
Sbjct: 184 AVRVPAPSIEDICHVLSTVCKKEGLNLPSQLAHRLAEKSCRNLRKALLMCEACRVQQYPF 243
Query: 492 EEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
D+ T WE + + A IV +Q+P++
Sbjct: 244 TADQEIPETDWEVYLRETANAIVSQQTPQR 270
BLAST of Lsi05G019210 vs. ExPASy TrEMBL
Match:
A0A1S3AWH3 (replication factor C subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103483394 PE=4 SV=1)
HSP 1 Score: 779.6 bits (2012), Expect = 7.9e-222
Identity = 433/530 (81.70%), Postives = 457/530 (86.23%), Query Frame = 0
Query: 1 MATQQQQQQQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSG 60
MATQQQ QQ PSLRRSLSDS+HRRR RRRATISTTSSKSSWSSKLGKLLARLAL S
Sbjct: 1 MATQQQLQQ---PSLRRSLSDSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSR 60
Query: 61 DSDLTEESLEAHNKRINDLDTLDKTPKTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTTT 120
DSDLTEESLEAHNKRINDLDTL+KTPK+SPYYRGLTDSSLAINYHHGPL STP++V
Sbjct: 61 DSDLTEESLEAHNKRINDLDTLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNV---- 120
Query: 121 TPRGPHTYATSAATSTQSSLVSKFKDYWAPCLRKPPPQQQQSSGPHNSK---MPRQHQRI 180
TYATSAA STQSS+VSKFK+YWAPCLRK QQQQ PH + PRQHQRI
Sbjct: 121 ------TYATSAAPSTQSSIVSKFKEYWAPCLRK---QQQQQQPPHTTPHKVPPRQHQRI 180
Query: 181 QTVTTTVVAKTASLGSTSANNNNNNNNKEEEIRESTRDEAERKKLLRERL-VSNGGRR-- 240
QTVTT+ T + +S + + + N KEE S+ + +KKLLRERL VSNGG R
Sbjct: 181 QTVTTSTTVVTKATWFSSGSTSASANFKEE---MSSDEMMTKKKLLRERLVVSNGGERRD 240
Query: 241 -----GGSGGGVGVVVEMEKERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYY 300
G GGGV VV EMEKERYSWGD YRPK LEDFICNKK AIELKEMVKEKGCGHYY
Sbjct: 241 RGGGSGSGGGGVVVVEEMEKERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYY 300
Query: 301 IFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN 360
IFEGAPGVGKRTMIQAMLR+AFG+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN
Sbjct: 301 IFEGAPGVGKRTMIQAMLREAFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN 360
Query: 361 MSQTKGCEKQVIVQLMKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCS 420
MSQTKG EKQVIVQLMKESHSPLPCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+
Sbjct: 361 MSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCT 420
Query: 421 KIFFCCSDASKLLLLSSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSK 480
KIFFCC+DASKL LLSS+CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSK
Sbjct: 421 KIFFCCTDASKLHLLSSVCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSK 480
Query: 481 NNLRQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
NNLRQAIRSLEASWKKSQLF+EDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 481 NNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQ 511
BLAST of Lsi05G019210 vs. ExPASy TrEMBL
Match:
A0A5A7TZV7 (Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G003010 PE=4 SV=1)
HSP 1 Score: 761.5 bits (1965), Expect = 2.2e-216
Identity = 417/510 (81.76%), Postives = 441/510 (86.47%), Query Frame = 0
Query: 21 DSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSGDSDLTEESLEAHNKRINDLD 80
DS+HRRR RRRATISTTSSKSSWSSKLGKLLARLAL S DSDLTEESLEAHNKRINDLD
Sbjct: 4 DSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSDLTEESLEAHNKRINDLD 63
Query: 81 TLDKTPKTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTTTTPRGPHTYATSAATSTQSSL 140
TL+KTPK+SPYYRGLTDSSLAINYHHGPL STP++V TYATSAA STQSS+
Sbjct: 64 TLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNV----------TYATSAAPSTQSSI 123
Query: 141 VSKFKDYWAPCLRKPPPQQQQSSGPHNSK---MPRQHQRIQTVTTTVVAKTASLGSTSAN 200
VSKFK+YWAPCLRK QQQQ PH + PRQHQRIQTVTT+ T + +S +
Sbjct: 124 VSKFKEYWAPCLRK---QQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGS 183
Query: 201 NNNNNNNKEEEIRESTRDEAERKKLLRERL-VSNGGRR-------GGSGGGVGVVVEMEK 260
+ + N KEE S+ + +KKLLRERL VSNGG R G GGGV VV EMEK
Sbjct: 184 TSASANFKEE---MSSDEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEK 243
Query: 261 ERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQ 320
ERYSWGD YRPK LEDFICNKK AIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+
Sbjct: 244 ERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRE 303
Query: 321 AFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGCEKQVIVQLMKESH 380
AFG+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKG EKQVIVQLMKESH
Sbjct: 304 AFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESH 363
Query: 381 SPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLLLLSSLCT 440
SPLPCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+KIFFCC+DASKL LLSS+CT
Sbjct: 364 SPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCT 423
Query: 441 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 500
LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF
Sbjct: 424 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 483
Query: 501 EEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
+EDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 484 DEDENKLLTGWEDDIADVAKKIVEEQSPKQ 497
BLAST of Lsi05G019210 vs. ExPASy TrEMBL
Match:
A0A0A0L960 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127040 PE=4 SV=1)
HSP 1 Score: 752.3 bits (1941), Expect = 1.4e-213
Identity = 424/527 (80.46%), Postives = 445/527 (84.44%), Query Frame = 0
Query: 1 MATQQQQQQQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSG 60
MATQQ+QQ PSLRRSLSDS+HRRR RRRATISTTSSKSSWSSKLGKLLARLA S
Sbjct: 1 MATQQEQQ----PSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSR 60
Query: 61 DSDLTEESLEAHNKRINDLDTLDKTPKTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTTT 120
DSDLTEESLEAHNKRINDLDTLDKTPK+SPYYRGLTDSSLAINYHHGPL STP+HV
Sbjct: 61 DSDLTEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHV---- 120
Query: 121 TPRGPHTYATSAATSTQSSLVSKFKDYWAPCLRKPPPQQQQSSGPHNSKMPRQHQRIQTV 180
TYATSAA STQSS+VSKFKDY APCLRK PQ Q+S K+PRQHQRIQTV
Sbjct: 121 ------TYATSAAPSTQSSIVSKFKDYMAPCLRKQQPQSPQTS---PRKVPRQHQRIQTV 180
Query: 181 TTTVVAKTASLGSTSANNNNNNNNKEEEIRESTRDEAERKKLLRERLV--SNGGRR---- 240
TT T + +S + + + KEE S+ + +KKLLRERLV + GGRR
Sbjct: 181 TTATTVVTKATWFSSGSTSASATFKEE--MSSSDEMMTKKKLLRERLVVPNGGGRRDSGG 240
Query: 241 --GGSGGGVGVVVEMEKERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFE 300
G SGGGV VV EMEKERYSWGD RPKVLEDFICNKK AIELKEMVKEKGCGHYYIFE
Sbjct: 241 GSGSSGGGVVVVEEMEKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFE 300
Query: 301 GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ 360
GAPGVGKRTMIQAMLRQAFG+Q MEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ
Sbjct: 301 GAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ 360
Query: 361 TKGCEKQVIVQLMKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIF 420
TKG EKQVIVQLMKESHSPLPCNH NCR DQLS ETLMY+KWA+ER KGCSKIF
Sbjct: 361 TKGFEKQVIVQLMKESHSPLPCNHANCR-------DQLSIETLMYIKWAMERYKGCSKIF 420
Query: 421 FCCSDASKLLLLSSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNL 480
FCCSDASKLLLLSSLCTLV LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNL
Sbjct: 421 FCCSDASKLLLLSSLCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNL 480
Query: 481 RQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
RQAIRSLEASWKKSQLF+EDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 481 RQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQ 501
BLAST of Lsi05G019210 vs. ExPASy TrEMBL
Match:
A0A6J1IEE5 (replication factor C subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111474906 PE=4 SV=1)
HSP 1 Score: 649.0 bits (1673), Expect = 1.6e-182
Identity = 378/530 (71.32%), Postives = 419/530 (79.06%), Query Frame = 0
Query: 2 ATQQQQQQQPNPSLRRSLSDSDHRRRRRR---ATISTTSSKSSWSSKLGKLLARLALFSG 61
ATQQQ + SLRRSLSDS+ RRR+RR + +++SSKSSWS+KL KLLARL LFS
Sbjct: 3 ATQQQPNFSSSSSLRRSLSDSNTRRRQRRHWSISTASSSSKSSWSTKLAKLLARLNLFSR 62
Query: 62 DSDLTEESLEAHNKRINDLDTLDKTP-KTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTT 121
+SDLTEESL+AHN+RI+D LDKTP K+SPYYRGLTDSSLAINYHHGPLT+T HVTT
Sbjct: 63 NSDLTEESLQAHNERIDD---LDKTPLKSSPYYRGLTDSSLAINYHHGPLTTT--HVTT- 122
Query: 122 TTPRGPHTYATSAATS-TQSSL----VSKFKDYWAPCLRKPPPQQQQSSGPHNSKMPRQH 181
GPH YA+S T+ TQ+SL VSK K+ WAPCL G N K P H
Sbjct: 123 ----GPHHYASSTTTAQTQTSLSYAVVSKLKE-WAPCL----------IGKPNKKPPAHH 182
Query: 182 QRIQTVTTTVVAKTASLGSTSANNNNNNNNKEEEIRESTRDEAERKKLLRERLVSNGGRR 241
Q TTTVV KT SL ++S+ E+I ++ E KLLRERLV G R
Sbjct: 183 QHETPTTTTVVGKTTSLATSSS---------PEKIERLATEKEE--KLLRERLVMYGRRE 242
Query: 242 GGS-----GGGVGVVVEMEKERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYY 301
G S GGG E EKERY+WGDKYRPKVLEDFICN++ A ELK++V+EKGCGH Y
Sbjct: 243 GRSGVGVDGGGEASEKEKEKERYTWGDKYRPKVLEDFICNRQTACELKKVVEEKGCGH-Y 302
Query: 302 IFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN 361
IFEG PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN
Sbjct: 303 IFEGPPGVGKRTMIQAMLRQAFGEQAMEVKEVGRVFALKSEMVGSIEVKVKESSHCVEVN 362
Query: 362 MSQTKGCEKQVIVQLMKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCS 421
+SQTKG EKQVI QL+KE+ SPLPCNH CRGILLCEADQLSNETLMYVKWAIERNKGCS
Sbjct: 363 LSQTKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCS 422
Query: 422 KIFFCCSDASKLLLLSSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSK 481
KIFFCCSD SKLLLLSSLCT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSK
Sbjct: 423 KIFFCCSDVSKLLLLSSLCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSK 482
Query: 482 NNLRQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
NNLRQAIRSLEASWKKS+LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 483 NNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 499
BLAST of Lsi05G019210 vs. ExPASy TrEMBL
Match:
A0A6J1G337 (replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC111450354 PE=4 SV=1)
HSP 1 Score: 641.0 bits (1652), Expect = 4.4e-180
Identity = 373/521 (71.59%), Postives = 411/521 (78.89%), Query Frame = 0
Query: 2 ATQQQQQQQPNPSLRRSLSDSDHRRR-RRRATIST--TSSKSSWSSKLGKLLARLALFSG 61
ATQQQ + SLRRSLSDS+ RRR RRR +IST +SSKSSWS+KL KLLARL LFS
Sbjct: 3 ATQQQPNSSSSSSLRRSLSDSNTRRRQRRRGSISTASSSSKSSWSTKLAKLLARLNLFSR 62
Query: 62 DSDLTEESLEAHNKRINDLDTLDKTP-KTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTT 121
+SDLTEESL+AHN+RI+D LDKTP K+SPYYRGLTDSSLAINYHHGPLT+ P H ++
Sbjct: 63 NSDLTEESLQAHNERIDD---LDKTPLKSSPYYRGLTDSSLAINYHHGPLTTGPHHYASS 122
Query: 122 TTPRGPHTYATSAATSTQSSLVSKFKDYWAPCLRKPPPQQQQSSGPHNSKMPRQHQRIQT 181
TT TS ++VSK K+ WAPCL G N+K P Q
Sbjct: 123 TT-------TAQTQTSLSYAVVSKLKE-WAPCL----------IGKPNTKPPAHQQYETP 182
Query: 182 VTTTVVAKTASLGSTSANNNNNNNNKEEEIRESTRDEAERKKLLRERLVSNGGRRGGSGG 241
TTTVV KT SL +S + E+ R +T E +KLLRERLV G R GGSG
Sbjct: 183 TTTTVVGKTTSLAVSS--------SPEKIERWATEKE---EKLLRERLVMYGRREGGSGV 242
Query: 242 GV-GVVVEMEKERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVG 301
GV G EKERY+WGDKYRPKVLEDFICN+K A ELK++V+EKGCGH YIFEG PGVG
Sbjct: 243 GVDGGGEAAEKERYTWGDKYRPKVLEDFICNRKTACELKKVVEEKGCGH-YIFEGPPGVG 302
Query: 302 KRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGCEK 361
KRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN+SQTKG EK
Sbjct: 303 KRTMIQAMLRQAFGEQAMEVKEVDRVFALKSEMVGSIEVKVKESSHCVEVNLSQTKGFEK 362
Query: 362 QVIVQLMKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDA 421
QVI QL+KE+ SPLPCNH CRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSD
Sbjct: 363 QVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDV 422
Query: 422 SKLLLLSSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRS 481
SKLLLLSS CT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSKNNLRQAIRS
Sbjct: 423 SKLLLLSSFCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSKNNLRQAIRS 482
Query: 482 LEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
LEASWKKS+LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 483 LEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 490
BLAST of Lsi05G019210 vs. NCBI nr
Match:
XP_008438224.1 (PREDICTED: replication factor C subunit 3-like [Cucumis melo])
HSP 1 Score: 779.6 bits (2012), Expect = 1.6e-221
Identity = 433/530 (81.70%), Postives = 457/530 (86.23%), Query Frame = 0
Query: 1 MATQQQQQQQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSG 60
MATQQQ QQ PSLRRSLSDS+HRRR RRRATISTTSSKSSWSSKLGKLLARLAL S
Sbjct: 1 MATQQQLQQ---PSLRRSLSDSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSR 60
Query: 61 DSDLTEESLEAHNKRINDLDTLDKTPKTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTTT 120
DSDLTEESLEAHNKRINDLDTL+KTPK+SPYYRGLTDSSLAINYHHGPL STP++V
Sbjct: 61 DSDLTEESLEAHNKRINDLDTLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNV---- 120
Query: 121 TPRGPHTYATSAATSTQSSLVSKFKDYWAPCLRKPPPQQQQSSGPHNSK---MPRQHQRI 180
TYATSAA STQSS+VSKFK+YWAPCLRK QQQQ PH + PRQHQRI
Sbjct: 121 ------TYATSAAPSTQSSIVSKFKEYWAPCLRK---QQQQQQPPHTTPHKVPPRQHQRI 180
Query: 181 QTVTTTVVAKTASLGSTSANNNNNNNNKEEEIRESTRDEAERKKLLRERL-VSNGGRR-- 240
QTVTT+ T + +S + + + N KEE S+ + +KKLLRERL VSNGG R
Sbjct: 181 QTVTTSTTVVTKATWFSSGSTSASANFKEE---MSSDEMMTKKKLLRERLVVSNGGERRD 240
Query: 241 -----GGSGGGVGVVVEMEKERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYY 300
G GGGV VV EMEKERYSWGD YRPK LEDFICNKK AIELKEMVKEKGCGHYY
Sbjct: 241 RGGGSGSGGGGVVVVEEMEKERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYY 300
Query: 301 IFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN 360
IFEGAPGVGKRTMIQAMLR+AFG+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN
Sbjct: 301 IFEGAPGVGKRTMIQAMLREAFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN 360
Query: 361 MSQTKGCEKQVIVQLMKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCS 420
MSQTKG EKQVIVQLMKESHSPLPCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+
Sbjct: 361 MSQTKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCT 420
Query: 421 KIFFCCSDASKLLLLSSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSK 480
KIFFCC+DASKL LLSS+CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSK
Sbjct: 421 KIFFCCTDASKLHLLSSVCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSK 480
Query: 481 NNLRQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
NNLRQAIRSLEASWKKSQLF+EDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 481 NNLRQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQ 511
BLAST of Lsi05G019210 vs. NCBI nr
Match:
XP_011650816.1 (replication factor C subunit 3 [Cucumis sativus])
HSP 1 Score: 773.1 bits (1995), Expect = 1.5e-219
Identity = 431/527 (81.78%), Postives = 452/527 (85.77%), Query Frame = 0
Query: 1 MATQQQQQQQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSG 60
MATQQ+QQ PSLRRSLSDS+HRRR RRRATISTTSSKSSWSSKLGKLLARLA S
Sbjct: 1 MATQQEQQ----PSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSR 60
Query: 61 DSDLTEESLEAHNKRINDLDTLDKTPKTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTTT 120
DSDLTEESLEAHNKRINDLDTLDKTPK+SPYYRGLTDSSLAINYHHGPL STP+HV
Sbjct: 61 DSDLTEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHV---- 120
Query: 121 TPRGPHTYATSAATSTQSSLVSKFKDYWAPCLRKPPPQQQQSSGPHNSKMPRQHQRIQTV 180
TYATSAA STQSS+VSKFKDY APCLRK PQ Q+S K+PRQHQRIQTV
Sbjct: 121 ------TYATSAAPSTQSSIVSKFKDYMAPCLRKQQPQSPQTS---PRKVPRQHQRIQTV 180
Query: 181 TTTVVAKTASLGSTSANNNNNNNNKEEEIRESTRDEAERKKLLRERLV--SNGGRR---- 240
TT T + +S + + + KEE S+ + +KKLLRERLV + GGRR
Sbjct: 181 TTATTVVTKATWFSSGSTSASATFKEE--MSSSDEMMTKKKLLRERLVVPNGGGRRDSGG 240
Query: 241 --GGSGGGVGVVVEMEKERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFE 300
G SGGGV VV EMEKERYSWGD RPKVLEDFICNKK AIELKEMVKEKGCGHYYIFE
Sbjct: 241 GSGSSGGGVVVVEEMEKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFE 300
Query: 301 GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ 360
GAPGVGKRTMIQAMLRQAFG+Q MEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ
Sbjct: 301 GAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ 360
Query: 361 TKGCEKQVIVQLMKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIF 420
TKG EKQVIVQLMKESHSPLPCNH NCRGILLCEADQLS ETLMY+KWA+ER KGCSKIF
Sbjct: 361 TKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIF 420
Query: 421 FCCSDASKLLLLSSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNL 480
FCCSDASKLLLLSSLCTLV LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNL
Sbjct: 421 FCCSDASKLLLLSSLCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNL 480
Query: 481 RQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
RQAIRSLEASWKKSQLF+EDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 481 RQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQ 508
BLAST of Lsi05G019210 vs. NCBI nr
Match:
KAE8650277.1 (hypothetical protein Csa_010879 [Cucumis sativus])
HSP 1 Score: 773.1 bits (1995), Expect = 1.5e-219
Identity = 431/527 (81.78%), Postives = 452/527 (85.77%), Query Frame = 0
Query: 1 MATQQQQQQQPNPSLRRSLSDSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSG 60
MATQQ+QQ PSLRRSLSDS+HRRR RRRATISTTSSKSSWSSKLGKLLARLA S
Sbjct: 1 MATQQEQQ----PSLRRSLSDSNHRRRRNRRRATISTTSSKSSWSSKLGKLLARLAFLSR 60
Query: 61 DSDLTEESLEAHNKRINDLDTLDKTPKTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTTT 120
DSDLTEESLEAHNKRINDLDTLDKTPK+SPYYRGLTDSSLAINYHHGPL STP+HV
Sbjct: 61 DSDLTEESLEAHNKRINDLDTLDKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYHV---- 120
Query: 121 TPRGPHTYATSAATSTQSSLVSKFKDYWAPCLRKPPPQQQQSSGPHNSKMPRQHQRIQTV 180
TYATSAA STQSS+VSKFKDY APCLRK PQ Q+S K+PRQHQRIQTV
Sbjct: 121 ------TYATSAAPSTQSSIVSKFKDYMAPCLRKQQPQSPQTS---PRKVPRQHQRIQTV 180
Query: 181 TTTVVAKTASLGSTSANNNNNNNNKEEEIRESTRDEAERKKLLRERLV--SNGGRR---- 240
TT T + +S + + + KEE S+ + +KKLLRERLV + GGRR
Sbjct: 181 TTATTVVTKATWFSSGSTSASATFKEE--MSSSDEMMTKKKLLRERLVVPNGGGRRDSGG 240
Query: 241 --GGSGGGVGVVVEMEKERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFE 300
G SGGGV VV EMEKERYSWGD RPKVLEDFICNKK AIELKEMVKEKGCGHYYIFE
Sbjct: 241 GSGSSGGGVVVVEEMEKERYSWGDSCRPKVLEDFICNKKTAIELKEMVKEKGCGHYYIFE 300
Query: 301 GAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ 360
GAPGVGKRTMIQAMLRQAFG+Q MEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ
Sbjct: 301 GAPGVGKRTMIQAMLRQAFGNQSMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQ 360
Query: 361 TKGCEKQVIVQLMKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIF 420
TKG EKQVIVQLMKESHSPLPCNH NCRGILLCEADQLS ETLMY+KWA+ER KGCSKIF
Sbjct: 361 TKGFEKQVIVQLMKESHSPLPCNHANCRGILLCEADQLSIETLMYIKWAMERYKGCSKIF 420
Query: 421 FCCSDASKLLLLSSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNL 480
FCCSDASKLLLLSSLCTLV LSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNS+NNL
Sbjct: 421 FCCSDASKLLLLSSLCTLVRLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSRNNL 480
Query: 481 RQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
RQAIRSLEASWKKSQLF+EDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 481 RQAIRSLEASWKKSQLFDEDENKLLTGWEDDIADVAKKIVEEQSPKQ 508
BLAST of Lsi05G019210 vs. NCBI nr
Match:
KAA0049072.1 (replication factor C subunit 3-like [Cucumis melo var. makuwa])
HSP 1 Score: 761.5 bits (1965), Expect = 4.6e-216
Identity = 417/510 (81.76%), Postives = 441/510 (86.47%), Query Frame = 0
Query: 21 DSDHRRR--RRRATISTTSSKSSWSSKLGKLLARLALFSGDSDLTEESLEAHNKRINDLD 80
DS+HRRR RRRATISTTSSKSSWSSKLGKLLARLAL S DSDLTEESLEAHNKRINDLD
Sbjct: 4 DSNHRRRRSRRRATISTTSSKSSWSSKLGKLLARLALLSRDSDLTEESLEAHNKRINDLD 63
Query: 81 TLDKTPKTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTTTTPRGPHTYATSAATSTQSSL 140
TL+KTPK+SPYYRGLTDSSLAINYHHGPL STP++V TYATSAA STQSS+
Sbjct: 64 TLEKTPKSSPYYRGLTDSSLAINYHHGPLNSTPYNV----------TYATSAAPSTQSSI 123
Query: 141 VSKFKDYWAPCLRKPPPQQQQSSGPHNSK---MPRQHQRIQTVTTTVVAKTASLGSTSAN 200
VSKFK+YWAPCLRK QQQQ PH + PRQHQRIQTVTT+ T + +S +
Sbjct: 124 VSKFKEYWAPCLRK---QQQQQQPPHTTPHKVPPRQHQRIQTVTTSTTVVTKATWFSSGS 183
Query: 201 NNNNNNNKEEEIRESTRDEAERKKLLRERL-VSNGGRR-------GGSGGGVGVVVEMEK 260
+ + N KEE S+ + +KKLLRERL VSNGG R G GGGV VV EMEK
Sbjct: 184 TSASANFKEE---MSSDEMMTKKKLLRERLVVSNGGERRDRGGGSGSGGGGVVVVEEMEK 243
Query: 261 ERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQ 320
ERYSWGD YRPK LEDFICNKK AIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLR+
Sbjct: 244 ERYSWGDNYRPKFLEDFICNKKTAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRE 303
Query: 321 AFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGCEKQVIVQLMKESH 380
AFG+Q +EIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKG EKQVIVQLMKESH
Sbjct: 304 AFGNQSVEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVNMSQTKGFEKQVIVQLMKESH 363
Query: 381 SPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLLLLSSLCT 440
SPLPCNH NCRGILLCEADQLSNETLMYVKWAIERNKGC+KIFFCC+DASKL LLSS+CT
Sbjct: 364 SPLPCNHANCRGILLCEADQLSNETLMYVKWAIERNKGCTKIFFCCTDASKLHLLSSVCT 423
Query: 441 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 500
LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF
Sbjct: 424 LVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQLF 483
Query: 501 EEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
+EDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 484 DEDENKLLTGWEDDIADVAKKIVEEQSPKQ 497
BLAST of Lsi05G019210 vs. NCBI nr
Match:
XP_022975501.1 (replication factor C subunit 3-like [Cucurbita maxima])
HSP 1 Score: 649.0 bits (1673), Expect = 3.3e-182
Identity = 378/530 (71.32%), Postives = 419/530 (79.06%), Query Frame = 0
Query: 2 ATQQQQQQQPNPSLRRSLSDSDHRRRRRR---ATISTTSSKSSWSSKLGKLLARLALFSG 61
ATQQQ + SLRRSLSDS+ RRR+RR + +++SSKSSWS+KL KLLARL LFS
Sbjct: 3 ATQQQPNFSSSSSLRRSLSDSNTRRRQRRHWSISTASSSSKSSWSTKLAKLLARLNLFSR 62
Query: 62 DSDLTEESLEAHNKRINDLDTLDKTP-KTSPYYRGLTDSSLAINYHHGPLTSTPFHVTTT 121
+SDLTEESL+AHN+RI+D LDKTP K+SPYYRGLTDSSLAINYHHGPLT+T HVTT
Sbjct: 63 NSDLTEESLQAHNERIDD---LDKTPLKSSPYYRGLTDSSLAINYHHGPLTTT--HVTT- 122
Query: 122 TTPRGPHTYATSAATS-TQSSL----VSKFKDYWAPCLRKPPPQQQQSSGPHNSKMPRQH 181
GPH YA+S T+ TQ+SL VSK K+ WAPCL G N K P H
Sbjct: 123 ----GPHHYASSTTTAQTQTSLSYAVVSKLKE-WAPCL----------IGKPNKKPPAHH 182
Query: 182 QRIQTVTTTVVAKTASLGSTSANNNNNNNNKEEEIRESTRDEAERKKLLRERLVSNGGRR 241
Q TTTVV KT SL ++S+ E+I ++ E KLLRERLV G R
Sbjct: 183 QHETPTTTTVVGKTTSLATSSS---------PEKIERLATEKEE--KLLRERLVMYGRRE 242
Query: 242 GGS-----GGGVGVVVEMEKERYSWGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYY 301
G S GGG E EKERY+WGDKYRPKVLEDFICN++ A ELK++V+EKGCGH Y
Sbjct: 243 GRSGVGVDGGGEASEKEKEKERYTWGDKYRPKVLEDFICNRQTACELKKVVEEKGCGH-Y 302
Query: 302 IFEGAPGVGKRTMIQAMLRQAFGDQPMEIKEVVKVFDLKSEMLGSIEVKVKESSHYVEVN 361
IFEG PGVGKRTMIQAMLRQAFG+Q ME+KEV +VF LKSEM+GSIEVKVKESSH VEVN
Sbjct: 303 IFEGPPGVGKRTMIQAMLRQAFGEQAMEVKEVGRVFALKSEMVGSIEVKVKESSHCVEVN 362
Query: 362 MSQTKGCEKQVIVQLMKESHSPLPCNHTNCRGILLCEADQLSNETLMYVKWAIERNKGCS 421
+SQTKG EKQVI QL+KE+ SPLPCNH CRGILLCEADQLSNETLMYVKWAIERNKGCS
Sbjct: 363 LSQTKGFEKQVIDQLIKETQSPLPCNHARCRGILLCEADQLSNETLMYVKWAIERNKGCS 422
Query: 422 KIFFCCSDASKLLLLSSLCTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSK 481
KIFFCCSD SKLLLLSSLCT VHLSPPSKQEIVEVLE+IAKQQ FDLS+R+AERIADNSK
Sbjct: 423 KIFFCCSDVSKLLLLSSLCTHVHLSPPSKQEIVEVLEYIAKQQEFDLSRRMAERIADNSK 482
Query: 482 NNLRQAIRSLEASWKKSQLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
NNLRQAIRSLEASWKKS+LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ
Sbjct: 483 NNLRQAIRSLEASWKKSRLFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 499
BLAST of Lsi05G019210 vs. TAIR 10
Match:
AT5G27740.1 (ATPase family associated with various cellular activities (AAA) )
HSP 1 Score: 140.6 bits (353), Expect = 3.6e-33
Identity = 87/272 (31.99%), Postives = 157/272 (57.72%), Query Frame = 0
Query: 252 WGDKYRPKVLEDFICNKKRAIELKEMVKEKGCGHYYIFEGAPGVGKRTMIQAMLRQAFGD 311
W DKYRPK L+ I ++ A +LK++V E+ C H +F G G GK+T+I A+L+Q +G
Sbjct: 3 WVDKYRPKSLDKVIVHEDIAQKLKKLVSEQDCPH-LLFYGPSGSGKKTLIMALLKQIYGA 62
Query: 312 QPMEIKEVVKVF--DLKSEMLGSIEVKVKESSHYVEVNMSQTKGCEKQVIVQLMKESHSP 371
++K + + D S + +E+ S+++VE+ S ++ ++ +++KE
Sbjct: 63 SAEKVKVENRAWKVDAGSRTI-DLELTTLSSTNHVELTPSDAGFQDRYIVQEIIKEMAKN 122
Query: 372 LPCNHTNCRG---ILLCEADQLSNETLMYVKWAIERNKGCSKIFFCCSDASKLL-LLSSL 431
P + +G ++L E D+LS E ++ +E+ ++ CC+ +SK+ + S
Sbjct: 123 RPIDTKGKKGYKVLVLNEVDKLSREAQHSLRRTMEKYSSSCRLILCCNSSSKVTEAIKSR 182
Query: 432 CTLVHLSPPSKQEIVEVLEFIAKQQGFDLSKRLAERIADNSKNNLRQAIRSLEASWKKSQ 491
C V ++ PS++EIV+VLEF+AK++ L + A RIA+ S +LR+AI SLE ++
Sbjct: 183 CLNVRINAPSQEEIVKVLEFVAKKESLQLPQGFAARIAEKSNRSLRRAILSLETCRVQNY 242
Query: 492 LFEEDENKLLTGWEDDIADVAKKIVEEQSPKQ 518
F ++ WE+ +A++A +++EQSPK+
Sbjct: 243 PFTGNQVISPMDWEEYVAEIATDMMKEQSPKK 272
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Q8VXX4 | 5.0e-32 | 31.99 | Replication factor C subunit 3 OS=Arabidopsis thaliana OX=3702 GN=RFC3 PE=2 SV=1 | [more] |
| Q852K3 | 1.6e-30 | 31.73 | Replication factor C subunit 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RFC5 ... | [more] |
| Q8R323 | 6.6e-24 | 27.78 | Replication factor C subunit 3 OS=Mus musculus OX=10090 GN=Rfc3 PE=1 SV=1 | [more] |
| Q2TBV1 | 8.6e-24 | 27.78 | Replication factor C subunit 3 OS=Bos taurus OX=9913 GN=RFC3 PE=2 SV=1 | [more] |
| P40938 | 1.9e-23 | 27.78 | Replication factor C subunit 3 OS=Homo sapiens OX=9606 GN=RFC3 PE=1 SV=2 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| A0A1S3AWH3 | 7.9e-222 | 81.70 | replication factor C subunit 3-like OS=Cucumis melo OX=3656 GN=LOC103483394 PE=4... | [more] |
| A0A5A7TZV7 | 2.2e-216 | 81.76 | Replication factor C subunit 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
| A0A0A0L960 | 1.4e-213 | 80.46 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G127040 PE=4 SV=1 | [more] |
| A0A6J1IEE5 | 1.6e-182 | 71.32 | replication factor C subunit 3-like OS=Cucurbita maxima OX=3661 GN=LOC111474906 ... | [more] |
| A0A6J1G337 | 4.4e-180 | 71.59 | replication factor C subunit 3-like OS=Cucurbita moschata OX=3662 GN=LOC11145035... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G27740.1 | 3.6e-33 | 31.99 | ATPase family associated with various cellular activities (AAA) | [more] |
