Lsi05G019190 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGAATTATTGGCAGGCAGAGAAGGAGTTAGCAAAGGCAAGAGTAGAAGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTATGCCAATATTCACACCAATACCTTTGTGGCTCCCGGCGGCACCACCGCTCCCGATTGCATCGCCAACATGGCTGCCGCTCCTGGCATAACTATGGTCGGAGCCCCCGGCACAGTCGACATGGCCGGACCTCTTCCCGTTAATAAGAAGTTACTGTAAAATTCTTGTATGACGCCATAAAAAAGTTTTGTTATCTTTTCATTTGCAAAGGTACTTTGATTTGTTTTTCTACAAGTTTTTCTATTCTACCACATCTTAAAAGATGTTGTGTAGCACAATATAGAACGTAAGATTCTATTTGGTTTCATTTTCCACAACATACCTTATTCATATTTTGAGATCATTTAGATTACGTATAGTAACGATTTTGTTTTTAATTTTATGTTTTTGAAATTTATATTTATTTTCTCTAAAATTCTAAACTATAGTTTTCCCATTTGTAGAGAAGACACTTGAATATTTCTTAATCAAATTCTAAAAGTCAAAATTTACAATTTGTTTAAAAAAAAAAACATTACCTTCCGTTTGGATAAAAAAAGTTGAAATGATTTTGAATTATGTGATTTGAATTCGAAGAAATAATTTAAAATTAATTACTTTTTTTTTAACGAGAAAGATTTAAAATGAATGTATTTAAAATTATGTGTTTGGATGGTAACTAAAAAGAAAAAAAATTAAGAATTTACTAATATAGGCTCTTAACTACGATGTGTTAATTGAAAATTAGAATATGACAAGGTCAATTAAGTAATTTACTTTAAAATCCTATGAAATCTTGCAAAATTCAAGTATTTTGATTAGGAAAGTTTTTTTAAATAAAAATAGGATTTGAAATCACATCGAATTTTAAAATCATTCTCTTTCCTGCTATAACAAACAATAAAATTCATTTGAAATCTTTTATAAATTGAAATCTCTTAAAATTACTAAGTTTCAACCCGACTATTAATGTGTAAAGTAGACCACGCAAAATAAAGAAATGAGAGCTTAAAAAACATAATCGTAAATATTAAAAAAAAAATTCCTATTTAAATTCCACATAAGCTAGATAAAGAGAAGATGATCTCATGAACTGGATATTAAAATTTCAATCGCATTTAAAACAATTGAAAATAATGATTTTGAGAAACCCATAGAAAGTTATTAGTAATTTTCTTGATTAATGTATACTCATGGCTCTATAAATGAAGTGGGAATATATAAATCTAAAATATAAGAAACCAATATTTGAATTTTGATTGATTAAGAAAACTATTTTAATTTTTAATCGGTAGTTAATTTTCCTCAAAAATCCATCTTATTGGTTCTGGTTCTGGCTCTGGCATTGATTTTAACAAATTAAAATGAGCCAAATCCAACTTGTTTATTACCCTAAAAAGTTAACAAAGAGAAGAAATAAAATATATATATATATCATTTTAAAGAAAATATGAAAAAACAATCATCTTTAATTTAATTTCTTAATCAGTTATTTTTCTAAGTGGTTGGTTTTTTCCAACATTAACACAATGTTTAGACAAAATGTGACCCTTTTGTTGATCTCCCAAAAACAAATCACCCCTCATCTTTCTGTAAATGAAAAAAAAAAAAAAAGGCAAAGGATATTTTGTTTTAATTTTATAGAACTGCCTCGATATTGATCTAATTGATTTAGGGTTTTCGTTTAAAAATGACAAAATTATATGATCAAATTACAGGTTTAATCAGTAAACTAATTTTAATTTTTAACCCTTGAACTTTTAAGTTTGTGTCTAAATAGTATCACGTGTTTTTAACTTTGGGTGTTTAATAGACTTTTATGATCTATCGGTGATAGAAGTCTATCAATGTTTATCACTATTTTTTTTGTTATTTTCTGTAAATAGTTTGACATCTTTTCTATCTAGGAAAATTTTCCTAGATAGAAAAGATGTCAAACTATTTACAGAAAATAGCAATAAATCACTGATAGACATTGATAAACTTCTATCAGTCTCTATCAGTGATAGATTTTTATAATTTCTATTATTGATAGACGCTGAACTTCTATCAGCGTCTATAGCGTCTATCACAACTATCTAAAAATTTTGCTATTTTTTTTATAAATAGTTTTTTTTTTTATTTTTCTAATTTTAAAAATTTCTCTTAAAAATATAAAGATGAAAAATAATTAAAATAAATAGAAAATAGAAGGAAATTGGTTTAGAAACCTAATTAATTAATTAAGAAAAGGATTAATGCCAGAAAAACCTTTATGCTTTAACAACTTGTTCTTCAAGTCTTGCTCGCATTTGGCGCAGTGCAAGTGAACCTTAGCTGTTATTATGCGATGGATCTGCCAAGTGAAAAAAAAAACATTTAATTTAATTCAATGTTATTATTTTATTTTATTTTCATTAATCCCTTCCACAAAATTAGCGTTTGAAATGTGTTCTATATTATTATTGTAGGTGAATAATAAATGATATATATTTTTCTTAGGTGTGAGGTTCAAATTTTATTAAAAGGTATTATATATATATATATCATTTTAAAGAAAATATGAAAAAACAATCATCTTTAATTTAATTTCTTAATCAGTTATTTTTCTAAGTGGTTGGTTTTTTCCAACATTAACACAATGTTTAGACAAAATGTGACCCTTTTGTTGATCTCCCAAAAACAAATCACCCCTCATCTTTCTGTAAATGAAAAAAAAAAAAAAAAAAAAAGGCAAATGATATTTTGTTTTAATTTTATAGAACTGCCTCGATATTGATCTAATTGATTTAGGGTTTTCGTTTAAAAATGACAAAATTATATGATCAAATTACAGGTTTAATCAGTAAACTAATTTTAATTTTTAACCCTTGAACTTTTAAGTTTGTGTCTAAAAAGTATCACGTGTTTTTAACTTTGTGTGTTTAATAGACTTTTATGATCTATCGGTGATAGAAGTCTATCATGGATAAACTTTGCTATATTTGTAATTTCTTTTAAAATGTTGTTTTATACTTTGTTATTGTGATTTTCCTATAATTATATATGCTTGGGAATTGATTGATTAACATTAGTTTTTCCATATTTATTATTAGGGGTTGAAAATGTTGAAGTTGATATGGAGAAAAATGAAATTAGGGTGAAAGGTTCAAATTTGGATGTGCTCAAAATTCAGAAGCAAATAGAGAAGTTGAGCAAGAAAAGAGTTGAGTTGATTTCTCCCAAAGTGAAGCCCAAAGAGAAAGACCCTCCTAAAGCCATTGACAACAAACCCAAACCAGCCATTGTGAGTATTATTTTATTATTAATACTTAAAAAAAGTTTAATTATTCAAATTAATACTAAGTTATCAATAATCAATATTGTTAATTCCTTCAATGGATGTCCTCCAAATGTCCCCAATGAATTGATTAATTATCTTCTCCTTTCTAACTAATGTTGTATCGATTAAAATATCAATTTGGTCTGATAAGTAGTTTAAGTTTTATTCTATTTTAGTTAAGGTTCTTTTCAGTAAATCTTAAATATATATATATATATATATAATACCTTTTAATAAAATTTGAACCTCCCACCTAAGAAAATTATATATCAGTTATTATTCAGCTACAATAATAATATAGAACACATTTCAAACGCTAATTTTGTGGAAGGGATTAATGAAAATAAAATAAAATAAAATAATAACATTAAATTAAATTAAATGTTTTTTTTTTCACTTGGCAGATCCATCGCATAATAACAGCTAAGGTTCACTTGCACTGCGCCAAATGCGAGCAAGACTTGAAGAACAAGTTGTTAAAGCATAAAGGTTTTTCTGGCATTAATCCTTTTCTTAATTAATTAATTAGGTTTCTAATCCAATTTCCTTCTATTTTCTATTTATTTTAATTATTTTTCATCTTTATATTTTTAAGAGAAATTTTTAAAAATAGAAAAATAAAAAAAAAAACTATTTATAAAAAAAATAGCAAAATTTTTAGATAGTTGTGATAGACGCTATAGACGCTGATAGAAGTTCAGCGTCTATCAATAATAGAAATTATAAAAATCTATCACTGATAGAGACTGATAGAAGTTTATCAATGTCTATCAGTGATTTTTTGCTATTTTCTGTAAATAGTTTGACATCTTTTCTATCTAGGAAAATTTTCCTATTTGTTTAACAGTTTTGTTTTAGTATATGATTTTCTCATAAAAATCTATTTTAATCTCTACTACTAAAAAAAATCTCATGAGACATCACTTTAATTTATCTATTTTAAGTCACGGTGATTAAGCTTGAACTTGAGTTTATATATATTTAGAGATTAAAATCATACAAAATATTTTTAAACTGCCGACAAAGTTTTAATTATCTCCCTAAACTTTGAAATCTTCTCTTTTTAATTAATCTTTGAACTTTGAAAATAAAATTGGTATTCTCAACATCTAAGTTCAAGGATTAAAGTAAAACTTTTTAAACTTCAACTATACCAAAAATTGTTACTGAATGTCAATTTTAAGCATATCTCGATAAATTTAATCATCACTAAAAACTAATTCTTAACTTTATAAATTAAAGTAATAGATTAGTTTCAATTAAAATTTATGAAAGATTAATTTAGACATTTCAAAGTACAAGGTAACTTATAAAATTTATAAAATAAAACAAGTACTGAAGTACAAATCTAAAATTATATTTTTTAATAAAAAAAAAAGCATATTTGTTTTTTAAAAATTATGAAAAACAGCCAAAAAAAATCATGAAAAATTAAAAAACTAATTTCCTCATTTGAAGAACAATAATAATGGTTTTAATATTGGCAGGAATATACAGTGTGAAAACAGACATGAAAGCTCAAACCCTAACAATGGAAGGAAGCATTGAAGCAGAGAAGTTCAAATCTTATCTGAAGAAGAAGCTGCAGAAACACGCAGACATTACGGCCGATACGAAATTGGCCGATTCTTCCAAGCCGACGCCATCGCCGCCGGAGAAGAAGAAAGAAAATATTACTGACGAAAAAGAGAAGCCAAAAGAAAAACCTTCATCTGAAACAACGACTACTAACAAGACTATTGTTGCAGAAATTCAAATTAAAGACAATAATAATGAAATTAATAATGTTAATAATCAAAATAACGTTCCTTATTTCGTTCACTATGTCTATGCTCCTCAATTGTTCAGTGATGAAAATCCAAATGCATGTAGAGTAATGTAA ATGGTGAATTATTGGCAGGCAGAGAAGGAGTTAGCAAAGGCAAGAGTAGAAGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTATGCCAATATTCACACCAATACCTTTGTGGCTCCCGGCGGCACCACCGCTCCCGATTGCATCGCCAACATGGCTGCCGCTCCTGGCATAACTATGGTCGGAGCCCCCGGCACAGTCGACATGGCCGGACCTCTTCCCGTTAATAAGAAGTTACTGGTGAAAGGTTCAAATTTGGATGTGCTCAAAATTCAGAAGCAAATAGAGAAGTTGAGCAAGAAAAGAGTTGAGTTGATTTCTCCCAAAGTGAAGCCCAAAGAGAAAGACCCTCCTAAAGCCATTGACAACAAACCCAAACCAGCCATTATCCATCGCATAATAACAGCTAAGGTTCACTTGCACTGCGCCAAATGCGAGCAAGACTTGAAGAACAAGTTGTTAAAGCATAAAGGAATATACAGTGTGAAAACAGACATGAAAGCTCAAACCCTAACAATGGAAGGAAGCATTGAAGCAGAGAAGTTCAAATCTTATCTGAAGAAGAAGCTGCAGAAACACGCAGACATTACGGCCGATACGAAATTGGCCGATTCTTCCAAGCCGACGCCATCGCCGCCGGAGAAGAAGAAAGAAAATATTACTGACGAAAAAGAGAAGCCAAAAGAAAAACCTTCATCTGAAACAACGACTACTAACAAGACTATTGTTGCAGAAATTCAAATTAAAGACAATAATAATGAAATTAATAATGTTAATAATCAAAATAACGTTCCTTATTTCGTTCACTATGTCTATGCTCCTCAATTGTTCAGTGATGAAAATCCAAATGCATGTAGAGTAATGTAA ATGGTGAATTATTGGCAGGCAGAGAAGGAGTTAGCAAAGGCAAGAGTAGAAGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTAGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTATGCCAATATTCACACCAATACCTTTGTGGCTCCCGGCGGCACCACCGCTCCCGATTGCATCGCCAACATGGCTGCCGCTCCTGGCATAACTATGGTCGGAGCCCCCGGCACAGTCGACATGGCCGGACCTCTTCCCGTTAATAAGAAGTTACTGGTGAAAGGTTCAAATTTGGATGTGCTCAAAATTCAGAAGCAAATAGAGAAGTTGAGCAAGAAAAGAGTTGAGTTGATTTCTCCCAAAGTGAAGCCCAAAGAGAAAGACCCTCCTAAAGCCATTGACAACAAACCCAAACCAGCCATTATCCATCGCATAATAACAGCTAAGGTTCACTTGCACTGCGCCAAATGCGAGCAAGACTTGAAGAACAAGTTGTTAAAGCATAAAGGAATATACAGTGTGAAAACAGACATGAAAGCTCAAACCCTAACAATGGAAGGAAGCATTGAAGCAGAGAAGTTCAAATCTTATCTGAAGAAGAAGCTGCAGAAACACGCAGACATTACGGCCGATACGAAATTGGCCGATTCTTCCAAGCCGACGCCATCGCCGCCGGAGAAGAAGAAAGAAAATATTACTGACGAAAAAGAGAAGCCAAAAGAAAAACCTTCATCTGAAACAACGACTACTAACAAGACTATTGTTGCAGAAATTCAAATTAAAGACAATAATAATGAAATTAATAATGTTAATAATCAAAATAACGTTCCTTATTTCGTTCACTATGTCTATGCTCCTCAATTGTTCAGTGATGAAAATCCAAATGCATGTAGAGTAATGTAA MVNYWQAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKYANIHTNTFVAPGGTTAPDCIANMAAAPGITMVGAPGTVDMAGPLPVNKKLLVKGSNLDVLKIQKQIEKLSKKRVELISPKVKPKEKDPPKAIDNKPKPAIIHRIITAKVHLHCAKCEQDLKNKLLKHKGIYSVKTDMKAQTLTMEGSIEAEKFKSYLKKKLQKHADITADTKLADSSKPTPSPPEKKKENITDEKEKPKEKPSSETTTTNKTIVAEIQIKDNNNEINNVNNQNNVPYFVHYVYAPQLFSDENPNACRVM Homology
BLAST of Lsi05G019190 vs. ExPASy Swiss-Prot
Match: Q9SHQ8 (Heavy metal-associated isoprenylated plant protein 4 OS=Arabidopsis thaliana OX=3702 GN=HIPP04 PE=3 SV=2) HSP 1 Score: 154.8 bits (390), Expect = 1.5e-36 Identity = 104/238 (43.70%), Postives = 142/238 (59.66%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy Swiss-Prot
Match: Q9C5D3 (Heavy metal-associated isoprenylated plant protein 7 OS=Arabidopsis thaliana OX=3702 GN=HIPP07 PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 3.0e-16 Identity = 74/256 (28.91%), Postives = 121/256 (47.27%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy Swiss-Prot
Match: Q9ZUV1 (Heavy metal-associated isoprenylated plant protein 1 OS=Arabidopsis thaliana OX=3702 GN=HIPP01 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09 Identity = 45/136 (33.09%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy Swiss-Prot
Match: Q9M8T7 (Heavy metal-associated isoprenylated plant protein 8 OS=Arabidopsis thaliana OX=3702 GN=HIPP08 PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.6e-09 Identity = 61/217 (28.11%), Postives = 102/217 (47.00%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy Swiss-Prot
Match: Q9FJH5 (Heavy metal-associated isoprenylated plant protein 3 OS=Arabidopsis thaliana OX=3702 GN=HIPP03 PE=1 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.6e-09 Identity = 68/231 (29.44%), Postives = 108/231 (46.75%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy TrEMBL
Match: A0A0A0L4G4 (HMA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G127060 PE=3 SV=1) HSP 1 Score: 314.3 bits (804), Expect = 5.6e-82 Identity = 176/216 (81.48%), Postives = 190/216 (87.96%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy TrEMBL
Match: A0A1S3AVV8 (heavy metal-associated isoprenylated plant protein 3 OS=Cucumis melo OX=3656 GN=LOC103483396 PE=3 SV=1) HSP 1 Score: 298.5 bits (763), Expect = 3.2e-77 Identity = 166/217 (76.50%), Postives = 182/217 (83.87%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy TrEMBL
Match: A0A6J1IZ45 (heavy metal-associated isoprenylated plant protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111479765 PE=3 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 6.0e-76 Identity = 167/214 (78.04%), Postives = 182/214 (85.05%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy TrEMBL
Match: A0A6J1EFL8 (heavy metal-associated isoprenylated plant protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111432082 PE=3 SV=1) HSP 1 Score: 286.6 bits (732), Expect = 1.3e-73 Identity = 163/212 (76.89%), Postives = 179/212 (84.43%), Query Frame = 0
BLAST of Lsi05G019190 vs. ExPASy TrEMBL
Match: A0A6J1D1E3 (heavy metal-associated isoprenylated plant protein 4 OS=Momordica charantia OX=3673 GN=LOC111016109 PE=3 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 2.8e-73 Identity = 157/211 (74.41%), Postives = 177/211 (83.89%), Query Frame = 0
BLAST of Lsi05G019190 vs. NCBI nr
Match: XP_038878052.1 (heavy metal-associated isoprenylated plant protein 4 [Benincasa hispida]) HSP 1 Score: 365.2 bits (936), Expect = 5.7e-97 Identity = 190/211 (90.05%), Postives = 200/211 (94.79%), Query Frame = 0
BLAST of Lsi05G019190 vs. NCBI nr
Match: XP_004134354.1 (heavy metal-associated isoprenylated plant protein 4 [Cucumis sativus] >KAE8650278.1 hypothetical protein Csa_010815 [Cucumis sativus]) HSP 1 Score: 314.3 bits (804), Expect = 1.2e-81 Identity = 176/216 (81.48%), Postives = 190/216 (87.96%), Query Frame = 0
BLAST of Lsi05G019190 vs. NCBI nr
Match: XP_008438227.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 3 [Cucumis melo]) HSP 1 Score: 298.5 bits (763), Expect = 6.6e-77 Identity = 166/217 (76.50%), Postives = 182/217 (83.87%), Query Frame = 0
BLAST of Lsi05G019190 vs. NCBI nr
Match: XP_022980379.1 (heavy metal-associated isoprenylated plant protein 4 [Cucurbita maxima]) HSP 1 Score: 294.3 bits (752), Expect = 1.2e-75 Identity = 167/214 (78.04%), Postives = 182/214 (85.05%), Query Frame = 0
BLAST of Lsi05G019190 vs. NCBI nr
Match: XP_023528992.1 (heavy metal-associated isoprenylated plant protein 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290.4 bits (742), Expect = 1.8e-74 Identity = 164/212 (77.36%), Postives = 180/212 (84.91%), Query Frame = 0
BLAST of Lsi05G019190 vs. TAIR 10
Match: AT1G29000.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 154.8 bits (390), Expect = 1.1e-37 Identity = 104/238 (43.70%), Postives = 142/238 (59.66%), Query Frame = 0
BLAST of Lsi05G019190 vs. TAIR 10
Match: AT5G50740.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-19 Identity = 71/227 (31.28%), Postives = 119/227 (52.42%), Query Frame = 0
BLAST of Lsi05G019190 vs. TAIR 10
Match: AT5G50740.3 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 94.7 bits (234), Expect = 1.3e-19 Identity = 71/227 (31.28%), Postives = 119/227 (52.42%), Query Frame = 0
BLAST of Lsi05G019190 vs. TAIR 10
Match: AT5G63530.1 (farnesylated protein 3 ) HSP 1 Score: 87.4 bits (215), Expect = 2.2e-17 Identity = 74/256 (28.91%), Postives = 121/256 (47.27%), Query Frame = 0
BLAST of Lsi05G019190 vs. TAIR 10
Match: AT5G63530.2 (farnesylated protein 3 ) HSP 1 Score: 87.4 bits (215), Expect = 2.2e-17 Identity = 74/256 (28.91%), Postives = 121/256 (47.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|