Lsi05G018820 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGAGATTGAATCAATTGGAGAAAAGGGAATGAGAATTTGATTCAAACAGAGATGAAAGTCAACAATTCTCCGAGAAATTCAAATCTTCTCAACACACTCAAACCCTTGATCATTCTAGGGTTCATTTTTTCCTTGCTATCTACCCATACAGTTCTCGCCAAATCGCGCCGTCCAGTTACTGTAAGTTTTCTTCGTCTTCTCGGATCGTAATTTTCTTCATCTTCACTTGATTCTACTGAATCGTATTTCGATTATTCAGGATGCTGAAACCAGGCAAAAGAAGCAGGAGTGTTACGCCGATATCGAGAGGTGAGCGTTTACTTCAAGCTATTTTTAGGGTTTTTCCCCCCTCTCTCTCTTGAATCGAGTGTAGTTGAAAAATGATCTGAGAGCAACTCAGGAATGTGATTTCTCCTTCCTTTTTACATCATACCTGCTACTGCTTTGATTGTTTACGATAATGTGTTGAAAATGTGCAGCGGATTGTGGGGTTGGCAATGCAGATCTTCAGCTACCGAAAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTATGATCTAGTTTATGGCAGTGATCCGGTGAGCGAATGTTCTTATTGTTACGTGCGCGTATTTCTCTGGCTGTTCTTCTTTAATTGCTAAGCCTAACGTTGGATTTGTGTTCATGTAGCTCGAGGAAGGAGAGAAGGACCTTGCTAGGAGTCAAGAGTATAAGTATTGTATATATAAGTAAGTACATAACTTTTGTTCAATTTTCCAGAAAAGAAAGTATTGGTTTCCTATCCGGAAGAAGACATGGGTCGATATTGGACGATTTTGGTTATAAGAAACTTTTAAACATTTCGTGTTCGCTGTTCTCCTTTCCTTCTTTCCACCGTTCACTTCATCCTCCAACCATTTGAATAGGAATTCGAAAATGTTTTTACTTTGGTTCACTAGTTCATATAATATGTTCTTAATCCAGTCTTCAAATGCTATGCCCATGGAATAGAGATTGTTTGTAAGGAGCTTTGACATCGTATACTGCATTGGTTTGCCTTCGAATGGATGGAAAGGAATTTAGCCACTGCTTATATTCTAGTTGCTACTTAACTCACTGAGAAGCTATAGTATATAATTTACTATACATAACTAATATTTTTTGAGTGCTATCAAATCAGAGATCTCCCACCATGCTTAGATCCGATTTTGAATTTTTAATCATTCGAGATTCGAAATGGTATCCTATTATATCTGGACTTCATTATTAATCTTTGCCCTTTTGTAATTTCATTTGATCAACGAAATCATTACCGATGTTTCTCATAAAAAAGATATATGTATATAAGGACTTCATTCTTTCCCTCTTTTGTGAGCTCAGTTGATTCTGACCATTAGTTTATAACCCATTAACGAGTATTTAGTTTACGATCTTTCGCTGGACCTTGTTAAATCATAAATGTGTATTTAATTATAGGGGATCTAAGGTGCTTGCATATGATGGACCCCATTCCCCAACGCAACACTTCCCAATACGTCTATCATTTGCTTTTATTCTCTTCTCCTCTTCTTTATTTTCTGAGGAGCATTAAGCTAGAAGAGTATTCTTTGTACTGCGTTTACTTCAACTTTATCCTTGAGTTTTAAGTAGGTATTCTTAGTCTGGTTGAGCTCCCTTGGGGTGTTTGGCCCAAGGAGTTGGAAGAGTAGAAGTTAGAGGAGTTGAGTTGTTTGGCCCACGGAGTTCGTAGATCCCAGGACTAAAATATTTCAATTTTATGTCATATTAACTCCTTATACTAAGGAGTTCATAACTCTCCAAACTTTACAACTCCACTTCTGCACGAAGACTTAGTAGGTGGTTTTCAACTATATGTCGTTTTAGTTAGATTGTGCATCTTGAGTCGAGAGAAAAAGTATCATACATGCATTTCGATCTAATTGATTACACATTTGCTTGTCAATTATATTTCAATTTCAATTGATATTTGAAATTTGACTTAACATTGATGAACCTTATAGACTTTCAGTATTTGGGATTTGTTGAATTTAAAGTTTCGAAAAAATTGGTTGAGAGAACCAGTTAAGTGTGAAAGCTTTGTTTGCTTGCAGGTTGTCGATGGGGGAGAGTCTGGAGGGTATTAAGGGCTCCTTTGACTACTGA AGAGATTGAATCAATTGGAGAAAAGGGAATGAGAATTTGATTCAAACAGAGATGAAAGTCAACAATTCTCCGAGAAATTCAAATCTTCTCAACACACTCAAACCCTTGATCATTCTAGGGTTCATTTTTTCCTTGCTATCTACCCATACAGTTCTCGCCAAATCGCGCCGTCCAGTTACTGATGCTGAAACCAGGCAAAAGAAGCAGGAGTGTTACGCCGATATCGAGAGCGGATTGTGGGGTTGGCAATGCAGATCTTCAGCTACCGAAAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTATGATCTAGTTTATGGCAGTGATCCGCTCGAGGAAGGAGAGAAGGACCTTGCTAGGAGTCAAGAGTATAAGTATTGTATATATAAGTTGTCGATGGGGGAGAGTCTGGAGGGTATTAAGGGCTCCTTTGACTACTGA ATGAAAGTCAACAATTCTCCGAGAAATTCAAATCTTCTCAACACACTCAAACCCTTGATCATTCTAGGGTTCATTTTTTCCTTGCTATCTACCCATACAGTTCTCGCCAAATCGCGCCGTCCAGTTACTGATGCTGAAACCAGGCAAAAGAAGCAGGAGTGTTACGCCGATATCGAGAGCGGATTGTGGGGTTGGCAATGCAGATCTTCAGCTACCGAAAAGGAAAATTGTGCCCTGCGATGTCTTTCTCCTACTTGTTATGATCTAGTTTATGGCAGTGATCCGCTCGAGGAAGGAGAGAAGGACCTTGCTAGGAGTCAAGAGTATAAGTATTGTATATATAAGTTGTCGATGGGGGAGAGTCTGGAGGGTATTAAGGGCTCCTTTGACTACTGA MKVNNSPRNSNLLNTLKPLIILGFIFSLLSTHTVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCRSSATEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGESLEGIKGSFDY Homology
BLAST of Lsi05G018820 vs. ExPASy TrEMBL
Match: A0A5D3D394 (Protein OS-9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003100 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.1e-66 Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of Lsi05G018820 vs. ExPASy TrEMBL
Match: A0A1S3AW07 (uncharacterized protein LOC103483444 OS=Cucumis melo OX=3656 GN=LOC103483444 PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.1e-66 Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of Lsi05G018820 vs. ExPASy TrEMBL
Match: A0A0A0L9A0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129480 PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 5.3e-66 Identity = 124/131 (94.66%), Postives = 127/131 (96.95%), Query Frame = 0
BLAST of Lsi05G018820 vs. ExPASy TrEMBL
Match: A0A6J1E8P8 (uncharacterized protein LOC111431806 OS=Cucurbita moschata OX=3662 GN=LOC111431806 PE=4 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 2.6e-65 Identity = 121/131 (92.37%), Postives = 129/131 (98.47%), Query Frame = 0
BLAST of Lsi05G018820 vs. ExPASy TrEMBL
Match: A0A6J1IZB5 (uncharacterized protein LOC111479810 OS=Cucurbita maxima OX=3661 GN=LOC111479810 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 3.8e-64 Identity = 119/131 (90.84%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of Lsi05G018820 vs. NCBI nr
Match: XP_038899863.1 (uncharacterized protein LOC120087079 [Benincasa hispida]) HSP 1 Score: 262.3 bits (669), Expect = 2.2e-66 Identity = 126/131 (96.18%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of Lsi05G018820 vs. NCBI nr
Match: XP_008438284.1 (PREDICTED: uncharacterized protein LOC103483444 [Cucumis melo] >KAA0049118.1 Protein OS-9 [Cucumis melo var. makuwa] >TYK17446.1 Protein OS-9 [Cucumis melo var. makuwa]) HSP 1 Score: 260.4 bits (664), Expect = 8.4e-66 Identity = 123/131 (93.89%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of Lsi05G018820 vs. NCBI nr
Match: XP_004133969.1 (uncharacterized protein LOC101207062 [Cucumis sativus] >KGN56691.1 hypothetical protein Csa_010151 [Cucumis sativus]) HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65 Identity = 124/131 (94.66%), Postives = 127/131 (96.95%), Query Frame = 0
BLAST of Lsi05G018820 vs. NCBI nr
Match: XP_022924279.1 (uncharacterized protein LOC111431806 [Cucurbita moschata]) HSP 1 Score: 257.7 bits (657), Expect = 5.5e-65 Identity = 121/131 (92.37%), Postives = 129/131 (98.47%), Query Frame = 0
BLAST of Lsi05G018820 vs. NCBI nr
Match: XP_022980443.1 (uncharacterized protein LOC111479810 [Cucurbita maxima]) HSP 1 Score: 253.8 bits (647), Expect = 7.9e-64 Identity = 119/131 (90.84%), Postives = 128/131 (97.71%), Query Frame = 0
BLAST of Lsi05G018820 vs. TAIR 10
Match: AT5G17610.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 168.3 bits (425), Expect = 4.1e-42 Identity = 75/109 (68.81%), Postives = 87/109 (79.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
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