Lsi05G018790 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G018790
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	RING-type E3 ubiquitin transferase
Location	chr05: 25975125 .. 25976264 (-)
RNA-Seq Expression	Lsi05G018790
Synteny	Lsi05G018790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCTGTAGGAAACTCAAATCAATGGCAGCCATATGCTTACAAAGATTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAATGGTGTTACATCATCTTTCCACCACCTCCACCTTTTGGCTATGGCAGCAATGGAGATTCTGGCACTGATTTCTCTCCACTTATCATCGCCATCATTGGTATCTTGGCCAGCGCCTTCATTTTGGTAAGTTACTACACCATCATCTCCAAGTATTGCAGGAACAGAAATTCCACCTCTAACGCCGCCATGGAAATGGAGGATGAAGAAAATCTTTCCCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCTTCCACCTCCAGGCTTGGACGAGGCTCTCATCAAATCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACTGATTGCTCAGTTTGCCTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGACTGCTCCCAAAGTGTAGCCATGCCTTTCATCTTCCTTGCATTGACACATGGCTTAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAATATTTCACCAACCAATCTTTTCCCATTCCCAACTCAAGAAATTCAAACAACACAACATTTAGTTTCATCTGCTTTTCAGTATCAGCATCAGCACAGAACCAATGACACAGTAGTTGTTGTAGTGGTTCAAGATTTGCAGGATTTAACAGAAGTGAGGCAAGAAACTGCTGATTCTAGGCTTGAAAATGATGATGCTTACAAGAATCAAAGGCAATGTTTTGCATCAGAGAGTCAAAATTCAGAGGCAAGAGACAGAATGAATCAAGTTAGACAGGAATATGATGTTGAGGATGGTGTTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATATTGAGAGCCAGTCAAGATAGTGAGGAAGAGGTAGAGGAAGATGAATTACAGCAAATGGGAATTGGATCATCAAAAGTATTTGTTCAAGAACATTCCCATTCCAATCACAAAACTGGGGTTTCCAACTTGGGAATGAATAGATCTATTTCAACTGGGAAACTGGGTTTTACAAACTATGGGAAAGGAAAGAGTTGCATCATTCCCAGTTGA

mRNA sequence

ATGGGTTCTGTAGGAAACTCAAATCAATGGCAGCCATATGCTTACAAAGATTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAATGGTGTTACATCATCTTTCCACCACCTCCACCTTTTGGCTATGGCAGCAATGGAGATTCTGGCACTGATTTCTCTCCACTTATCATCGCCATCATTGGTATCTTGGCCAGCGCCTTCATTTTGGTAAGTTACTACACCATCATCTCCAAGTATTGCAGGAACAGAAATTCCACCTCTAACGCCGCCATGGAAATGGAGGATGAAGAAAATCTTTCCCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCTTCCACCTCCAGGCTTGGACGAGGCTCTCATCAAATCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACTGATTGCTCAGTTTGCCTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGACTGCTCCCAAAGTGTAGCCATGCCTTTCATCTTCCTTGCATTGACACATGGCTTAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAATATTTCACCAACCAATCTTTTCCCATTCCCAACTCAAGAAATTCAAACAACACAACATTTAGTTTCATCTGCTTTTCAGTATCAGCATCAGCACAGAACCAATGACACAGTAGTTGTTGTAGTGGTTCAAGATTTGCAGGATTTAACAGAAGTGAGGCAAGAAACTGCTGATTCTAGGCTTGAAAATGATGATGCTTACAAGAATCAAAGGCAATGTTTTGCATCAGAGAGTCAAAATTCAGAGGCAAGAGACAGAATGAATCAAGTTAGACAGGAATATGATGTTGAGGATGGTGTTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATATTGAGAGCCAGTCAAGATAGTGAGGAAGAGGTAGAGGAAGATGAATTACAGCAAATGGGAATTGGATCATCAAAAGTATTTGTTCAAGAACATTCCCATTCCAATCACAAAACTGGGGTTTCCAACTTGGGAATGAATAGATCTATTTCAACTGGGAAACTGGGTTTTACAAACTATGGGAAAGGAAAGAGTTGCATCATTCCCAGTTGA

Coding sequence (CDS)

ATGGGTTCTGTAGGAAACTCAAATCAATGGCAGCCATATGCTTACAAAGATTGTTCTTTAGAGATTTGCAGCATATATTGCCCTCAATGGTGTTACATCATCTTTCCACCACCTCCACCTTTTGGCTATGGCAGCAATGGAGATTCTGGCACTGATTTCTCTCCACTTATCATCGCCATCATTGGTATCTTGGCCAGCGCCTTCATTTTGGTAAGTTACTACACCATCATCTCCAAGTATTGCAGGAACAGAAATTCCACCTCTAACGCCGCCATGGAAATGGAGGATGAAGAAAATCTTTCCCAAATCCGCCATGAAAACCAGCTCCAAGCTCCTCTTCCACCTCCAGGCTTGGACGAGGCTCTCATCAAATCCATCACAGTCTGCAAGTACAAAAGAGGAGATGGGTTAGTTGAAGGCACTGATTGCTCAGTTTGCCTGAGTGAGTTTGAAGAAAATGAGAGCTTAAGACTGCTCCCAAAGTGTAGCCATGCCTTTCATCTTCCTTGCATTGACACATGGCTTAAATCTCACTCAACTTGCCCTCTCTGCCGCTCCAATATTTCACCAACCAATCTTTTCCCATTCCCAACTCAAGAAATTCAAACAACACAACATTTAGTTTCATCTGCTTTTCAGTATCAGCATCAGCACAGAACCAATGACACAGTAGTTGTTGTAGTGGTTCAAGATTTGCAGGATTTAACAGAAGTGAGGCAAGAAACTGCTGATTCTAGGCTTGAAAATGATGATGCTTACAAGAATCAAAGGCAATGTTTTGCATCAGAGAGTCAAAATTCAGAGGCAAGAGACAGAATGAATCAAGTTAGACAGGAATATGATGTTGAGGATGGTGTTGTTCAGCCATTTAGAAGGTCAGTTTCCTTGAATTCTTTATCATGGCAAGGGCAGGTTTCTGTTGCTGATATATTGAGAGCCAGTCAAGATAGTGAGGAAGAGGTAGAGGAAGATGAATTACAGCAAATGGGAATTGGATCATCAAAAGTATTTGTTCAAGAACATTCCCATTCCAATCACAAAACTGGGGTTTCCAACTTGGGAATGAATAGATCTATTTCAACTGGGAAACTGGGTTTTACAAACTATGGGAAAGGAAAGAGTTGCATCATTCCCAGTTGA

Protein sequence

MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAIIGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLPPPGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVRQETADSRLENDDAYKNQRQCFASESQNSEARDRMNQVRQEYDVEDGVVQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRSISTGKLGFTNYGKGKSCIIPS

Homology

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BLAST of Lsi05G018790 vs. ExPASy Swiss-Prot
Match: Q9LF64 (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 3.2e-68
Identity = 166/401 (41.40%), Postives = 227/401 (56.61%), Query Frame = 0


Query: 6   NSNQWQPY-AYKDCSLEICSIYCPQWCYIIFPPPPP--FGYGSNGDSGTDFSPLIIAIIG 65
           N N W PY +Y DCS  IC+IYCPQWCY+IFPPPPP  F    +  S + FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLPPPGLDEAL 125
           IL SA ILVSYYT+ISKYC   + TS++  E  +  +  +    +  +      GL+E++
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQTSSS--ETLNLNHNGEGFFSSTQRISTNGDGLNESM 123

Query: 126 IKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCP 185
           IKSITV KYK GDG V+G+DCSVCLSEFEENESLRLLPKC+HAFHLPCIDTWLKSHS CP
Sbjct: 124 IKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCP 183

Query: 186 LCRSNISPTNLFPFPTQEI-QTTQHLVSSAFQYQHQ---------------HRTNDTVVV 245
           LCR+ ++  N    PT  + Q    +V++     HQ                +T D   V
Sbjct: 184 LCRAFVTGVN---NPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSV 243

Query: 246 VVVQDLQDLTEVRQETADSRLENDDAYKNQRQCFASESQNSEARDRMNQVRQEYDVEDGV 305
           VV++DL+                              S+NS+AR  +    +  + +D  
Sbjct: 244 VVIEDLE----------------------------IGSRNSDARSELQLPEERRETKDED 303

Query: 306 VQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEH----- 365
             P RRSVSLNS      VS+AD+LR       E+E++E +  G+G+S+   +       
Sbjct: 304 SLPIRRSVSLNS---GVVVSIADVLR-------EIEDEEGESGGVGTSQRREEGEDGDGK 361

Query: 366 ----SHSNHKTGVSNLGMNRSISTGKLGFTNYGKGKSCIIP 379
               + +N ++G  +    RS+STG+  F+ Y +G++  +P
Sbjct: 364 TIPPTEANQRSGGVSGFFVRSLSTGRFIFSRYDRGRNYRLP 361

[Close]

BLAST of Lsi05G018790 vs. ExPASy Swiss-Prot
Match: Q9SRQ8 (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-67
Identity = 177/407 (43.49%), Postives = 229/407 (56.27%), Query Frame = 0


Query: 1   MGSVGNSNQWQPY--AYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGD-SGTDFSPLI 60
           MGS GN N W     +Y+DCS  +CS+YCPQWCY+IFPPPP F      D S +DFSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFILVSYYTIISKYC----RNRNSTSNAAMEMEDEENLSQIRHENQLQAPL 120
           IA+IGILASAFILVSYYT+ISKYC     N +STS AA+     +   Q  + N      
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 PP---------PGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 180
            P          GLDE+LIKSITV KY++ DG VE +DCSVCLSEF+ENESLRLLPKC+H
Sbjct: 121 NPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLPCIDTWLKSHSTCPLCRSNI---SPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTN 240
           AFH+PCIDTWLKSHS CPLCR+ I   S   +     Q+I T  + +S          T 
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSIS----------TG 240

Query: 241 DTVVVVVVQDLQDLTEVRQETADSRLENDDAYKNQRQCFASESQNSEARDRMNQVRQEYD 300
           D  VVVV  DL+          +SR  N             E+ N  +  +  +++   D
Sbjct: 241 DDSVVVVNLDLE----------NSRSRN-------------ETVNEGSTPKPPEMQDSRD 300

Query: 301 VEDGVVQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQE- 360
            E+      RRS SLN  S  G VS+ADILR       E+E+DE +  G+G+S+ +V+E 
Sbjct: 301 GEE------RRSASLN--SGGGVVSIADILR-------EIEDDE-ESAGVGTSR-WVEEG 355

Query: 361 ---------HSHSNHKTGVSNLGMNRSISTGKLGFTNYGKGKSCIIP 379
                     S +N   G+SN  +  S++  K   + Y + K+  +P
Sbjct: 361 EGEKTPPPSGSAANQTNGISNFLVRSSMAAMKR--SGYDRAKNYRLP 355

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BLAST of Lsi05G018790 vs. ExPASy Swiss-Prot
Match: Q7XLY8 (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 1.1e-57
Identity = 149/343 (43.44%), Postives = 185/343 (53.94%), Query Frame = 0


Query: 10  WQPY-AYKDCSLEICSIYCPQWCYIIFPPPPPF---GYGSNGDSGTDFSPLIIAIIGILA 69
           W PY   +DCS  +CS+YCPQWCY IFPPPPPF   G  ++  SG  FSPL+IAIIG+LA
Sbjct: 8   WVPYEPTRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLA 67

Query: 70  SAFILVSYYTIISKYC------RNRNSTSNAAMEMEDEENLSQIRH------ENQLQAPL 129
           SAF+LVSYYT ISKYC      R R   S++          S  RH       ++     
Sbjct: 68  SAFLLVSYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVS 127

Query: 130 PPPGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDT 189
           PP GLDE LI  ITVCKY+RGDG V  TDCSVCL EF + ESLRLLP+CSHAFH  CIDT
Sbjct: 128 PPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDT 187

Query: 190 WLKSHSTCPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQ 249
           WLKSHS CPLCR+NI+      F T  + + +               N   VVVV+  L+
Sbjct: 188 WLKSHSNCPLCRANIT------FVTVGLASPE---PEGCAPGETGGDNTHEVVVVMDGLE 247

Query: 250 DLTEVRQETADSRLENDDAYKNQRQCFASESQNSEARDRMNQVRQEYDVEDGVVQPFRRS 309
           +L E +QE        DD +  +      E  N  A  R          E+G   P +R 
Sbjct: 248 NLCEEQQEAVSRASTADDDHDAKDVAEGMEEANGAAEIR----------EEG--SPPKRG 307

Query: 310 VSLNSLSWQGQVSVADILRASQDSE-EEVEEDELQQMGIGSSK 336
            S   L    ++ +AD+L+ S + E     E  L   G G+S+
Sbjct: 308 ASSFDLHRDNRMCIADVLQESMEDELTAARESGLLAGGAGTSR 329

[Close]

BLAST of Lsi05G018790 vs. ExPASy Swiss-Prot
Match: P0C041 (Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 PE=3 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 2.0e-41
Identity = 90/201 (44.78%), Postives = 118/201 (58.71%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAY-KDCSLEICSIYCPQWCYIIFPPPPPFGY----GSNGDSGTDFSP 60
           M S  N + W  Y   +DC+  +CS +CPQWC  I   PPP  Y         S  + SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LIIAIIGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIR------HENQL 120
           L+IAI GI A+AF+L +YYT++SKYC N ++T+ AA E    + +  +        ++  
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCAN-DTTNEAASESGRSDIILDVNSPERGDQDDPF 120

Query: 121 QAPLPPPGLDEALIKSITVCKYKRGDG--LVEGTDCSVCLSEFEENESLRLLPKCSHAFH 180
                  GLD+ LIK I   K K+      + GTDCS+CL EF E+ESLRLLPKC+H FH
Sbjct: 121 ALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFH 180

Query: 181 LPCIDTWLKSHSTCPLCRSNI 189
           + CID WLKSHS CPLCR+ I
Sbjct: 181 VVCIDRWLKSHSNCPLCRAKI 200

[Close]

BLAST of Lsi05G018790 vs. ExPASy Swiss-Prot
Match: Q8LFY8 (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 5.9e-30
Identity = 116/392 (29.59%), Postives = 183/392 (46.68%), Query Frame = 0


Query: 17  DCSLEICSIYCPQWC------YIIFPPPPPFG----------------YGSNGDSGTDFS 76
           DCS  +C   CP  C      Y I P  PP+                 Y  + DS +   
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 77  PLIIAIIGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLP 136
            + I  I     A +L  ++ +   +  + N  +    + ++E+N + +  E Q +  + 
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 137 PP-------GLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFH 196
            P       GL +++I SIT+C YKRGDGL+E TDC VCL+EFEE+ESLRLLPKC+HAFH
Sbjct: 142 HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFH 201

Query: 197 LPCIDTWLKSHSTCPLCRSNISPTNL-FPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVV 256
           + CIDTWL SH+ CPLCR+ I+  ++  P  +  ++ T     S       H  ND V  
Sbjct: 202 ISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGS-------HLENDGV-- 261

Query: 257 VVVQDLQDLTEVRQETADSRLENDDA-YKNQRQCFASESQNS--EARDRMNQVRQEYDVE 316
               D +D  E+         E+DD+  + +   F S+   S  E ++R+  +++  D  
Sbjct: 262 ----DEEDHGEIENRVDSDFKESDDSDIRIEIYRFDSDGDGSETETKERVRVLKECMDPN 321

Query: 317 DGVVQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSH 375
            G         S+NSLS   +  V  +    +  E + EE          ++   ++ + 
Sbjct: 322 GG--------DSVNSLS-HTKTHVESVDFPGKSCENQSEE---------FTRHNGEDEAS 381

[Close]

BLAST of Lsi05G018790 vs. ExPASy TrEMBL
Match: A0A5D3D2D1 (RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003080 PE=3 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 3.5e-195
Identity = 354/381 (92.91%), Postives = 359/381 (94.23%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQA-PLPPPGLD 120
           IGILASAFILVSYYTIISKYCRNR STSN AMEMEDEENLSQIRHENQLQA PLPPPGLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENLSQIRHENQLQAPPLPPPGLD 120

Query: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVR 240
           TCPLCRSNISPTNLF   TQEIQ TQH VSSAFQYQHQHRTNDTV+VVVVQDL DLT VR
Sbjct: 181 TCPLCRSNISPTNLFSTATQEIQ-TQHFVSSAFQYQHQHRTNDTVLVVVVQDLDDLTVVR 240

Query: 241 QETADSRLENDDA-YKNQRQCFASESQNSEARDRMNQVRQEYDVEDGVVQPFRRSVSLNS 300
           QET  SRLENDDA  KNQR+ +ASESQNS  R+RMNQVRQEYDV DGVVQPFRRSVSLNS
Sbjct: 241 QETVVSRLENDDASSKNQREGYASESQNSGERERMNQVRQEYDVVDGVVQPFRRSVSLNS 300

Query: 301 LSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRS 360
           LSWQG VSVADILR SQDSEEEVEEDELQQMGIGSSKVFVQE SHSNH+TGVSNLGMNRS
Sbjct: 301 LSWQGPVSVADILRVSQDSEEEVEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMNRS 360

Query: 361 ISTGKLGFTNYGKGKSCIIPS 380
           ISTGKLGFTNYGKGKSCIIPS
Sbjct: 361 ISTGKLGFTNYGKGKSCIIPS 380

[Close]

BLAST of Lsi05G018790 vs. ExPASy TrEMBL
Match: A0A1S3AW58 (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103483448 PE=3 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 3.5e-195
Identity = 354/381 (92.91%), Postives = 359/381 (94.23%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQA-PLPPPGLD 120
           IGILASAFILVSYYTIISKYCRNR STSN AMEMEDEENLSQIRHENQLQA PLPPPGLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENLSQIRHENQLQAPPLPPPGLD 120

Query: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVR 240
           TCPLCRSNISPTNLF   TQEIQ TQH VSSAFQYQHQHRTNDTV+VVVVQDL DLT VR
Sbjct: 181 TCPLCRSNISPTNLFSTATQEIQ-TQHFVSSAFQYQHQHRTNDTVLVVVVQDLDDLTVVR 240

Query: 241 QETADSRLENDDA-YKNQRQCFASESQNSEARDRMNQVRQEYDVEDGVVQPFRRSVSLNS 300
           QET  SRLENDDA  KNQR+ +ASESQNS  R+RMNQVRQEYDV DGVVQPFRRSVSLNS
Sbjct: 241 QETVVSRLENDDASSKNQREGYASESQNSGERERMNQVRQEYDVVDGVVQPFRRSVSLNS 300

Query: 301 LSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRS 360
           LSWQG VSVADILR SQDSEEEVEEDELQQMGIGSSKVFVQE SHSNH+TGVSNLGMNRS
Sbjct: 301 LSWQGPVSVADILRVSQDSEEEVEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMNRS 360

Query: 361 ISTGKLGFTNYGKGKSCIIPS 380
           ISTGKLGFTNYGKGKSCIIPS
Sbjct: 361 ISTGKLGFTNYGKGKSCIIPS 380

[Close]

BLAST of Lsi05G018790 vs. ExPASy TrEMBL
Match: A0A0A0L405 (RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G129520 PE=3 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 6.0e-195
Identity = 352/382 (92.15%), Postives = 360/382 (94.24%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQA-PLPPPGLD 120
           IGILASAFILVSYYTIISKYCRNR STSN AMEMEDEEN+SQIRHENQLQA PLPPPGLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENISQIRHENQLQAPPLPPPGLD 120

Query: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVR 240
           TCPLCRSNISPTNLF  PTQEIQTTQH VSSAFQYQHQHRTNDT+VVVVVQDL DLT VR
Sbjct: 181 TCPLCRSNISPTNLFSTPTQEIQTTQHFVSSAFQYQHQHRTNDTIVVVVVQDLDDLTVVR 240

Query: 241 QETADSRLENDDA-YKNQRQCFASESQNSEARDRMNQVRQEYD-VEDGVVQPFRRSVSLN 300
           QET DSRLENDDA  KNQR+  A+ESQ S AR+RMNQVRQEYD V DGVV+PFRRSVSLN
Sbjct: 241 QETVDSRLENDDASSKNQREGCAAESQISGARERMNQVRQEYDVVVDGVVEPFRRSVSLN 300

Query: 301 SLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNR 360
           SLSWQGQVSVADILR SQDSEEE EEDELQQMGIGSSKVFVQE SHSNH+TGVSNLGMNR
Sbjct: 301 SLSWQGQVSVADILRVSQDSEEEAEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMNR 360

Query: 361 SISTGKLGFTNYGKGKSCIIPS 380
           SISTGKLGFTNYGKGKSCII S
Sbjct: 361 SISTGKLGFTNYGKGKSCIISS 382

[Close]

BLAST of Lsi05G018790 vs. ExPASy TrEMBL
Match: A0A6J1D151 (RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC111016068 PE=3 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 6.9e-175
Identity = 325/380 (85.53%), Postives = 346/380 (91.05%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYG+NGDSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGNNGDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLPPPGLDE 120
           IGILASAFILVSYYTIISKYCRNR +T++AAMEM+DEENL+QIRHENQLQA  PP GLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRAATTSAAMEMDDEENLAQIRHENQLQA--PPAGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKY RGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYIRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVRQ 240
           CPLCRSNISPTNLFP PTQEIQ T+H+ ++A QY  QHR+NDTVVVVVVQDLQDLT V Q
Sbjct: 181 CPLCRSNISPTNLFPPPTQEIQRTEHINAAALQY--QHRSNDTVVVVVVQDLQDLT-VSQ 240

Query: 241 ETADSRLENDDA-YKNQRQCFASESQNSEARDRMNQVRQEYDVEDGVVQPFRRSVSLNSL 300
           +TA   +END A  KNQRQ FAS SQ+SE RDRM QVR++ DV   VVQPFRRSVSL+S 
Sbjct: 241 QTAVLGIENDGASSKNQRQSFASVSQDSEPRDRMIQVRED-DVVGDVVQPFRRSVSLDSF 300

Query: 301 SWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRSI 360
           SWQGQVSVADILR SQDSEEEVEEDE+ QMGIGSSKVFVQEH  SNHK GVSNLGMNRS+
Sbjct: 301 SWQGQVSVADILRESQDSEEEVEEDEM-QMGIGSSKVFVQEHFQSNHKNGVSNLGMNRSV 360

Query: 361 STGKLGFTNYGKGKSCIIPS 380
           STG+LGFTNY KGKSCIIPS
Sbjct: 361 STGRLGFTNYEKGKSCIIPS 373

[Close]

BLAST of Lsi05G018790 vs. ExPASy TrEMBL
Match: A0A6J1IC58 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111473464 PE=3 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 6.3e-168
Identity = 318/382 (83.25%), Postives = 337/382 (88.22%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY+DCSLEICSIYCPQWCYIIFPPPPPFGYG+N DSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGTNSDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLPPPGLDE 120
           IGILASAFILVSYYTIISKYCRNR +TSN+ MEM+DEENLSQIRHENQLQAPLPP GLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRAATSNSNMEMDDEENLSQIRHENQLQAPLPPAGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVRQ 240
           CPLCRSNISP NLFP PTQEIQ T+HL  +++ +Q+QHR+NDTVVVVVVQDL DL    Q
Sbjct: 181 CPLCRSNISPINLFPPPTQEIQRTEHL--NSYNFQYQHRSNDTVVVVVVQDLPDLPVSSQ 240

Query: 241 ETADSRLENDD-AYKNQRQCFASESQNSEARDRM-NQVRQEYDVEDGVVQPFRRSVSLNS 300
           ETA   LEND  + KNQRQ F S++Q+SE R+ M +QVRQ     D  VQPFRRSVSLNS
Sbjct: 241 ETAVLGLENDGVSSKNQRQSFVSDNQDSEPRNIMIHQVRQ-----DDAVQPFRRSVSLNS 300

Query: 301 LSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRS 360
           LSWQGQVSVADILRASQDSEEEVEEDEL QMGIGSSK FVQE  HS     VSNL M+RS
Sbjct: 301 LSWQGQVSVADILRASQDSEEEVEEDEL-QMGIGSSKAFVQEDCHSR----VSNLEMHRS 360

Query: 361 ISTGKLGFTNYG--KGKSCIIP 379
           ISTGKLGFTNYG  KGKSCIIP
Sbjct: 361 ISTGKLGFTNYGNWKGKSCIIP 370

[Close]

BLAST of Lsi05G018790 vs. NCBI nr
Match: XP_038901021.1 (RING-H2 finger protein ATL52-like [Benincasa hispida])

HSP 1 Score: 693.7 bits (1789), Expect = 8.6e-196
Identity = 352/380 (92.63%), Postives = 358/380 (94.21%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLPPPGLDE 120
           IGILASAFILVSYYTIISKYCRNR STSNAAMEMEDEENLSQIRHEN LQAP PPPGLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNAAMEMEDEENLSQIRHENHLQAPPPPPGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVRQ 240
           CPLCRSNISPTNLFP PTQEIQTTQH VSS F YQHQHRTNDTVVVVVVQDLQ  T VRQ
Sbjct: 181 CPLCRSNISPTNLFPPPTQEIQTTQHFVSSDFLYQHQHRTNDTVVVVVVQDLQGSTVVRQ 240

Query: 241 ETADSRLENDDA-YKNQRQCFASESQNSEARDRMNQVRQEYDVEDGVVQPFRRSVSLNSL 300
           E ADSRL+ND A  KNQR+ FAS+SQNSEARDRMNQVRQEYDV DGVV PFRRSVSLNSL
Sbjct: 241 EMADSRLDNDYASSKNQREDFASDSQNSEARDRMNQVRQEYDVLDGVVHPFRRSVSLNSL 300

Query: 301 SWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRSI 360
           SW+GQVSVADILR SQDSEEEVEEDELQQMGIGSS+VFVQEHS+ NHK GVSN GMNRSI
Sbjct: 301 SWEGQVSVADILRVSQDSEEEVEEDELQQMGIGSSEVFVQEHSNYNHKPGVSNSGMNRSI 360

Query: 361 STGKLGFTNYGKGKSCIIPS 380
           STGKLGFTNYGKGKSCI PS
Sbjct: 361 STGKLGFTNYGKGKSCINPS 380

[Close]

BLAST of Lsi05G018790 vs. NCBI nr
Match: XP_008438300.1 (PREDICTED: RING-H2 finger protein ATL52 [Cucumis melo] >KAA0049120.1 RING-H2 finger protein ATL52 [Cucumis melo var. makuwa] >TYK17444.1 RING-H2 finger protein ATL52 [Cucumis melo var. makuwa])

HSP 1 Score: 690.6 bits (1781), Expect = 7.3e-195
Identity = 354/381 (92.91%), Postives = 359/381 (94.23%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQA-PLPPPGLD 120
           IGILASAFILVSYYTIISKYCRNR STSN AMEMEDEENLSQIRHENQLQA PLPPPGLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENLSQIRHENQLQAPPLPPPGLD 120

Query: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVR 240
           TCPLCRSNISPTNLF   TQEIQ TQH VSSAFQYQHQHRTNDTV+VVVVQDL DLT VR
Sbjct: 181 TCPLCRSNISPTNLFSTATQEIQ-TQHFVSSAFQYQHQHRTNDTVLVVVVQDLDDLTVVR 240

Query: 241 QETADSRLENDDA-YKNQRQCFASESQNSEARDRMNQVRQEYDVEDGVVQPFRRSVSLNS 300
           QET  SRLENDDA  KNQR+ +ASESQNS  R+RMNQVRQEYDV DGVVQPFRRSVSLNS
Sbjct: 241 QETVVSRLENDDASSKNQREGYASESQNSGERERMNQVRQEYDVVDGVVQPFRRSVSLNS 300

Query: 301 LSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRS 360
           LSWQG VSVADILR SQDSEEEVEEDELQQMGIGSSKVFVQE SHSNH+TGVSNLGMNRS
Sbjct: 301 LSWQGPVSVADILRVSQDSEEEVEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMNRS 360

Query: 361 ISTGKLGFTNYGKGKSCIIPS 380
           ISTGKLGFTNYGKGKSCIIPS
Sbjct: 361 ISTGKLGFTNYGKGKSCIIPS 380

[Close]

BLAST of Lsi05G018790 vs. NCBI nr
Match: XP_004134368.1 (RING-H2 finger protein ATL51 [Cucumis sativus] >KGN56695.1 hypothetical protein Csa_010103 [Cucumis sativus])

HSP 1 Score: 689.9 bits (1779), Expect = 1.2e-194
Identity = 352/382 (92.15%), Postives = 360/382 (94.24%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDS TDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSATDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQA-PLPPPGLD 120
           IGILASAFILVSYYTIISKYCRNR STSN AMEMEDEEN+SQIRHENQLQA PLPPPGLD
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRASTSNDAMEMEDEENISQIRHENQLQAPPLPPPGLD 120

Query: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHS 180
           EALIKSITVCKYKRGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHS
Sbjct: 121 EALIKSITVCKYKRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHS 180

Query: 181 TCPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVR 240
           TCPLCRSNISPTNLF  PTQEIQTTQH VSSAFQYQHQHRTNDT+VVVVVQDL DLT VR
Sbjct: 181 TCPLCRSNISPTNLFSTPTQEIQTTQHFVSSAFQYQHQHRTNDTIVVVVVQDLDDLTVVR 240

Query: 241 QETADSRLENDDA-YKNQRQCFASESQNSEARDRMNQVRQEYD-VEDGVVQPFRRSVSLN 300
           QET DSRLENDDA  KNQR+  A+ESQ S AR+RMNQVRQEYD V DGVV+PFRRSVSLN
Sbjct: 241 QETVDSRLENDDASSKNQREGCAAESQISGARERMNQVRQEYDVVVDGVVEPFRRSVSLN 300

Query: 301 SLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNR 360
           SLSWQGQVSVADILR SQDSEEE EEDELQQMGIGSSKVFVQE SHSNH+TGVSNLGMNR
Sbjct: 301 SLSWQGQVSVADILRVSQDSEEEAEEDELQQMGIGSSKVFVQEQSHSNHRTGVSNLGMNR 360

Query: 361 SISTGKLGFTNYGKGKSCIIPS 380
           SISTGKLGFTNYGKGKSCII S
Sbjct: 361 SISTGKLGFTNYGKGKSCIISS 382

[Close]

BLAST of Lsi05G018790 vs. NCBI nr
Match: XP_022147036.1 (RING-H2 finger protein ATL52-like [Momordica charantia])

HSP 1 Score: 623.2 bits (1606), Expect = 1.4e-174
Identity = 325/380 (85.53%), Postives = 346/380 (91.05%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYG+NGDSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGNNGDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLPPPGLDE 120
           IGILASAFILVSYYTIISKYCRNR +T++AAMEM+DEENL+QIRHENQLQA  PP GLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRAATTSAAMEMDDEENLAQIRHENQLQA--PPAGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKY RGDGLVEGTDCSVCLSEF+ENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYIRGDGLVEGTDCSVCLSEFQENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVRQ 240
           CPLCRSNISPTNLFP PTQEIQ T+H+ ++A QY  QHR+NDTVVVVVVQDLQDLT V Q
Sbjct: 181 CPLCRSNISPTNLFPPPTQEIQRTEHINAAALQY--QHRSNDTVVVVVVQDLQDLT-VSQ 240

Query: 241 ETADSRLENDDA-YKNQRQCFASESQNSEARDRMNQVRQEYDVEDGVVQPFRRSVSLNSL 300
           +TA   +END A  KNQRQ FAS SQ+SE RDRM QVR++ DV   VVQPFRRSVSL+S 
Sbjct: 241 QTAVLGIENDGASSKNQRQSFASVSQDSEPRDRMIQVRED-DVVGDVVQPFRRSVSLDSF 300

Query: 301 SWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRSI 360
           SWQGQVSVADILR SQDSEEEVEEDE+ QMGIGSSKVFVQEH  SNHK GVSNLGMNRS+
Sbjct: 301 SWQGQVSVADILRESQDSEEEVEEDEM-QMGIGSSKVFVQEHFQSNHKNGVSNLGMNRSV 360

Query: 361 STGKLGFTNYGKGKSCIIPS 380
           STG+LGFTNY KGKSCIIPS
Sbjct: 361 STGRLGFTNYEKGKSCIIPS 373

[Close]

BLAST of Lsi05G018790 vs. NCBI nr
Match: XP_023540121.1 (RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 602.8 bits (1553), Expect = 2.0e-168
Identity = 319/383 (83.29%), Postives = 338/383 (88.25%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGDSGTDFSPLIIAI 60
           MGSVGNSNQWQPYAY+DCSLEICSIYCPQWCYIIFPPPPPFGYG+N DSGTDFSPLIIAI
Sbjct: 1   MGSVGNSNQWQPYAYRDCSLEICSIYCPQWCYIIFPPPPPFGYGTNSDSGTDFSPLIIAI 60

Query: 61  IGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLPPPGLDE 120
           IGILASAFILVSYYTIISKYCRNR +TSN+ MEM+DEENLSQIRHENQLQAP PP GLDE
Sbjct: 61  IGILASAFILVSYYTIISKYCRNRATTSNSNMEMDDEENLSQIRHENQLQAPPPPAGLDE 120

Query: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180
           ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST
Sbjct: 121 ALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHST 180

Query: 181 CPLCRSNISPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVRQ 240
           CPLCRSNISP NLFP PTQEIQ T+HL  +++ +Q+QHR+NDTVVVVVVQDL DLT   Q
Sbjct: 181 CPLCRSNISPINLFPPPTQEIQRTEHL--NSYNFQYQHRSNDTVVVVVVQDLPDLTVSSQ 240

Query: 241 ETADSRLENDD-AYKNQRQCFASESQNSEARDRM-NQVRQEYDVEDGVVQPFRRSVSLNS 300
           ETA   LEND  + KNQRQ F S++Q+SE RD M +Q+RQ     D  VQPFRRSVSLNS
Sbjct: 241 ETAVLGLENDGVSSKNQRQSFVSDNQDSEPRDIMIHQIRQ-----DDAVQPFRRSVSLNS 300

Query: 301 LSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSHSNHKTGVSNLGMNRS 360
           LSWQGQVSVADILRASQDSEEEVEEDEL QMGIGSSK FVQE  HS     VSNL M+RS
Sbjct: 301 LSWQGQVSVADILRASQDSEEEVEEDEL-QMGIGSSKAFVQEDCHSR----VSNLEMHRS 360

Query: 361 ISTGKLGFTNYG--KGKSCIIPS 380
           ISTGKLGFTNYG  KGKSCIIPS
Sbjct: 361 ISTGKLGFTNYGNWKGKSCIIPS 371

[Close]

BLAST of Lsi05G018790 vs. TAIR 10
Match: AT5G17600.1 (RING/U-box superfamily protein )

HSP 1 Score: 260.4 bits (664), Expect = 2.3e-69
Identity = 166/401 (41.40%), Postives = 227/401 (56.61%), Query Frame = 0


Query: 6   NSNQWQPY-AYKDCSLEICSIYCPQWCYIIFPPPPP--FGYGSNGDSGTDFSPLIIAIIG 65
           N N W PY +Y DCS  IC+IYCPQWCY+IFPPPPP  F    +  S + FSPL+IA+IG
Sbjct: 4   NPNPWSPYDSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIG 63

Query: 66  ILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLPPPGLDEAL 125
           IL SA ILVSYYT+ISKYC   + TS++  E  +  +  +    +  +      GL+E++
Sbjct: 64  ILTSALILVSYYTLISKYCHRHHQTSSS--ETLNLNHNGEGFFSSTQRISTNGDGLNESM 123

Query: 126 IKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCP 185
           IKSITV KYK GDG V+G+DCSVCLSEFEENESLRLLPKC+HAFHLPCIDTWLKSHS CP
Sbjct: 124 IKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCP 183

Query: 186 LCRSNISPTNLFPFPTQEI-QTTQHLVSSAFQYQHQ---------------HRTNDTVVV 245
           LCR+ ++  N    PT  + Q    +V++     HQ                +T D   V
Sbjct: 184 LCRAFVTGVN---NPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSV 243

Query: 246 VVVQDLQDLTEVRQETADSRLENDDAYKNQRQCFASESQNSEARDRMNQVRQEYDVEDGV 305
           VV++DL+                              S+NS+AR  +    +  + +D  
Sbjct: 244 VVIEDLE----------------------------IGSRNSDARSELQLPEERRETKDED 303

Query: 306 VQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEH----- 365
             P RRSVSLNS      VS+AD+LR       E+E++E +  G+G+S+   +       
Sbjct: 304 SLPIRRSVSLNS---GVVVSIADVLR-------EIEDEEGESGGVGTSQRREEGEDGDGK 361

Query: 366 ----SHSNHKTGVSNLGMNRSISTGKLGFTNYGKGKSCIIP 379
               + +N ++G  +    RS+STG+  F+ Y +G++  +P
Sbjct: 364 TIPPTEANQRSGGVSGFFVRSLSTGRFIFSRYDRGRNYRLP 361

[Close]

BLAST of Lsi05G018790 vs. TAIR 10
Match: AT3G03550.1 (RING/U-box superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.1e-68
Identity = 177/407 (43.49%), Postives = 229/407 (56.27%), Query Frame = 0


Query: 1   MGSVGNSNQWQPY--AYKDCSLEICSIYCPQWCYIIFPPPPPFGYGSNGD-SGTDFSPLI 60
           MGS GN N W     +Y+DCS  +CS+YCPQWCY+IFPPPP F      D S +DFSPL+
Sbjct: 1   MGSTGNPNPWGTTYDSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLL 60

Query: 61  IAIIGILASAFILVSYYTIISKYC----RNRNSTSNAAMEMEDEENLSQIRHENQLQAPL 120
           IA+IGILASAFILVSYYT+ISKYC     N +STS AA+     +   Q  + N      
Sbjct: 61  IALIGILASAFILVSYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGAT 120

Query: 121 PP---------PGLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSH 180
            P          GLDE+LIKSITV KY++ DG VE +DCSVCLSEF+ENESLRLLPKC+H
Sbjct: 121 NPNQTIGGGGGDGLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNH 180

Query: 181 AFHLPCIDTWLKSHSTCPLCRSNI---SPTNLFPFPTQEIQTTQHLVSSAFQYQHQHRTN 240
           AFH+PCIDTWLKSHS CPLCR+ I   S   +     Q+I T  + +S          T 
Sbjct: 181 AFHVPCIDTWLKSHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSIS----------TG 240

Query: 241 DTVVVVVVQDLQDLTEVRQETADSRLENDDAYKNQRQCFASESQNSEARDRMNQVRQEYD 300
           D  VVVV  DL+          +SR  N             E+ N  +  +  +++   D
Sbjct: 241 DDSVVVVNLDLE----------NSRSRN-------------ETVNEGSTPKPPEMQDSRD 300

Query: 301 VEDGVVQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQE- 360
            E+      RRS SLN  S  G VS+ADILR       E+E+DE +  G+G+S+ +V+E 
Sbjct: 301 GEE------RRSASLN--SGGGVVSIADILR-------EIEDDE-ESAGVGTSR-WVEEG 355

Query: 361 ---------HSHSNHKTGVSNLGMNRSISTGKLGFTNYGKGKSCIIP 379
                     S +N   G+SN  +  S++  K   + Y + K+  +P
Sbjct: 361 EGEKTPPPSGSAANQTNGISNFLVRSSMAAMKR--SGYDRAKNYRLP 355

[Close]

BLAST of Lsi05G018790 vs. TAIR 10
Match: AT4G17905.1 (RING/U-box superfamily protein )

HSP 1 Score: 171.4 bits (433), Expect = 1.4e-42
Identity = 90/201 (44.78%), Postives = 118/201 (58.71%), Query Frame = 0


Query: 1   MGSVGNSNQWQPYAY-KDCSLEICSIYCPQWCYIIFPPPPPFGY----GSNGDSGTDFSP 60
           M S  N + W  Y   +DC+  +CS +CPQWC  I   PPP  Y         S  + SP
Sbjct: 1   MESDPNPSAWNQYINPRDCTQGLCSTFCPQWCTYINFSPPPISYEQFLNDGVASNPNLSP 60

Query: 61  LIIAIIGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIR------HENQL 120
           L+IAI GI A+AF+L +YYT++SKYC N ++T+ AA E    + +  +        ++  
Sbjct: 61  LVIAIFGIFATAFLLAAYYTLVSKYCAN-DTTNEAASESGRSDIILDVNSPERGDQDDPF 120

Query: 121 QAPLPPPGLDEALIKSITVCKYKRGDG--LVEGTDCSVCLSEFEENESLRLLPKCSHAFH 180
                  GLD+ LIK I   K K+      + GTDCS+CL EF E+ESLRLLPKC+H FH
Sbjct: 121 ALESSTAGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFH 180

Query: 181 LPCIDTWLKSHSTCPLCRSNI 189
           + CID WLKSHS CPLCR+ I
Sbjct: 181 VVCIDRWLKSHSNCPLCRAKI 200

[Close]

BLAST of Lsi05G018790 vs. TAIR 10
Match: AT1G72220.1 (RING/U-box superfamily protein )

HSP 1 Score: 133.3 bits (334), Expect = 4.2e-31
Identity = 116/392 (29.59%), Postives = 183/392 (46.68%), Query Frame = 0


Query: 17  DCSLEICSIYCPQWC------YIIFPPPPPFG----------------YGSNGDSGTDFS 76
           DCS  +C   CP  C      Y I P  PP+                 Y  + DS +   
Sbjct: 22  DCSNGVCDPICPYNCYPEPDYYTISPQLPPWSSSPQPSPCPSPSISAVYLPSQDSSSSLD 81

Query: 77  PLIIAIIGILASAFILVSYYTIISKYCRNRNSTSNAAMEMEDEENLSQIRHENQLQAPLP 136
            + I  I     A +L  ++ +   +  + N  +    + ++E+N + +  E Q +  + 
Sbjct: 82  AISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDREQVD 141

Query: 137 PP-------GLDEALIKSITVCKYKRGDGLVEGTDCSVCLSEFEENESLRLLPKCSHAFH 196
            P       GL +++I SIT+C YKRGDGL+E TDC VCL+EFEE+ESLRLLPKC+HAFH
Sbjct: 142 HPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFH 201

Query: 197 LPCIDTWLKSHSTCPLCRSNISPTNL-FPFPTQEIQTTQHLVSSAFQYQHQHRTNDTVVV 256
           + CIDTWL SH+ CPLCR+ I+  ++  P  +  ++ T     S       H  ND V  
Sbjct: 202 ISCIDTWLSSHTNCPLCRAGIAMISVTTPRYSGPVEVTPGGSGS-------HLENDGV-- 261

Query: 257 VVVQDLQDLTEVRQETADSRLENDDA-YKNQRQCFASESQNS--EARDRMNQVRQEYDVE 316
               D +D  E+         E+DD+  + +   F S+   S  E ++R+  +++  D  
Sbjct: 262 ----DEEDHGEIENRVDSDFKESDDSDIRIEIYRFDSDGDGSETETKERVRVLKECMDPN 321

Query: 317 DGVVQPFRRSVSLNSLSWQGQVSVADILRASQDSEEEVEEDELQQMGIGSSKVFVQEHSH 375
            G         S+NSLS   +  V  +    +  E + EE          ++   ++ + 
Sbjct: 322 GG--------DSVNSLS-HTKTHVESVDFPGKSCENQSEE---------FTRHNGEDEAS 381

[Close]

BLAST of Lsi05G018790 vs. TAIR 10
Match: AT5G43420.1 (RING/U-box superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 6.7e-29
Identity = 94/308 (30.52%), Postives = 145/308 (47.08%), Query Frame = 0


Query: 36  PPPPPFGYGSNGDSGTDFSPLIIAIIGILASAFILVSYYTIISKYCRNRNSTSNAAMEME 95
           PPPPP  +     +GT F  L +A+IGILA+AF+LVSYY  + K C N +      +++ 
Sbjct: 17  PPPPPPIFHRASSTGTSFPILAVAVIGILATAFLLVSYYVFVIKCCLNWH-----RIDIL 76

Query: 96  DEENLSQIRHENQ-----LQAPLPPPGLDEALIKSITVCKYKR----GDGLVEG------ 155
              +LS+ R  +Q         L   GLDE++I++I + K+K+     DG+  G      
Sbjct: 77  GRFSLSRRRRNDQDPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEE 136

Query: 156 ----TDCSVCLSEFEENESLRLLPKCSHAFHLPCIDTWLKSHSTCPLCRSNISPTNLFPF 215
                +CSVCLSEF++ E LR++P CSH FH+ CID WL++++ CPLCR+ +S    FP 
Sbjct: 137 EKRSQECSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPP 196

Query: 216 PTQEIQTT--QHLVSSAFQYQHQHRTNDTVVVVVVQDLQDLTEVRQETADSRLENDDAYK 275
                 +T  ++LV    + ++          VV++    +   R      RL       
Sbjct: 197 DRVSAPSTSPENLVMLRGENEY----------VVIELGSSIGSDRDSPRHGRLLTGQERS 256

Query: 276 NQRQCFASESQNS------------------------EARDRMNQVRQEYDVEDGVVQPF 299
           N        +QNS                           D    +R+  D + G +QP 
Sbjct: 257 NSGYLLNENTQNSISPSPKKLDRGGLPRKFRKLHKMTSMGDECIDIRRGKDEQFGSIQPI 309

The following BLAST results are available for this feature:

BLAST of Lsi05G018790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF64	3.2e-68	41.40	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
Q9SRQ8	1.6e-67	43.49	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]
Q7XLY8	1.1e-57	43.44	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
P0C041	2.0e-41	44.78	Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana OX=3702 GN=ATL53 P...	[more]
Q8LFY8	5.9e-30	29.59	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]

BLAST of Lsi05G018790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D2D1	3.5e-195	92.91	RING-type E3 ubiquitin transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3AW58	3.5e-195	92.91	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103483448 PE=3 ...	[more]
A0A0A0L405	6.0e-195	92.15	RING-type E3 ubiquitin transferase OS=Cucumis sativus OX=3659 GN=Csa_3G129520 PE...	[more]
A0A6J1D151	6.9e-175	85.53	RING-type E3 ubiquitin transferase OS=Momordica charantia OX=3673 GN=LOC11101606...	[more]
A0A6J1IC58	6.3e-168	83.25	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111473464 P...	[more]

BLAST of Lsi05G018790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901021.1	8.6e-196	92.63	RING-H2 finger protein ATL52-like [Benincasa hispida]	[more]
XP_008438300.1	7.3e-195	92.91	PREDICTED: RING-H2 finger protein ATL52 [Cucumis melo] >KAA0049120.1 RING-H2 fin...	[more]
XP_004134368.1	1.2e-194	92.15	RING-H2 finger protein ATL51 [Cucumis sativus] >KGN56695.1 hypothetical protein ...	[more]
XP_022147036.1	1.4e-174	85.53	RING-H2 finger protein ATL52-like [Momordica charantia]	[more]
XP_023540121.1	2.0e-168	83.29	RING-H2 finger protein ATL51-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lsi05G018790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G17600.1	2.3e-69	41.40	RING/U-box superfamily protein	[more]
AT3G03550.1	1.1e-68	43.49	RING/U-box superfamily protein	[more]
AT4G17905.1	1.4e-42	44.78	RING/U-box superfamily protein	[more]
AT1G72220.1	4.2e-31	29.59	RING/U-box superfamily protein	[more]
AT5G43420.1	6.7e-29	30.52	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 143..184 e-value: 2.0E-7 score: 40.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 142..185 e-value: 9.3E-14 score: 51.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 143..185 score: 12.99088
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 118..192 e-value: 6.9E-22 score: 78.5
None	No IPR available	PANTHER	PTHR45676:SF108	E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE	coord: 4..244
None	No IPR available	PANTHER	PTHR45676:SF108	E3 UBIQUITIN-PROTEIN LIGASE OS04G0590900-LIKE	coord: 270..371
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 142..185 e-value: 8.62052E-19 score: 76.9569
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 131..191
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 4..244
IPR044675	E3 ubiquitin-protein ligase RING1-like	PANTHER	PTHR45676	RING-H2 FINGER PROTEIN ATL51-RELATED	coord: 270..371

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G018790.1	Lsi05G018790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane