Lsi05G018570 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G018570
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr05: 25803907 .. 25809882 (-)
RNA-Seq ExpressionLsi05G018570
SyntenyLsi05G018570
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGGTCTGCTTTAAGCATTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCAGTATCTGTAGCGAGCTTCTTTTACTACTTGATGTATGTTTAACTATGACCTTCTTTTACATGGTGAATTTCGATAGAACTGTCTATTTGAACAAGGATTGTTGCCTAAGGAATTGAAGTATGTTGGTATTTCCTCTATTGTTTTTATTTATTTTTTATTTTTTGTTTTTGGGTGCTGGAAGGGTAATCATGGTTGGGACTAAAGAGTTGATCTCATTATGAGTTCCAAGTTTATATTTCTTAGGGTTCCTCCTATACACAATCAAAATACCCCTTGTTTTAGGTTAGAATTTTTAGTGCTCACACTAGAAGTTCTTTTGATGTGGCCGATGCATGGGTTTCATTTTAATATCCATTTGAATGGGCGTTGGACCTGTTCTATCCAATATACATGCAGGTTATTCGGGGTGATTGTCATTTGGAGGTTTGTCGGGGTTGATTTTCTCTTGTTTACATGAAGGTATGCTTTTGCAGTGGGAAGTTATTAACAGCAACCTTCCATTTAAGTCCTGGATCATTTACTCGATGATTAGTATATTTTGGAACATCTTATACATTTTTTTTACGCAGTACAATTTGCTCTGGTGCTGTTGTCTTCTTCCCTCATATCTCTTCTTTCTTCTTTTTTTTCCTTTTTTTTTTCTTCCCCTTTCCTCTTTTCCTCCAATCTCCAAAATTTTATTTCGTTAGGCAAAGCTATCAGTAAAGGTCGGTTGAAACCAGATGTTGCTGAGATAAATTGCATCAAAATTCCCTCCTTCTGGGTATGATCAGAATGGCTGAGACTCACTTGGAAGCATTTCTATTCGCGGTGAATTGGAAAAAAAAATATATGGCAGGTAATGTTGTGCTTGGTTCAAGATATTTATAGGGAAATCTGTAGGTTTGGATTCTCTATTATTTTATTGGATTTGTTCGTAAAAAATAAAATAAAATGAGCAGTACATGATCGAAGTGAACCTTTTACTCACAATTGCGTCTTCTTTGAGGGGCTAGAAAAGTGCATGTTGGACTATGAGTCTATTATGATACTCGATTCATGACTACAGGTTTTCTTTTCTTTTAACTATAAACTTCTTTTTAGCACGTAATGTCTTTGAGTTTAAAAAGATACTACCCTGATTGATGAACTTGAGTGTGAATTGTTTGTGAGAGTATTAACCTAAGCTACACAAATAATGTATCTGATTGCTGGTTGTAGTGTAGTAGCAGTAGATATTGGTTTGGGTAAAAACTTAATGTTTAGTCTTTTTCTCTGGTGTTTGTTCTTTTCTCTCCTCCCACGCCCCTTCTTCTCGTCTTTCCTTTTCAAATAATTTCTTGGTAGGATAACCTGCAAAACGACGGTATGAGAGCTGCAGTCTTTGATTTCAAACTCGGGTTGCGACTTGGATGAGGTGGATGTCAATGTCTTAGTTTGTGCTCGGTATATTGTTTCTGAAGGAACCGAGCACCGACCTATAATGTTGAACCTCACAGCTCGAGTCTTCATCATGTTTATGCTAACCTGGTTAAAATAGGTTAGAACTTTTTGCATCAACTTTGAATAGTTGGGATTGAAGAAGTTCAGATTTTTCCTTGTCCTGGATTACTTAAATTTGAGATTTAAAAACTAGTTTTCATTTTACGTTTAATTTCTCATGCAATGTCTAGCTACAGGATGCTTCTGTTGCCAATATTTGTGTCATTACGACCAAATGAATGTGCTTCTCTTTCATCTCTGTCAAAAATTTCCATAGAACATTCAAAATAACCACTAGATGCTTATTGTTTATGCGTTTTTTTTTTTTTGTATGTTTTTAAATAAGTCTTAACTGAAATAGCCTTTTTCCGTTTTGACATGATCCTTGGTTGAGTTGTCGAGTTATTGCTACGGCTTTTCCTTTATTTTGTCGAGTTGTCGAGTTTGGGCTTTTGCTACATCTGCAGTTTGAGATTTGAATCTCTGTTGAAAGCTTAATGATTTGGATATAGTTGGATGGATTGCTTTATCTCATCTCATTTCTTCCATCCATTTTTGAAATATAAATGATATTTTTCAATATTTTTACTGTTAAATTTCTTATGGAAGACCTTTTCAGCTTCGCTAATAAGTCATCTAAATAATTGATCGATTTGAAATGGCTCCTATCCGAGGAAGATTAAGATCTTTCTTTGAGAGTTTAGTCATAGAGCTGTAAACACGATTGTATTTAAAGGAAAATGCCTTAAGACTTGATCTCTCTTCTTCGTGGTGTATTATGTACGCAACGAGCATCGTGATTTTTGGGGTTTTTTCCTCCTTTTGTGGCTCATTGCCCCTTCGTTGCTATTGGCAAACGATTCTCAGACATTTTTTATCTCGGTTTTCCTTTTTGTGGGTCTACGATTTCATGGCGACGAAAAGTTATTATGGCACCAAACGAGGAAGTTTTTCTGTTAAAAAAAAACTATTTAGAGGTGAAAAGAATGGTTGAATATTTAGTGTCACTTTCTACGTATTTTTATTGTCTTTGGATTTATTCATTTTTTTGCTTTATGTTGGTGTAAATGTAAACACAATTATATCAATCATAGCGTGTCTTTGATCTCAAATTACGGGCCATTCGTGTAATCCACCATAGAGGTTTTCTCCAAATTCCATTCACAATAATATTTGTTTCTCATAAAAAAAAAAATAATAATAACAAGTATGTGCCAAATTGGCAGTTCAATTAAAGCACATCAATATTTAAGTTACAATAATAATTACAAGAATTTAAAAAACAAAAGGGAAAAAATCTAACTGAAATTGGAGTTTAAATATTAATTCCTAATAATTCTCCAACGTCTTACCTTTCTCTCCGTTAGTATTGCTGCTTTAATTGGAATAAACCAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGCTGCTTTAATTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATCTAGTGATGATGGATCGTTGTACAAAGAAAGGTAATCCTCATTGCTAAAAATAAAACTCGAATTATAAATATGAATAGAAGAAACAAGAGGACATGTATAAAAGGGAACAAAAAAATCTTAATTGAGATGATAAAAGTTAATGTTTTTTTTAGAATTCTTGTAGTACTATTACATACATTACTTTTCACACTATACTTTATTAAATGATATTTTAATGCTATCGTTAAATTATATTGGCATGCCTTACAATAGGAAATTTTCGTCTTTAAAGCTCCATTTAACTATTCTTGGACATTATTTCTCGAAAAAAAAAACTGTTCTTGGACATTATTAGGTTACAACATTTTATTTTATTTATTTATTATCAATAAACAATAATAAATGTTCTTTTTAAGAAATAATAAATGTTATTAACACAGGAAAAGAAGTAATTATAGATGTTCTAAAATTAGTTACTTCAAACAATTTTTACCATTTTTAAAAATAAAATTATATTGTTAAAACCTATTTTCAATTCAATTATGGTTTAACTTGTTAAGAAATATGTTTTTTTTACCAAAATACAGAAGATTCAGATGTCTCAATTCACAAAACTTAAAAAAAGAACTACTAATATTTGTTTATATTTACTTTAAAATAAAAAACAGTCATGTTGTGGTGGCTTTAGATTTTTTTTATTGTGAAGTTAAAACCTATATCAAATTCAAGCATAGTTAATTCGTTAAGACATATATCTTTGACTAAAATGTCAAAGATTTAGATGTCTCACCTAGTCGTAGAACTTAAAAGAAGAACTAATATTTGTTTATAAAAGTTAAATTATCTCTTACGTTGTGTTAGTTGATCTAAGTCTGTCTTTGATAGAGACATTAAGAGTTTATTGGACAAGCCTCCATTTCATCGTCATAAGACCAACTTGAACATATCTTAGATTTTAAAATATATACATCAAAGAGTTCGGAGATTCAAACTGCCTCACTCCCACATGTTGTCAAACTCTAAGAAGAAAAATTCTAATGTCGCAAATCAAATACAAAAGACTAAGATTTTTACTTACTATTTAAAACAAAGAAGTTCAAATAGTTAGGTGGATTAACTATGCTTTGAGATGACTCTTTTGAACCTTCATTTGATAAAGAAAAAAAACGACAATCCAATTCCAACTCTTGTATTATCTATGTGTGTGTTTTTACCATTGCATTGTAAACTTTTAAATTTAAACAATGATCTCTCATAAATTATGAAATTGTTGCATTTAAATCCAATACAAAAAATTGAAATGGTTGCCTTCAAAATTGTTTTTAGTTCAACAATTATGGATGTGAATGTTTGAATCATCGATATCTGGAACGGTCTTTATCCTTCAAGTTAAGTTCATATTGATTTCTTTTATATATGTGAGTGTTTGGACTAGCTTACACCCACCTTAATTAATTTCACGAGATATCCACTTGACTCTACAACATTTAAGTATCAAGTAAACTCATAAGATATTAAATTCTGAGCAGTTGGACATCATAGGTTGAACTCATTTCTCATTTTTTTTTTATTAAACTCATGACCTCACTCGACCATTAGGTCAACTTATGATCATTAAGTTCGGGTTAATATTACATTGAAAGTTCAGACATGCAATTTTAATACCAACACGAGCATAACCGACAACTTTTTTTCATCCATGAGAACAAAATTTCAAATATTTACCTTGTGGAGGAAGTTATAATTCCCAAATCCCACCCAAAATACAAAGAGGAAAATTGAAGGGAATGAAAGAACAAGAAACGAAATGAAACGACGTCGTAGAGTTTTTCAGTTTCGTCGTAATAAATAACAAAGAAAGCAAGCAACGGCAAAAGAAACGCGGGATTCGGAGGCGAAAGTTTTAAATTGTGGCCCATATTTTATATTTGTTAATTTGTTTTTAAAAAAATAATAATTAAAAAACAAAAAAACAAAAAACAAAAAGAAACAAATGTAACGGATTCACCGTTTGCCACTTAGCGCCTCCAATTCCCACATTCCCTTTCTTTCTCTCTCTCTCTCTTTCCCTCTTCCTCTCCTTTCCAATTCCATTCACTTTCCGATCCGATTCGTTCCTTCCTCGATCTCCAGCTTCCAAATCCATCAACAATTTGATGCTATGAAGGTCAGATTTCCGCCATTTATCTATCTGCAATTACCTTTTTTCGTTCACAATCAAACGCTATTTCATATGTACTTCTAATAACAATGCATTCGTCGTTTGATTTCTCTCTAATGGAATTTCTTGATGTTCAATCTTCAGGAACTAACCGGATCGTCTATTTCGGCATCGGAAGATTATCTCTGA

mRNA sequence

ATGTTGGTCTGCTTTAAGCATTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCAGTATCTGTAGCGAGCTTCTTTTACTACTTGATGAACCGAGCACCGACCTATAATGTTGAACCTCACAGCTCGAGTCTTCATCATGTTTATGCTAACCTGGAACTAACCGGATCGTCTATTTCGGCATCGGAAGATTATCTCTGA

Coding sequence (CDS)

ATGTTGGTCTGCTTTAAGCATTTGAAGTATTGCTGTCCTTTTGTCTACGAGACAAGACACCCAGTATCTGTAGCGAGCTTCTTTTACTACTTGATGAACCGAGCACCGACCTATAATGTTGAACCTCACAGCTCGAGTCTTCATCATGTTTATGCTAACCTGGAACTAACCGGATCGTCTATTTCGGCATCGGAAGATTATCTCTGA

Protein sequence

MLVCFKHLKYCCPFVYETRHPVSVASFFYYLMNRAPTYNVEPHSSSLHHVYANLELTGSSISASEDYL
Homology
[Close]
BLAST of Lsi05G018570 vs. ExPASy TrEMBL
Match: A0A0A0L9C6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129730 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.6e-08
Identity = 29/32 (90.62%), Postives = 30/32 (93.75%), Query Frame = 0 

Query: 1  MLVCFKHLKYCCPFVYETRHPVSVASFFYYLM 33
          MLVCFK LKYCCPFVYETRHP SV+SFFYYLM
Sbjct: 1  MLVCFKRLKYCCPFVYETRHPESVSSFFYYLM 32

The following BLAST results are available for this feature:
BLAST of Lsi05G018570 vs.
Match NameE-valueIdentityDescription
BLAST of Lsi05G018570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L9C62.6e-0890.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129730 PE=4 SV=1[more]
BLAST of Lsi05G018570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
BLAST of Lsi05G018570 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G018570.1Lsi05G018570.1mRNA