Lsi05G018360 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi05G018360
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description60S ribosomal protein L13a, putative
Locationchr05: 25642181 .. 25644391 (+)
RNA-Seq ExpressionLsi05G018360
SyntenyLsi05G018360
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCGTCTTCTCTCCCAAAACCCTAGCTGCTCGCTGAGACTGAGAGAGTAGCCGCTGAACCAAAAATGGTGTCGGGTTCTGGAATCTGCGCGAAGCGCGTCGTCGTTGACGCAAGGCACCACATGCTCGGGAGGCTTGCTTCGATCGTAGCTAAGGAGCTTCTCAATGGCCAGAAGGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGTATGAATACCAAGCCTTCTCATGGCCCTATTCACTTCCGTGCTCCTGCCAAGATCCTCTGGCGAACAATCCGTGGGTAATGTCTATTGTCGCACTGTTTTTTTAATCCCTGTTTTCATTTAGGTATGGAATCGATCATGAGAGCAGCAACATACATTTATGTATTCCTTGTGGTGTTTTAGTAATCTGTTAAGTTTATACTTGTTTAGGTTAGTAAGAAAATTTGTTTTTCACCGTATTCGTATTCCTTGAAAGGCTATGTTATAATCTTAATGAATTAGAAGTTGAAAGGCTATGTTATAATCTTAATGAATTTGAAGAGTAGCAATACAGGTGTGCAACTTATGTTTTCTTTAATTTGTAAGTAATATGTATGGTCTACACTGTATTGCGCATTTAATGATTGTGGAATCCAATTTCATGGTTTACTATGTTTGGGTTGTAAACTTTTAGGCTTACGAACGTCATATCGAAACTGTGAATTCATTTTCCATAATTTCAGTTCCTCAAGGAAAATTGTGATCTTTCCTTCTATGCTTCCAGATTAGGGGTTTGGGTTCATCCTTTATCTGTTTTGAAATTTAATTCCATAATGTATGGCCTAGATAGGTTGACGGCTTAATTGGTTTCTATTTGTCCGTTCTTAGGATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGAGGATGGTCATCCCCGACGCTCTCAAGTGAGTTGAGGACGTTATCTTCATGTTATATTTAGGGTGCCAATAGGCAATCATGAATTCTGTCTTTATACTTGTAGTATATAATCTTAGCTATGAGTTCAAATTTTTGGATACAAAAGTAAAATGATTTAATGCAAGTGAACCTTCTTGGTCTAATTTTCTTTATTGACACGTTCTCTCTATTGTAATATTAGGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGCAGACTCTCATCAGAAGTGGGATGGAACCACTATGACACTATCAAGGTACGCATTAGGATTGATGAATCTATACTATTCCGCATGGTTTCTGTTCTTAAATTCTCTCTTCCAACGCCATCAAATCAACATTTTGCCGTATTTTGTATGCTCCCAAGCTGCACCGATTTATCTTGGAAAAATTATAGTGTATTGCATTTGAATGGGAATTATCCTTCATTCATTCTTTGCCATTAAAGAAGCAAGCATTTAAGAATGGTGTGGGTCCATTAAATATAATAATCTATTATCTAATAATGTGTCTCATATCGAATGGAAGGAGTCAACTCACAGCACTTGAAGTTTTCCCATTTTCTTCAAGCATCCCCCCATTTCTAGTGGTCATCTTCCATTCGCTTTCATATTGGTGAAGTGAATGGATAATGCTGGCTATATGAATCTATTCTGCGTGTTCGACTCTTTTACACTGATTTCTGATTTATTTGTTTTCATTCTCCCAGGAGCTTGAAAGGAAGAGGAAAGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTGACCAAGTTGAGGGTCAAAGCCGAGAAGGTTGCAGAGGAGAAGCTCGGTCCCCAGTTGCAAGTAATAGCTCCAATTAAATACTAGTTTGTTTGCGAGATTGTGTTGAGTGAGAATGCGTAATGTTATGGGAGAATGGATTTGCAGTTGAATTTGCATTTTTTTTAGTACCATTTTGTTGTCTATTGATGTTGGTCGCCATTTTTCTTATCCTTTTTTCTTCGGATATTGAAATTAGTTAAATTTTGGGGATCGCTTATTATTCCGTATTCTACTCTGCTTCAATAGATATCGTACCCTGAAATTTTGTTATATTTGACATGCATGTGCCTTGAATGGACGACACCCATTCATACTTCCGTTTTCAATTTATGGGGTACCTGAATCTTTTACTGG

mRNA sequence

GCCGTCTTCTCTCCCAAAACCCTAGCTGCTCGCTGAGACTGAGAGAGTAGCCGCTGAACCAAAAATGGTGTCGGGTTCTGGAATCTGCGCGAAGCGCGTCGTCGTTGACGCAAGGCACCACATGCTCGGGAGGCTTGCTTCGATCGTAGCTAAGGAGCTTCTCAATGGCCAGAAGGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGTATGAATACCAAGCCTTCTCATGGCCCTATTCACTTCCGTGCTCCTGCCAAGATCCTCTGGCGAACAATCCGTGGGATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGAGGATGGTCATCCCCGACGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGCAGACTCTCATCAGAAGTGGGATGGAACCACTATGACACTATCAAGGAGCTTGAAAGGAAGAGGAAAGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTGACCAAGTTGAGGGTCAAAGCCGAGAAGGTTGCAGAGGAGAAGCTCGGTCCCCAGTTGCAAGTAATAGCTCCAATTAAATACTAGTTTGTTTGCGAGATTGTGTTGAGTGAGAATGCGTAATGTTATGGGAGAATGGATTTGCAGTTGAATTTGCATTTTTTTTAGTACCATTTTGTTGTCTATTGATGTTGGTCGCCATTTTTCTTATCCTTTTTTCTTCGGATATTGAAATTAGTTAAATTTTGGGGATCGCTTATTATTCCGTATTCTACTCTGCTTCAATAGATATCGTACCCTGAAATTTTGTTATATTTGACATGCATGTGCCTTGAATGGACGACACCCATTCATACTTCCGTTTTCAATTTATGGGGTACCTGAATCTTTTACTGG

Coding sequence (CDS)

ATGGTGTCGGGTTCTGGAATCTGCGCGAAGCGCGTCGTCGTTGACGCAAGGCACCACATGCTCGGGAGGCTTGCTTCGATCGTAGCTAAGGAGCTTCTCAATGGCCAGAAGGTGGTCGTCGTCCGATGTGAAGAAATTTGCATCTCTGGAGGATTGGTTCGCCAGAAGATGAAGTACATGAGGTTCTTGAGGAAGCGTATGAATACCAAGCCTTCTCATGGCCCTATTCACTTCCGTGCTCCTGCCAAGATCCTCTGGCGAACAATCCGTGGGATGATCCCACACAAGACAAAGCGTGGAGCTGCTGCTCTTGCTCGTTTGAAGGCATATGAAGGTGTTCCTCCTCCCTATGATAAGATGAAGAGGATGGTCATCCCCGACGCTCTCAAGGTTTTGAGGCTTCAAGCTGGACACAAATACTGCTTGTTGGGCAGACTCTCATCAGAAGTGGGATGGAACCACTATGACACTATCAAGGAGCTTGAAAGGAAGAGGAAAGAGAGGGCTCAAGCCGCATACGAGAAGAAGAAGCAGTTGACCAAGTTGAGGGTCAAAGCCGAGAAGGTTGCAGAGGAGAAGCTCGGTCCCCAGTTGCAAGTAATAGCTCCAATTAAATACTAG

Protein sequence

MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKMKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLTKLRVKAEKVAEEKLGPQLQVIAPIKY
Homology
[Close]
BLAST of Lsi05G018360 vs. ExPASy Swiss-Prot
Match: Q9FKC0 (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.7e-103
Identity = 185/206 (89.81%), Postives = 195/206 (94.66%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVAEEKLG QL ++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]
BLAST of Lsi05G018360 vs. ExPASy Swiss-Prot
Match: Q9LRX8 (60S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=1)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-102
Identity = 186/206 (90.29%), Postives = 196/206 (95.15%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLR KAEKVAEEKLG QL V+A IKY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]
BLAST of Lsi05G018360 vs. ExPASy Swiss-Prot
Match: Q9SFU1 (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.4e-102
Identity = 183/206 (88.83%), Postives = 196/206 (95.15%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLR KAEKVAEEKLG QL V+AP+KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]
BLAST of Lsi05G018360 vs. ExPASy Swiss-Prot
Match: Q9SVR0 (60S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.7e-101
Identity = 181/206 (87.86%), Postives = 194/206 (94.17%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLR KAEKVAEE+LG QL V+AP+KY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206

[Close]
BLAST of Lsi05G018360 vs. ExPASy Swiss-Prot
Match: O49885 (60S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.2e-95
Identity = 173/206 (83.98%), Postives = 191/206 (92.72%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGI AKRVVVDARHHMLGRLASIVAKELLNGQKVV+VR EEICISGGLVRQKMKY+
Sbjct: 1   MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIH  AP+KI WRT+RGMIPHKTKRG  ALARLK YEG+PPP+DK 
Sbjct: 61  RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGWN+YDTIKELE+KRKER+Q  YE+KKQL 
Sbjct: 121 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRKERSQVVYERKKQLN 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAE+VA+EKLG QL ++AP+KY
Sbjct: 181 KLRVKAEQVAQEKLGSQLDILAPVKY 205

[Close]
BLAST of Lsi05G018360 vs. ExPASy TrEMBL
Match: A0A6J1D0E7 (60S ribosomal protein L13a-4-like OS=Momordica charantia OX=3673 GN=LOC111016129 PE=3 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 8.0e-109
Identity = 203/206 (98.54%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQL+VIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLEVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. ExPASy TrEMBL
Match: A0A6J1EAG0 (60S ribosomal protein L13a-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111432187 PE=3 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108
Identity = 202/206 (98.06%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. ExPASy TrEMBL
Match: A0A5A7U034 (60S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002690 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 202/206 (98.06%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. ExPASy TrEMBL
Match: A0A0A0L439 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131930 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 202/206 (98.06%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. ExPASy TrEMBL
Match: A0A1S3AW63 (60S ribosomal protein L13a-2-like OS=Cucumis melo OX=3656 GN=LOC103483483 PE=3 SV=1)

HSP 1 Score: 401.7 bits (1031), Expect = 1.8e-108
Identity = 202/206 (98.06%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. NCBI nr
Match: XP_022147118.1 (60S ribosomal protein L13a-4-like [Momordica charantia])

HSP 1 Score: 402.9 bits (1034), Expect = 1.7e-108
Identity = 203/206 (98.54%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQL+VIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLEVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. NCBI nr
Match: XP_022924796.1 (60S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata] >XP_023529032.1 60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo] >KAG6582470.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018859.1 60S ribosomal protein L13a-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 402.1 bits (1032), Expect = 2.8e-108
Identity = 202/206 (98.06%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVV+DARHHMLGRLASIVAKELLNGQKVV+VRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVIDARHHMLGRLASIVAKELLNGQKVVLVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKI+WRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKIIWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. NCBI nr
Match: XP_004133995.1 (60S ribosomal protein L13a-2 [Cucumis sativus] >XP_008438365.1 PREDICTED: 60S ribosomal protein L13a-2-like [Cucumis melo] >KAA0049152.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa] >KGN56740.1 hypothetical protein Csa_009815 [Cucumis sativus] >TYK17407.1 60S ribosomal protein L13a-4 [Cucumis melo var. makuwa])

HSP 1 Score: 401.7 bits (1031), Expect = 3.7e-108
Identity = 202/206 (98.06%), Postives = 206/206 (100.00%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKER+QAAYEKKKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERSQAAYEKKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. NCBI nr
Match: XP_023521847.1 (60S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 399.4 bits (1025), Expect = 1.8e-107
Identity = 201/206 (97.57%), Postives = 204/206 (99.03%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQA YEKKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAVYEKKKQLN 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVA+EKLGPQLQVIAPIKY
Sbjct: 181 KLRVKAEKVADEKLGPQLQVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. NCBI nr
Match: XP_022964267.1 (60S ribosomal protein L13a-4 [Cucurbita moschata] >XP_023515318.1 60S ribosomal protein L13a-4 [Cucurbita pepo subsp. pepo] >KAG6593785.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026115.1 60S ribosomal protein L13a-4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 399.1 bits (1024), Expect = 2.4e-107
Identity = 200/206 (97.09%), Postives = 205/206 (99.51%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRL+SI+AKELLNGQKVVVVRCEEICISGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLSSIIAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLN 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLR+KAEKVAEEKLGPQL+VIAPIKY
Sbjct: 181 KLRIKAEKVAEEKLGPQLEVIAPIKY 206

[Close]
BLAST of Lsi05G018360 vs. TAIR 10
Match: AT5G48760.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 375.6 bits (963), Expect = 2.6e-104
Identity = 185/206 (89.81%), Postives = 195/206 (94.66%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVAEEKLG QL ++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]
BLAST of Lsi05G018360 vs. TAIR 10
Match: AT5G48760.2 (Ribosomal protein L13 family protein )

HSP 1 Score: 375.6 bits (963), Expect = 2.6e-104
Identity = 185/206 (89.81%), Postives = 195/206 (94.66%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHMLGRLASI AKELLNGQKVV+VRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK YEGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERA   YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRKERAHVVYERKKQLN 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLRVKAEKVAEEKLG QL ++AP+KY
Sbjct: 181 KLRVKAEKVAEEKLGAQLDILAPVKY 206

[Close]
BLAST of Lsi05G018360 vs. TAIR 10
Match: AT3G24830.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 374.0 bits (959), Expect = 7.7e-104
Identity = 186/206 (90.29%), Postives = 196/206 (95.15%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGIC+KRVVVDARHHM GRLASI+AKELLNGQ VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EGVPPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKER+QA YE+KKQLT
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRKERSQALYERKKQLT 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLR KAEKVAEEKLG QL V+A IKY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLASIKY 206

[Close]
BLAST of Lsi05G018360 vs. TAIR 10
Match: AT3G07110.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 373.6 bits (958), Expect = 1.0e-103
Identity = 183/206 (88.83%), Postives = 196/206 (95.15%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVDARHHMLGRLAS+VAK+LLNGQ +VVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGA ALARLK +EGVP PYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELE KRKERAQA YE+KKQL+
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRKERAQAVYERKKQLS 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLR KAEKVAEEKLG QL V+AP+KY
Sbjct: 181 KLRAKAEKVAEEKLGSQLDVLAPVKY 206

[Close]
BLAST of Lsi05G018360 vs. TAIR 10
Match: AT4G13170.1 (Ribosomal protein L13 family protein )

HSP 1 Score: 369.4 bits (947), Expect = 1.9e-102
Identity = 181/206 (87.86%), Postives = 194/206 (94.17%), Query Frame = 0 

Query: 1   MVSGSGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVVVRCEEICISGGLVRQKMKYM 60
           MVSGSGICAKRVVVD RHHMLGRLAS  AKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYM
Sbjct: 1   MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60

Query: 61  RFLRKRMNTKPSHGPIHFRAPAKILWRTIRGMIPHKTKRGAAALARLKAYEGVPPPYDKM 120
           RFLRKRMNTKPSHGPIHFRAP+KI WRT+RGMIPHKTKRGAAALARLK +EG+PPPYDK+
Sbjct: 61  RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120

Query: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELERKRKERAQAAYEKKKQLT 180
           KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIKELE KRKER+Q  YE+KKQL 
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRKERSQVMYERKKQLN 180

Query: 181 KLRVKAEKVAEEKLGPQLQVIAPIKY 207
           KLR KAEKVAEE+LG QL V+AP+KY
Sbjct: 181 KLRTKAEKVAEERLGSQLDVLAPVKY 206

The following BLAST results are available for this feature:
BLAST of Lsi05G018360 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FKC03.7e-10389.8160S ribosomal protein L13a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL13AD PE=2 SV=... [more]
Q9LRX81.1e-10290.2960S ribosomal protein L13a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL13AB PE=2 SV=... [more]
Q9SFU11.4e-10288.8360S ribosomal protein L13a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL13AA PE=2 SV=... [more]
Q9SVR02.7e-10187.8660S ribosomal protein L13a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL13AC PE=2 SV=... [more]
O498852.2e-9583.9860S ribosomal protein L13a OS=Lupinus luteus OX=3873 GN=RPL13A PE=2 SV=1[more]
BLAST of Lsi05G018360 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1D0E78.0e-10998.5460S ribosomal protein L13a-4-like OS=Momordica charantia OX=3673 GN=LOC111016129... [more]
A0A6J1EAG01.4e-10898.0660S ribosomal protein L13a-4-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO... [more]
A0A5A7U0341.8e-10898.0660S ribosomal protein L13a-4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A0A0L4391.8e-10898.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131930 PE=3 SV=1[more]
A0A1S3AW631.8e-10898.0660S ribosomal protein L13a-2-like OS=Cucumis melo OX=3656 GN=LOC103483483 PE=3 S... [more]
BLAST of Lsi05G018360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147118.11.7e-10898.5460S ribosomal protein L13a-4-like [Momordica charantia][more]
XP_022924796.12.8e-10898.0660S ribosomal protein L13a-4-like isoform X1 [Cucurbita moschata] >XP_023529032.... [more]
XP_004133995.13.7e-10898.0660S ribosomal protein L13a-2 [Cucumis sativus] >XP_008438365.1 PREDICTED: 60S ri... [more]
XP_023521847.11.8e-10797.5760S ribosomal protein L13a-4-like [Cucurbita pepo subsp. pepo][more]
XP_022964267.12.4e-10797.0960S ribosomal protein L13a-4 [Cucurbita moschata] >XP_023515318.1 60S ribosomal ... [more]
BLAST of Lsi05G018360 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G48760.12.6e-10489.81Ribosomal protein L13 family protein [more]
AT5G48760.22.6e-10489.81Ribosomal protein L13 family protein [more]
AT3G24830.17.7e-10490.29Ribosomal protein L13 family protein [more]
AT3G07110.11.0e-10388.83Ribosomal protein L13 family protein [more]
AT4G13170.11.9e-10287.86Ribosomal protein L13 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..179
NoneNo IPR availableGENE3D6.10.250.3250coord: 156..206
e-value: 2.9E-14
score: 54.8
NoneNo IPR availablePANTHERPTHR11545:SF2060S RIBOSOMAL PROTEIN L13A-1-RELATEDcoord: 1..206
IPR005822Ribosomal protein L13PFAMPF00572Ribosomal_L13coord: 10..115
e-value: 3.9E-27
score: 94.7
IPR005822Ribosomal protein L13PANTHERPTHR11545RIBOSOMAL PROTEIN L13coord: 1..206
IPR005822Ribosomal protein L13HAMAPMF_01366Ribosomal_L13coord: 11..135
score: 19.430883
IPR005822Ribosomal protein L13CDDcd00392Ribosomal_L13coord: 12..113
e-value: 1.82643E-40
score: 131.858
IPR005755Ribosomal protein L13, eukaryotic/archaealTIGRFAMTIGR01077TIGR01077coord: 12..153
e-value: 1.6E-53
score: 178.8
IPR036899Ribosomal protein L13 superfamilyGENE3D3.90.1180.10Ribosomal protein L13coord: 8..154
e-value: 1.2E-61
score: 208.9
IPR036899Ribosomal protein L13 superfamilySUPERFAMILY52161Ribosomal protein L13coord: 12..154
IPR023563Ribosomal protein L13, conserved sitePROSITEPS00783RIBOSOMAL_L13coord: 89..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G018360.1Lsi05G018360.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0017148 negative regulation of translation
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003729 mRNA binding
molecular_function GO:0003735 structural constituent of ribosome