Lsi05G018050 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G018050
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	S-protein homolog
Location	chr05: 25325143 .. 25327011 (-)
RNA-Seq Expression	Lsi05G018050
Synteny	Lsi05G018050

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCATGAAGATTCTCATTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTTGTGTCATTGTTACCTGCAGAGCAACTGTATGGCATAGAATACGAAGTGCGTGTGATCAATGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCCAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCATGATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGACGAAGTAAACTGGAAGAAGGATTTCTCGTGGTAAAGCACCAGATCAGCTAAGTTCTTTCTACACTGTTCTACTTCTGCTTCTCTACTAGTTTTGCTTTTACTGTCTCGATCTTGGCCTTTCCAAATCTAGATTCTATAGTGTAGTTCAGGAAAGGAAGGCTATTTTGCATCATAAATATGAGTTTAGCGAAGGAATTTGAATTCCCCGGTTATCTACCTAGTAAAAGTCGCCTTTTTTTTTCCTTTTTTGTACCGTGTACCTTTTGAATTTATTAATAATAAATCTATTTTCTTTTTAGGCGAATAATAAATTTATGTTTGTTCAGTAATCCTGTGGCATATAATGGTCGGTAATAATTGCTTTTTGTGGTATTTGGTACGTAAAATCAGGCGTTCACTAGAGACGAGTTCTCTGCTTTTTGGATGCTCTATATCCTTGCTGTCTCGATTTTCCTATTTCCTTTATTTTTCTCTGTAGACGTGAGGGTTGAATCTTGAAAGGGCTGTGTTTAGGTAGTTTATTAAGGATTGATTTCTTCTTTCAAATCGCCCTTCCACAAAAGGAATGTAAGGTGAGAATGTATAATGAGAAGATTTTAAAAAAGACCAGTTCGAGAGAGCCGAAACAGAAGTTGAGACAGAGGAAACAGAGGGAGAATCAAGAATGTTTAATGAGAAGAAACTAATTAAGTTTCAGAATCAGCAAGCTTCTTAGATGGTCAACGATCTGTACTTACATCAAGCTACTTGTTTTTAATTCACTCCTAAATCTATCACCTTCCAATTTTCAATACTTGCGGAATAAAGTAGTAGGTATTAGACAAGCCCCATAGTCCTGATACACTCAATCTTAGACCCAGCTAAAACTGGTGGAGCACCGTTTGAGGACAAAAGGATTGCCAGGGTGGAAGAAGTAGGTAAAAAAGGAGAAGAGATAGGCCATAAATTAAGCTTGAAGAAGAAGAAAGAAAAAACATAGCTGATATGCACTCCACTCCTTCCTTTAAGTTGAAAGTTCAAATTTTCACTCTTTTTTGTTGTACTAAAAAAATCTTGAAGACAAACTTTAGGAGTGGTAAGTCCATGACATACCTATGTTTATGGTGCAATCAATCTGTTGGAAAATGGTAATAATTAAGATGGTGACTAAAAATGTTAGTTGAAAGCTTAAAGTAGATATAATAGTATAGAAATATGGTGTATATTTTTTAGTGTCTGTGTAATGAAAAGCTTGTAGCCTAAATTGAAACATCCACAATAGTGGATTGTTTTGAAAATTCTGTCCGTCGGCCCCGCCCATGGGTTTTATTAATGTGGTTTTTGTAGATTTGTTTTTAGGCGGGGATTGTAAAAATATATATATATCTTTTACTTGAAAAGACCAAACATATATAGCGAAATGGGAAATTGAATTTGATGCAGGGCAGGGCAGGGCCCCGAGTCTACGCTAAAGATTTGCCTGACATGA

mRNA sequence

ATGATCATGAAGATTCTCATTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTTGTGTCATTGTTACCTGCAGAGCAACTGTATGGCATAGAATACGAAGTGCGTGTGATCAATGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCCAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCATGATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGACGAAGTAAACTGGAAGAAGGATTTCTCGTGGGCAGGGCAGGGCCCCGAGTCTACGCTAAAGATTTGCCTGACATGA

Coding sequence (CDS)

ATGATCATGAAGATTCTCATTAGCATTCTGATGCTCATTTTCTTCCCATTCTTCACTGTTTTTGTGTCATTGTTACCTGCAGAGCAACTGTATGGCATAGAATACGAAGTGCGTGTGATCAATGGCTTCACAAATAACTCCTCACTGCCTCTGGTGATATGGTGCGCTTCCAAAGACAGTGATATTGGCGGGCGTGCGCTGCAGGAGCATGATGATTTCAGTTGGCCCGTCAAGACCAACTTCTGGATTACTACAACCTCTCAATTCTCATGCACTGTCAAATTGGACCGTACAAGGAAGAGTTTTGATGCATTCAAGGTACCAAGAGATATCTATCGCTGTAGTGCTCTCAGGAAATGCTCTTGGTTGGTTATGGAAGATGGGTTTTATTTCAGTGATGACGAAGTAAACTGGAAGAAGGATTTCTCGTGGGCAGGGCAGGGCCCCGAGTCTACGCTAAAGATTTGCCTGACATGA

Protein sequence

MIMKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSWAGQGPESTLKICLT

Homology

[Close]

BLAST of Lsi05G018050 vs. ExPASy TrEMBL
Match: A0A5D3D3G0 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002390 PE=3 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.4e-76
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MIMKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDS 60
           MIMKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD 
Sbjct: 1   MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDG 60

Query: 61  DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC 120
           DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC
Sbjct: 61  DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC 120

Query: 121 SWLVMEDGFYFSDDEVNWKKDFSW 145
           SWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 121 SWLVMEDGFYFSDDEVNWKKDFSW 144

[Close]

BLAST of Lsi05G018050 vs. ExPASy TrEMBL
Match: A0A5A7U6C9 (S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004160 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MIMKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDS 60
           MIMKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD 
Sbjct: 1   MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDG 60

Query: 61  DIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK 120
           DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK
Sbjct: 61  DIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK 120

Query: 121 CSWLVMEDGFYFSDDEVNWKKDFSW 145
           CSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 121 CSWLVMEDGFYFSDDEVNWKKDFSW 145

[Close]

BLAST of Lsi05G018050 vs. ExPASy TrEMBL
Match: A0A1S4DSD2 (S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103483510 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 5.8e-75
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MIMKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDS 60
           MIMKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD 
Sbjct: 1   MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDG 60

Query: 61  DIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK 120
           DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK
Sbjct: 61  DIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK 120

Query: 121 CSWLVMEDGFYFSDDEVNWKKDFSW 145
           CSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 121 CSWLVMEDGFYFSDDEVNWKKDFSW 145

[Close]

BLAST of Lsi05G018050 vs. ExPASy TrEMBL
Match: A0A6J1GCS3 (S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452986 PE=3 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.1e-72
Identity = 134/142 (94.37%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 3   MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDI 62
           MKILISILMLIFFPFFTVF+SLLP + LYGIEYEVRVINGFTNNSSLPLVIWCASKDSDI
Sbjct: 1   MKILISILMLIFFPFFTVFMSLLPPDPLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDI 60

Query: 63  GGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSW 122
           GGRALQEHDDFSW VKTNFWITTTSQFSCTVKLDRTR+SFDAFKVPRDIYRCSA RKCSW
Sbjct: 61  GGRALQEHDDFSWLVKTNFWITTTSQFSCTVKLDRTRRSFDAFKVPRDIYRCSAFRKCSW 120

Query: 123 LVMEDGFYFSDDEVNWKKDFSW 145
           LVMEDGFYFSDDEVNWKK+FSW
Sbjct: 121 LVMEDGFYFSDDEVNWKKEFSW 142

[Close]

BLAST of Lsi05G018050 vs. ExPASy TrEMBL
Match: A0A0A0L6V3 (S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G133250 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 8.7e-63
Identity = 115/118 (97.46%), Postives = 116/118 (98.31%), Query Frame = 0


Query: 28  EQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWI-TTT 87
           EQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DIGGRALQEHDDFSWPVKTNFWI TTT
Sbjct: 82  EQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDIGGRALQEHDDFSWPVKTNFWITTTT 141

Query: 88  SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 145
           SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 142 SQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWLVMEDGFYFSDDEVNWKKDFSW 199

[Close]

BLAST of Lsi05G018050 vs. NCBI nr
Match: TYK17379.1 (self-incompatibility family protein [Cucumis melo var. makuwa])

HSP 1 Score: 294.7 bits (753), Expect = 4.9e-76
Identity = 141/144 (97.92%), Postives = 143/144 (99.31%), Query Frame = 0


Query: 1   MIMKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDS 60
           MIMKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD 
Sbjct: 1   MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDG 60

Query: 61  DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC 120
           DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC
Sbjct: 61  DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC 120

Query: 121 SWLVMEDGFYFSDDEVNWKKDFSW 145
           SWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 121 SWLVMEDGFYFSDDEVNWKKDFSW 144

[Close]

BLAST of Lsi05G018050 vs. NCBI nr
Match: XP_038876719.1 (S-protein homolog 6-like [Benincasa hispida])

HSP 1 Score: 293.1 bits (749), Expect = 1.4e-75
Identity = 140/142 (98.59%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 3   MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDI 62
           MKILISILMLIFFPFF+VFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKDSDI
Sbjct: 1   MKILISILMLIFFPFFSVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDSDI 60

Query: 63  GGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSW 122
           GGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSW
Sbjct: 61  GGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSW 120

Query: 123 LVMEDGFYFSDDEVNWKKDFSW 145
           LVMEDGFYFSDDEVNWKKDFSW
Sbjct: 121 LVMEDGFYFSDDEVNWKKDFSW 142

[Close]

BLAST of Lsi05G018050 vs. NCBI nr
Match: XP_016898907.1 (PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo] >KAA0049181.1 self-incompatibility family protein [Cucumis melo var. makuwa])

HSP 1 Score: 290.0 bits (741), Expect = 1.2e-74
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MIMKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDS 60
           MIMKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD 
Sbjct: 1   MIMKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDG 60

Query: 61  DIGGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK 120
           DIGGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK
Sbjct: 61  DIGGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRK 120

Query: 121 CSWLVMEDGFYFSDDEVNWKKDFSW 145
           CSWLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 121 CSWLVMEDGFYFSDDEVNWKKDFSW 145

[Close]

BLAST of Lsi05G018050 vs. NCBI nr
Match: XP_004134017.2 (S-protein homolog 6 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 4.6e-74
Identity = 139/143 (97.20%), Postives = 141/143 (98.60%), Query Frame = 0


Query: 3   MKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDI 62
           MKIL+SILMLIFFPFFTVFVSLLPAEQL+GIEYEVRVINGFTNNSSLPLVIWCASKD DI
Sbjct: 1   MKILVSILMLIFFPFFTVFVSLLPAEQLFGIEYEVRVINGFTNNSSLPLVIWCASKDGDI 60

Query: 63  GGRALQEHDDFSWPVKTNFWI-TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCS 122
           GGRALQEHDDFSWPVKTNFWI TTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCS
Sbjct: 61  GGRALQEHDDFSWPVKTNFWITTTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCS 120

Query: 123 WLVMEDGFYFSDDEVNWKKDFSW 145
           WLVMEDGFYFSDDEVNWKKDFSW
Sbjct: 121 WLVMEDGFYFSDDEVNWKKDFSW 143

[Close]

BLAST of Lsi05G018050 vs. NCBI nr
Match: KAG7018836.1 (Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 287.0 bits (733), Expect = 1.0e-73
Identity = 136/144 (94.44%), Postives = 141/144 (97.92%), Query Frame = 0


Query: 1   MIMKILISILMLIFFPFFTVFVSLLPAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDS 60
           MIMKIL+SILMLI FPFFTVF+SLLP EQLYGIEYEVRVINGFTNNSSLPLVIWCASKD 
Sbjct: 1   MIMKILVSILMLILFPFFTVFMSLLPPEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDC 60

Query: 61  DIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC 120
           DIGGRALQEHDDFSWPV+TNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC
Sbjct: 61  DIGGRALQEHDDFSWPVRTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKC 120

Query: 121 SWLVMEDGFYFSDDEVNWKKDFSW 145
           +WLV+EDGFYFSDDEVNWKKDFSW
Sbjct: 121 TWLVLEDGFYFSDDEVNWKKDFSW 144

[Close]

BLAST of Lsi05G018050 vs. TAIR 10
Match: AT3G24060.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 156.8 bits (395), Expect = 1.5e-38
Identity = 76/141 (53.90%), Postives = 95/141 (67.38%), Query Frame = 0


Query: 5   ILISILMLIFFPFFTVFVSLL-PAEQLYGIEYEVRVINGFTNNSSLPLVIWCASKDSDIG 64
           I++ + MLI      +F  +L P     G E++VRVIN F +NSSLPLVIWC S   D+G
Sbjct: 7   IILLLFMLIAISLTIIFTLMLQPQTMFLGEEFDVRVINSFRDNSSLPLVIWCTSPQGDLG 66

Query: 65  GRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFKVPRDIYRCSALRKCSWL 124
           GRALQE DDF W  K + W +  ++++CT+K D  RK F+AFKV RD  RC + +KCSW 
Sbjct: 67  GRALQEGDDFEWTAKIDLW-SWMAEYTCTMKWDSKRKQFEAFKVSRDSNRCGSTKKCSWS 126

Query: 125 VMEDGFYFSDDEVNWKKDFSW 145
           V EDGFYFS DEV W KDFSW
Sbjct: 127 VREDGFYFSSDEVYWTKDFSW 146

[Close]

BLAST of Lsi05G018050 vs. TAIR 10
Match: AT1G26798.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07
Identity = 32/95 (33.68%), Postives = 46/95 (48.42%), Query Frame = 0


Query: 37  VRVINGFTNNSSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLD 96
           V +IN  T N    LV+ C +K  D+G  AL+  +   +  + N   TTT  ++CT    
Sbjct: 43  VIIIN--TLNPHERLVVHCRNKGKDLGVHALEPQEQIDFRFRVNLRRTTT--YTCTFSWP 102

Query: 97  RTRKSFDAFKVPRD---IYRCSALRKCSWLVMEDG 129
              K+FD F+V RD      C   R+C W + E G
Sbjct: 103 GNAKTFDIFRVDRDDNSKSTCGICRECIWYICETG 133

[Close]

BLAST of Lsi05G018050 vs. TAIR 10
Match: AT4G16195.1 (Plant self-incompatibility protein S1 family )

HSP 1 Score: 43.9 bits (102), Expect = 1.4e-04
Identity = 29/102 (28.43%), Postives = 47/102 (46.08%), Query Frame = 0


Query: 47  SSLPLVIWCASKDSDIGGRALQEHDDFSWPVKTNFWITTTSQFSCTVKLDRTRKSFDAFK 106
           + L L+  C SKD D+G R LQ  + +S+     F+  T   + C+        SFD +K
Sbjct: 58  NQLTLLYHCKSKDDDLGNRTLQPGESWSFSFGRQFFGRTL--YFCSFSWPNESHSFDIYK 117

Query: 107 VPRDI---YRCSALRKCSWLVMEDG-FYFSDDEVNWKKDFSW 145
             RD     +C + R C W +  +G   F+D+   +   + W
Sbjct: 118 DHRDSGGDNKCESDR-CVWKIRRNGPCRFNDETKQFDLCYPW 156

The following BLAST results are available for this feature:

BLAST of Lsi05G018050 vs.


Match Name	E-value	Identity	Description

BLAST of Lsi05G018050 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D3G0	2.4e-76	97.92	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00...	[more]
A0A5A7U6C9	5.8e-75	97.24	S-protein homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G00...	[more]
A0A1S4DSD2	5.8e-75	97.24	S-protein homolog OS=Cucumis melo OX=3656 GN=LOC103483510 PE=3 SV=1	[more]
A0A6J1GCS3	2.1e-72	94.37	S-protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111452986 PE=3 SV=1	[more]
A0A0A0L6V3	8.7e-63	97.46	S-protein homolog OS=Cucumis sativus OX=3659 GN=Csa_3G133250 PE=3 SV=1	[more]

BLAST of Lsi05G018050 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK17379.1	4.9e-76	97.92	self-incompatibility family protein [Cucumis melo var. makuwa]	[more]
XP_038876719.1	1.4e-75	98.59	S-protein homolog 6-like [Benincasa hispida]	[more]
XP_016898907.1	1.2e-74	97.24	PREDICTED: uncharacterized protein LOC103483510 [Cucumis melo] >KAA0049181.1 sel...	[more]
XP_004134017.2	4.6e-74	97.20	S-protein homolog 6 [Cucumis sativus]	[more]
KAG7018836.1	1.0e-73	94.44	Self-incompatibility protein S1, partial [Cucurbita argyrosperma subsp. argyrosp...	[more]

BLAST of Lsi05G018050 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G24060.1	1.5e-38	53.90	Plant self-incompatibility protein S1 family	[more]
AT1G26798.1	1.3e-07	33.68	Plant self-incompatibility protein S1 family	[more]
AT4G16195.1	1.4e-04	28.43	Plant self-incompatibility protein S1 family	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010264	Plant self-incompatibility S1	PFAM	PF05938	Self-incomp_S1	coord: 37..144 e-value: 1.1E-20 score: 74.1
IPR010264	Plant self-incompatibility S1	PANTHER	PTHR31232	FAMILY NOT NAMED	coord: 10..144
None	No IPR available	PANTHER	PTHR31232:SF8	BNAA01G23250D PROTEIN	coord: 10..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G018050.1	Lsi05G018050.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0060320	rejection of self pollen
cellular_component	GO:0005576	extracellular region