Lsi05G017660 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G017660
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Pre-mRNA-processing factor 19
Location	chr05: 25020334 .. 25027959 (+)
RNA-Seq Expression	Lsi05G017660
Synteny	Lsi05G017660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTAATGGGCTGGGCCGAATTCTAAGATTATACAAGAAATCGGGCCCATCTAAACCAAGCTTTTGAAAATCCCTAGTATCAGCTTACGGATTCCCTTTCTTTCCCGATCTCTCCGTCTCCTCTTCGTCTCGCGCTGCCGGTTGCTGACTGCTCCAGTGTTGCCGTCCGCTGTCTGGGAAAATCGTGCTCTGCCGCTACTTCACTCATAAACCGTACCTCTCCGCTAAAATGAACTGCTCCAGTAAGTCTCCTGTATCTCATTACTGGTAATTCCCCCTGTTGTTCCCCTCATTTTGTGTTGATCTCTGTTATTCATATATCGTGTTGTTCTGCAGTCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAGGAATTCTGGACTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGTATGCTTTTCTTTCCCCTCCCACTTGATTATTTTCTCCATGTTTTTTAGGGTTTTTTCCCCCGTGTTTCTGTTTCGCTCTGCGTAATGTAAATCTGTTTTCTGTTCGGTTCTGTATGCGTGCATTTCTCGTCTTCCTTTGGCTCGTGGAATTATATTCCCTGGAACTATGGGGTCCAAGAGCTTCTTTATCCGTTTTTTCCTTTACTTTGGAAAATTTACGATATTTTATTCGAGGTGATTTCCCGCAGCTGCGGATTCTGAAACTTAGAGCCATTTCAGTTTGTTCTTTCATAGTCGGAATATGTTGAAAATTAATTAATACGCACCTCCATTTTTTTTCCTTTAATTTTTAAATCTTATCATGTCAAAGGACCAATTTTTAAGCGTGCTTTCATACTTTCTTGTAGTACGTCTTTGGCGTTCTTTTCCAACTTTTTCAGGAAGGGAGTCAAGCAGGACTATGTTTTTGTTGCATGGATTTGCAACTTATTGGTTGAGCCTCGTTTCAATGGTTTTATACGTTTCCCTTTCCTGCCGTTTTGACAAAAACATATTTTTACTAGAATGATAATTCTATAATCAAATAAGTTTTCTGATAATCTCGTGGATATCTATACTTTGAATTTTGTCGTCTGGTTCCAATTTCGGAATGGTAGCATAGAGGCATCAAGAGAGAATTTAGAGATTCCATATTTATTCTTATTGAGAGAAAAAAAAAACTTAAATCTCATTTGATAACTATTTGGTTTTTGAAAATTGAACTTAATATACACTATTTATTCCTATTGGTCTCTTATTTTGTTATCTACTTTTTGGGTATGATTTCAAAATCCAAGCTAATTTTTGAAAACTAAAAAATGTAGTCTGTAAAGACTTGTTATTGTTTTTGAATTTTGGTTAAGAATTCAAATCTTTACTTAGAAAAGATGAAAATCATGGTAGAAATTGTTAGAAAATAAGCATAATTTAAAAAATCAGGAGCCAAATGGCTATCCAATTGGACCTTAGTTTTTGCATTTTGGTTATTACTTATTGTAAACACTTATATTTTAGTCTTATTAGTAAATACTTATTGGTAAATGGTTATTACTTAGTTTTTGCATGTTGGTTATTACTTATTAGTAGAGACTTATATTTTACTCTTAGTAGAATTAGATAACTCTGATATGGGGAAGATGCAAATAGTGGAAAAAGGAAGGGTAGTGATTTTACATGTATTATTCTAACTTCTAGACGTGTAAAATGGATACACATGGATCCTTCTCTGTCTGATATCATTTTATGATTTGGTCAAATAATTTTATTTCATACAGTATAAATTGTTTACTGAATTATTTTTAGTGCTTTTATTTGCTCCAATCTAATACAACCTTGAGTTTCGAGGGATTTACTTGAAGGGATTTTAATTTGGTAATCTGCAACTTTTTCTTGCTTTTGTTGGGATATGTTTAAAATTATTTTTCAACAAAATAAATATTGCGTTTGATTAGTGTAAATTGTTTTTTCTGCAACTCCAGGACTATGGGAAATGCCCTGTTACGGGTGAACCGCTTTCCATCGATGACATTGTTCCAATTAAAACTGGAAAGGTATGCAAATATATCTAATTCTAATTAGTTCAGTTATAAATATTTTGGGCCTTTTTGATTTCTCTGTAAAACATGCACGTATATTGTTATTGTTAGTGTAGATTTGGAGAAACAGTGTCTGAATTGGAATGTCAAGTGGTCTGTAATCTACCTAGCTCTATTTGATGAAGTTGAAAACTGTAGGGGGTTTAAATGCTAGAGACATCAGATAGCCTAATAAACATTTTCCTTCTGAATGTCTTTTTTTTTTCCTTTCCAATTCTCCTTCTTTAACTTCGCTTTTGTTCATTAATTTTTCTGCAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAATGTATGAAATTATGATCTATAATCTATTTTATCTCTGTAGTTTTCCTTTTGATCCATTGCTTTGATGCTCTTGTTCTCCTGGAAAGTTCAATATTCTTTGTTTTTGTGTTTCATTGGCTTTATCGTTTAGCTTACATTGTATTATCATGTGTGTAGCTGTACATTATTTCGTGTTTAACTCTTTAGTAAGATATGCGTTAAACCCCAATATAATGAGAAGTATATGAACCATGAATGTTTGTAATGTTTATTTTCTAGTAATTTGTCTCTATCAGATTACCATCTTATATCCTTAGTTATTGTGTACCTTCTTTTTGGATAAGAAACAATTTCATTGATGGTATGAAATTGGAAAAAAGAAAAAGAAAAGGGAGTTATTGAGTACTAAACAATCACCATCCTTCAAGCTTAAGTGTCACATCATCTTTGGGAGTTCATGTTGACATTTCGGTTGTTAAACTATTTACATATATTTTATAGAGCGTTTAATTTGTAACCTTCTATAGAAACTTTGTTGAAATTTAAGCTATCTTATGTTTTAAGTTCTAGAATGTATTTCAATTTCATCATTGTTGTTCCTATTAGATACGTGGGCTTAACACAAAATGGTATTCTACTTATTTCTTTTTTAATCATGCTATTTGCATGTACTGTTTTCTTTCATCGAAGTGAAAAAATTATGTTCTCTCTCTAATGATAGGAATGGGATGTTTTGGTGCTGTCCAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGGTATATTATTTTATAAAATTTTTGTTAATTCCAAATTTCCAAGGGTGTAAAGAACAGTGTATCTGTTTTTCATCTTCGTTCCATAGTCCATCCATAATTATATTATATATTTTTGCCACATGATTTTGCCAATTCATTTCAGCTTTTTCAGATTAGAATTTCTTGGAGCTGTTTTATATCTTTATACTTGTGGTTTACTTCTGTTATGCAGCAATGTTTTACAAGCCATATATTAAGCATATTTATGTTTTTCTATGTGGTGAAGTCATGATGAGATGACTAGAGTTTCGAAAGCTTAACTATTGGTTTAATATATTTTTTTTTTCCTTCTAGCATGATGCTGCATGTCGTGTGATTGCAAGACTTAAAAAAGAACGGGATGAAGCCAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCATCAACTTCATTTGCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGGTTTGTCCTCTCAATCATCCATCAGCATGGATTTTCATGAATTCCCTCGTTCTAATTTGAGTTGATTTTTCATTTTGCCAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGGTATTTTGATGAAAATAAAAGTCAATTAAATATTATTATTTCCTATTAAATAAAAGGATAATTGTTGAATGGATGATGTGAATGTTTAAGATGTCAGGGACAGGCATTCCTGATGAACTTGTATTAATTTGTTGATTGATAATATGATCTCAGATACCTCCTACGTTGGTGCCTGTTGAAGCTCTAGAAACTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGTATGATTCTAAAGTGCATTAACCTATATTCAAATAATTTTTCTTAAATAAGTAGTACGTGGTCTTCATTAAAACAATTTTTTGAAGTCATACTTGCAAGTGCAATTGACCATTTTATTCAATCTGGCCAACGGGCTTTTTTGGGTGAAGAATGAGGCGTGCATGTAATACTAGGAAGCTGTTTTAGAGTTCTACATAATACTTAGCCTTTTCTTAAAAATCTTGTATAATGCATTGTTTATCTTGGTGTGACATAGACTATTTGTCGACATGATGGTGAGTTGACGGTTGATTTTCCTTCTAGATAAATAAGCCGTTGCTAATAATAGTTGCACAAATTTACTTCTCAGACAAGGAAGTTTCTTTTTCCTGGTTTTAGGATGTCATTGCGACTGGAGGGCTGGACACAAATGCTGTTCTTTTTAGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTTTGTTTGCTGGATAGTCGCATTCAAGTGCCGGAGACATTTATTATTAATATTTTTTGCTAACTGGAATATTGAAAATTGTTTGTTTAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGGTTAGTTTTTTTTTTTTCTAAAATTTTATAATTTTCGAATGTATGTTTCAAACTTCGTGTTTGTAACTTTTGAGGTTTCCAAGTAACTTCTAGATCATGTTATGAACTGCTCGTCCTTAAAAGTCCTCTTAGAAACTAACTAGTAAGAGCTAAGTTTAATAATATAAACATATAAATGAACTGCATCTTCTTTTGTCCATAAATTGTTGGTTGAGTTTAGGCTTTAGGTTTCATAACTTGGCTTCATGAACGTGTATTTTTTTTTTAAAAACCTCATGAACGCATAGTTACTTCAACTTAACCAAGAAATGATCATATTGTAGAATTGTTTTTTTATATTTTTCCAATCTAAACTGTAGCTATTTTTCTGAACTGCATCTGAGAGTAGTAATTACTCCTTGTCCTAATTGTGCAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTAAGTTGTTTTTGTTTTTTATTCAACGGCCGTCGTTGATTGTCAATGCTGGTTATAGATGAAACAAGGTTCAAACACTCAGCCAAGTTGTATTGTCTCAATTGCTAAGAGTCTTATAACAGTCTATAACACTAAAGAATTATAAAATAGGAGCAAATCAGTTCTGATTTTGTACGACTCAATTTCATGCCTTAACATAGTGTAAATGAATGTCAATTTTCAAACTCTTACAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCCCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCAGGATTATGCCTGACCCAGGTTAGTAAGTTGCTTAATTTTTCATAAGTGTATATTTGTTTGCTCTGAGATAGACTGTCTTGAATGCGTTGTGCTAGGTCTTTTTGTTTTGTTTTTCAAAGATGGATGACTGAGTGTTGATATATTTCCAAATATTGATACATCTCTGTCAGTCGGTTATGATAGTTTGAGGTTTTGGGATTTGATATCACATGGAAAATTCCTTCAATAGTGAAAAGTGGTATGTTGGTCATAGAGTATACTTATAAATATAGATATTTCTGATTGTCTTGTATTGTCTGGGGTTCACCCCTGATTTTTTTTATATCAATGAATGTTTCTTTTACCAAAAAGAACAAAAATACATGAAATGAAACTTCCCATGTTAAGCACACAAGTGACTCTTAGGATAATCACAAGGTTCTTTTCTGAGATACAGTTTTATTTTGCAGTCACACGTGATGATAGAAAATCATCGTGTAGTTTTTAAAAAAGGTCACCCTTTTAGATTTGTATGACCTAGTTGGTTGGTCAGCTGGAATTGGGTATGTTGTCTCATAGAAAATTTATTTATCCTATCCTCTGCAGGTTGCAGAGGATTCAGAAACGGAGGGCTACACATCTGCTGCCTTCCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGGTGTGAGATTCTCTAACTTAGCAAGATATATCCTCGTATCTCTAACTTTGTGCACTCATTTCTTCTTTATTGCTTTTGCCTGCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGTGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGGTATGTGTTAAATTGGTTGCAGCTAAAGGTACACCAATCTAACTTAGACATGATTGCTACTAATAAAAATCTAAATTGCACAGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCTGGTACTTTTCTTTCTGTAGATGCTGAATGATATAACATAACTAGGAAGATAATGTCTGACGTTTAGTCATGTCTTGTTTGTGGGAGTAACTGAACATCTGTTTCTGGTTCTGTAGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGTAAGCGTTTGGCCCTTGAAATTATTTTTATCCTTCCCTCAAATGGAAATCGGTATTAAATTTATTTATCACCTTATTTTTCGTTCTTAGTAGTTTCTACGAAGTCTAACGACGAGGCTTGCTTGAACTCGCAGGGTTTACCAAGTTGCTAGTGTGAAATCTGAATGGAATTGCATCAAAACTATTCCAGATTTGTCCGGCACAGGTAACGTATCCCTCTCACACGTGCACACGCTCGCGCGCGTGTGTGTAACATTAATAAATGGGAGTAGATCCTAAACCAACGACGTGGAGTAGGCATTTATGATTCATGTGGATTATTGTGACTGTATAATCTAATATTGCTGTTGATTAAAAATTCCGGTTCTACTTTATTATTTCAGGGAAAGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATTTTTGGTGTGCCTGGGGAAGATGGTGCCATGGAGGCATGAGTTTGCATCCAGAATTGAAAATTCCAGAAAAAGATCGACATGATTTATGGTATTTAGAAACCAGATTCTGAAGCAGAGGCATGGAAAATTCTCCAGCAAAGTTGAGAGTAGTTCTTTACACCCAGATCAACAAGTTGAGCAAAATATTTTCACCATTTTTTTTCTTCTGTTGTAGTTTGGACTAATCAGGTTTGATTCTCATTTGTATGAATACATGATTTTGCAGAGGTGTCTGCTGTGTCAACTTCTTGTAGCCATAGAACTTGTTAATATACGCAGACATTTTTCATTGACCGTGTTGTTGCATTTTAATAGTGGATATTAAGACGGCTCTCTATTTATTATTATTTATGATCATTATTAAGTAA

mRNA sequence

GGTTAATGGGCTGGGCCGAATTCTAAGATTATACAAGAAATCGGGCCCATCTAAACCAAGCTTTTGAAAATCCCTAGTATCAGCTTACGGATTCCCTTTCTTTCCCGATCTCTCCGTCTCCTCTTCGTCTCGCGCTGCCGGTTGCTGACTGCTCCAGTGTTGCCGTCCGCTGTCTGGGAAAATCGTGCTCTGCCGCTACTTCACTCATAAACCGTACCTCTCCGCTAAAATGAACTGCTCCATCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAGGAATTCTGGACTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGACTATGGGAAATGCCCTGTTACGGGTGAACCGCTTTCCATCGATGACATTGTTCCAATTAAAACTGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAATGAATGGGATGTTTTGGTGCTGTCCAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGCATGATGCTGCATGTCGTGTGATTGCAAGACTTAAAAAAGAACGGGATGAAGCCAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCATCAACTTCATTTGCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGATACCTCCTACGTTGGTGCCTGTTGAAGCTCTAGAAACTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGATGTCATTGCGACTGGAGGGCTGGACACAAATGCTGTTCTTTTTAGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCCCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCAGGATTATGCCTGACCCAGGTTGCAGAGGATTCAGAAACGGAGGGCTACACATCTGCTGCCTTCCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGTGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCTGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGGTTTACCAAGTTGCTAGTGTGAAATCTGAATGGAATTGCATCAAAACTATTCCAGATTTGTCCGGCACAGGGAAAGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATTTTTGGTGTGCCTGGGGAAGATGGTGCCATGGAGGCATGAGTTTGCATCCAGAATTGAAAATTCCAGAAAAAGATCGACATGATTTATGGTATTTAGAAACCAGATTCTGAAGCAGAGGCATGGAAAATTCTCCAGCAAAGTTGAGAGTAGTTCTTTACACCCAGATCAACAAGTTGAGCAAAATATTTTCACCATTTTTTTTCTTCTGTTGTAGTTTGGACTAATCAGGTTTGATTCTCATTTGTATGAATACATGATTTTGCAGAGGTGTCTGCTGTGTCAACTTCTTGTAGCCATAGAACTTGTTAATATACGCAGACATTTTTCATTGACCGTGTTGTTGCATTTTAATAGTGGATATTAAGACGGCTCTCTATTTATTATTATTTATGATCATTATTAAGTAA

Coding sequence (CDS)

ATGAACTGCTCCATCTCCGGTGAGATTCCGGAAGAGCCAGTTGTCTCCAGGAATTCTGGACTACTCTTCGAGAAGCGCTTAATCGAGAGGCACATTTTGGACTATGGGAAATGCCCTGTTACGGGTGAACCGCTTTCCATCGATGACATTGTTCCAATTAAAACTGGAAAGATAGTCAAGCCCAGGCAAGCTGCTAGCATCCCTGGAATGCTTGGAATGTTCCAGAATGAATGGGATGTTTTGGTGCTGTCCAATTTTGCATTAGAACAACAGCTGCATACAGCTAGACAGGAGCTTAGTCATGCCTTGTATCAGCATGATGCTGCATGTCGTGTGATTGCAAGACTTAAAAAAGAACGGGATGAAGCCAGGTCCTTACTTGCTCAGGCAGAGAGGCAGATGCCTTTGTCATCAACTTCATTTGCATCCAATGCTGCTGCTGTCAATGTTAATGGGAAAAGAGTTAATGAGGATGAGGAATTGGGTCCTGATGGGAAGAAAATACGTCCAGGAATATCAGCCACTGTTATCTCTGAGCTCACAGATTGTAATGCTGCTCTATCACAACAAAGGAAGAGGCGGCAGATACCTCCTACGTTGGTGCCTGTTGAAGCTCTAGAAACTTACACCCAGATTTCTAGTCATCCACTTCATAAAACAAGCAAACCAGGCATTATATCTCTTGACATCCATCATGAGAAGGATGTCATTGCGACTGGAGGGCTGGACACAAATGCTGTTCTTTTTAGTCGATCATCTGGGGAGATTTTATCTACACTAAGTGGCCATTCAAAGAAGGTAACAAGTGTCAAATTTGTGGGCCGAGATGATTTATTCTTGACTGGTTCAGCTGACAAGACTGTCCGTGTTTGGCAACAATCTGATGATGGGAACTACAATTGTAGGCACATTTTAAAGGATCATACAGCTGAGGTCCAAGCTGTTACCGTCCATGCTACCAATAACTTCTTTGTCACTGCCTCCCTTGATAACACATGGTGTTTTTATGAGCTTGCTTCAGGATTATGCCTGACCCAGGTTGCAGAGGATTCAGAAACGGAGGGCTACACATCTGCTGCCTTCCATCCTGATGGTCTCATCCTTGGAACAGGCACGTCAGAGGCTCTTGTTAAAATTTGGGATGTAAAAAGTCAGAAAAATGTGGCCAAATTTGATGGACACGTTGGTGCAGTAACTGCAATATCTTTTTCTGAAAATGGTTATTTCCTTGCGACTGCAGCTCATGATGGAGTAAAGCTGTGGGACCTTCGAAAATTGAAGAACTTCCGTACATTTGCACCTTATGATTCAGAAACTCCAACAAACTCTGTGGACTTTGATCATAGTGGATCTTACCTTGCGATTGCTGGCTCAGACATAAGGGTTTACCAAGTTGCTAGTGTGAAATCTGAATGGAATTGCATCAAAACTATTCCAGATTTGTCCGGCACAGGGAAAGCAACTTGTCTAAAATTTGGACCGGATGCAAAATACTTGGCAGTCGGGTCAATGGATCGAAATCTTCGAATTTTTGGTGTGCCTGGGGAAGATGGTGCCATGGAGGCATGA

Protein sequence

MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMEA

Homology

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BLAST of Lsi05G017660 vs. ExPASy Swiss-Prot
Match: Q9AV81 (Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=PRP19 PE=2 SV=1)

HSP 1 Score: 810.8 bits (2093), Expect = 8.8e-234
Identity = 393/523 (75.14%), Postives = 456/523 (87.19%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           M C+ISGE+P+EPVVS+ SGLLFE+RL+ER+I D+GKCPVT E L++DDIV +KT K+VK
Sbjct: 1   MICAISGEVPDEPVVSKKSGLLFERRLVERYIEDHGKCPVTKEELTMDDIVAVKTNKVVK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           PR  QAASIPG+LGMFQNEWD ++LS+FALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61  PRQLQAASIPGLLGMFQNEWDAIMLSSFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVIS 180
           ERDEAR+LLAQAERQ+P S    A    AV  NGKR  ED E+GPDGKKIRPGI+  +I 
Sbjct: 121 ERDEARALLAQAERQIPASMAGAA--PTAVVSNGKRAFED-EVGPDGKKIRPGINPVMID 180

Query: 181 ELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIA 240
           ELT+CN  LS  RK+RQ+PPTL  ++A+E YTQISSHPLHKT+KPGI+S+DIH  KD+IA
Sbjct: 181 ELTECNTMLSAHRKKRQVPPTLASIDAIERYTQISSHPLHKTNKPGILSMDIHPSKDIIA 240

Query: 241 TGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 300
           TGG+DTNAVLF R SG+IL TL+GHSKK+TS+KFV RD+LF+TGSADKTV++WQ S++GN
Sbjct: 241 TGGIDTNAVLFDRPSGQILCTLTGHSKKITSLKFVPRDELFVTGSADKTVKIWQGSEEGN 300

Query: 301 YNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTS 360
           YNC H LKDHTAEV+AVTVHAT  +FVTAS DNTWCFY++ SG CLTQV E S  EGYTS
Sbjct: 301 YNCIHTLKDHTAEVEAVTVHATQKYFVTASKDNTWCFYDIPSGSCLTQVGESSGQEGYTS 360

Query: 361 AAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGV 420
           A+FHPDGLILGTGT+EA+VKIWDVK+Q NVAKF+GHVG VTA+SFSENGYFLATAA DGV
Sbjct: 361 ASFHPDGLILGTGTTEAVVKIWDVKTQSNVAKFEGHVGPVTAMSFSENGYFLATAALDGV 420

Query: 421 KLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTI 480
           KLWDLRKL+NFRT +PYDS+TPTNSV+FD SGSYLA+ GSD RVYQVA+VK EWN +KT+
Sbjct: 421 KLWDLRKLRNFRTISPYDSDTPTNSVEFDFSGSYLAVGGSDTRVYQVANVKLEWNLVKTL 480

Query: 481 PDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 522
           PDLSGTGK T +KFG DAKY+AVGSMDRNLRIFG PGED  M+
Sbjct: 481 PDLSGTGKVTNVKFGTDAKYIAVGSMDRNLRIFGHPGEDDQMD 520

[Close]

BLAST of Lsi05G017660 vs. ExPASy Swiss-Prot
Match: O22785 (Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=PRP19B PE=1 SV=3)

HSP 1 Score: 782.3 bits (2019), Expect = 3.3e-225
Identity = 384/521 (73.70%), Postives = 444/521 (85.22%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+K
Sbjct: 1   MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61  PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVIS 180
           ERDEAR LLA+ ER +P +  +  +NAA    NGKR   DEELGPD KK+ PGISA +I+
Sbjct: 121 ERDEARQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIIT 180

Query: 181 ELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIA 240
           ELTDCNAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIA
Sbjct: 181 ELTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIA 240

Query: 241 TGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 300
           TGG+D  AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGN
Sbjct: 241 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 300

Query: 301 YNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTS 360
           Y C + L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+
Sbjct: 301 YACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTA 360

Query: 361 AAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGV 420
           AAFHPDGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV
Sbjct: 361 AAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV 420

Query: 421 KLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTI 480
           +LWDLRKL+NF++F   D+    NSV+FD SGSYL IA SDI+VYQ ASVK+EWN IKT+
Sbjct: 421 RLWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTL 480

Query: 481 PDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGA 520
           PDLSGTGKATC+KFG DA+Y+AVGSMDRNLRIFG+PG++ A
Sbjct: 481 PDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKA 515

[Close]

BLAST of Lsi05G017660 vs. ExPASy Swiss-Prot
Match: Q94BR4 (Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PRP19A PE=1 SV=1)

HSP 1 Score: 775.8 bits (2002), Expect = 3.1e-223
Identity = 388/525 (73.90%), Postives = 448/525 (85.33%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+PEEPVVS+ SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVK
Sbjct: 1   MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61  PKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVIS 180
           ERDE+R LLA+AERQ+P +     SNAA    NGKR  +D E GP+ KK+R GISA VI+
Sbjct: 121 ERDESRQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVIT 180

Query: 181 ELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIA 240
           ELTDCNAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIA
Sbjct: 181 ELTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIA 240

Query: 241 TGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 300
           TGG+DT AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGN
Sbjct: 241 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 300

Query: 301 YNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETE-GYT 360
           Y  RH LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + SE +  YT
Sbjct: 301 YTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYT 360

Query: 361 SAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDG 420
           +AAFHPDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DG
Sbjct: 361 AAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG 420

Query: 421 VKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT 480
           V+LWDLRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIRV+Q ASVK+EWN IKT
Sbjct: 421 VRLWDLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKT 480

Query: 481 IPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMEA 523
           +PDLSGTGKAT +KFG D+KY+AVGSMDRNLRIFG+P +D   ++
Sbjct: 481 LPDLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGLPDDDNTEDS 519

[Close]

BLAST of Lsi05G017660 vs. ExPASy Swiss-Prot
Match: Q9UMS4 (Pre-mRNA-processing factor 19 OS=Homo sapiens OX=9606 GN=PRPF19 PE=1 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 2.6e-108
Identity = 224/518 (43.24%), Postives = 320/518 (61.78%), Query Frame = 0


Query: 3   CSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR 62
           CSIS E+PE P VS  S  ++E+RLIE++I + G  P+  +PLS + ++ IK    ++P+
Sbjct: 5   CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64

Query: 63  --QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
              A SIP +L   Q+EWD ++L +F L QQL T RQELSHALYQHDAACRVIARL KE 
Sbjct: 65  PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124

Query: 123 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 182
             AR  LA  + Q  L     A  ++  +V G    E  +LG        G++  +I +L
Sbjct: 125 TAAREALATLKPQAGLIVPQ-AVPSSQPSVVG--AGEPMDLGE-----LVGMTPEIIQKL 184

Query: 183 TDCNAALSQQRKRR--QIPPTLVPVEALETYTQISSH-PLHKTSKPGIISLDI-HHEKDV 242
            D    L+ +RK+R   +P  LV  E L  Y Q++SH  LH  S PGI++LD+   + + 
Sbjct: 185 QDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNK 244

Query: 243 IATGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDD 302
           I TGG D N V+F +SS +IL+TL GH+KKVTSV F    DL  + S D T+R+W     
Sbjct: 245 ILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVP-- 304

Query: 303 GNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGY 362
            N +C  +++ H + V  +++HAT ++ +++S D  W F ++ +G  LT+V +++     
Sbjct: 305 -NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSL 364

Query: 363 TSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHD 422
           T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGY+LATAA D
Sbjct: 365 TCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADD 424

Query: 423 -GVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCI 482
             VKLWDLRKLKNF+T    D+     S+ FD SG+YLA+ G+D+++Y    +  +W  I
Sbjct: 425 SSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEI 484

Query: 483 KTIPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGV 514
               + SG    T + FG  AK++A   MDR+L+ + +
Sbjct: 485 LHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504

[Close]

BLAST of Lsi05G017660 vs. ExPASy Swiss-Prot
Match: Q08E38 (Pre-mRNA-processing factor 19 OS=Bos taurus OX=9913 GN=PRPF19 PE=2 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 7.4e-108
Identity = 223/518 (43.05%), Postives = 320/518 (61.78%), Query Frame = 0


Query: 3   CSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVKPR 62
           CSIS E+PE P VS  S  ++E+RLIE++I + G  P+  +PLS + ++ IK    ++P+
Sbjct: 5   CSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPINNQPLSEEQLIDIKVAHPIRPK 64

Query: 63  --QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 122
              A SIP +L   Q+EWD ++L +F L QQL T RQELSHALYQHDAACRVIARL KE 
Sbjct: 65  PPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLTKEV 124

Query: 123 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 182
             AR  LA  + Q  L     A  ++  +V G    E  +LG        G++  +I +L
Sbjct: 125 TAAREALATLKPQAGLIVPQ-AVPSSQPSVVG--AGEPMDLGE-----LVGMTPEIIQKL 184

Query: 183 TDCNAALSQQRKRR--QIPPTLVPVEALETYTQISSH-PLHKTSKPGIISLDI-HHEKDV 242
            D    L+ +RK+R   +P  LV  E L  Y Q++SH  LH  S PGI++LD+   + + 
Sbjct: 185 QDKATVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNK 244

Query: 243 IATGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDD 302
           I TGG D N V+F +SS +IL+TL GH+KKVTSV F    +L  + S D T+R+W     
Sbjct: 245 ILTGGADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVP-- 304

Query: 303 GNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGY 362
            N +C  +++ H + V  +++HAT ++ +++S D  W F ++ +G  LT+V +++     
Sbjct: 305 -NASCVQVVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGCSL 364

Query: 363 TSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHD 422
           T A FHPDGLI GTGT ++ +KIWD+K + NVA F GH G +T+I+FSENGY+LATAA D
Sbjct: 365 TCAQFHPDGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADD 424

Query: 423 -GVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCI 482
             VKLWDLRKLKNF+T    D+     S+ FD SG+YLA+ G+D+++Y    +  +W  I
Sbjct: 425 SSVKLWDLRKLKNFKTL-QLDNNFEVKSLIFDQSGTYLALGGTDVQIY----ICKQWTEI 484

Query: 483 KTIPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGV 514
               + SG    T + FG  AK++A   MDR+L+ + +
Sbjct: 485 LHFTEHSGL--TTGVAFGHHAKFIASTGMDRSLKFYSL 504

[Close]

BLAST of Lsi05G017660 vs. ExPASy TrEMBL
Match: A0A5D3D0U3 (Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G002000 PE=3 SV=1)

HSP 1 Score: 1028.1 bits (2657), Expect = 1.3e-296
Identity = 510/521 (97.89%), Postives = 516/521 (99.04%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 66  MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 125

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 126 PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 185

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLAQAERQMPLSSTSF+SNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISEL
Sbjct: 186 DEARSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISEL 245

Query: 181 TDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATG 240
           T+CNAALSQQRKRRQIP TLVPVEALE YTQISSHPLHKTSKPGI+SLDIHHEKDVIATG
Sbjct: 246 TECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATG 305

Query: 241 GLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300
           GLDTNAVLF RSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN
Sbjct: 306 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 365

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360
           CRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA
Sbjct: 366 CRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 425

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 426 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 485

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT+PD
Sbjct: 486 WDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTLPD 545

Query: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 522
           LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME
Sbjct: 546 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 586

[Close]

BLAST of Lsi05G017660 vs. ExPASy TrEMBL
Match: A0A1S3AWF5 (Pre-mRNA-processing factor 19 OS=Cucumis melo OX=3656 GN=LOC103483553 PE=3 SV=1)

HSP 1 Score: 1028.1 bits (2657), Expect = 1.3e-296
Identity = 510/521 (97.89%), Postives = 516/521 (99.04%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLAQAERQMPLSSTSF+SNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISEL
Sbjct: 121 DEARSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISEL 180

Query: 181 TDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATG 240
           T+CNAALSQQRKRRQIP TLVPVEALE YTQISSHPLHKTSKPGI+SLDIHHEKDVIATG
Sbjct: 181 TECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATG 240

Query: 241 GLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300
           GLDTNAVLF RSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN
Sbjct: 241 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360
           CRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA
Sbjct: 301 CRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT+PD
Sbjct: 421 WDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTLPD 480

Query: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 522
           LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME
Sbjct: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 521

[Close]

BLAST of Lsi05G017660 vs. ExPASy TrEMBL
Match: A0A0A0L6Z6 (Pre-mRNA-processing factor 19 OS=Cucumis sativus OX=3659 GN=Csa_3G134680 PE=3 SV=1)

HSP 1 Score: 1024.6 bits (2648), Expect = 1.4e-295
Identity = 509/521 (97.70%), Postives = 515/521 (98.85%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLA AERQMPLSSTSF+SNAAAVNVNGKRVNEDEELGPDGKKIRPGIS  VISEL
Sbjct: 121 DEARSLLALAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISDAVISEL 180

Query: 181 TDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATG 240
           T+CNAALSQQRKRRQIP TLVPVEALE YTQISSHPLHKTSKPGI+SLDIHHEKDVIATG
Sbjct: 181 TECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIATG 240

Query: 241 GLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300
           GLDTNAVLF RSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN
Sbjct: 241 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360
           CRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA
Sbjct: 301 CRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT+PD
Sbjct: 421 WDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTLPD 480

Query: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 522
           LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME
Sbjct: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 521

[Close]

BLAST of Lsi05G017660 vs. ExPASy TrEMBL
Match: A0A5A7U025 (Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold171G004530 PE=3 SV=1)

HSP 1 Score: 1013.4 bits (2619), Expect = 3.3e-292
Identity = 510/548 (93.07%), Postives = 516/548 (94.16%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 66  MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 125

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 126 PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 185

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKR-------------------------- 180
           DEARSLLAQAERQMPLSSTSF+SNA AVNVNGKR                          
Sbjct: 186 DEARSLLAQAERQMPLSSTSFSSNAGAVNVNGKRGLASESSISMDFHEFLCSNLSRFFIL 245

Query: 181 -VNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLVPVEALETYTQIS 240
            VNEDEELGPDGKKIRPGIS TVISELT+CNAALSQQRKRRQIP TLVPVEALE YTQIS
Sbjct: 246 SVNEDEELGPDGKKIRPGISDTVISELTECNAALSQQRKRRQIPATLVPVEALENYTQIS 305

Query: 241 SHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFV 300
           SHPLHKTSKPGI+SLDIHHEKDVIATGGLDTNAVLF RSSGEILSTLSGHSKKVTSVKFV
Sbjct: 306 SHPLHKTSKPGILSLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFV 365

Query: 301 GRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTW 360
           GRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN+FFVTASLDNTW
Sbjct: 366 GRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTW 425

Query: 361 CFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDG 420
           CFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDG
Sbjct: 426 CFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDG 485

Query: 421 HVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYL 480
           HVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYL
Sbjct: 486 HVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYL 545

Query: 481 AIAGSDIRVYQVASVKSEWNCIKTIPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGV 522
           AIAGSDIRVYQVASVKSEWNCIKT+PDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGV
Sbjct: 546 AIAGSDIRVYQVASVKSEWNCIKTLPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGV 605

[Close]

BLAST of Lsi05G017660 vs. ExPASy TrEMBL
Match: A0A6J1FIG8 (Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111445620 PE=3 SV=1)

HSP 1 Score: 1008.8 bits (2607), Expect = 8.1e-291
Identity = 503/521 (96.55%), Postives = 513/521 (98.46%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLAQAERQMPLSSTS +SN AAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL
Sbjct: 121 DEARSLLAQAERQMPLSSTSISSN-AAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180

Query: 181 TDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATG 240
           TDCNA+LSQQRK+RQIPPTLVPVEALE+YTQISSHPLHKT+KPGIISLDI+HEKDVIATG
Sbjct: 181 TDCNASLSQQRKKRQIPPTLVPVEALESYTQISSHPLHKTNKPGIISLDINHEKDVIATG 240

Query: 241 GLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300
           GLDTNAVLF RSSGEILSTLSGHSKKVTSVKFV RDDLFLTGSADKTVRVWQ SDDGNYN
Sbjct: 241 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVTRDDLFLTGSADKTVRVWQPSDDGNYN 300

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360
           CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFY+LASGLCLTQVAEDS TEGYTSAA
Sbjct: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYDLASGLCLTQVAEDSGTEGYTSAA 360

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVA+FDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVARFDGHVGAVTAISFSENGYFLATAAHDGVKL 420

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDSETPTNSV+FDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD
Sbjct: 421 WDLRKLKNFRTFAPYDSETPTNSVEFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480

Query: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 522
           LSGTGKATCLKFG DAKYLAVGSMDRNLRIFGVPGEDG ME
Sbjct: 481 LSGTGKATCLKFGTDAKYLAVGSMDRNLRIFGVPGEDGPME 520

[Close]

BLAST of Lsi05G017660 vs. NCBI nr
Match: XP_038891633.1 (pre-mRNA-processing factor 19 [Benincasa hispida])

HSP 1 Score: 1033.9 bits (2672), Expect = 4.9e-298
Identity = 514/522 (98.47%), Postives = 519/522 (99.43%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVS+NSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSKNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLAQAERQMPLSSTSF+SNA AVNVNGKRVNEDEELGPDGKKIRPGISATVISEL
Sbjct: 121 DEARSLLAQAERQMPLSSTSFSSNATAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180

Query: 181 TDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATG 240
           TDCNAALSQQRKRRQIPPTLVPVEALE+Y QISSHPLHKTSKPGIISLDI+HEKDVIATG
Sbjct: 181 TDCNAALSQQRKRRQIPPTLVPVEALESYNQISSHPLHKTSKPGIISLDINHEKDVIATG 240

Query: 241 GLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300
           GLDTNAVLF RSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNY+
Sbjct: 241 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYD 300

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360
           CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA
Sbjct: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD
Sbjct: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480

Query: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMEA 523
           LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMEA
Sbjct: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMEA 522

[Close]

BLAST of Lsi05G017660 vs. NCBI nr
Match: XP_008438467.1 (PREDICTED: pre-mRNA-processing factor 19 [Cucumis melo])

HSP 1 Score: 1028.1 bits (2657), Expect = 2.7e-296
Identity = 510/521 (97.89%), Postives = 516/521 (99.04%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLAQAERQMPLSSTSF+SNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISEL
Sbjct: 121 DEARSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISEL 180

Query: 181 TDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATG 240
           T+CNAALSQQRKRRQIP TLVPVEALE YTQISSHPLHKTSKPGI+SLDIHHEKDVIATG
Sbjct: 181 TECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATG 240

Query: 241 GLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300
           GLDTNAVLF RSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN
Sbjct: 241 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360
           CRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA
Sbjct: 301 CRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT+PD
Sbjct: 421 WDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTLPD 480

Query: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 522
           LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME
Sbjct: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 521

[Close]

BLAST of Lsi05G017660 vs. NCBI nr
Match: TYK17345.1 (pre-mRNA-processing factor 19 [Cucumis melo var. makuwa])

HSP 1 Score: 1028.1 bits (2657), Expect = 2.7e-296
Identity = 510/521 (97.89%), Postives = 516/521 (99.04%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 66  MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 125

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 126 PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 185

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLAQAERQMPLSSTSF+SNA AVNVNGKRVNEDEELGPDGKKIRPGIS TVISEL
Sbjct: 186 DEARSLLAQAERQMPLSSTSFSSNAGAVNVNGKRVNEDEELGPDGKKIRPGISDTVISEL 245

Query: 181 TDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATG 240
           T+CNAALSQQRKRRQIP TLVPVEALE YTQISSHPLHKTSKPGI+SLDIHHEKDVIATG
Sbjct: 246 TECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGILSLDIHHEKDVIATG 305

Query: 241 GLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300
           GLDTNAVLF RSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN
Sbjct: 306 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 365

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360
           CRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA
Sbjct: 366 CRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 425

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 426 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 485

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT+PD
Sbjct: 486 WDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTLPD 545

Query: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 522
           LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME
Sbjct: 546 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 586

[Close]

BLAST of Lsi05G017660 vs. NCBI nr
Match: XP_004134043.1 (pre-mRNA-processing factor 19 [Cucumis sativus])

HSP 1 Score: 1024.6 bits (2648), Expect = 2.9e-295
Identity = 509/521 (97.70%), Postives = 515/521 (98.85%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVISEL 180
           DEARSLLA AERQMPLSSTSF+SNAAAVNVNGKRVNEDEELGPDGKKIRPGIS  VISEL
Sbjct: 121 DEARSLLALAERQMPLSSTSFSSNAAAVNVNGKRVNEDEELGPDGKKIRPGISDAVISEL 180

Query: 181 TDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIATG 240
           T+CNAALSQQRKRRQIP TLVPVEALE YTQISSHPLHKTSKPGI+SLDIHHEKDVIATG
Sbjct: 181 TECNAALSQQRKRRQIPATLVPVEALENYTQISSHPLHKTSKPGIMSLDIHHEKDVIATG 240

Query: 241 GLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300
           GLDTNAVLF RSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN
Sbjct: 241 GLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGNYN 300

Query: 301 CRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360
           CRHILKDHTAEVQAVTVHATN+FFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA
Sbjct: 301 CRHILKDHTAEVQAVTVHATNDFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTSAA 360

Query: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420
           FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL
Sbjct: 361 FHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGVKL 420

Query: 421 WDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTIPD 480
           WDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT+PD
Sbjct: 421 WDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTLPD 480

Query: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 522
           LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME
Sbjct: 481 LSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAME 521

[Close]

BLAST of Lsi05G017660 vs. NCBI nr
Match: KAA0049213.1 (pre-mRNA-processing factor 19 [Cucumis melo var. makuwa])

HSP 1 Score: 1013.4 bits (2619), Expect = 6.8e-292
Identity = 510/548 (93.07%), Postives = 516/548 (94.16%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK
Sbjct: 66  MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 125

Query: 61  PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 120
           PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER
Sbjct: 126 PRQAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKKER 185

Query: 121 DEARSLLAQAERQMPLSSTSFASNAAAVNVNGKR-------------------------- 180
           DEARSLLAQAERQMPLSSTSF+SNA AVNVNGKR                          
Sbjct: 186 DEARSLLAQAERQMPLSSTSFSSNAGAVNVNGKRGLASESSISMDFHEFLCSNLSRFFIL 245

Query: 181 -VNEDEELGPDGKKIRPGISATVISELTDCNAALSQQRKRRQIPPTLVPVEALETYTQIS 240
            VNEDEELGPDGKKIRPGIS TVISELT+CNAALSQQRKRRQIP TLVPVEALE YTQIS
Sbjct: 246 SVNEDEELGPDGKKIRPGISDTVISELTECNAALSQQRKRRQIPATLVPVEALENYTQIS 305

Query: 241 SHPLHKTSKPGIISLDIHHEKDVIATGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFV 300
           SHPLHKTSKPGI+SLDIHHEKDVIATGGLDTNAVLF RSSGEILSTLSGHSKKVTSVKFV
Sbjct: 306 SHPLHKTSKPGILSLDIHHEKDVIATGGLDTNAVLFGRSSGEILSTLSGHSKKVTSVKFV 365

Query: 301 GRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTW 360
           GRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATN+FFVTASLDNTW
Sbjct: 366 GRDDLFLTGSADKTVRVWQQSDDGNYNCRHILKDHTAEVQAVTVHATNDFFVTASLDNTW 425

Query: 361 CFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDG 420
           CFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDG
Sbjct: 426 CFYELASGLCLTQVAEDSETEGYTSAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDG 485

Query: 421 HVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYL 480
           HVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDS+TPTNSVDFDHSGSYL
Sbjct: 486 HVGAVTAISFSENGYFLATAAHDGVKLWDLRKLKNFRTFAPYDSDTPTNSVDFDHSGSYL 545

Query: 481 AIAGSDIRVYQVASVKSEWNCIKTIPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGV 522
           AIAGSDIRVYQVASVKSEWNCIKT+PDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGV
Sbjct: 546 AIAGSDIRVYQVASVKSEWNCIKTLPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGV 605

[Close]

BLAST of Lsi05G017660 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 782.3 bits (2019), Expect = 2.4e-226
Identity = 384/521 (73.70%), Postives = 444/521 (85.22%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+K
Sbjct: 1   MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61  PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVIS 180
           ERDEAR LLA+ ER +P +  +  +NAA    NGKR   DEELGPD KK+ PGISA +I+
Sbjct: 121 ERDEARQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIIT 180

Query: 181 ELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIA 240
           ELTDCNAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIA
Sbjct: 181 ELTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIA 240

Query: 241 TGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 300
           TGG+D  AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGN
Sbjct: 241 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 300

Query: 301 YNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTS 360
           Y C + L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+
Sbjct: 301 YACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTA 360

Query: 361 AAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGV 420
           AAFHPDGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV
Sbjct: 361 AAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV 420

Query: 421 KLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTI 480
           +LWDLRKL+NF++F   D+    NSV+FD SGSYL IA SDI+VYQ ASVK+EWN IKT+
Sbjct: 421 RLWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTL 480

Query: 481 PDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGA 520
           PDLSGTGKATC+KFG DA+Y+AVGSMDRNLRIFG+PG++ A
Sbjct: 481 PDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKA 515

[Close]

BLAST of Lsi05G017660 vs. TAIR 10
Match: AT2G33340.2 (MOS4-associated complex 3B )

HSP 1 Score: 782.3 bits (2019), Expect = 2.4e-226
Identity = 384/521 (73.70%), Postives = 444/521 (85.22%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+K
Sbjct: 1   MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61  PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVIS 180
           ERDEAR LLA+ ER +P +  +  +NAA    NGKR   DEELGPD KK+ PGISA +I+
Sbjct: 121 ERDEARQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIIT 180

Query: 181 ELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIA 240
           ELTDCNAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIA
Sbjct: 181 ELTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIA 240

Query: 241 TGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 300
           TGG+D  AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGN
Sbjct: 241 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 300

Query: 301 YNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTS 360
           Y C + L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+
Sbjct: 301 YACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTA 360

Query: 361 AAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGV 420
           AAFHPDGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV
Sbjct: 361 AAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV 420

Query: 421 KLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTI 480
           +LWDLRKL+NF++F   D+    NSV+FD SGSYL IA SDI+VYQ ASVK+EWN IKT+
Sbjct: 421 RLWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTL 480

Query: 481 PDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGA 520
           PDLSGTGKATC+KFG DA+Y+AVGSMDRNLRIFG+PG++ A
Sbjct: 481 PDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKA 515

[Close]

BLAST of Lsi05G017660 vs. TAIR 10
Match: AT1G04510.1 (MOS4-associated complex 3A )

HSP 1 Score: 775.8 bits (2002), Expect = 2.2e-224
Identity = 388/525 (73.90%), Postives = 448/525 (85.33%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+PEEPVVS+ SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVK
Sbjct: 1   MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61  PKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVIS 180
           ERDE+R LLA+AERQ+P +     SNAA    NGKR  +D E GP+ KK+R GISA VI+
Sbjct: 121 ERDESRQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVIT 180

Query: 181 ELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIA 240
           ELTDCNAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIA
Sbjct: 181 ELTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIA 240

Query: 241 TGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 300
           TGG+DT AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGN
Sbjct: 241 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 300

Query: 301 YNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETE-GYT 360
           Y  RH LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + SE +  YT
Sbjct: 301 YTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYT 360

Query: 361 SAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDG 420
           +AAFHPDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DG
Sbjct: 361 AAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG 420

Query: 421 VKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT 480
           V+LWDLRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIRV+Q ASVK+EWN IKT
Sbjct: 421 VRLWDLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKT 480

Query: 481 IPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMEA 523
           +PDLSGTGKAT +KFG D+KY+AVGSMDRNLRIFG+P +D   ++
Sbjct: 481 LPDLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGLPDDDNTEDS 519

[Close]

BLAST of Lsi05G017660 vs. TAIR 10
Match: AT1G04510.2 (MOS4-associated complex 3A )

HSP 1 Score: 774.6 bits (1999), Expect = 4.9e-224
Identity = 387/525 (73.71%), Postives = 448/525 (85.33%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+PEEPVVS+ SGLL+EKRLI+ HI DYGKCPVTGEP ++DDIVPIKTGKIVK
Sbjct: 1   MNCAISGEVPEEPVVSKKSGLLYEKRLIQTHISDYGKCPVTGEPHTLDDIVPIKTGKIVK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQ EWD L+LSNFALEQQLHTARQELSHALYQHDAACRVIARLKK
Sbjct: 61  PKPLHTASIPGLLGTFQTEWDSLMLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVIS 180
           ERDE+R LLA+AERQ+P +     SNAA    NGKR  +D E GP+ KK+R GISA VI+
Sbjct: 121 ERDESRQLLAEAERQLPAAPEVATSNAAL--SNGKRGIDDGEQGPNAKKMRLGISAEVIT 180

Query: 181 ELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIA 240
           ELTDCNAALSQQRK+RQIP TL  V+ALE +TQ+SSHPLHKT+KPGI S+DI H KDVIA
Sbjct: 181 ELTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDVIA 240

Query: 241 TGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 300
           TGG+DT AVLF R SG+ILSTL+GHSKKVTS+KFVG  DL LT S+DKTVR+W  S+DGN
Sbjct: 241 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 300

Query: 301 YNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETE-GYT 360
           Y  RH LKDH+AEV+AVTVHATN +FV+ASLD+TWCFY+L+SGLCL QV + SE +  YT
Sbjct: 301 YTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYT 360

Query: 361 SAAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDG 420
           +AAFHPDGLILGTGT++++VKIWDVKSQ NVAKF GH G +T+ISFSENGYFLATAA DG
Sbjct: 361 AAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAALDG 420

Query: 421 VKLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKT 480
           V+LWDLRKLKNFRTF   D+    NSV+FDHSGSYL IA SDIRV+Q ASVK+EWN IKT
Sbjct: 421 VRLWDLRKLKNFRTFDFPDA----NSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKT 480

Query: 481 IPDLSGTGKATCLKFGPDAKYLAVGSMDRNLRIFGVPGEDGAMEA 523
           +PDLSGTGK+T +KFG D+KY+AVGSMDRNLRIFG+P +D   ++
Sbjct: 481 LPDLSGTGKSTSVKFGLDSKYIAVGSMDRNLRIFGLPDDDNTEDS 519

[Close]

BLAST of Lsi05G017660 vs. TAIR 10
Match: AT2G33340.3 (MOS4-associated complex 3B )

HSP 1 Score: 727.2 bits (1876), Expect = 9.1e-210
Identity = 359/488 (73.57%), Postives = 413/488 (84.63%), Query Frame = 0


Query: 1   MNCSISGEIPEEPVVSRNSGLLFEKRLIERHILDYGKCPVTGEPLSIDDIVPIKTGKIVK 60
           MNC+ISGE+P EPVVS  SGLLFE+RLIERHI DYGKCPVTGEPL+IDDIVPIKTG+I+K
Sbjct: 1   MNCAISGEVPVEPVVSTKSGLLFERRLIERHISDYGKCPVTGEPLTIDDIVPIKTGEIIK 60

Query: 61  PR--QAASIPGMLGMFQNEWDVLVLSNFALEQQLHTARQELSHALYQHDAACRVIARLKK 120
           P+    ASIPG+LG FQNEWD L+LSNFALEQQLHTARQELSHALYQHD+ACRVIARLKK
Sbjct: 61  PKTLHTASIPGLLGTFQNEWDGLMLSNFALEQQLHTARQELSHALYQHDSACRVIARLKK 120

Query: 121 ERDEARSLLAQAERQMPLSSTSFASNAAAVNVNGKRVNEDEELGPDGKKIRPGISATVIS 180
           ERDEAR LLA+ ER +P +  +  +NAA    NGKR   DEELGPD KK+ PGISA +I+
Sbjct: 121 ERDEARQLLAEVERHIPAAPEAVTANAAL--SNGKRAAVDEELGPDAKKLCPGISAEIIT 180

Query: 181 ELTDCNAALSQQRKRRQIPPTLVPVEALETYTQISSHPLHKTSKPGIISLDIHHEKDVIA 240
           ELTDCNAALSQ+RK+RQIP TL  ++ LE +TQ+SSHPLHKT+KPGI S+DI H KDVIA
Sbjct: 181 ELTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDVIA 240

Query: 241 TGGLDTNAVLFSRSSGEILSTLSGHSKKVTSVKFVGRDDLFLTGSADKTVRVWQQSDDGN 300
           TGG+D  AVLF R SG+ILSTL+GHSKKVTSVKFVG  DL LT SADKTVR+W+   DGN
Sbjct: 241 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 300

Query: 301 YNCRHILKDHTAEVQAVTVHATNNFFVTASLDNTWCFYELASGLCLTQVAEDSETEGYTS 360
           Y C + L DH+AEV+AVTVH TN +FV+ASLD TWCFY+L+SG CL QV++DS+   YT+
Sbjct: 301 YACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTA 360

Query: 361 AAFHPDGLILGTGTSEALVKIWDVKSQKNVAKFDGHVGAVTAISFSENGYFLATAAHDGV 420
           AAFHPDGLILGTGTS+++VKIWDVKSQ NVAKFDGH G VTAISFSENGYFLATAA DGV
Sbjct: 361 AAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAEDGV 420

Query: 421 KLWDLRKLKNFRTFAPYDSETPTNSVDFDHSGSYLAIAGSDIRVYQVASVKSEWNCIKTI 480
           +LWDLRKL+NF++F   D+    NSV+FD SGSYL IA SDI+VYQ ASVK+EWN IKT+
Sbjct: 421 RLWDLRKLRNFKSFLSADA----NSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTL 480

Query: 481 PDLSGTGK 487
           PDLSGTGK
Sbjct: 481 PDLSGTGK 482

The following BLAST results are available for this feature:

BLAST of Lsi05G017660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9AV81	8.8e-234	75.14	Pre-mRNA-processing factor 19 OS=Oryza sativa subsp. japonica OX=39947 GN=PRP19 ...	[more]
O22785	3.3e-225	73.70	Pre-mRNA-processing factor 19 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=PRP19...	[more]
Q94BR4	3.1e-223	73.90	Pre-mRNA-processing factor 19 homolog 1 OS=Arabidopsis thaliana OX=3702 GN=PRP19...	[more]
Q9UMS4	2.6e-108	43.24	Pre-mRNA-processing factor 19 OS=Homo sapiens OX=9606 GN=PRPF19 PE=1 SV=1	[more]
Q08E38	7.4e-108	43.05	Pre-mRNA-processing factor 19 OS=Bos taurus OX=9913 GN=PRPF19 PE=2 SV=1	[more]

BLAST of Lsi05G017660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D0U3	1.3e-296	97.89	Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A1S3AWF5	1.3e-296	97.89	Pre-mRNA-processing factor 19 OS=Cucumis melo OX=3656 GN=LOC103483553 PE=3 SV=1	[more]
A0A0A0L6Z6	1.4e-295	97.70	Pre-mRNA-processing factor 19 OS=Cucumis sativus OX=3659 GN=Csa_3G134680 PE=3 SV...	[more]
A0A5A7U025	3.3e-292	93.07	Pre-mRNA-processing factor 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A6J1FIG8	8.1e-291	96.55	Pre-mRNA-processing factor 19 OS=Cucurbita moschata OX=3662 GN=LOC111445620 PE=3...	[more]

BLAST of Lsi05G017660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891633.1	4.9e-298	98.47	pre-mRNA-processing factor 19 [Benincasa hispida]	[more]
XP_008438467.1	2.7e-296	97.89	PREDICTED: pre-mRNA-processing factor 19 [Cucumis melo]	[more]
TYK17345.1	2.7e-296	97.89	pre-mRNA-processing factor 19 [Cucumis melo var. makuwa]	[more]
XP_004134043.1	2.9e-295	97.70	pre-mRNA-processing factor 19 [Cucumis sativus]	[more]
KAA0049213.1	6.8e-292	93.07	pre-mRNA-processing factor 19 [Cucumis melo var. makuwa]	[more]

BLAST of Lsi05G017660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G33340.1	2.4e-226	73.70	MOS4-associated complex 3B	[more]
AT2G33340.2	2.4e-226	73.70	MOS4-associated complex 3B	[more]
AT1G04510.1	2.2e-224	73.90	MOS4-associated complex 3A	[more]
AT1G04510.2	4.9e-224	73.71	MOS4-associated complex 3A	[more]
AT2G33340.3	9.1e-210	73.57	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 113..133
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 391..424 score: 8.65015
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 260..292 score: 11.919224
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 349..384 score: 8.57106
None	No IPR available	CDD	cd00200	WD40	coord: 224..511 e-value: 1.26163E-54 score: 183.69
None	No IPR available	CDD	cd16656	RING-Ubox_PRP19	coord: 3..54 e-value: 4.48818E-29 score: 106.896
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 1..53
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 384..422 e-value: 2.5E-8 score: 43.7 coord: 208..250 e-value: 7.1 score: 11.6 coord: 253..292 e-value: 7.4E-9 score: 45.4 coord: 425..464 e-value: 2.4 score: 14.6 coord: 471..512 e-value: 0.0024 score: 27.1 coord: 298..337 e-value: 3.1E-5 score: 33.4 coord: 340..381 e-value: 0.95 score: 17.1
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 473..511 e-value: 0.002 score: 18.9 coord: 386..422 e-value: 9.3E-4 score: 20.0 coord: 255..291 e-value: 9.3E-7 score: 29.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 391..431 score: 11.009724
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 349..390 score: 11.243651
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 260..292 score: 14.41838
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 1..66 e-value: 6.9E-22 score: 88.7
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 1..70 score: 24.203602
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 1..60 e-value: 7.5E-24 score: 85.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 200..513 e-value: 2.6E-84 score: 284.6
IPR013915	Pre-mRNA-splicing factor 19	PFAM	PF08606	Prp19	coord: 64..129 e-value: 7.9E-30 score: 102.7
IPR038959	Pre-mRNA-processing factor 19	PANTHER	PTHR43995	PRE-MRNA-PROCESSING FACTOR 19	coord: 1..521
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 221..511

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G017660.1	Lsi05G017660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006281	DNA repair
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0070534	protein K63-linked ubiquitination
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0000974	Prp19 complex
cellular_component	GO:0071006	U2-type catalytic step 1 spliceosome
molecular_function	GO:0005515	protein binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity