Lsi05G017560 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G017560
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	protein NRT1/ PTR FAMILY 5.2-like
Location	chr05: 24951471 .. 24953957 (+)
RNA-Seq Expression	Lsi05G017560
Synteny	Lsi05G017560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGTAAGTGATCCAGAAAAGTCTTGCTCAATTATTTTTATCCATTTCTTAGTCAAAACTAAAATTGAATACCAGATATAAATTTAAAAGATATTTTTAATTGTTTTAGTAACAAAGGTTGAAAATATCTTAGTAGTAAGACCAACTTGTGTATTTTTAACTTGTATGTTTTTTTAGTAGATAAAATCATATACATTAAATTTTAATTTTGGTATGTATATGGAATTTTAAATTTATCAGTTTCTATTTTCTTTTATCTAATTTTAGGATGTTTAATTTAGTCACTCAACTCATAACTTAATAGATCATAAGACATAGACATATACATAATACTTATATACAGATTATTAAAATTCACATCATTATAGTCACCTCATTAAATATTGAGTAATACTTGAGTGCAGCATATGTTGTACCTATCTCCATGTATTCTCTTTAATAACAAAGGAAAGAAATGATTAAAAAATAGAAAAGTTTACCACATAGCAAATTGTGATAACACTTGAGTAAACTGTACGAAAATTAGTGCAGCCTGAGATGCGCATCAAGTATTTTTTTTTTTAATATTTTTTAATTGCAATTTTCCTTTAAAAAAAAAATTTGGGTTGACTAATGGTGAGAGAGAGAGGATGTGTGTAGTATATAAAAGGATGAAGTAGGAGTTGGGTCTTTACTACTCATAGAGTTTGAGTTGTAAAGTTGAACAAAAGCTAAGGCTTAAAATTTCAACGTTTCTAAACCCAAGAAGTTGTAGTAATAATATGGTTGCTTCTGCTGCTGAAGAAACTGGCCTTGACGACTACACCAAAGATGGAACCGTCGATCTCAAAGGCAACCTCATCCTCCGCTCCCGACGTGGCCGTTGGAAAGCTTGCTCCTTCATCGTCGGTAAGTGTTACACTCTGCTCGAGATTACTTTCCTGAACTTAAGACAAACAAATAGGCTCAATTATTGTCGTCACAGTTCATCTTAAGTTTACTTGGTATAGTAATCTAGGATGCAGTTTGGAAAATTCTTATATGAGTTACTTACAGTATACGAAGTGTTTGAACGGATGGCGTATTACGGGATATCGACAAATCTAATAATATACTTAACGAAGAAGTTGCATCAAGGCACAGTGACATCGGCCAACAATGTCACCAACTGGTCTGGAACTGTTTGGATGATGCCAATCTTGGGGGCGTACGTCGCTGATGCTCATCTTGGCCGCTACCGAACCTTTCTTGTCGCTTCCGCCATCTGCTTTACGGTATGTTTCTTAACCAACTAATCTATTTTGCGCACCCCCAAGATATAATGAGTCTCATAAATTCATTGGTCTTATCCATTGCAATTCTTTAGCTATCTCGTTCATTGTTTCTCTTCTTTAATAGAACAATGGGACAACAAAATTAATTTCTTACCTAGCTTGCATTTTTACACTTCAAAGATATGCACGTTTTAGTTCATTTTAATTGAATTAAACGAGTGACAGTGAGGCAAGATTTGATTTTATGACATTTTAATTGAAGATATATATATATACACACACTAACCAGTTTGGTTATAGTGACCAAGTTGACAAATAAAGTTAATTAAATATATGGTTCAATTGGTCATTCTATCACTTGAAATTTGAAATTTGAAATTTTTCGGTTTTTATTTTTGAAGTACAAAGTTAACAAGATAAAACCACAATCTAGCCTATATAAATATAAGAGCTAGATAGGCTTGGACGATGACATATTATAAAATTTTAAAAGTGCCATAACCAAATAAATACAATATCAAGATTGGTGAGAAAAAATTTAAAATATAAAATTTAAATAAACATAACATTAAAAAAATATATAAGAACTAAATAAACAAATATTTGAAAATTTAGAAATATCTTAAAAACCTTTTAAAATTTACAAACGAGATAGATACAACTTTGAAAAGTTTAATGACTTGTTTCTAATATTTTAAAGTATAAGAAGACGTAAAAAAACAGGTGAAAATAATACTTTAAAATATCTACCTCAAAACTAAAAGAACTCTAATTAACTCTAACGTTAAGATCTCATTTCTTTTCTTTTTCTTTCACGATATCGTGTTCCCTGGAAAGAGACACAGTTATCTAAAAATATTATATTACCTACTAATTTTTTTTTATAAAAAAGTATTAATGTAAATGTAAGTGGATGTGTGTATATATATTTATAGACAAGATAAGTACATAATGAATCATAATTAAATCCTTCTGTTCTAAATTAGATTAAGGTTAAAATATTTTTAGATCACAGTTCAACACGAGGTATACAAGTATATAGTCAGTAAACGTATTTATTATTAAATTTCATTACAATTAGAATCTTTCAAATCTATTCAGTACGATGTCCATTTATATTTTCATATTGTAATATTAAAAAATAATCACATAATTTACATTTTTAAAAAAAAATTGATACCATGTGGAGTATTTATTTTTGTAGTGTTGGTCTTTGAGAAGGGAATCATAG

mRNA sequence

ATGAAAAGTTTGAGTTGTAAAGTTGAACAAAAGCTAAGGCTTAAAATTTCAACGTTTCTAAACCCAAGAAGTTGTAGTAATAATATGGTTGCTTCTGCTGCTGAAGAAACTGGCCTTGACGACTACACCAAAGATGGAACCGTCGATCTCAAAGGCAACCTCATCCTCCGCTCCCGACGTGGCCGTTGGAAAGCTTGCTCCTTCATCGTCGTATACGAAGTGTTTGAACGGATGGCGTATTACGGGATATCGACAAATCTAATAATATACTTAACGAAGAAGTTGCATCAAGGCACAGTGACATCGGCCAACAATGTCACCAACTGGTCTGGAACTGTTTGGATGATGCCAATCTTGGGGGCGTACGTCGCTGATGCTCATCTTGGCCGCTACCGAACCTTTCTTGTCGCTTCCGCCATCTGCTTTACGATCACAGTTCAACACGAGTGTTGGTCTTTGAGAAGGGAATCATAG

Coding sequence (CDS)

ATGAAAAGTTTGAGTTGTAAAGTTGAACAAAAGCTAAGGCTTAAAATTTCAACGTTTCTAAACCCAAGAAGTTGTAGTAATAATATGGTTGCTTCTGCTGCTGAAGAAACTGGCCTTGACGACTACACCAAAGATGGAACCGTCGATCTCAAAGGCAACCTCATCCTCCGCTCCCGACGTGGCCGTTGGAAAGCTTGCTCCTTCATCGTCGTATACGAAGTGTTTGAACGGATGGCGTATTACGGGATATCGACAAATCTAATAATATACTTAACGAAGAAGTTGCATCAAGGCACAGTGACATCGGCCAACAATGTCACCAACTGGTCTGGAACTGTTTGGATGATGCCAATCTTGGGGGCGTACGTCGCTGATGCTCATCTTGGCCGCTACCGAACCTTTCTTGTCGCTTCCGCCATCTGCTTTACGATCACAGTTCAACACGAGTGTTGGTCTTTGAGAAGGGAATCATAG

Protein sequence

MKSLSCKVEQKLRLKISTFLNPRSCSNNMVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFTITVQHECWSLRRES

Homology

[Close]

BLAST of Lsi05G017560 vs. ExPASy Swiss-Prot
Match: Q9FNL8 (Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.3e-43
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 35  EETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKK 94
           EE G DDYTKDGTVDL+GN + RS+ GRWKACSF+VVYEVFERMAYYGIS+NL+IY+T K
Sbjct: 4   EEVG-DDYTKDGTVDLRGNRVRRSQTGRWKACSFVVVYEVFERMAYYGISSNLVIYMTTK 63

Query: 95  LHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           LHQGTV S+NNVTNW GT W+ PILGAYVADAH GRY TF+++SAI
Sbjct: 64  LHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAI 108

[Close]

BLAST of Lsi05G017560 vs. ExPASy Swiss-Prot
Match: Q9FNL7 (Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-41
Identity = 82/109 (75.23%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 35  EETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKK 94
           EE G DDYTKDGTVDL+GN + RS RGRWKACSF+VVYEVFERMAYYGIS+NL IY+T K
Sbjct: 4   EEVG-DDYTKDGTVDLQGNPVRRSIRGRWKACSFVVVYEVFERMAYYGISSNLFIYMTTK 63

Query: 95  LHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           LHQGTV S+NNVTNW GT W+ PILGAYV DA LGRY TF+++ AI F+
Sbjct: 64  LHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFS 111

[Close]

BLAST of Lsi05G017560 vs. ExPASy Swiss-Prot
Match: Q8VZR7 (Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 4.5e-32
Identity = 59/99 (59.60%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 42  YTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVT 101
           YT+DGTVDL+G  +L S+ GRW+ACSF++ YE FERMA+YGI++NL+ YLTK+LH+ T++
Sbjct: 7   YTQDGTVDLQGRPVLASKTGRWRACSFLLGYEAFERMAFYGIASNLVNYLTKRLHEDTIS 66

Query: 102 SANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           S  NV NWSG VW+ PI GAY+AD+++GR+ TF  +S I
Sbjct: 67  SVRNVNNWSGAVWITPIAGAYIADSYIGRFWTFTASSLI 105

[Close]

BLAST of Lsi05G017560 vs. ExPASy Swiss-Prot
Match: Q9M390 (Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 4.8e-26
Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 40  DDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGT 99
           D YT+DGTVD+  N   + + G WKAC FI+  E  ER+AYYG+ TNL+ YL  +L+QG 
Sbjct: 5   DVYTQDGTVDIHKNPANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGN 64

Query: 100 VTSANNVTNWSGTVWMMPILGAYVADAHLGRYRT 134
            T+ANNVTNWSGT ++ P++GA++ADA+LGRY T
Sbjct: 65  ATAANNVTNWSGTCYITPLIGAFIADAYLGRYWT 98

[Close]

BLAST of Lsi05G017560 vs. ExPASy Swiss-Prot
Match: P46032 (Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.8e-25
Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 42  YTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVT 101
           Y +DG+VD  GN  L+ + G WKAC FI+  E  ER+AYYGI+ NLI YLT KLHQG V+
Sbjct: 24  YAEDGSVDFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVS 83

Query: 102 SANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICF 143
           +A NVT W GT ++ P++GA +ADA+ GRY T    S I F
Sbjct: 84  AATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYF 124

[Close]

BLAST of Lsi05G017560 vs. ExPASy TrEMBL
Match: A0A0A0L706 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134770 PE=3 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 1.3e-55
Identity = 109/115 (94.78%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEETGLDDYTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLI
Sbjct: 1   MAASAAEETGLDDYTKDGTVDLKGNPVLRSQRGRWKACSFIVVYEVFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           IYLTKKLHQGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRYRTFLVASAIC T
Sbjct: 61  IYLTKKLHQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLVASAICLT 115

[Close]

BLAST of Lsi05G017560 vs. ExPASy TrEMBL
Match: A0A5D3D248 (Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001890 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.6e-54
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 31  ASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIY 90
           ASAAEETGLD YTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLIIY
Sbjct: 4   ASAAEETGLDGYTKDGTVDLKGNPVLRSQRGRWKACSFIVVYEVFERMAYYGISTNLIIY 63

Query: 91  LTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           LTKKLHQGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRYRTFL+ASAIC T
Sbjct: 64  LTKKLHQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLIASAICLT 116

[Close]

BLAST of Lsi05G017560 vs. ExPASy TrEMBL
Match: A0A1S3AW47 (protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo OX=3656 GN=LOC103483562 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 5.6e-54
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 31  ASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIY 90
           ASAAEETGLD YTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLIIY
Sbjct: 4   ASAAEETGLDGYTKDGTVDLKGNPVLRSQRGRWKACSFIVVYEVFERMAYYGISTNLIIY 63

Query: 91  LTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           LTKKLHQGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRYRTFL+ASAIC T
Sbjct: 64  LTKKLHQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLIASAICLT 116

[Close]

BLAST of Lsi05G017560 vs. ExPASy TrEMBL
Match: A0A6J1IQK5 (protein NRT1/ PTR FAMILY 5.2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479112 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 103/115 (89.57%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEE+G+DDYTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLI
Sbjct: 1   MAASAAEESGVDDYTKDGTVDLKGNPVLRSKRGRWKACSFIVVYEVFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           I+LTKKLHQGTV SANNVTNWSGTVW+MPILGAY+ADAHLGRYRTFL+ASAIC T
Sbjct: 61  IFLTKKLHQGTVASANNVTNWSGTVWIMPILGAYIADAHLGRYRTFLIASAICLT 115

[Close]

BLAST of Lsi05G017560 vs. ExPASy TrEMBL
Match: A0A6J1E956 (protein NRT1/ PTR FAMILY 5.2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111431935 PE=3 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 1.3e-53
Identity = 103/115 (89.57%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEE+G+DDYTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLI
Sbjct: 1   MAASAAEESGVDDYTKDGTVDLKGNPVLRSKRGRWKACSFIVVYEVFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           I+LTKKLHQGTV SANNVTNWSGTVW+MPILGAY+ADAHLGRYRTFL+ASAIC T
Sbjct: 61  IFLTKKLHQGTVASANNVTNWSGTVWIMPILGAYIADAHLGRYRTFLIASAICLT 115

[Close]

BLAST of Lsi05G017560 vs. NCBI nr
Match: XP_004134403.1 (protein NRT1/ PTR FAMILY 5.2 [Cucumis sativus] >KGN56829.1 hypothetical protein Csa_010954 [Cucumis sativus])

HSP 1 Score: 225.7 bits (574), Expect = 2.8e-55
Identity = 109/115 (94.78%), Postives = 112/115 (97.39%), Query Frame = 0


Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEETGLDDYTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLI
Sbjct: 1   MAASAAEETGLDDYTKDGTVDLKGNPVLRSQRGRWKACSFIVVYEVFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           IYLTKKLHQGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRYRTFLVASAIC T
Sbjct: 61  IYLTKKLHQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLVASAICLT 115

[Close]

BLAST of Lsi05G017560 vs. NCBI nr
Match: XP_038875745.1 (protein NRT1/ PTR FAMILY 5.2-like [Benincasa hispida])

HSP 1 Score: 220.7 bits (561), Expect = 8.9e-54
Identity = 108/115 (93.91%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEETGLDDYTKDGTVDLKGN ILRSRRGRWKACSFIVVYE+FERMAYYGISTNLI
Sbjct: 1   MAASAAEETGLDDYTKDGTVDLKGNPILRSRRGRWKACSFIVVYEMFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           IYLTKKL+QGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRY TFLVASAIC T
Sbjct: 61  IYLTKKLNQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYWTFLVASAICLT 115

[Close]

BLAST of Lsi05G017560 vs. NCBI nr
Match: XP_008438477.1 (PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo] >KAA0049224.1 protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa] >TYK17334.1 protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo var. makuwa])

HSP 1 Score: 220.3 bits (560), Expect = 1.2e-53
Identity = 106/113 (93.81%), Postives = 110/113 (97.35%), Query Frame = 0


Query: 31  ASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIY 90
           ASAAEETGLD YTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLIIY
Sbjct: 4   ASAAEETGLDGYTKDGTVDLKGNPVLRSQRGRWKACSFIVVYEVFERMAYYGISTNLIIY 63

Query: 91  LTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           LTKKLHQGTVTSANNVTNWSGTVW+MPILGAYVADAHLGRYRTFL+ASAIC T
Sbjct: 64  LTKKLHQGTVTSANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLIASAICLT 116

[Close]

BLAST of Lsi05G017560 vs. NCBI nr
Match: XP_023526697.1 (protein NRT1/ PTR FAMILY 5.2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 219.5 bits (558), Expect = 2.0e-53
Identity = 104/115 (90.43%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEE+G+DDYTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLI
Sbjct: 1   MAASAAEESGVDDYTKDGTVDLKGNPVLRSKRGRWKACSFIVVYEVFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           I+LTKKLHQGTV SANNVTNWSGTVW+MPILGAYVADAHLGRYRTFL+ASAIC T
Sbjct: 61  IFLTKKLHQGTVASANNVTNWSGTVWIMPILGAYVADAHLGRYRTFLIASAICLT 115

[Close]

BLAST of Lsi05G017560 vs. NCBI nr
Match: XP_022979366.1 (protein NRT1/ PTR FAMILY 5.2-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 219.2 bits (557), Expect = 2.6e-53
Identity = 103/115 (89.57%), Postives = 111/115 (96.52%), Query Frame = 0


Query: 29  MVASAAEETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLI 88
           M ASAAEE+G+DDYTKDGTVDLKGN +LRS+RGRWKACSFIVVYEVFERMAYYGISTNLI
Sbjct: 1   MAASAAEESGVDDYTKDGTVDLKGNPVLRSKRGRWKACSFIVVYEVFERMAYYGISTNLI 60

Query: 89  IYLTKKLHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           I+LTKKLHQGTV SANNVTNWSGTVW+MPILGAY+ADAHLGRYRTFL+ASAIC T
Sbjct: 61  IFLTKKLHQGTVASANNVTNWSGTVWIMPILGAYIADAHLGRYRTFLIASAICLT 115

[Close]

BLAST of Lsi05G017560 vs. TAIR 10
Match: AT5G46040.1 (Major facilitator superfamily protein )

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-44
Identity = 82/106 (77.36%), Postives = 94/106 (88.68%), Query Frame = 0


Query: 35  EETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKK 94
           EE G DDYTKDGTVDL+GN + RS+ GRWKACSF+VVYEVFERMAYYGIS+NL+IY+T K
Sbjct: 4   EEVG-DDYTKDGTVDLRGNRVRRSQTGRWKACSFVVVYEVFERMAYYGISSNLVIYMTTK 63

Query: 95  LHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           LHQGTV S+NNVTNW GT W+ PILGAYVADAH GRY TF+++SAI
Sbjct: 64  LHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAI 108

[Close]

BLAST of Lsi05G017560 vs. TAIR 10
Match: AT5G46050.1 (peptide transporter 3 )

HSP 1 Score: 170.2 bits (430), Expect = 1.3e-42
Identity = 82/109 (75.23%), Postives = 93/109 (85.32%), Query Frame = 0


Query: 35  EETGLDDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKK 94
           EE G DDYTKDGTVDL+GN + RS RGRWKACSF+VVYEVFERMAYYGIS+NL IY+T K
Sbjct: 4   EEVG-DDYTKDGTVDLQGNPVRRSIRGRWKACSFVVVYEVFERMAYYGISSNLFIYMTTK 63

Query: 95  LHQGTVTSANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICFT 144
           LHQGTV S+NNVTNW GT W+ PILGAYV DA LGRY TF+++ AI F+
Sbjct: 64  LHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFS 111

[Close]

BLAST of Lsi05G017560 vs. TAIR 10
Match: AT2G40460.1 (Major facilitator superfamily protein )

HSP 1 Score: 139.0 bits (349), Expect = 3.2e-33
Identity = 59/99 (59.60%), Postives = 81/99 (81.82%), Query Frame = 0


Query: 42  YTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVT 101
           YT+DGTVDL+G  +L S+ GRW+ACSF++ YE FERMA+YGI++NL+ YLTK+LH+ T++
Sbjct: 7   YTQDGTVDLQGRPVLASKTGRWRACSFLLGYEAFERMAFYGIASNLVNYLTKRLHEDTIS 66

Query: 102 SANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAI 141
           S  NV NWSG VW+ PI GAY+AD+++GR+ TF  +S I
Sbjct: 67  SVRNVNNWSGAVWITPIAGAYIADSYIGRFWTFTASSLI 105

[Close]

BLAST of Lsi05G017560 vs. TAIR 10
Match: AT3G54140.1 (peptide transporter 1 )

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-27
Identity = 53/94 (56.38%), Postives = 71/94 (75.53%), Query Frame = 0


Query: 40  DDYTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGT 99
           D YT+DGTVD+  N   + + G WKAC FI+  E  ER+AYYG+ TNL+ YL  +L+QG 
Sbjct: 5   DVYTQDGTVDIHKNPANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGN 64

Query: 100 VTSANNVTNWSGTVWMMPILGAYVADAHLGRYRT 134
            T+ANNVTNWSGT ++ P++GA++ADA+LGRY T
Sbjct: 65  ATAANNVTNWSGTCYITPLIGAFIADAYLGRYWT 98

[Close]

BLAST of Lsi05G017560 vs. TAIR 10
Match: AT2G02040.1 (peptide transporter 2 )

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-26
Identity = 55/101 (54.46%), Postives = 70/101 (69.31%), Query Frame = 0


Query: 42  YTKDGTVDLKGNLILRSRRGRWKACSFIVVYEVFERMAYYGISTNLIIYLTKKLHQGTVT 101
           Y +DG+VD  GN  L+ + G WKAC FI+  E  ER+AYYGI+ NLI YLT KLHQG V+
Sbjct: 24  YAEDGSVDFNGNPPLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVS 83

Query: 102 SANNVTNWSGTVWMMPILGAYVADAHLGRYRTFLVASAICF 143
           +A NVT W GT ++ P++GA +ADA+ GRY T    S I F
Sbjct: 84  AATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYF 124

The following BLAST results are available for this feature:

BLAST of Lsi05G017560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FNL8	3.3e-43	77.36	Protein NRT1/ PTR FAMILY 5.3 OS=Arabidopsis thaliana OX=3702 GN=NPF5.3 PE=2 SV=1	[more]
Q9FNL7	1.8e-41	75.23	Protein NRT1/ PTR FAMILY 5.2 OS=Arabidopsis thaliana OX=3702 GN=NPF5.2 PE=2 SV=1	[more]
Q8VZR7	4.5e-32	59.60	Protein NRT1/ PTR FAMILY 5.1 OS=Arabidopsis thaliana OX=3702 GN=NPF5.1 PE=2 SV=2	[more]
Q9M390	4.8e-26	56.38	Protein NRT1/ PTR FAMILY 8.1 OS=Arabidopsis thaliana OX=3702 GN=NPF8.1 PE=1 SV=1	[more]
P46032	1.8e-25	54.46	Protein NRT1/ PTR FAMILY 8.3 OS=Arabidopsis thaliana OX=3702 GN=NPF8.3 PE=1 SV=1	[more]

BLAST of Lsi05G017560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L706	1.3e-55	94.78	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G134770 PE=3 SV=1	[more]
A0A5D3D248	5.6e-54	93.81	Protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3AW47	5.6e-54	93.81	protein NRT1/ PTR FAMILY 5.2-like OS=Cucumis melo OX=3656 GN=LOC103483562 PE=3 S...	[more]
A0A6J1IQK5	1.3e-53	89.57	protein NRT1/ PTR FAMILY 5.2-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC1...	[more]
A0A6J1E956	1.3e-53	89.57	protein NRT1/ PTR FAMILY 5.2-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Lsi05G017560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134403.1	2.8e-55	94.78	protein NRT1/ PTR FAMILY 5.2 [Cucumis sativus] >KGN56829.1 hypothetical protein ...	[more]
XP_038875745.1	8.9e-54	93.91	protein NRT1/ PTR FAMILY 5.2-like [Benincasa hispida]	[more]
XP_008438477.1	1.2e-53	93.81	PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Cucumis melo] >KAA0049224.1 protei...	[more]
XP_023526697.1	2.0e-53	90.43	protein NRT1/ PTR FAMILY 5.2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022979366.1	2.6e-53	89.57	protein NRT1/ PTR FAMILY 5.2-like isoform X1 [Cucurbita maxima]	[more]

BLAST of Lsi05G017560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G46040.1	2.3e-44	77.36	Major facilitator superfamily protein	[more]
AT5G46050.1	1.3e-42	75.23	peptide transporter 3	[more]
AT2G40460.1	3.2e-33	59.60	Major facilitator superfamily protein	[more]
AT3G54140.1	3.4e-27	56.38	peptide transporter 1	[more]
AT2G02040.1	1.3e-26	54.46	peptide transporter 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 34..148 e-value: 4.8E-37 score: 129.3
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 62..142
None	No IPR available	PANTHER	PTHR11654:SF73	PROTEIN NRT1/ PTR FAMILY 5.2-LIKE	coord: 47..142
IPR000109	Proton-dependent oligopeptide transporter family	PANTHER	PTHR11654	OLIGOPEPTIDE TRANSPORTER-RELATED	coord: 47..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G017560.1	Lsi05G017560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035442	dipeptide transmembrane transport
biological_process	GO:0006817	phosphate ion transport
biological_process	GO:0050896	response to stimulus
biological_process	GO:0042939	tripeptide transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0071916	dipeptide transmembrane transporter activity
molecular_function	GO:0042937	tripeptide transmembrane transporter activity
molecular_function	GO:0022857	transmembrane transporter activity