Lsi05G017230 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G017230
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Ethylene-responsive transcription factor
Location	chr05: 24669627 .. 24670049 (+)
RNA-Seq Expression	Lsi05G017230
Synteny	Lsi05G017230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAGAGTGGAGGCCGTGGAAGAGGTTATGCGGAGGATTCGACGACGGCTGGAGGCGGCAGAGAGATCCGTTACCGGGGAGTACGGCGGCGGCCATGGGGAAAATTCGCTGCTGAGATACGTGACTCTAGAAGGCAAGGAGTTCGCATATGGCTGGGAACTTTCAACACGGCGGAAGAAGCCGCACGTGCTTACGATCGAGCGGCGTACAACATGAGGGGTCATTTGGCCATTTTGAACTTTCCGAATGAATATCCACTCACCAGCTCCGGCGGCGGCGGCGGTTATTCAAGTGGGTCGTCTTCATCTTCTTCTTCAATGTCAATGCGGCAAAATGAAGTGATTGAATTTGAGTATTTGGATGATAAAGTGCTTGAAGATCTTCTTGACTATGGAGAAGAAAGTGATAAGAGAAGCTAA

mRNA sequence

ATGGACGAGAGTGGAGGCCGTGGAAGAGGTTATGCGGAGGATTCGACGACGGCTGGAGGCGGCAGAGAGATCCGTTACCGGGGAGTACGGCGGCGGCCATGGGGAAAATTCGCTGCTGAGATACGTGACTCTAGAAGGCAAGGAGTTCGCATATGGCTGGGAACTTTCAACACGGCGGAAGAAGCCGCACGTGCTTACGATCGAGCGGCGTACAACATGAGGGGTCATTTGGCCATTTTGAACTTTCCGAATGAATATCCACTCACCAGCTCCGGCGGCGGCGGCGGTTATTCAAGTGGGTCGTCTTCATCTTCTTCTTCAATGTCAATGCGGCAAAATGAAGTGATTGAATTTGAGTATTTGGATGATAAAGTGCTTGAAGATCTTCTTGACTATGGAGAAGAAAGTGATAAGAGAAGCTAA

Coding sequence (CDS)

ATGGACGAGAGTGGAGGCCGTGGAAGAGGTTATGCGGAGGATTCGACGACGGCTGGAGGCGGCAGAGAGATCCGTTACCGGGGAGTACGGCGGCGGCCATGGGGAAAATTCGCTGCTGAGATACGTGACTCTAGAAGGCAAGGAGTTCGCATATGGCTGGGAACTTTCAACACGGCGGAAGAAGCCGCACGTGCTTACGATCGAGCGGCGTACAACATGAGGGGTCATTTGGCCATTTTGAACTTTCCGAATGAATATCCACTCACCAGCTCCGGCGGCGGCGGCGGTTATTCAAGTGGGTCGTCTTCATCTTCTTCTTCAATGTCAATGCGGCAAAATGAAGTGATTGAATTTGAGTATTTGGATGATAAAGTGCTTGAAGATCTTCTTGACTATGGAGAAGAAAGTGATAAGAGAAGCTAA

Protein sequence

MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEYLDDKVLEDLLDYGEESDKRS

Homology

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BLAST of Lsi05G017230 vs. ExPASy Swiss-Prot
Match: Q9LTC6 (Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 GN=ERF095 PE=1 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 4.2e-34
Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0


Query: 23  EIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNF 82
           E++YRGVR+RPWGK+AAEIRDS R G R+WLGTFNTAE+AARAYDRAA+ MRG  AILNF
Sbjct: 11  EMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNF 70

Query: 83  PNEYPLTSSGGGGGYSSGSSSSSSSM-----SMRQNEVIEFEYLDDKVLEDLLDYGEESD 139
           P+EY +   G  G + +  +SSSS            EVIEFEYLDD +LE+LLDYGE S+
Sbjct: 71  PHEYQMMKDGPNGSHENAVASSSSGYRGGGGGDDGREVIEFEYLDDSLLEELLDYGERSN 130

[Close]

BLAST of Lsi05G017230 vs. ExPASy Swiss-Prot
Match: P93822 (Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=ERF14 PE=2 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.5e-34
Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 3   ESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEA 62
           + GGR  G     +  GG  + +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+A
Sbjct: 2   DQGGRSSG-----SGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDA 61

Query: 63  ARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEYLD 122
           ARAYDRAAY+MRG  AILNFP+EY +          +GSSS++++ S    +V EFEYLD
Sbjct: 62  ARAYDRAAYSMRGKAAILNFPHEYNM---------GTGSSSTAANSSSSSQQVFEFEYLD 121

Query: 123 DKVLEDLLDYGEESDK 139
           D VL++LL+YGE  +K
Sbjct: 122 DSVLDELLEYGENYNK 123

[Close]

BLAST of Lsi05G017230 vs. ExPASy Swiss-Prot
Match: Q9LTC5 (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 GN=ERF098 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 9.5e-34
Identity = 82/126 (65.08%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 22  REIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILN 81
           ++ R+RGVRRRPWGKFAAEIRD  R G R+WLGTF TAEEAARAYDRAA+N+RGHLAILN
Sbjct: 16  KQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILN 75

Query: 82  FPNEY-----------PLTSSGGGGGYSSGSSSSSSSMSMRQN--EVIEFEYLDDKVLED 135
           FPNEY           P  SS      SS SS S+S+   RQN  EV EFEYLDDKVLE+
Sbjct: 76  FPNEYYPRMDDYSLRPPYASSS-----SSSSSGSTSTNVSRQNQREVFEFEYLDDKVLEE 135

[Close]

BLAST of Lsi05G017230 vs. ExPASy Swiss-Prot
Match: Q9LSX0 (Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 GN=ERF096 PE=1 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.2e-33
Identity = 81/136 (59.56%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 3   ESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEA 62
           + GGRG G AE           +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEA
Sbjct: 2   DQGGRGVG-AEHG---------KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEA 61

Query: 63  ARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEYLD 122
           ARAYD+AAY+MRG  AILNFP+EY + S        +GSSS+S+S S    +V EFEYLD
Sbjct: 62  ARAYDQAAYSMRGQAAILNFPHEYNMGSGVSSSTAMAGSSSASASASSSSRQVFEFEYLD 121

Query: 123 DKVLEDLLDYGEESDK 139
           D VLE+LL+ GE+ +K
Sbjct: 122 DSVLEELLEEGEKPNK 127

[Close]

BLAST of Lsi05G017230 vs. ExPASy Swiss-Prot
Match: Q9LND1 (Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 GN=ERF094 PE=2 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.2e-20
Identity = 46/71 (64.79%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 13  EDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYN 72
           +++T A    E  YRGVR+RPWGKFAAEIRDS R+G+R+WLGTF+TAE AA AYD+AA+ 
Sbjct: 69  KEATVAAEEEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFA 128

Query: 73  MRGHLAILNFP 84
           ++G LA+LNFP
Sbjct: 129 LKGSLAVLNFP 139

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BLAST of Lsi05G017230 vs. ExPASy TrEMBL
Match: A0A5A7U6W8 (Ethylene-responsive transcription factor ERF096 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001520 PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62
Identity = 129/140 (92.14%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRG+ +D   AGG REIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE
Sbjct: 1   MDESGGRGRGHGDD--LAGGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGG Y S  SSSSSSMSMRQNEVIEFEY
Sbjct: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGAYYSSGSSSSSSMSMRQNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLDYGEESDKRS
Sbjct: 121 LDDKVLEDLLDYGEESDKRS 138

[Close]

BLAST of Lsi05G017230 vs. ExPASy TrEMBL
Match: A0A1S3AW98 (ethylene-responsive transcription factor ERF096 OS=Cucumis melo OX=3656 GN=LOC103483602 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 4.2e-61
Identity = 128/140 (91.43%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRG+ +D   AGG REI YRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE
Sbjct: 1   MDESGGRGRGHGDD--LAGGSREICYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGG Y S  SSSSSSMSMRQNEVIEFEY
Sbjct: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGAYYSSGSSSSSSMSMRQNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLDYGEESDKRS
Sbjct: 121 LDDKVLEDLLDYGEESDKRS 138

[Close]

BLAST of Lsi05G017230 vs. ExPASy TrEMBL
Match: A0A6J1IV86 (ethylene-responsive transcription factor ERF096 OS=Cucurbita maxima OX=3661 GN=LOC111479589 PE=4 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 6.1e-60
Identity = 125/140 (89.29%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRGYAEDS+TAGG REIRYRGVRRRPWGKFAAEIRDSRRQG+R+WLGTFNTAE
Sbjct: 1   MDESGGRGRGYAEDSSTAGGSREIRYRGVRRRPWGKFAAEIRDSRRQGIRMWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAY+MRGHLAILNFPNEYPLTS G GGG S  SS  SSSMSMR NEVIEFEY
Sbjct: 61  EAARAYDRAAYSMRGHLAILNFPNEYPLTSGGTGGGVS--SSGGSSSMSMRPNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLD GEESDK+S
Sbjct: 121 LDDKVLEDLLDCGEESDKKS 138

[Close]

BLAST of Lsi05G017230 vs. ExPASy TrEMBL
Match: A0A6J1E9T0 (ethylene-responsive transcription factor ERF096-like OS=Cucurbita moschata OX=3662 GN=LOC111432142 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 1.0e-59
Identity = 124/140 (88.57%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRGYAED +TAGG REIRYRGVRRRPWGKFAAEIRDSRRQG+R+WLGTFNTAE
Sbjct: 1   MDESGGRGRGYAEDLSTAGGSREIRYRGVRRRPWGKFAAEIRDSRRQGIRMWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAY+MRGHLAILNFPNEYPLTS+G GGG S  SSS SSSMSMR NEVIEFEY
Sbjct: 61  EAARAYDRAAYSMRGHLAILNFPNEYPLTSAGAGGGVS--SSSGSSSMSMRPNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLD GEESDK++
Sbjct: 121 LDDKVLEDLLDCGEESDKKT 138

[Close]

BLAST of Lsi05G017230 vs. ExPASy TrEMBL
Match: A0A0A0L9V5 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135630 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 5.2e-59
Identity = 128/140 (91.43%), Postives = 129/140 (92.14%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRGY +DST   G REIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE
Sbjct: 1   MDESGGRGRGYGDDST---GSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAYNMRGHLAILNFPNEYPLT    GG YSSG SSSSSSMSMRQNEVIEFEY
Sbjct: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTR---GGAYSSG-SSSSSSMSMRQNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLDYGEESDKRS
Sbjct: 121 LDDKVLEDLLDYGEESDKRS 133

[Close]

BLAST of Lsi05G017230 vs. NCBI nr
Match: XP_038877364.1 (ethylene-responsive transcription factor ERF096 [Benincasa hispida])

HSP 1 Score: 263.8 bits (673), Expect = 8.2e-67
Identity = 138/142 (97.18%), Postives = 138/142 (97.18%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRGYAEDSTTAGG REIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE
Sbjct: 1   MDESGGRGRGYAEDSTTAGGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGG---YSSGSSSSSSSMSMRQNEVIE 120
           EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGG   YSSGSSSSSSSMSMRQNEVIE
Sbjct: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGGGRYSSGSSSSSSSMSMRQNEVIE 120

Query: 121 FEYLDDKVLEDLLDYGEESDKR 140
           FEYLDDKVLEDLLDYGEESDKR
Sbjct: 121 FEYLDDKVLEDLLDYGEESDKR 142

[Close]

BLAST of Lsi05G017230 vs. NCBI nr
Match: KAA0049259.1 (ethylene-responsive transcription factor ERF096 [Cucumis melo var. makuwa] >TYK17298.1 ethylene-responsive transcription factor ERF096 [Cucumis melo var. makuwa])

HSP 1 Score: 246.9 bits (629), Expect = 1.0e-61
Identity = 129/140 (92.14%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRG+ +D   AGG REIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE
Sbjct: 1   MDESGGRGRGHGDD--LAGGSREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGG Y S  SSSSSSMSMRQNEVIEFEY
Sbjct: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGAYYSSGSSSSSSMSMRQNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLDYGEESDKRS
Sbjct: 121 LDDKVLEDLLDYGEESDKRS 138

[Close]

BLAST of Lsi05G017230 vs. NCBI nr
Match: XP_008438537.1 (PREDICTED: ethylene-responsive transcription factor ERF096 [Cucumis melo])

HSP 1 Score: 243.8 bits (621), Expect = 8.7e-61
Identity = 128/140 (91.43%), Postives = 130/140 (92.86%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRG+ +D   AGG REI YRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE
Sbjct: 1   MDESGGRGRGHGDD--LAGGSREICYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGG Y S  SSSSSSMSMRQNEVIEFEY
Sbjct: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGAYYSSGSSSSSSMSMRQNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLDYGEESDKRS
Sbjct: 121 LDDKVLEDLLDYGEESDKRS 138

[Close]

BLAST of Lsi05G017230 vs. NCBI nr
Match: XP_023529041.1 (ethylene-responsive transcription factor ERF096-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 240.4 bits (612), Expect = 9.7e-60
Identity = 123/140 (87.86%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRGYAEDS+TAGG REIRYRGVRRRPWGKFAAEIRDSRRQG+R+WLGTFNTAE
Sbjct: 1   MDESGGRGRGYAEDSSTAGGSREIRYRGVRRRPWGKFAAEIRDSRRQGIRMWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAY+MRGHLAILNFPNEYPLT++ GGGG+S  SS  SSSMSMR NEVIEFEY
Sbjct: 61  EAARAYDRAAYSMRGHLAILNFPNEYPLTTAAGGGGFS--SSGGSSSMSMRPNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLD GEESDK++
Sbjct: 121 LDDKVLEDLLDCGEESDKKT 138

[Close]

BLAST of Lsi05G017230 vs. NCBI nr
Match: KAG6582379.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.0 bits (611), Expect = 1.3e-59
Identity = 124/140 (88.57%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 1   MDESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAE 60
           MDESGGRGRGY EDS+TAGG REIRYRGVRRRPWGKFAAEIRDSRRQG+R+WLGTFNTAE
Sbjct: 1   MDESGGRGRGYGEDSSTAGGSREIRYRGVRRRPWGKFAAEIRDSRRQGIRMWLGTFNTAE 60

Query: 61  EAARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEY 120
           EAARAYDRAAY+MRGHLAILNFPNEYPLTS+G GGG S  SSS SSSMSMR NEVIEFEY
Sbjct: 61  EAARAYDRAAYSMRGHLAILNFPNEYPLTSAGAGGGVS--SSSGSSSMSMRPNEVIEFEY 120

Query: 121 LDDKVLEDLLDYGEESDKRS 141
           LDDKVLEDLLD GEESDK++
Sbjct: 121 LDDKVLEDLLDCGEESDKKT 138

[Close]

BLAST of Lsi05G017230 vs. TAIR 10
Match: AT3G23220.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 145.6 bits (366), Expect = 3.0e-35
Identity = 75/121 (61.98%), Postives = 91/121 (75.21%), Query Frame = 0


Query: 23  EIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILNF 82
           E++YRGVR+RPWGK+AAEIRDS R G R+WLGTFNTAE+AARAYDRAA+ MRG  AILNF
Sbjct: 11  EMKYRGVRKRPWGKYAAEIRDSARHGARVWLGTFNTAEDAARAYDRAAFGMRGQRAILNF 70

Query: 83  PNEYPLTSSGGGGGYSSGSSSSSSSM-----SMRQNEVIEFEYLDDKVLEDLLDYGEESD 139
           P+EY +   G  G + +  +SSSS            EVIEFEYLDD +LE+LLDYGE S+
Sbjct: 71  PHEYQMMKDGPNGSHENAVASSSSGYRGGGGGDDGREVIEFEYLDDSLLEELLDYGERSN 130

[Close]

BLAST of Lsi05G017230 vs. TAIR 10
Match: AT1G04370.1 (Ethylene-responsive element binding factor 14 )

HSP 1 Score: 144.4 bits (363), Expect = 6.7e-35
Identity = 77/136 (56.62%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 3   ESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEA 62
           + GGR  G     +  GG  + +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAE+A
Sbjct: 2   DQGGRSSG-----SGGGGAEQGKYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEDA 61

Query: 63  ARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEYLD 122
           ARAYDRAAY+MRG  AILNFP+EY +          +GSSS++++ S    +V EFEYLD
Sbjct: 62  ARAYDRAAYSMRGKAAILNFPHEYNM---------GTGSSSTAANSSSSSQQVFEFEYLD 121

Query: 123 DKVLEDLLDYGEESDK 139
           D VL++LL+YGE  +K
Sbjct: 122 DSVLDELLEYGENYNK 123

[Close]

BLAST of Lsi05G017230 vs. TAIR 10
Match: AT3G23230.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 144.4 bits (363), Expect = 6.7e-35
Identity = 82/126 (65.08%), Postives = 91/126 (72.22%), Query Frame = 0


Query: 22  REIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYNMRGHLAILN 81
           ++ R+RGVRRRPWGKFAAEIRD  R G R+WLGTF TAEEAARAYDRAA+N+RGHLAILN
Sbjct: 16  KQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILN 75

Query: 82  FPNEY-----------PLTSSGGGGGYSSGSSSSSSSMSMRQN--EVIEFEYLDDKVLED 135
           FPNEY           P  SS      SS SS S+S+   RQN  EV EFEYLDDKVLE+
Sbjct: 76  FPNEYYPRMDDYSLRPPYASSS-----SSSSSGSTSTNVSRQNQREVFEFEYLDDKVLEE 135

[Close]

BLAST of Lsi05G017230 vs. TAIR 10
Match: AT5G43410.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 8.8e-35
Identity = 81/136 (59.56%), Postives = 99/136 (72.79%), Query Frame = 0


Query: 3   ESGGRGRGYAEDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEA 62
           + GGRG G AE           +YRGVRRRPWGK+AAEIRDSR+ G R+WLGTF+TAEEA
Sbjct: 2   DQGGRGVG-AEHG---------KYRGVRRRPWGKYAAEIRDSRKHGERVWLGTFDTAEEA 61

Query: 63  ARAYDRAAYNMRGHLAILNFPNEYPLTSSGGGGGYSSGSSSSSSSMSMRQNEVIEFEYLD 122
           ARAYD+AAY+MRG  AILNFP+EY + S        +GSSS+S+S S    +V EFEYLD
Sbjct: 62  ARAYDQAAYSMRGQAAILNFPHEYNMGSGVSSSTAMAGSSSASASASSSSRQVFEFEYLD 121

Query: 123 DKVLEDLLDYGEESDK 139
           D VLE+LL+ GE+ +K
Sbjct: 122 DSVLEELLEEGEKPNK 127

[Close]

BLAST of Lsi05G017230 vs. TAIR 10
Match: AT1G06160.1 (octadecanoid-responsive Arabidopsis AP2/ERF 59 )

HSP 1 Score: 100.9 bits (250), Expect = 8.5e-22
Identity = 46/71 (64.79%), Postives = 59/71 (83.10%), Query Frame = 0


Query: 13  EDSTTAGGGREIRYRGVRRRPWGKFAAEIRDSRRQGVRIWLGTFNTAEEAARAYDRAAYN 72
           +++T A    E  YRGVR+RPWGKFAAEIRDS R+G+R+WLGTF+TAE AA AYD+AA+ 
Sbjct: 69  KEATVAAEEEEKSYRGVRKRPWGKFAAEIRDSTRKGIRVWLGTFDTAEAAALAYDQAAFA 128

Query: 73  MRGHLAILNFP 84
           ++G LA+LNFP
Sbjct: 129 LKGSLAVLNFP 139

The following BLAST results are available for this feature:

BLAST of Lsi05G017230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LTC6	4.2e-34	61.98	Ethylene-responsive transcription factor ERF095 OS=Arabidopsis thaliana OX=3702 ...	[more]
P93822	9.5e-34	56.62	Ethylene-responsive transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=E...	[more]
Q9LTC5	9.5e-34	65.08	Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LSX0	1.2e-33	59.56	Ethylene-responsive transcription factor ERF096 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9LND1	1.2e-20	64.79	Ethylene-responsive transcription factor ERF094 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lsi05G017230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U6W8	5.0e-62	92.14	Ethylene-responsive transcription factor ERF096 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A1S3AW98	4.2e-61	91.43	ethylene-responsive transcription factor ERF096 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1IV86	6.1e-60	89.29	ethylene-responsive transcription factor ERF096 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1E9T0	1.0e-59	88.57	ethylene-responsive transcription factor ERF096-like OS=Cucurbita moschata OX=36...	[more]
A0A0A0L9V5	5.2e-59	91.43	AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G135630 PE=...	[more]

BLAST of Lsi05G017230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877364.1	8.2e-67	97.18	ethylene-responsive transcription factor ERF096 [Benincasa hispida]	[more]
KAA0049259.1	1.0e-61	92.14	ethylene-responsive transcription factor ERF096 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_008438537.1	8.7e-61	91.43	PREDICTED: ethylene-responsive transcription factor ERF096 [Cucumis melo]	[more]
XP_023529041.1	9.7e-60	87.86	ethylene-responsive transcription factor ERF096-like [Cucurbita pepo subsp. pepo...	[more]
KAG6582379.1	1.3e-59	88.57	Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp....	[more]

BLAST of Lsi05G017230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23220.1	3.0e-35	61.98	Integrase-type DNA-binding superfamily protein	[more]
AT1G04370.1	6.7e-35	56.62	Ethylene-responsive element binding factor 14	[more]
AT3G23230.1	6.7e-35	65.08	Integrase-type DNA-binding superfamily protein	[more]
AT5G43410.1	8.8e-35	59.56	Integrase-type DNA-binding superfamily protein	[more]
AT1G06160.1	8.5e-22	64.79	octadecanoid-responsive Arabidopsis AP2/ERF 59	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 49..65 score: 71.87 coord: 26..37 score: 72.73
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 25..89 e-value: 7.3E-34 score: 128.5
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 25..76 e-value: 6.3E-16 score: 58.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 25..83 score: 23.538157
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 25..84 e-value: 3.50749E-18 score: 71.1487
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 24..84 e-value: 1.4E-27 score: 97.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..110
None	No IPR available	PANTHER	PTHR31190:SF303	ETHYLENE RESPONSE FACTOR	coord: 20..134
IPR044808	Ethylene-responsive transcription factor	PANTHER	PTHR31190	DNA-BINDING DOMAIN	coord: 20..134
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 25..84

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G017230.1	Lsi05G017230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009873	ethylene-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity