Lsi05G017180 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G017180
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	CASP-like protein
Location	chr05: 24644599 .. 24646411 (+)
RNA-Seq Expression	Lsi05G017180
Synteny	Lsi05G017180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTTTGTGAACTGTGATGGCATTTCCATTTGTTTAATTGAAAGTCAATTCACGACTTTTAAACTGTTATACGTAACCATGCATATGCAAAGCGCTTTCCCTTTCTTCCTCTCCAATCCCCCTTTTTGTTCATTCAATCCAAACAACGCCAGACGCTGTTCATCAGCTTTTTCCAAGACCATTTCTGGGTTCTGGGTTCCGTTAATCCCCCATCAATTTCTTTGTAATTTCAAAATCTATTCGATTTCCCAATTTGGGTTTTTGATTTCGGATTCCGATTTTTCGTTTTAGCTTTTTGGGTACCCTGATTTTCTCGATTGCTATCTGGTCAAAGCTTTGATCGTGTCTAGAGAGTTATGAGAAAATGGGTAATAAACCCAATTGGAATTTGAGATTTGGAGGTTTATGCTGAGTCTTGGGAAGGAAGAAGATGAAGGATTTTCCTGGGACTCCTGGGACTGCGACGGGGCTAATTCTGAGGATTTTGCAGTGTGTTTTTGCTGCTGCCTCTATTGCTTCTATGGCTTCAACTTCTTACTTCTTCAAATTCACAGCTTTTTGGTATGTGTTCTTTACCCCCTTTTCAGTTCCTCTGTTTGACTTGAATACAATCTGATGATTCTCTGTCTGAACATCCATTTTTTTCTGCTTACTTTCCTTGCTCAGGGATAAGATCATAAGTATATGGCATCTAAGTTGTTTGGTTTTAGTCTTATGATCAATCCTGAACCATTGCTTGTGAGAGAGCAATCTGATTGTTTATTGTTTGTATTGTCTAAAAGGTCAAACTATAGCAAACTTTGTTTCATGTATATTCTTCATGGTACCTTACCAATTCTAAGAGCAAATATCAAAGGATGGTATTTCAGCCTAAGCTAAATCATTGTTTTTTTCTTTTTCTCTGCCACAGCTACTGAATAATGACCATTTTTCAGCAATTTAGATTATCAAAGTTCAAGATTTGTTCTTCCTGTTTTGTAATTCTGTTGATTGCTGACAATGACCAAAAATATCCATCTCCATATCATTGAAAATCAATCTGCAAAAATGTAGATTAGATTAGAGCATGTGTAGTTCATCTTGTTTGCAATGTTCTTGTAATAACTATAGAGTTGGAAGCACTAATTCAAACTTGTTTGATGTGTTCTTATCATATATCCTTTGTGCAGCTACCTGATTGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGTTAGCATTAATCGACGCCTATGCGCTGGTGAGAAACAAATCCCTACAGAGCACTGTGCTGATTAGCCTCTTCGTCGTCGGGGATTGGGTAAGTCTCCATAGAAATTTGTAACCATCTTCATTTTTGTATAGTGGTTGGTCTAAGAGGATTGTAAGTTTGATGTATTGATGTTGGATTGCAGATTACAGCAACATTGACACTCGCAGCAGCTTCTTCTTCAAGTGGGGTAGCAATATTGTATTTTAATGACTTGAAAAGCTGTAGTTTTATAGGGGAATGCCAAAAATACCAACTCTCAGTGGCCTTGGCATTCCTCAGCTGGATAACTATTGCTACTTCTTCTCTTATTATGGTTTGGCTATTGGCTTCCAGTTAAAACCATTTGTTGTACAGGCAATTTCAAATGTTGCTATTTTTTTTGTTTTTCTTTCAGCTCACCTTTTCTTCTTTTCATTTGCTCTGTAATTTGTGTTTTCTCATCTCTTCATACGTAGTTTGAAAGCACAAGTCCGTTAGTTTCTTTAGTGGGGATGTAAATTTGATCATAACAAACTATTCGATTTTTTTTTTTTTATCCATTCCAATTTTCAAACTTTCC

mRNA sequence

GACTTTGTGAACTGTGATGGCATTTCCATTTGTTTAATTGAAAGTCAATTCACGACTTTTAAACTGTTATACGTAACCATGCATATGCAAAGCGCTTTCCCTTTCTTCCTCTCCAATCCCCCTTTTTGTTCATTCAATCCAAACAACGCCAGACGCTGTTCATCAGCTTTTTCCAAGACCATTTCTGGGTTCTGGGTTCCGTTAATCCCCCATCAATTTCTTTGTAATTTCAAAATCTATTCGATTTCCCAATTTGGGTTTTTGATTTCGGATTCCGATTTTTCGTTTTAGCTTTTTGGGTACCCTGATTTTCTCGATTGCTATCTGGTCAAAGCTTTGATCGTGTCTAGAGAGTTATGAGAAAATGGGTAATAAACCCAATTGGAATTTGAGATTTGGAGGTTTATGCTGAGTCTTGGGAAGGAAGAAGATGAAGGATTTTCCTGGGACTCCTGGGACTGCGACGGGGCTAATTCTGAGGATTTTGCAGTGTGTTTTTGCTGCTGCCTCTATTGCTTCTATGGCTTCAACTTCTTACTTCTTCAAATTCACAGCTTTTTGCTACCTGATTGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGTTAGCATTAATCGACGCCTATGCGCTGGTGAGAAACAAATCCCTACAGAGCACTGTGCTGATTAGCCTCTTCGTCGTCGGGGATTGGATTACAGCAACATTGACACTCGCAGCAGCTTCTTCTTCAAGTGGGGTAGCAATATTGTATTTTAATGACTTGAAAAGCTGTAGTTTTATAGGGGAATGCCAAAAATACCAACTCTCAGTGGCCTTGGCATTCCTCAGCTGGATAACTATTGCTACTTCTTCTCTTATTATGGTTTGGCTATTGGCTTCCAGTTAAAACCATTTGTTGTACAGGCAATTTCAAATGTTGCTATTTTTTTTGTTTTTCTTTCAGCTCACCTTTTCTTCTTTTCATTTGCTCTGTAATTTGTGTTTTCTCATCTCTTCATACGTAGTTTGAAAGCACAAGTCCGTTAGTTTCTTTAGTGGGGATGTAAATTTGATCATAACAAACTATTCGATTTTTTTTTTTTTATCCATTCCAATTTTCAAACTTTCC

Coding sequence (CDS)

ATGAAGGATTTTCCTGGGACTCCTGGGACTGCGACGGGGCTAATTCTGAGGATTTTGCAGTGTGTTTTTGCTGCTGCCTCTATTGCTTCTATGGCTTCAACTTCTTACTTCTTCAAATTCACAGCTTTTTGCTACCTGATTGCTTCATTGGGGTTGCAAATCACCTGGAGTTTTGTGTTAGCATTAATCGACGCCTATGCGCTGGTGAGAAACAAATCCCTACAGAGCACTGTGCTGATTAGCCTCTTCGTCGTCGGGGATTGGATTACAGCAACATTGACACTCGCAGCAGCTTCTTCTTCAAGTGGGGTAGCAATATTGTATTTTAATGACTTGAAAAGCTGTAGTTTTATAGGGGAATGCCAAAAATACCAACTCTCAGTGGCCTTGGCATTCCTCAGCTGGATAACTATTGCTACTTCTTCTCTTATTATGGTTTGGCTATTGGCTTCCAGTTAA

Protein sequence

MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVLALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGECQKYQLSVALAFLSWITIATSSLIMVWLLASS

Homology

[Close]

BLAST of Lsi05G017180 vs. ExPASy Swiss-Prot
Match: Q8L7R5 (CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 4.2e-51
Identity = 105/152 (69.08%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           M D PGTPGT TGL+LRI QCVFAA SI+ M ++  FF FTAFCYLIA++GLQ+ WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A++D +ALVR K+L S VL+SLFVVGDW+T+TL+LA ASSS+G+ +LYF DL SCSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           C KYQLSVALAFL WITIA SSL  +WLLAS+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLASA 152

[Close]

BLAST of Lsi05G017180 vs. ExPASy Swiss-Prot
Match: P0DI71 (CASP-like protein 5B1 OS=Ginkgo biloba OX=3311 GN=gba_locus_13664 PE=3 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37
Identity = 83/151 (54.97%), Postives = 112/151 (74.17%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MK+ PG PGT  GL LR+ Q +FAAA+I  M +   F  +TAFCYL+A++ LQ  WSF+L
Sbjct: 28  MKELPGMPGTIGGLALRVGQFLFAAAAIVIMVTGDEFTNYTAFCYLVAAMSLQFLWSFML 87

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A++D YAL+  + L+++VL+SLFVVGDW+TATL+LAAA S++GV +L+ NDL  C  +  
Sbjct: 88  AILDTYALLIKRGLRNSVLLSLFVVGDWVTATLSLAAACSTAGVTVLFDNDLNYCGQM-H 147

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLAS 152
           C +YQLS A+AFLSW+ I  SSL+  WL AS
Sbjct: 148 CHRYQLSAAMAFLSWLLIGMSSLLTFWLWAS 177

[Close]

BLAST of Lsi05G017180 vs. ExPASy Swiss-Prot
Match: D5ACW4 (CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2)

HSP 1 Score: 156.8 bits (395), Expect = 2.0e-37
Identity = 84/151 (55.63%), Postives = 110/151 (72.85%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKD PGTPGT  GL LR+ Q +FAAAS+  M ++  F  FTAFCYL A++ LQ  WSFVL
Sbjct: 32  MKDLPGTPGTVGGLALRMGQFIFAAASVVIMVTSDEFINFTAFCYLAAAMALQFLWSFVL 91

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A ID YAL+  + L +++L+SLFVVGDW+TATL+LAAA S++G+ +L+  DL  C  +  
Sbjct: 92  ATIDVYALLIKRGLPNSILLSLFVVGDWVTATLSLAAACSTAGITVLFDKDLNYCDQM-H 151

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLAS 152
           C++YQLS  +AF SW+ IA SSLI + LL S
Sbjct: 152 CRRYQLSATMAFFSWVLIAISSLITLLLLVS 181

[Close]

BLAST of Lsi05G017180 vs. ExPASy Swiss-Prot
Match: B8BD96 (CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.6e-37
Identity = 85/153 (55.56%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKD  G+PGT +G+ LR+ QCVFA AS+ +MAS   F  +TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A +D Y+L   + L + VL+SLFVVGDW+TA L+ AAAS+S+GV IL+  D+  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CQKYQLSVALAFLSWITIATSSLIMVWLLAS 152
             C +Y+LSV LAF++W  IATS++ M WLLAS
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of Lsi05G017180 vs. ExPASy Swiss-Prot
Match: Q6K478 (CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.6e-37
Identity = 85/153 (55.56%), Postives = 112/153 (73.20%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKD  G+PGT +G+ LR+ QCVFA AS+ +MAS   F  +TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKDVVGSPGTWSGMSLRVSQCVFAGASVVAMASAYGFSNYTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A +D Y+L   + L + VL+SLFVVGDW+TA L+ AAAS+S+GV IL+  D+  C    +
Sbjct: 61  ACLDIYSLQTKRDLHNPVLVSLFVVGDWVTAILSFAAASASAGVTILFERDVHFCRMYPQ 120

Query: 121 --CQKYQLSVALAFLSWITIATSSLIMVWLLAS 152
             C +Y+LSV LAF++W  IATS++ M WLLAS
Sbjct: 121 LSCGRYELSVILAFITWSFIATSAVSMFWLLAS 153

[Close]

BLAST of Lsi05G017180 vs. ExPASy TrEMBL
Match: A0A1S3AXA2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483607 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 5.4e-70
Identity = 145/152 (95.39%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGTA GLILR+LQCVFAAASIASMAST+YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           ALIDAYALVRNK+LQSTVL+SLFVVGDWITATLTLAAASSSSGVAILYFNDLKSC+FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSWITIATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Lsi05G017180 vs. ExPASy TrEMBL
Match: A0A0A0L4F6 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G135670 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.1e-70
Identity = 144/152 (94.74%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT TGLILRILQCVFAAAS+ASMAST+YFFKFTAFCYLIASLGLQITWSF+L
Sbjct: 1   MKDFPGTPGTVTGLILRILQCVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFML 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           ALIDAYALVRNK+LQSTVL+SLFVVGDWITATLTLAAASSSSGVAILYFNDLKSC+FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSWITIATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Lsi05G017180 vs. ExPASy TrEMBL
Match: A0A5D3D223 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001480 PE=3 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 2.1e-69
Identity = 144/152 (94.74%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGTA GLILR+LQCVFAAASIASMAST+YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           ALIDAYALVRNK+LQSTVL+SLFVVGDWITATLTLAAASSSSGVAILYFNDLKSC+FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSWI IATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWIAIATSSLIMVWILASS 152

[Close]

BLAST of Lsi05G017180 vs. ExPASy TrEMBL
Match: A0A6J1D351 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111016562 PE=3 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.3e-67
Identity = 139/152 (91.45%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT TGLILRILQCVFAA SIASMASTSYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTKTGLILRILQCVFAAGSIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A+ID YALVRNK LQS +LISLFVVGDWITATLTLAAAS+SSG+AILYFNDL+ C+FIGE
Sbjct: 61  AIIDGYALVRNKVLQSPILISLFVVGDWITATLTLAAASASSGIAILYFNDLEGCNFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSW+TIATSSLIMVWLLASS
Sbjct: 121 CQKYQLSVALAFLSWVTIATSSLIMVWLLASS 152

[Close]

BLAST of Lsi05G017180 vs. ExPASy TrEMBL
Match: A0A6J1E906 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431763 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 1.2e-64
Identity = 136/152 (89.47%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           M+DFPG+PGT  GLILRILQ VFAAAS+ASMAST+YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 25  MRDFPGSPGTVMGLILRILQFVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFVL 84

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           ALIDAYALV+NK+LQ+++LISLFVVGDWITATLTLAAASSSSGVAILYFNDL  C FIGE
Sbjct: 85  ALIDAYALVKNKALQNSLLISLFVVGDWITATLTLAAASSSSGVAILYFNDLDICGFIGE 144

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSWIT+ATSSLIMVWLLASS
Sbjct: 145 CQKYQLSVALAFLSWITVATSSLIMVWLLASS 176

[Close]

BLAST of Lsi05G017180 vs. NCBI nr
Match: XP_038877372.1 (CASP-like protein 5B3 [Benincasa hispida])

HSP 1 Score: 276.2 bits (705), Expect = 1.7e-70
Identity = 149/152 (98.03%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT TGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTMTGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           ALIDAYALVRNK+LQSTVLISLFV GDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLISLFVAGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSWITIATSSLIMVWLLASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 152

[Close]

BLAST of Lsi05G017180 vs. NCBI nr
Match: XP_008438541.1 (PREDICTED: CASP-like protein 5B3 [Cucumis melo])

HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69
Identity = 145/152 (95.39%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGTA GLILR+LQCVFAAASIASMAST+YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           ALIDAYALVRNK+LQSTVL+SLFVVGDWITATLTLAAASSSSGVAILYFNDLKSC+FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSWITIATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Lsi05G017180 vs. NCBI nr
Match: XP_004134071.1 (CASP-like protein 5B3 [Cucumis sativus] >KGN56870.1 hypothetical protein Csa_011136 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69
Identity = 144/152 (94.74%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT TGLILRILQCVFAAAS+ASMAST+YFFKFTAFCYLIASLGLQITWSF+L
Sbjct: 1   MKDFPGTPGTVTGLILRILQCVFAAASVASMASTAYFFKFTAFCYLIASLGLQITWSFML 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           ALIDAYALVRNK+LQSTVL+SLFVVGDWITATLTLAAASSSSGVAILYFNDLKSC+FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSWITIATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWITIATSSLIMVWILASS 152

[Close]

BLAST of Lsi05G017180 vs. NCBI nr
Match: KAA0049263.1 (CASP-like protein 5B3 [Cucumis melo var. makuwa] >TYK17294.1 CASP-like protein 5B3 [Cucumis melo var. makuwa])

HSP 1 Score: 271.6 bits (693), Expect = 4.2e-69
Identity = 144/152 (94.74%), Postives = 150/152 (98.68%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGTA GLILR+LQCVFAAASIASMAST+YFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTAMGLILRVLQCVFAAASIASMASTAYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           ALIDAYALVRNK+LQSTVL+SLFVVGDWITATLTLAAASSSSGVAILYFNDLKSC+FIGE
Sbjct: 61  ALIDAYALVRNKALQSTVLVSLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCNFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSWI IATSSLIMVW+LASS
Sbjct: 121 CQKYQLSVALAFLSWIAIATSSLIMVWILASS 152

[Close]

BLAST of Lsi05G017180 vs. NCBI nr
Match: XP_022147696.1 (CASP-like protein 5B3 [Momordica charantia])

HSP 1 Score: 263.8 bits (673), Expect = 8.9e-67
Identity = 139/152 (91.45%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKDFPGTPGT TGLILRILQCVFAA SIASMASTSYFFKFTAFCYLIASLGLQITWSFVL
Sbjct: 1   MKDFPGTPGTKTGLILRILQCVFAAGSIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A+ID YALVRNK LQS +LISLFVVGDWITATLTLAAAS+SSG+AILYFNDL+ C+FIGE
Sbjct: 61  AIIDGYALVRNKVLQSPILISLFVVGDWITATLTLAAASASSGIAILYFNDLEGCNFIGE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           CQKYQLSVALAFLSW+TIATSSLIMVWLLASS
Sbjct: 121 CQKYQLSVALAFLSWVTIATSSLIMVWLLASS 152

[Close]

BLAST of Lsi05G017180 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 202.2 bits (513), Expect = 2.9e-52
Identity = 105/152 (69.08%), Postives = 125/152 (82.24%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           M D PGTPGT TGL+LRI QCVFAA SI+ M ++  FF FTAFCYLIA++GLQ+ WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A++D +ALVR K+L S VL+SLFVVGDW+T+TL+LA ASSS+G+ +LYF DL SCSF  E
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLASS 153
           C KYQLSVALAFL WITIA SSL  +WLLAS+
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLASA 152

[Close]

BLAST of Lsi05G017180 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 153.7 bits (387), Expect = 1.2e-37
Identity = 86/153 (56.21%), Postives = 109/153 (71.24%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MK   G PGT  GL+LRI QC  AAASI  M S   F   TAFCYLIAS+GLQ+ WSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A +D YAL   K LQ+ +L+SLFVVGDW+TA L+LAAA SS+GV +LY  D+K C+   +
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 121 --CQKYQLSVALAFLSWITIATSSLIMVWLLAS 152
             C +Y+++VAL+F++WI IA SS +  W+LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Lsi05G017180 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 139.4 bits (350), Expect = 2.3e-33
Identity = 77/151 (50.99%), Postives = 102/151 (67.55%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MK   G+PGT +GLILR+ QC  AAASI  M S+  F  +TAFC+L+AS+GLQ+ WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSC--SFI 120
           A +D YA+ R   L+S +L+SLF VGDW+TA L LAAA SS+GV +L+  D + C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 121 GECQKYQLSVALAFLSWITIATSSLIMVWLL 150
             C ++Q+SV L+F +W   A SS  M W+L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

[Close]

BLAST of Lsi05G017180 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 135.2 bits (339), Expect = 4.4e-32
Identity = 76/151 (50.33%), Postives = 100/151 (66.23%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           M D  G PGT  GL LR  Q +FAAA++  MASTS F   TAFCYL+A+ GLQ  WS  L
Sbjct: 29  MDDMEGMPGTLLGLALRFFQFLFAAAALCVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 88

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
           A++D YA++  +SLQ+  L+SLF +GD +T+TLT AAA +S+G+ +L  NDL SC+    
Sbjct: 89  AMVDVYAIMVKRSLQNRRLVSLFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCA-QNH 148

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLAS 152
           C +++ S ALAF+SW     S L   W LAS
Sbjct: 149 CVQFETSTALAFISWFAALPSFLFNFWSLAS 178

[Close]

BLAST of Lsi05G017180 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 117.1 bits (292), Expect = 1.2e-26
Identity = 66/151 (43.71%), Postives = 100/151 (66.23%), Query Frame = 0


Query: 1   MKDFPGTPGTATGLILRILQCVFAAASIASMASTSYFFKFTAFCYLIASLGLQITWSFVL 60
           MKD  G PGT  GLILR+ Q V A  S++ M +TS F   TAFC L+ ++ LQ  WS  L
Sbjct: 31  MKDVQGMPGTTGGLILRLSQFVPALISVSVMVTTSDFRSATAFCCLVLAVSLQSLWSLSL 90

Query: 61  ALIDAYALVRNKSLQSTVLISLFVVGDWITATLTLAAASSSSGVAILYFNDLKSCSFIGE 120
            +IDAYAL+  +SL++  ++  F +GD +T+TLT AAAS+S+G+ +L  NDL  C+ +  
Sbjct: 91  FIIDAYALLVRRSLRNHSVVQCFTIGDGVTSTLTFAAASASAGITVL-INDLGQCN-VNH 150

Query: 121 CQKYQLSVALAFLSWITIATSSLIMVWLLAS 152
           C +++ + A+AF+SW  ++ S ++  W LA+
Sbjct: 151 CTRFETATAMAFISWFAVSPSFILNFWSLAT 179

The following BLAST results are available for this feature:

BLAST of Lsi05G017180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7R5	4.2e-51	69.08	CASP-like protein 5B3 OS=Arabidopsis thaliana OX=3702 GN=At3g23200 PE=2 SV=1	[more]
P0DI71	2.0e-37	54.97	CASP-like protein 5B1 OS=Ginkgo biloba OX=3311 GN=gba_locus_13664 PE=3 SV=1	[more]
D5ACW4	2.0e-37	55.63	CASP-like protein 5B1 (Fragment) OS=Picea sitchensis OX=3332 PE=2 SV=2	[more]
B8BD96	2.6e-37	55.56	CASP-like protein 5B3 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_30532 PE=3 S...	[more]
Q6K478	2.6e-37	55.56	CASP-like protein 5B3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0249400 P...	[more]

BLAST of Lsi05G017180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AXA2	5.4e-70	95.39	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103483607 PE=3 SV=1	[more]
A0A0A0L4F6	7.1e-70	94.74	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_3G135670 PE=3 SV=1	[more]
A0A5D3D223	2.1e-69	94.74	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00...	[more]
A0A6J1D351	4.3e-67	91.45	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111016562 PE=3 SV=1	[more]
A0A6J1E906	1.2e-64	89.47	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111431763 PE=3 SV=1	[more]

BLAST of Lsi05G017180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877372.1	1.7e-70	98.03	CASP-like protein 5B3 [Benincasa hispida]	[more]
XP_008438541.1	1.1e-69	95.39	PREDICTED: CASP-like protein 5B3 [Cucumis melo]	[more]
XP_004134071.1	1.5e-69	94.74	CASP-like protein 5B3 [Cucumis sativus] >KGN56870.1 hypothetical protein Csa_011...	[more]
KAA0049263.1	4.2e-69	94.74	CASP-like protein 5B3 [Cucumis melo var. makuwa] >TYK17294.1 CASP-like protein 5...	[more]
XP_022147696.1	8.9e-67	91.45	CASP-like protein 5B3 [Momordica charantia]	[more]

BLAST of Lsi05G017180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23200.1	2.9e-52	69.08	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	1.2e-37	56.21	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	2.3e-33	50.99	Uncharacterised protein family (UPF0497)	[more]
AT2G28370.1	4.4e-32	50.33	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	1.2e-26	43.71	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 8..136 e-value: 4.4E-23 score: 81.7
None	No IPR available	PANTHER	PTHR32021:SF5	CASP-LIKE PROTEIN 5B3	coord: 1..150
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 1..150

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G017180.1	Lsi05G017180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane