Lsi05G016860 (gene) Bottle gourd (USVL1VR-Ls) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTCCAAGTCAAATAAAACCAGCAGATAAATCAAACCCAACCGCTATATAAACCCACTTCCCCCATACAAAAATTATTACAAGAGCTTCCCAAACACAGAGAAAAAAAAAAATCCAAAGAAAAAGCTCTATCAACACAAGGATGTCTACAACATGCAAAGGTACATCAGTAAATAACACTATTAAGCCCTCGTTATGAAAAAATTAATTAATATATGGTTTTGTGTGTTTCACGTTTAGGAAAGAGTTCATGGCCAGAGTTGGTTGGTAAGGCAGGAACAGAAGCAGAGAAGATTATTGAGAAGGAGAATCCATTGGTGGATGCTATTATTGTTGATGAAGGATCAATGGTGATTCTCGATGTTAGGTGCGATAGGGTTTGGGTCTGGGTAGATTTCAAAACAGGCATCGTCACTACCACTCCTTTCATTGGTTAATGTTTTATATGTGTTTGTTCCTACAACACATGAATATATAATATTATTTCAATAAGGTGTTTGTCTTTTTTTCTTTTTCTTTTTCTGAAAGATGTTTGTAATGTTGTGTTTGTTGTAATAAAAATATTTGTTATGTATTATGGT AAAATTCCAAGTCAAATAAAACCAGCAGATAAATCAAACCCAACCGCTATATAAACCCACTTCCCCCATACAAAAATTATTACAAGAGCTTCCCAAACACAGAGAAAAAAAAAAATCCAAAGAAAAAGCTCTATCAACACAAGGATGTCTACAACATGCAAAGGAAAGAGTTCATGGCCAGAGTTGGTTGGTAAGGCAGGAACAGAAGCAGAGAAGATTATTGAGAAGGAGAATCCATTGGTGGATGCTATTATTGTTGATGAAGGATCAATGGTGATTCTCGATGTTAGGTGCGATAGGGTTTGGGTCTGGGTAGATTTCAAAACAGGCATCGTCACTACCACTCCTTTCATTGGTTAATGTTTTATATGTGTTTGTTCCTACAACACATGAATATATAATATTATTTCAATAAGGTGTTTGTCTTTTTTTCTTTTTCTTTTTCTGAAAGATGTTTGTAATGTTGTGTTTGTTGTAATAAAAATATTTGTTATGTATTATGGT ATGTCTACAACATGCAAAGGAAAGAGTTCATGGCCAGAGTTGGTTGGTAAGGCAGGAACAGAAGCAGAGAAGATTATTGAGAAGGAGAATCCATTGGTGGATGCTATTATTGTTGATGAAGGATCAATGGTGATTCTCGATGTTAGGTGCGATAGGGTTTGGGTCTGGGTAGATTTCAAAACAGGCATCGTCACTACCACTCCTTTCATTGGTTAA MSTTCKGKSSWPELVGKAGTEAEKIIEKENPLVDAIIVDEGSMVILDVRCDRVWVWVDFKTGIVTTTPFIG Homology
BLAST of Lsi05G016860 vs. ExPASy Swiss-Prot
Match: P19873 (Inhibitor of trypsin and hageman factor OS=Cucurbita maxima OX=3661 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 4.7e-13 Identity = 36/69 (52.17%), Postives = 51/69 (73.91%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy Swiss-Prot
Match: P24076 (Glu S.griseus protease inhibitor OS=Momordica charantia OX=3673 PE=1 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 6.1e-13 Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy Swiss-Prot
Match: P82381 (Proteinase inhibitor OS=Linum usitatissimum OX=4006 PE=1 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 5.2e-12 Identity = 36/69 (52.17%), Postives = 47/69 (68.12%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy Swiss-Prot
Match: P80211 (Trypsin/subtilisin inhibitor OS=Amaranthus caudatus OX=3567 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 2.0e-11 Identity = 36/64 (56.25%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy Swiss-Prot
Match: Q00783 (Proteinase inhibitor 1 OS=Solanum tuberosum OX=4113 PE=3 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 1.3e-07 Identity = 33/68 (48.53%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy TrEMBL
Match: A0A5D3CZE2 (Inhibitor of trypsin and hageman factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001160 PE=3 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 1.7e-26 Identity = 62/71 (87.32%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy TrEMBL
Match: A0A0A0L795 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G142960 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 2.9e-26 Identity = 61/71 (85.92%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy TrEMBL
Match: A0A5D3D207 (Inhibitor of trypsin and hageman factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001170 PE=3 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.4e-20 Identity = 52/71 (73.24%), Postives = 58/71 (81.69%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy TrEMBL
Match: B1ACD2 (Putative protease inhibitor OS=Glycine max OX=3847 GN=100170748 PE=2 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.5e-19 Identity = 52/71 (73.24%), Postives = 55/71 (77.46%), Query Frame = 0
BLAST of Lsi05G016860 vs. ExPASy TrEMBL
Match: A0A6A1W203 (Proteinase inhibitor OS=Morella rubra OX=262757 GN=CJ030_MR3G008408 PE=3 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 3.5e-19 Identity = 51/71 (71.83%), Postives = 59/71 (83.10%), Query Frame = 0
BLAST of Lsi05G016860 vs. NCBI nr
Match: KAA0049295.1 (inhibitor of trypsin and hageman factor-like [Cucumis melo var. makuwa] >TYK17263.1 inhibitor of trypsin and hageman factor-like [Cucumis melo var. makuwa]) HSP 1 Score: 127.9 bits (320), Expect = 3.5e-26 Identity = 62/71 (87.32%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Lsi05G016860 vs. NCBI nr
Match: KAG6582359.1 (hypothetical protein SDJN03_22361, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 127.9 bits (320), Expect = 3.5e-26 Identity = 61/71 (85.92%), Postives = 64/71 (90.14%), Query Frame = 0
BLAST of Lsi05G016860 vs. NCBI nr
Match: XP_004134090.1 (glu S.griseus protease inhibitor [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 6.0e-26 Identity = 61/71 (85.92%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Lsi05G016860 vs. NCBI nr
Match: KAE8650342.1 (hypothetical protein Csa_009611 [Cucumis sativus]) HSP 1 Score: 127.1 bits (318), Expect = 6.0e-26 Identity = 61/71 (85.92%), Postives = 63/71 (88.73%), Query Frame = 0
BLAST of Lsi05G016860 vs. NCBI nr
Match: KAG6582360.1 (hypothetical protein SDJN03_22362, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 109.0 bits (271), Expect = 1.7e-20 Identity = 53/69 (76.81%), Postives = 57/69 (82.61%), Query Frame = 0
BLAST of Lsi05G016860 vs. TAIR 10
Match: AT2G38870.1 (Serine protease inhibitor, potato inhibitor I-type family protein ) HSP 1 Score: 67.0 bits (162), Expect = 6.9e-12 Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = 0
BLAST of Lsi05G016860 vs. TAIR 10
Match: AT5G43580.1 (Serine protease inhibitor, potato inhibitor I-type family protein ) HSP 1 Score: 65.9 bits (159), Expect = 1.5e-11 Identity = 34/73 (46.58%), Postives = 51/73 (69.86%), Query Frame = 0
BLAST of Lsi05G016860 vs. TAIR 10
Match: AT5G43570.1 (Serine protease inhibitor, potato inhibitor I-type family protein ) HSP 1 Score: 62.0 bits (149), Expect = 2.2e-10 Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0
BLAST of Lsi05G016860 vs. TAIR 10
Match: AT3G46860.1 (Serine protease inhibitor, potato inhibitor I-type family protein ) HSP 1 Score: 48.9 bits (115), Expect = 1.9e-06 Identity = 29/64 (45.31%), Postives = 38/64 (59.38%), Query Frame = 0
BLAST of Lsi05G016860 vs. TAIR 10
Match: AT3G50020.1 (Serine protease inhibitor, potato inhibitor I-type family protein ) HSP 1 Score: 43.1 bits (100), Expect = 1.1e-04 Identity = 27/67 (40.30%), Postives = 37/67 (55.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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