Lsi05G016630 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G016630
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	Auxin-responsive protein
Location	chr05: 24300871 .. 24301748 (+)
RNA-Seq Expression	Lsi05G016630
Synteny	Lsi05G016630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GGGAGTCCAAGATCAACGGTCCTATATTCCTCCACGTGGCGAAATCCCATTAGTGAGGAGCTTGATAAGACATGCACATGCAGCCACACGCTACACAAACTTCCACGCACCTTAATATTATTTCTCTCTCAAACCCCCCAACCCAATTTTCCAAATTATTCATAACATAAAAGAGAGAGAATTCTGAAGAACAACAAGAAAAGTGGCAACGCAAACTAAAAAAGCTTTCAAATTTTCTCTGGGTTTTGTCTAAGCTTATTGCCGGAAGAAGAATTTTCCATGGAGGTTAGCCGGAAAATGGTCAACATGCTGGAAACTGATCTTTGTCTCGGCCTCCCCGGTGGCGGCGGTGGTGGCGGAGGAGAGCCGGAAACTCCCAAAGCTAATGGAAAAAGAGGGTTCTCTGAAACCGTTGATCTGAAACTCAATATCCAATCTAAGCCTGGAGTTACAGTCGATCTGACTGATCCACAGAATAATAATACTTCAACTGATGAGGAGAATCTCATAAGCTCTAAAGATCCTGCAAAGCCACCTGCCAAGTATGTTTCTTCTATCTTTGAGTTTAATTAAGATTTTTTTTTTTAAAAAAAAGTATGTTAAGTAATAATTAAGGGTTGGATGGGATGGGTGAATATTTTAGAGCACAAGTTGTGGGATGGCCACCGGTGCGGTCTTACCGGAAGAATGCAATGTCTCAAAAGAGCCCTGACGGCGGAGAAAAAGGCGGAAGCAGCGGTGGCTCGGCTATGTTTGTCAAAGTTTGTATGGATGGCGCACCTTATCTGCGAAAGGTGGACCTGAAGATGTACAAAAGCTACCAAGAGCTCTCCAACGCCTTAGCCAAGATGTTCAGCTCCTTTACCATGGCCGGTTAG

mRNA sequence

GGGAGTCCAAGATCAACGGTCCTATATTCCTCCACGTGGCGAAATCCCATTAGTGAGGAGCTTGATAAGACATGCACATGCAGCCACACGCTACACAAACTTCCACGCACCTTAATATTATTTCTCTCTCAAACCCCCCAACCCAATTTTCCAAATTATTCATAACATAAAAGAGAGAGAATTCTGAAGAACAACAAGAAAAGTGGCAACGCAAACTAAAAAAGCTTTCAAATTTTCTCTGGGTTTTGTCTAAGCTTATTGCCGGAAGAAGAATTTTCCATGGAGGTTAGCCGGAAAATGGTCAACATGCTGGAAACTGATCTTTGTCTCGGCCTCCCCGGTGGCGGCGGTGGTGGCGGAGGAGAGCCGGAAACTCCCAAAGCTAATGGAAAAAGAGGGTTCTCTGAAACCGTTGATCTGAAACTCAATATCCAATCTAAGCCTGGAGTTACAGTCGATCTGACTGATCCACAGAATAATAATACTTCAACTGATGAGGAGAATCTCATAAGCTCTAAAGATCCTGCAAAGCCACCTGCCAAAGCACAAGTTGTGGGATGGCCACCGGTGCGGTCTTACCGGAAGAATGCAATGTCTCAAAAGAGCCCTGACGGCGGAGAAAAAGGCGGAAGCAGCGGTGGCTCGGCTATGTTTGTCAAAGTTTGTATGGATGGCGCACCTTATCTGCGAAAGGTGGACCTGAAGATGTACAAAAGCTACCAAGAGCTCTCCAACGCCTTAGCCAAGATGTTCAGCTCCTTTACCATGGCCGGTTAG

Coding sequence (CDS)

ATGGAGGTTAGCCGGAAAATGGTCAACATGCTGGAAACTGATCTTTGTCTCGGCCTCCCCGGTGGCGGCGGTGGTGGCGGAGGAGAGCCGGAAACTCCCAAAGCTAATGGAAAAAGAGGGTTCTCTGAAACCGTTGATCTGAAACTCAATATCCAATCTAAGCCTGGAGTTACAGTCGATCTGACTGATCCACAGAATAATAATACTTCAACTGATGAGGAGAATCTCATAAGCTCTAAAGATCCTGCAAAGCCACCTGCCAAAGCACAAGTTGTGGGATGGCCACCGGTGCGGTCTTACCGGAAGAATGCAATGTCTCAAAAGAGCCCTGACGGCGGAGAAAAAGGCGGAAGCAGCGGTGGCTCGGCTATGTTTGTCAAAGTTTGTATGGATGGCGCACCTTATCTGCGAAAGGTGGACCTGAAGATGTACAAAAGCTACCAAGAGCTCTCCAACGCCTTAGCCAAGATGTTCAGCTCCTTTACCATGGCCGGTTAG

Protein sequence

MEVSRKMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSGGSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG

Homology

[Close]

BLAST of Lsi05G016630 vs. ExPASy Swiss-Prot
Match: Q38832 (Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2)

HSP 1 Score: 167.2 bits (422), Expect = 1.6e-40
Identity = 99/160 (61.88%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 8   VNMLETDLCLGLPGGGGGGGGEPETPKANG---KRGFSETVDLKLNIQSKPGVTVDLTDP 67
           +N+ ET+LCLGLP    GG    E+P  +G   KRGFSETVDLKLN+QS     VDL   
Sbjct: 1   MNLKETELCLGLP----GGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDL--- 60

Query: 68  QNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAM-SQKSPDGGEKGGSSGGSA 127
            N N +  E+  +  KDP+KPPAKAQVVGWPPVR+YRKN M +QKS +  E   S GG+ 
Sbjct: 61  -NTNGAPKEKTFL--KDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTV 120

Query: 128 MFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
            FVKV MDGAPYLRKVDLKMY SY++LS+ALAKMFSSFTM
Sbjct: 121 AFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTM 150

[Close]

BLAST of Lsi05G016630 vs. ExPASy Swiss-Prot
Match: Q38825 (Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1)

HSP 1 Score: 162.2 bits (409), Expect = 5.2e-39
Identity = 96/167 (57.49%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 6   KMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQ 65
           +++N+  T+LCLGLP GG      P       KRGFSETVDL LN+QS    +VDL    
Sbjct: 4   QLMNLKATELCLGLP-GGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDL---- 63

Query: 66  NNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGG------EKGGSS 125
             N S   +   + KDP+KPPAKAQVVGWPPVR+YRKN M+Q+    G      EK G+ 
Sbjct: 64  -KNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNF 123

Query: 126 GGSAM---FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
           GG A     VKV MDGAPYLRKVDLKMYKSYQ+LS+ALAKMFSSFTM
Sbjct: 124 GGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM 164

[Close]

BLAST of Lsi05G016630 vs. ExPASy Swiss-Prot
Match: P93830 (Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=2)

HSP 1 Score: 158.7 bits (400), Expect = 5.7e-38
Identity = 92/158 (58.23%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 8   VNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQNN 67
           +N+ ET+LCLGLP      GG+   P    KRGFSETVDLKLN+ ++P    + +   + 
Sbjct: 7   LNLRETELCLGLP------GGDTVAPVTGNKRGFSETVDLKLNLNNEP-ANKEGSTTHDV 66

Query: 68  NTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAM--SQKSPDGGEKGGSSGGSAMF 127
            T   +E     KDPAKPPAKAQVVGWPPVRSYRKN M   QKS  G E       +A F
Sbjct: 67  VTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPE-------AAAF 126

Query: 128 VKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
           VKV MDGAPYLRK+DL+MYKSY ELSNAL+ MFSSFTM
Sbjct: 127 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTM 150

[Close]

BLAST of Lsi05G016630 vs. ExPASy Swiss-Prot
Match: O24407 (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.2e-34
Identity = 90/172 (52.33%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 7   MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQN 66
           M+N   T+L LGLPGG  GG       K NGKRGFSETVDLKLN+ S    +V   D +N
Sbjct: 1   MINFEATELRLGLPGGNHGG---EMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLEN 60

Query: 67  NNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGE-------KGGSS 126
                        +   KPPAKAQVVGWPPVRS+RKN MS + P  G+         GSS
Sbjct: 61  -----------MKEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSS 120

Query: 127 GGSA--------MFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
           G ++         +VKV MDGAPYLRK+DLK+YK+YQ+LSNAL+KMFSSFT+
Sbjct: 121 GATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTI 158

[Close]

BLAST of Lsi05G016630 vs. ExPASy Swiss-Prot
Match: P13089 (Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 2.7e-32
Identity = 86/164 (52.44%), Postives = 102/164 (62.20%), Query Frame = 0


Query: 12  ETDLCLGLPGGGGGGGGEPETPKANGKRGFSE-----------TVDLKLNIQSKPGVT-- 71
           ET+L LGLPG GG             KRGFSE           TVDL LN+ SK   T  
Sbjct: 5   ETELRLGLPGNGG------TEEVLIRKRGFSETETGHEDESATTVDLMLNLSSKEAATTA 64

Query: 72  VDLTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGS 131
               DP + + +  +E  +   DPAKPPAK QVVGWPPVRS+RKN ++ +   G E   +
Sbjct: 65  AAAADPTDKHKTLPKEKTLLPADPAKPPAKTQVVGWPPVRSFRKNMLAVQKSVGEESEKN 124

Query: 132 SGGSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFT 163
           S  +A FVKV MDGAPYLRKVDLKMYKSY+ELS++L KMFSSFT
Sbjct: 125 SSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFT 162

[Close]

BLAST of Lsi05G016630 vs. ExPASy TrEMBL
Match: A0A5A7U4W3 (Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G001030 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.5e-76
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MEVSRKMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60
           MEVSRKMVNMLETDLCLGLP    GGG EPETPKANGKRGFSETVDLKLNIQSK GVTVD
Sbjct: 1   MEVSRKMVNMLETDLCLGLP----GGGAEPETPKANGKRGFSETVDLKLNIQSKTGVTVD 60

Query: 61  LTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSG 120
           LT P+N++TSTDEENLI+SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPD GEKGGSSG
Sbjct: 61  LT-PKNSDTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDSGEKGGSSG 120

Query: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG
Sbjct: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 160

[Close]

BLAST of Lsi05G016630 vs. ExPASy TrEMBL
Match: A0A0A0LA18 (Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G143570 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.5e-76
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MEVSRKMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60
           MEVSRKMVNMLETDLCLGLP    GGG EPETPKANGKRGFSETVDLKLNIQSKPGVTVD
Sbjct: 1   MEVSRKMVNMLETDLCLGLP----GGGAEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60

Query: 61  LTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSG 120
           LT PQNN+TSTDEE+LI+SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKS + GEKGGSSG
Sbjct: 61  LT-PQNNDTSTDEESLIASKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSSEAGEKGGSSG 120

Query: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG
Sbjct: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 160

[Close]

BLAST of Lsi05G016630 vs. ExPASy TrEMBL
Match: A0A1S3AWR5 (Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103483649 PE=3 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.5e-76
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MEVSRKMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60
           MEVSRKMVNMLETDLCLGLP    GGG EPETPKANGKRGFSETVDLKLNIQSK GVTVD
Sbjct: 1   MEVSRKMVNMLETDLCLGLP----GGGAEPETPKANGKRGFSETVDLKLNIQSKTGVTVD 60

Query: 61  LTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSG 120
           LT P+N++TSTDEENLI+SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPD GEKGGSSG
Sbjct: 61  LT-PKNSDTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDSGEKGGSSG 120

Query: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG
Sbjct: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 160

[Close]

BLAST of Lsi05G016630 vs. ExPASy TrEMBL
Match: A0A6J1F9R0 (Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111442089 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.5e-65
Identity = 141/160 (88.12%), Postives = 144/160 (90.00%), Query Frame = 0


Query: 7   MVNMLETDLCLGLP-GGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQ 66
           MVNMLETDLCLGLP GGGGGGGGEPETPK NGKRGFSETVDLKLNIQSKP VTVDL+  Q
Sbjct: 1   MVNMLETDLCLGLPGGGGGGGGGEPETPKGNGKRGFSETVDLKLNIQSKPVVTVDLSTTQ 60

Query: 67  NNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSGGSAMF 126
           N   STD E+L SSKDPAKPPAKAQVVGWPPVRSYRKNAMSQK+PD GEKG    GSAMF
Sbjct: 61  NMK-STDSEDL-SSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKNPDAGEKG---SGSAMF 120

Query: 127 VKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           VKVCMDGAPYLRKVDLK YKSYQELSNALAKMFSSFTMAG
Sbjct: 121 VKVCMDGAPYLRKVDLKTYKSYQELSNALAKMFSSFTMAG 155

[Close]

BLAST of Lsi05G016630 vs. ExPASy TrEMBL
Match: A0A6J1IHI5 (Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111473080 PE=3 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 2.2e-64
Identity = 139/159 (87.42%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 7   MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQN 66
           MVNMLETDLCLGLP   GGGGGEPETPK NGKRGFSETVDLKLNIQSKP VTVDL+  QN
Sbjct: 1   MVNMLETDLCLGLP---GGGGGEPETPKGNGKRGFSETVDLKLNIQSKPVVTVDLSTTQN 60

Query: 67  NNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSGGSAMFV 126
              STD E+L SSKDPAKPPAKAQVVGWPPVRSYRKNAMSQK+PDGGEKG    GSAMFV
Sbjct: 61  MK-STDSEDL-SSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKNPDGGEKG---SGSAMFV 120

Query: 127 KVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           KVCMDGAPYLRKVDLK YKSYQELSNALAKMFSSFTMAG
Sbjct: 121 KVCMDGAPYLRKVDLKTYKSYQELSNALAKMFSSFTMAG 151

[Close]

BLAST of Lsi05G016630 vs. NCBI nr
Match: XP_038877086.1 (auxin-responsive protein IAA14-like [Benincasa hispida])

HSP 1 Score: 307.4 bits (786), Expect = 7.6e-80
Identity = 160/165 (96.97%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MEVSRKMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60
           MEVSRKMVNMLETDLCLGLP  GGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD
Sbjct: 1   MEVSRKMVNMLETDLCLGLP--GGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60

Query: 61  LTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSG 120
           LT PQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSS 
Sbjct: 61  LT-PQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSS 120

Query: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           GSAMFVKVCMDGAPYLRKVDLKMYKSYQELS ALAKMFSSFTMAG
Sbjct: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSTALAKMFSSFTMAG 162

[Close]

BLAST of Lsi05G016630 vs. NCBI nr
Match: XP_008438588.1 (PREDICTED: auxin-responsive protein IAA14 [Cucumis melo])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MEVSRKMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60
           MEVSRKMVNMLETDLCLGLP    GGG EPETPKANGKRGFSETVDLKLNIQSK GVTVD
Sbjct: 1   MEVSRKMVNMLETDLCLGLP----GGGAEPETPKANGKRGFSETVDLKLNIQSKTGVTVD 60

Query: 61  LTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSG 120
           LT P+N++TSTDEENLI+SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPD GEKGGSSG
Sbjct: 61  LT-PKNSDTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDSGEKGGSSG 120

Query: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG
Sbjct: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 160

[Close]

BLAST of Lsi05G016630 vs. NCBI nr
Match: XP_004134096.1 (auxin-responsive protein IAA14 [Cucumis sativus] >KGN56916.1 hypothetical protein Csa_010900 [Cucumis sativus])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MEVSRKMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60
           MEVSRKMVNMLETDLCLGLP    GGG EPETPKANGKRGFSETVDLKLNIQSKPGVTVD
Sbjct: 1   MEVSRKMVNMLETDLCLGLP----GGGAEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60

Query: 61  LTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSG 120
           LT PQNN+TSTDEE+LI+SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKS + GEKGGSSG
Sbjct: 61  LT-PQNNDTSTDEESLIASKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSSEAGEKGGSSG 120

Query: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG
Sbjct: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 160

[Close]

BLAST of Lsi05G016630 vs. NCBI nr
Match: KAA0049306.1 (auxin-responsive protein IAA14 [Cucumis melo var. makuwa] >TYK17252.1 auxin-responsive protein IAA14 [Cucumis melo var. makuwa])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 153/165 (92.73%), Postives = 157/165 (95.15%), Query Frame = 0


Query: 1   MEVSRKMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVD 60
           MEVSRKMVNMLETDLCLGLP    GGG EPETPKANGKRGFSETVDLKLNIQSK GVTVD
Sbjct: 1   MEVSRKMVNMLETDLCLGLP----GGGAEPETPKANGKRGFSETVDLKLNIQSKTGVTVD 60

Query: 61  LTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSSG 120
           LT P+N++TSTDEENLI+SKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPD GEKGGSSG
Sbjct: 61  LT-PKNSDTSTDEENLITSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDSGEKGGSSG 120

Query: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
           GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG
Sbjct: 121 GSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 160

[Close]

BLAST of Lsi05G016630 vs. NCBI nr
Match: KAG7028855.1 (Auxin-responsive protein IAA14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 268.9 bits (686), Expect = 3.0e-68
Identity = 146/166 (87.95%), Postives = 150/166 (90.36%), Query Frame = 0


Query: 1   MEVSRKMVNMLETDLCLGLP-GGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTV 60
           +EV RKMVNMLETDLCLGLP GGGGGGGGEPETPK NGKRGFSETVDLKLNIQSKP VTV
Sbjct: 28  IEVCRKMVNMLETDLCLGLPGGGGGGGGGEPETPKGNGKRGFSETVDLKLNIQSKPVVTV 87

Query: 61  DLTDPQNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGEKGGSS 120
           DL+  QN   STD E+L SSKDPAKPPAKAQVVGWPPVRSYRKNAMSQK+PDGGEKG   
Sbjct: 88  DLSTTQNMK-STDSEDL-SSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKNPDGGEKG--- 147

Query: 121 GGSAMFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTMAG 166
            GSAMFVKVCMDGAPYLRKVDLK YKSYQELSNALAKMFSSFTMAG
Sbjct: 148 SGSAMFVKVCMDGAPYLRKVDLKTYKSYQELSNALAKMFSSFTMAG 188

[Close]

BLAST of Lsi05G016630 vs. TAIR 10
Match: AT4G14550.1 (indole-3-acetic acid inducible 14 )

HSP 1 Score: 167.2 bits (422), Expect = 1.1e-41
Identity = 99/160 (61.88%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 8   VNMLETDLCLGLPGGGGGGGGEPETPKANG---KRGFSETVDLKLNIQSKPGVTVDLTDP 67
           +N+ ET+LCLGLP    GG    E+P  +G   KRGFSETVDLKLN+QS     VDL   
Sbjct: 1   MNLKETELCLGLP----GGTETVESPAKSGVGNKRGFSETVDLKLNLQSNKQGHVDL--- 60

Query: 68  QNNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAM-SQKSPDGGEKGGSSGGSA 127
            N N +  E+  +  KDP+KPPAKAQVVGWPPVR+YRKN M +QKS +  E   S GG+ 
Sbjct: 61  -NTNGAPKEKTFL--KDPSKPPAKAQVVGWPPVRNYRKNVMANQKSGEAEEAMSSGGGTV 120

Query: 128 MFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
            FVKV MDGAPYLRKVDLKMY SY++LS+ALAKMFSSFTM
Sbjct: 121 AFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTM 150

[Close]

BLAST of Lsi05G016630 vs. TAIR 10
Match: AT3G23050.2 (indole-3-acetic acid 7 )

HSP 1 Score: 162.2 bits (409), Expect = 3.7e-40
Identity = 96/167 (57.49%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 6   KMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQ 65
           +++N+  T+LCLGLP GG      P       KRGFSETVDL LN+QS    +VDL    
Sbjct: 4   QLMNLKATELCLGLP-GGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDL---- 63

Query: 66  NNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGG------EKGGSS 125
             N S   +   + KDP+KPPAKAQVVGWPPVR+YRKN M+Q+    G      EK G+ 
Sbjct: 64  -KNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNF 123

Query: 126 GGSAM---FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
           GG A     VKV MDGAPYLRKVDLKMYKSYQ+LS+ALAKMFSSFTM
Sbjct: 124 GGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM 164

[Close]

BLAST of Lsi05G016630 vs. TAIR 10
Match: AT3G23050.1 (indole-3-acetic acid 7 )

HSP 1 Score: 162.2 bits (409), Expect = 3.7e-40
Identity = 96/167 (57.49%), Postives = 112/167 (67.07%), Query Frame = 0


Query: 6   KMVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQ 65
           +++N+  T+LCLGLP GG      P       KRGFSETVDL LN+QS    +VDL    
Sbjct: 4   QLMNLKATELCLGLP-GGAEAVESPAKSAVGSKRGFSETVDLMLNLQSNKEGSVDL---- 63

Query: 66  NNNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGG------EKGGSS 125
             N S   +   + KDP+KPPAKAQVVGWPPVR+YRKN M+Q+    G      EK G+ 
Sbjct: 64  -KNVSAVPKEKTTLKDPSKPPAKAQVVGWPPVRNYRKNMMTQQKTSSGAEEASSEKAGNF 123

Query: 126 GGSAM---FVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
           GG A     VKV MDGAPYLRKVDLKMYKSYQ+LS+ALAKMFSSFTM
Sbjct: 124 GGGAAGAGLVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMFSSFTM 164

[Close]

BLAST of Lsi05G016630 vs. TAIR 10
Match: AT1G04250.1 (AUX/IAA transcriptional regulator family protein )

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-39
Identity = 92/158 (58.23%), Postives = 107/158 (67.72%), Query Frame = 0


Query: 8   VNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQNN 67
           +N+ ET+LCLGLP      GG+   P    KRGFSETVDLKLN+ ++P    + +   + 
Sbjct: 7   LNLRETELCLGLP------GGDTVAPVTGNKRGFSETVDLKLNLNNEP-ANKEGSTTHDV 66

Query: 68  NTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAM--SQKSPDGGEKGGSSGGSAMF 127
            T   +E     KDPAKPPAKAQVVGWPPVRSYRKN M   QKS  G E       +A F
Sbjct: 67  VTFDSKEKSACPKDPAKPPAKAQVVGWPPVRSYRKNVMVSCQKSSGGPE-------AAAF 126

Query: 128 VKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
           VKV MDGAPYLRK+DL+MYKSY ELSNAL+ MFSSFTM
Sbjct: 127 VKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTM 150

[Close]

BLAST of Lsi05G016630 vs. TAIR 10
Match: AT3G04730.1 (indoleacetic acid-induced protein 16 )

HSP 1 Score: 146.7 bits (369), Expect = 1.6e-35
Identity = 90/172 (52.33%), Postives = 108/172 (62.79%), Query Frame = 0


Query: 7   MVNMLETDLCLGLPGGGGGGGGEPETPKANGKRGFSETVDLKLNIQSKPGVTVDLTDPQN 66
           M+N   T+L LGLPGG  GG       K NGKRGFSETVDLKLN+ S    +V   D +N
Sbjct: 1   MINFEATELRLGLPGGNHGG---EMAGKNNGKRGFSETVDLKLNLSSTAMDSVSKVDLEN 60

Query: 67  NNTSTDEENLISSKDPAKPPAKAQVVGWPPVRSYRKNAMSQKSPDGGE-------KGGSS 126
                        +   KPPAKAQVVGWPPVRS+RKN MS + P  G+         GSS
Sbjct: 61  -----------MKEKVVKPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSS 120

Query: 127 GGSA--------MFVKVCMDGAPYLRKVDLKMYKSYQELSNALAKMFSSFTM 164
           G ++         +VKV MDGAPYLRK+DLK+YK+YQ+LSNAL+KMFSSFT+
Sbjct: 121 GATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTI 158

The following BLAST results are available for this feature:

BLAST of Lsi05G016630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38832	1.6e-40	61.88	Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=...	[more]
Q38825	5.2e-39	57.49	Auxin-responsive protein IAA7 OS=Arabidopsis thaliana OX=3702 GN=IAA7 PE=1 SV=1	[more]
P93830	5.7e-38	58.23	Auxin-responsive protein IAA17 OS=Arabidopsis thaliana OX=3702 GN=IAA17 PE=1 SV=...	[more]
O24407	2.2e-34	52.33	Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=...	[more]
P13089	2.7e-32	52.44	Auxin-induced protein AUX28 OS=Glycine max OX=3847 GN=AUX28 PE=2 SV=1	[more]

BLAST of Lsi05G016630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U4W3	5.5e-76	92.73	Auxin-responsive protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0LA18	5.5e-76	92.73	Auxin-responsive protein OS=Cucumis sativus OX=3659 GN=Csa_3G143570 PE=3 SV=1	[more]
A0A1S3AWR5	5.5e-76	92.73	Auxin-responsive protein OS=Cucumis melo OX=3656 GN=LOC103483649 PE=3 SV=1	[more]
A0A6J1F9R0	1.5e-65	88.13	Auxin-responsive protein OS=Cucurbita moschata OX=3662 GN=LOC111442089 PE=3 SV=1	[more]
A0A6J1IHI5	2.2e-64	87.42	Auxin-responsive protein OS=Cucurbita maxima OX=3661 GN=LOC111473080 PE=3 SV=1	[more]

BLAST of Lsi05G016630 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877086.1	7.6e-80	96.97	auxin-responsive protein IAA14-like [Benincasa hispida]	[more]
XP_008438588.1	1.1e-75	92.73	PREDICTED: auxin-responsive protein IAA14 [Cucumis melo]	[more]
XP_004134096.1	1.1e-75	92.73	auxin-responsive protein IAA14 [Cucumis sativus] >KGN56916.1 hypothetical protei...	[more]
KAA0049306.1	1.1e-75	92.73	auxin-responsive protein IAA14 [Cucumis melo var. makuwa] >TYK17252.1 auxin-resp...	[more]
KAG7028855.1	3.0e-68	87.95	Auxin-responsive protein IAA14, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]

BLAST of Lsi05G016630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G14550.1	1.1e-41	61.88	indole-3-acetic acid inducible 14	[more]
AT3G23050.2	3.7e-40	57.49	indole-3-acetic acid 7	[more]
AT3G23050.1	3.7e-40	57.49	indole-3-acetic acid 7	[more]
AT1G04250.1	4.1e-39	58.23	AUX/IAA transcriptional regulator family protein	[more]
AT3G04730.1	1.6e-35	52.33	indoleacetic acid-induced protein 16	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR033389	AUX/IAA domain	PFAM	PF02309	AUX_IAA	coord: 35..163 e-value: 6.1E-39 score: 134.3
None	No IPR available	GENE3D	3.10.20.90		coord: 118..165 e-value: 7.9E-16 score: 59.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..76
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..121
None	No IPR available	PANTHER	PTHR31734:SF89	AUXIN-RESPONSIVE PROTEIN IAA14	coord: 5..164
None	No IPR available	SUPERFAMILY	54277	CAD & PB1 domains	coord: 119..163
IPR003311	AUX/IAA protein	PANTHER	PTHR31734	AUXIN-RESPONSIVE PROTEIN IAA17	coord: 5..164
IPR000270	PB1 domain	PROSITE	PS51745	PB1	coord: 123..165 score: 13.104177

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G016630.1	Lsi05G016630.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding