Lsi05G016500 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview


Name	Lsi05G016500
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
Description	guanine nucleotide-binding protein subunit gamma 2-like
Location	chr05: 24154969 .. 24156616 (+)
RNA-Seq Expression	Lsi05G016500
Synteny	Lsi05G016500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAATGGAAGTAAGACAAAAGGCAGAGAGAATAAGAGAATCATGAGAAAGCATACAAACTTTTCAAACAAATTCACTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCTTTCACTTTCTCTCTGACACACAACAAACCATTACAAAAACCCCACTTCCGTCGCTCTCTTCTCCCTTTCAGATCCTTCCATTTCTCTTCTTTTCTTCTTTAATTCTCTCTTTTTATCATCCCTTCCTCTGTTTTCCCTCTGCAATTACAATCTTAGTGTTTATGGCGGAAGCTGCTGCTGTTCCCATTCCCCACCGGATTCACTCCTTATCCGCCATCGACGCCGTCGGAAAACATAGGTTGCTTGCCGAATTCAAGCGCCTCGAGCAAGAGGCTAGATTTCTAGAGGTTCTTCTTTCTCTCTTCTGTTTTTACTTCTTTTACTTTCATTTCAAATGGGATATTACTGAAATAATTCATGGGTTTGATTCTGATTTTTTTTTTTTTTTTTTTTTTCATATTTCTTAAAAGAAAACATTCAATAAATCATAGCTGACAGTAATATCTAAGCTTAATTTTTTAAAAAACTAACATCTCCTATTATTACTATTAGTTTTTGAAAATGATGTTCACACTACTACTTTCACTTGTTATCTGTTTTCACTCATTTTTTCAAAAATCAAAATATAGTTTTTAAAAACCTTTTGTTGTTTTTAGAATTTGACTAGTAATTCAAGTGTTTTCTTAAAACTATTTCTGGAAAATTTGGAGGAAAGAAGTATAAATTTTAACGAAGCCTAAATAGTTATGAAACGGGTCAAAATAGTTTATGTTTGTTTGTGGGTGCTGCCACTCTGTCTCTGATGTTGCCAAACAACACAAATTGAGATTGGAACTAAGATATACAATGAAACTGGAAATTATGAAATTCCACTGTGTTGAATTTGCAGGAGGAGCTGGACCAGTTAGAAAAATTGGACAAAGCATCAGCATCATGCAAAGAGTAAGTATGATTTGACAATAAATTTCATTATTTGTTCCATGAAAAATCCCAACATTTTGAGGGTTTCTTTCTTTTTACATTCAATCTGAACTTACCAGGTTGTTGAGCAGTGTAGAAATGAGATCAGACCCTCTACTTCCAGAGTATGCTTCTTTACTTAAAATTTTCTAATTCATTTCTCATCTTCAAAAATCATGATCTGATCCAATTTTTTTTTCAGAACTCTCGGCCCGGTAAATCCAGCTTGGGATCGATGGTTCGAAGGCCCGAAAGATTCGAATCGATGCCAATGTCGATGCAGATGCTGGATTTTGTAACCATTGTGTTTGATAATATATATATATATATATATATAATATATATATATATATATATATATTATATATATATATTTCTGGTTTCCACAGAGTGTGAAGCCCTGATTGCCTAATGGCCAATGAATTTGAAAGCTCTATCATGTGATGATCTTTGGCAATCTCAAGTTTCACCCATTTCTCAGTAACAGGACTTTCACATTAATGAATGTTCATGTTGTGGTTTTCTAAAACATTTTTTAGGGGTTTGGTTGGTAATTGGCATAGCCTAGCTATAGAATATAGACTCAGTTTGATTTGTTTCTTTATTATTATTAGAAGAAACGCAAATGAGGTACGTTATCC

mRNA sequence

CAATGGAAGTAAGACAAAAGGCAGAGAGAATAAGAGAATCATGAGAAAGCATACAAACTTTTCAAACAAATTCACTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCTTTCACTTTCTCTCTGACACACAACAAACCATTACAAAAACCCCACTTCCGTCGCTCTCTTCTCCCTTTCAGATCCTTCCATTTCTCTTCTTTTCTTCTTTAATTCTCTCTTTTTATCATCCCTTCCTCTGTTTTCCCTCTGCAATTACAATCTTAGTGTTTATGGCGGAAGCTGCTGCTGTTCCCATTCCCCACCGGATTCACTCCTTATCCGCCATCGACGCCGTCGGAAAACATAGGTTGCTTGCCGAATTCAAGCGCCTCGAGCAAGAGGCTAGATTTCTAGAGGAGGAGCTGGACCAGTTAGAAAAATTGGACAAAGCATCAGCATCATGCAAAGAGTTGTTGAGCAGTGTAGAAATGAGATCAGACCCTCTACTTCCAGAAACTCTCGGCCCGGTAAATCCAGCTTGGGATCGATGGTTCGAAGGCCCGAAAGATTCGAATCGATGCCAATGTCGATGCAGATGCTGGATTTTGTAACCATTGTGTTTGATAATATATATATATATATATATATATTATATATATATATTTCTGGTTTCCACAGAGTGTGAAGCCCTGATTGCCTAATGGCCAATGAATTTGAAAGCTCTATCATGTGATGATCTTTGGCAATCTCAAGTTTCACCCATTTCTCAGTAACAGGACTTTCACATTAATGAATGTTCATGTTGTGGTTTTCTAAAACATTTTTTAGGGGTTTGGTTGGTAATTGGCATAGCCTAGCTATAGAATATAGACTCAGTTTGATTTGTTTCTTTATTATTATTAGAAGAAACGCAAATGAGGTACGTTATCC

Coding sequence (CDS)

ATGAGAAAGCATACAAACTTTTCAAACAAATTCACTCTTTCTTTCTTTCTTTCTTTCTTTTTTCCCTTTCACTTTCTCTCTGACACACAACAAACCATTACAAAAACCCCACTTCCGTCGCTCTCTTCTCCCTTTCAGATCCTTCCATTTCTCTTCTTTTCTTCTTTAATTCTCTCTTTTTATCATCCCTTCCTCTGTTTTCCCTCTGCAATTACAATCTTAGTGTTTATGGCGGAAGCTGCTGCTGTTCCCATTCCCCACCGGATTCACTCCTTATCCGCCATCGACGCCGTCGGAAAACATAGGTTGCTTGCCGAATTCAAGCGCCTCGAGCAAGAGGCTAGATTTCTAGAGGAGGAGCTGGACCAGTTAGAAAAATTGGACAAAGCATCAGCATCATGCAAAGAGTTGTTGAGCAGTGTAGAAATGAGATCAGACCCTCTACTTCCAGAAACTCTCGGCCCGGTAAATCCAGCTTGGGATCGATGGTTCGAAGGCCCGAAAGATTCGAATCGATGCCAATGTCGATGCAGATGCTGGATTTTGTAA

Protein sequence

MRKHTNFSNKFTLSFFLSFFFPFHFLSDTQQTITKTPLPSLSSPFQILPFLFFSSLILSFYHPFLCFPSAITILVFMAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL

Homology

[Close]

BLAST of Lsi05G016500 vs. ExPASy Swiss-Prot
Match: Q93V47 (Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=3702 GN=GG2 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.6e-28
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 95  IDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLPETLG 154
           +D  GKHR+ AE KRLEQEARFLEEEL+QLEK+D ASASCKE L SV+ + DPLLPET G
Sbjct: 17  VDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLLPETTG 76

Query: 155 PVNPAWDRWFEGPKDSNRCQC 176
           PVN  WD+WFEGPK++ RC C
Sbjct: 77  PVNATWDQWFEGPKEAKRCGC 97

[Close]

BLAST of Lsi05G016500 vs. ExPASy Swiss-Prot
Match: B8AN27 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica OX=39946 GN=RGG1 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.5e-23
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 96  DAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLPETLGP 155
           D  G+HR+ AE K+LEQEARFLEEEL++L+K DK SA+ +EL+ + E ++DPLLP T GP
Sbjct: 11  DTRGRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQELMVTAESKADPLLPVTTGP 70

Query: 156 VNPAWDRWFEGPKDSNRCQCRCRCWIL 183
              +WDRWFEGP+D      RC+CW L
Sbjct: 71  ACQSWDRWFEGPQDLR----RCKCWFL 93

[Close]

BLAST of Lsi05G016500 vs. ExPASy Swiss-Prot
Match: Q75WU1 (Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RGG1 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 7.5e-23
Identity = 50/87 (57.47%), Postives = 65/87 (74.71%), Query Frame = 0


Query: 96  DAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLPETLGP 155
           D  G+HR+ AE K+LEQEARFLEEEL++L+K DK SA+ +EL+ + E ++DPLLP T GP
Sbjct: 11  DTRGRHRIQAELKKLEQEARFLEEELEELDKTDKVSAALQELMVTAESKADPLLPVTTGP 70

Query: 156 VNPAWDRWFEGPKDSNRCQCRCRCWIL 183
              +WDRWFEGP+D      RC+CW L
Sbjct: 71  ACQSWDRWFEGPQDLR----RCKCWFL 93

[Close]

BLAST of Lsi05G016500 vs. ExPASy Swiss-Prot
Match: Q9FDX9 (Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=3702 GN=GG1 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.1e-18
Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 99  GKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLPETLGPVNP 158
           GKHR+LAE  R+EQE  FLE+EL ++E  D  S  C+ELLS +E   DPLLP T GP+N 
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 159 AWDRWFEGPKDSNRCQC 176
            WDRWFEGP     C+C
Sbjct: 79  GWDRWFEGPNGGEGCRC 95

[Close]

BLAST of Lsi05G016500 vs. ExPASy Swiss-Prot
Match: A2X0N9 (Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica OX=39946 GN=RGG2 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.0e-15
Identity = 37/80 (46.25%), Postives = 60/80 (75.00%), Query Frame = 0


Query: 91  SLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLP 150
           ++ ++  VGKHRL A   RL+QE + L++EL++LE ++ ASA+C+ +++S E +SDPLLP
Sbjct: 57  AMRSVGYVGKHRLSAAIARLDQELQSLQDELNELETMEPASAACQGVITSTEGKSDPLLP 116

Query: 151 ETLGPVNPAWDRWFEGPKDS 171
            T+GP N +W+RWF+  + S
Sbjct: 117 VTIGPENASWERWFQRVRSS 136

[Close]

BLAST of Lsi05G016500 vs. ExPASy TrEMBL
Match: A0A6J1IY50 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita maxima OX=3661 GN=LOC111479574 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 9.1e-48
Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 77  MAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKE 136
           MAE AAVPIPHRI SLSA+DAVGKHRLLAE KRLEQEARFLEEEL+QLEKLDKASASCKE
Sbjct: 1   MAE-AAVPIPHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKE 60

Query: 137 LLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL 183
           LL  VEMRSDPLLPETL PVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LLGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Lsi05G016500 vs. ExPASy TrEMBL
Match: A0A1S3AXG2 (guanine nucleotide-binding protein subunit gamma 2 OS=Cucumis melo OX=3656 GN=LOC103483662 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 1.2e-47
Identity = 115/181 (63.54%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 2   RKHTNFSNKFTLSFFLSFFFPFHFLSDTQQTITKTPLPSLSSPFQILPFLFFSSLILSFY 61
           +KHTNF  + +L F LS   PFHF         K       +   I  F F         
Sbjct: 3   KKHTNFFKQNSL-FLLS---PFHFSLTHNDNNNKEEKKKKKTQLPIALFHF--------- 62

Query: 62  HPFLCFPSAITILVFMAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEEL 121
                     ++L  MAE AAVPIPHRI SLSA+DAVGKHRLLAE KRLEQEARFLEEEL
Sbjct: 63  ----------SLLPLMAE-AAVPIPHRILSLSALDAVGKHRLLAEMKRLEQEARFLEEEL 122

Query: 122 DQLEKLDKASASCKELLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWI 181
           +QLEKLDKASASCKELL SVEMRSDPLLPETLGPVNP WD+WFEGPKDSNRC CRCRCWI
Sbjct: 123 EQLEKLDKASASCKELLGSVEMRSDPLLPETLGPVNPVWDQWFEGPKDSNRCHCRCRCWI 159

Query: 182 L 183
           L
Sbjct: 183 L 159

[Close]

BLAST of Lsi05G016500 vs. ExPASy TrEMBL
Match: A0A6J1EA89 (guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita moschata OX=3662 GN=LOC111432136 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 7.7e-47
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 77  MAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKE 136
           MAE AAVPI HRI SLSA+DAVGKHRLLAE KRLEQEARFLEEEL+QLEKLDKASASCKE
Sbjct: 1   MAE-AAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKE 60

Query: 137 LLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL 183
           LL  VEMRSDPLLPETL PVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LLGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Lsi05G016500 vs. ExPASy TrEMBL
Match: A0A5A7U729 (Guanine nucleotide-binding protein subunit gamma 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00900 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.7e-46
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 77  MAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKE 136
           MAE AAVPIPHR  SLSA+DAVGKHRLLAE KRLEQEARFLEEEL+QLEKLDKASASCKE
Sbjct: 1   MAE-AAVPIPHRTLSLSALDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKE 60

Query: 137 LLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL 183
           LL SVEMRSDPLLPETLGPVNP WD+WFEGPKDSNRC CRCRCWIL
Sbjct: 61  LLGSVEMRSDPLLPETLGPVNPVWDQWFEGPKDSNRCHCRCRCWIL 105

[Close]

BLAST of Lsi05G016500 vs. ExPASy TrEMBL
Match: A0A0A0L7C3 (G protein gamma domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G144190 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 1.7e-46
Identity = 95/106 (89.62%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 77  MAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKE 136
           MAE AAVPIPHRI SLSA+DAVGKHRLLAE KRLEQEARFLEEEL+QLEKLDKAS SCKE
Sbjct: 1   MAE-AAVPIPHRILSLSALDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASTSCKE 60

Query: 137 LLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL 183
           LL S+EMRSDPLLPETLGPVNP WDRWFEGPKDSNRC C+CRCWIL
Sbjct: 61  LLGSIEMRSDPLLPETLGPVNPVWDRWFEGPKDSNRCHCQCRCWIL 105

[Close]

BLAST of Lsi05G016500 vs. NCBI nr
Match: XP_038902255.1 (guanine nucleotide-binding protein subunit gamma 2 [Benincasa hispida])

HSP 1 Score: 201.4 bits (511), Expect = 6.5e-48
Identity = 97/106 (91.51%), Postives = 103/106 (97.17%), Query Frame = 0


Query: 77  MAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKE 136
           MAE AA+PIPHRIHSLSA+DA+GKHRLLAE KRL+QEARFLEEEL+QLEKLDKASASCKE
Sbjct: 1   MAE-AALPIPHRIHSLSALDALGKHRLLAEMKRLDQEARFLEEELEQLEKLDKASASCKE 60

Query: 137 LLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL 183
           LL SVEMRSDPLLPETLGPVNPAWDRWFEGPK+SNRCQCRCRCWIL
Sbjct: 61  LLDSVEMRSDPLLPETLGPVNPAWDRWFEGPKNSNRCQCRCRCWIL 105

[Close]

BLAST of Lsi05G016500 vs. NCBI nr
Match: XP_022980058.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita maxima])

HSP 1 Score: 199.9 bits (507), Expect = 1.9e-47
Identity = 98/106 (92.45%), Postives = 100/106 (94.34%), Query Frame = 0


Query: 77  MAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKE 136
           MAE AAVPIPHRI SLSA+DAVGKHRLLAE KRLEQEARFLEEEL+QLEKLDKASASCKE
Sbjct: 1   MAE-AAVPIPHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKE 60

Query: 137 LLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL 183
           LL  VEMRSDPLLPETL PVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LLGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Lsi05G016500 vs. NCBI nr
Match: XP_008438601.2 (PREDICTED: guanine nucleotide-binding protein subunit gamma 2 [Cucumis melo])

HSP 1 Score: 199.5 bits (506), Expect = 2.5e-47
Identity = 115/181 (63.54%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 2   RKHTNFSNKFTLSFFLSFFFPFHFLSDTQQTITKTPLPSLSSPFQILPFLFFSSLILSFY 61
           +KHTNF  + +L F LS   PFHF         K       +   I  F F         
Sbjct: 3   KKHTNFFKQNSL-FLLS---PFHFSLTHNDNNNKEEKKKKKTQLPIALFHF--------- 62

Query: 62  HPFLCFPSAITILVFMAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEEL 121
                     ++L  MAE AAVPIPHRI SLSA+DAVGKHRLLAE KRLEQEARFLEEEL
Sbjct: 63  ----------SLLPLMAE-AAVPIPHRILSLSALDAVGKHRLLAEMKRLEQEARFLEEEL 122

Query: 122 DQLEKLDKASASCKELLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWI 181
           +QLEKLDKASASCKELL SVEMRSDPLLPETLGPVNP WD+WFEGPKDSNRC CRCRCWI
Sbjct: 123 EQLEKLDKASASCKELLGSVEMRSDPLLPETLGPVNPVWDQWFEGPKDSNRCHCRCRCWI 159

Query: 182 L 183
           L
Sbjct: 183 L 159

[Close]

BLAST of Lsi05G016500 vs. NCBI nr
Match: XP_022924721.1 (guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita moschata])

HSP 1 Score: 196.8 bits (499), Expect = 1.6e-46
Identity = 97/106 (91.51%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 77  MAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKE 136
           MAE AAVPI HRI SLSA+DAVGKHRLLAE KRLEQEARFLEEEL+QLEKLDKASASCKE
Sbjct: 1   MAE-AAVPIAHRIQSLSAVDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKE 60

Query: 137 LLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL 183
           LL  VEMRSDPLLPETL PVNPAWDRWFEGPKDSNRCQCRCRCWIL
Sbjct: 61  LLGCVEMRSDPLLPETLAPVNPAWDRWFEGPKDSNRCQCRCRCWIL 105

[Close]

BLAST of Lsi05G016500 vs. NCBI nr
Match: KAA0049319.1 (guanine nucleotide-binding protein subunit gamma 2 [Cucumis melo var. makuwa] >TYK17239.1 guanine nucleotide-binding protein subunit gamma 2 [Cucumis melo var. makuwa])

HSP 1 Score: 195.7 bits (496), Expect = 3.5e-46
Identity = 96/106 (90.57%), Postives = 99/106 (93.40%), Query Frame = 0


Query: 77  MAEAAAVPIPHRIHSLSAIDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKE 136
           MAE AAVPIPHR  SLSA+DAVGKHRLLAE KRLEQEARFLEEEL+QLEKLDKASASCKE
Sbjct: 1   MAE-AAVPIPHRTLSLSALDAVGKHRLLAEMKRLEQEARFLEEELEQLEKLDKASASCKE 60

Query: 137 LLSSVEMRSDPLLPETLGPVNPAWDRWFEGPKDSNRCQCRCRCWIL 183
           LL SVEMRSDPLLPETLGPVNP WD+WFEGPKDSNRC CRCRCWIL
Sbjct: 61  LLGSVEMRSDPLLPETLGPVNPVWDQWFEGPKDSNRCHCRCRCWIL 105

[Close]

BLAST of Lsi05G016500 vs. TAIR 10
Match: AT3G22942.1 (G-protein gamma subunit 2 )

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29
Identity = 58/81 (71.60%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 95  IDAVGKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLPETLG 154
           +D  GKHR+ AE KRLEQEARFLEEEL+QLEK+D ASASCKE L SV+ + DPLLPET G
Sbjct: 17  VDTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLLPETTG 76

Query: 155 PVNPAWDRWFEGPKDSNRCQC 176
           PVN  WD+WFEGPK++ RC C
Sbjct: 77  PVNATWDQWFEGPKEAKRCGC 97

[Close]

BLAST of Lsi05G016500 vs. TAIR 10
Match: AT3G63420.1 (Ggamma-subunit 1 )

HSP 1 Score: 94.7 bits (234), Expect = 7.9e-20
Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 99  GKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLPETLGPVNP 158
           GKHR+LAE  R+EQE  FLE+EL ++E  D  S  C+ELLS +E   DPLLP T GP+N 
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 159 AWDRWFEGPKDSNRCQC 176
            WDRWFEGP     C+C
Sbjct: 79  GWDRWFEGPNGGEGCRC 95

[Close]

BLAST of Lsi05G016500 vs. TAIR 10
Match: AT3G63420.2 (Ggamma-subunit 1 )

HSP 1 Score: 94.7 bits (234), Expect = 7.9e-20
Identity = 44/77 (57.14%), Postives = 53/77 (68.83%), Query Frame = 0


Query: 99  GKHRLLAEFKRLEQEARFLEEELDQLEKLDKASASCKELLSSVEMRSDPLLPETLGPVNP 158
           GKHR+LAE  R+EQE  FLE+EL ++E  D  S  C+ELLS +E   DPLLP T GP+N 
Sbjct: 19  GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPLTNGPLNL 78

Query: 159 AWDRWFEGPKDSNRCQC 176
            WDRWFEGP     C+C
Sbjct: 79  GWDRWFEGPNGGEGCRC 95

The following BLAST results are available for this feature:

BLAST of Lsi05G016500 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93V47	1.6e-28	71.60	Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis thaliana OX=37...	[more]
B8AN27	7.5e-23	57.47	Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. indica...	[more]
Q75WU1	7.5e-23	57.47	Guanine nucleotide-binding protein subunit gamma 1 OS=Oryza sativa subsp. japoni...	[more]
Q9FDX9	1.1e-18	57.14	Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis thaliana OX=37...	[more]
A2X0N9	2.0e-15	46.25	Guanine nucleotide-binding protein subunit gamma 2 OS=Oryza sativa subsp. indica...	[more]

BLAST of Lsi05G016500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IY50	9.1e-48	92.45	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita maxima OX=3...	[more]
A0A1S3AXG2	1.2e-47	63.54	guanine nucleotide-binding protein subunit gamma 2 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1EA89	7.7e-47	91.51	guanine nucleotide-binding protein subunit gamma 2-like OS=Cucurbita moschata OX...	[more]
A0A5A7U729	1.7e-46	90.57	Guanine nucleotide-binding protein subunit gamma 2 OS=Cucumis melo var. makuwa O...	[more]
A0A0A0L7C3	1.7e-46	89.62	G protein gamma domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G14...	[more]

BLAST of Lsi05G016500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038902255.1	6.5e-48	91.51	guanine nucleotide-binding protein subunit gamma 2 [Benincasa hispida]	[more]
XP_022980058.1	1.9e-47	92.45	guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita maxima]	[more]
XP_008438601.2	2.5e-47	63.54	PREDICTED: guanine nucleotide-binding protein subunit gamma 2 [Cucumis melo]	[more]
XP_022924721.1	1.6e-46	91.51	guanine nucleotide-binding protein subunit gamma 2-like [Cucurbita moschata]	[more]
KAA0049319.1	3.5e-46	90.57	guanine nucleotide-binding protein subunit gamma 2 [Cucumis melo var. makuwa] >T...	[more]

BLAST of Lsi05G016500 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22942.1	1.1e-29	71.60	G-protein gamma subunit 2	[more]
AT3G63420.1	7.9e-20	57.14	Ggamma-subunit 1	[more]
AT3G63420.2	7.9e-20	57.14	Ggamma-subunit 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..127
None	No IPR available	COILS	Coil	Coil	coord: 182..182
None	No IPR available	SMART	SM01224	G_gamma_2	coord: 104..182 e-value: 7.0E-13 score: 58.8
None	No IPR available	PANTHER	PTHR32378:SF12	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 2	coord: 79..181
None	No IPR available	PANTHER	PTHR32378	GUANINE NUCLEOTIDE-BINDING PROTEIN SUBUNIT GAMMA 3	coord: 79..181
IPR015898	G-protein gamma-like domain	PFAM	PF00631	G-gamma	coord: 108..182 e-value: 2.4E-14 score: 53.1

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G016500.1	Lsi05G016500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007186	G protein-coupled receptor signaling pathway